>Q99P72:RTN4_MOUSE Reticulon-4 - Mus musculus (Mouse)|
          Length = 1162
 Score = 35.8 bits (81), Expect = 0.22
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +1

Query: 241 ADDAVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGA-----SRGAAPSPD 405
           A  A  LP  AA    +LPED      PP PAG +PL  P   P        RG+    +
Sbjct: 111 AASAPSLPPAAAVLPSKLPEDDEPPARPPAPAGASPLAEPAAPPSTPAAPKRRGSGSVDE 170

Query: 406 TLRCCRCTSASVV 444
           TL      S  V+
Sbjct: 171 TLFALPAASEPVI 183

>Q96AX9:MIB2_HUMAN E3 ubiquitin-protein ligase MIB2 - Homo sapiens (Human)|
          Length = 1013

 Score = 34.7 bits (78), Expect = 0.48
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
 Frame = +1

Query: 331  PAGRAPLRVPVRVPGASRGAAPSPDTLRCCRCTSASVVVLVTRC--------CASQIHMC 486
            P  R  L  P  V     GAAP P+   C  C+  +++VL + C        CA ++  C
Sbjct: 862  PGPRQTLGTPNTVTNLHVGAAPGPEAAECLVCSELALLVLFSPCQHRTVCEECARRMKKC 921

Query: 487  VLTAVL 504
            +   V+
Sbjct: 922  IRCQVV 927

>Q5R4P8:ZN574_PONPY Zinc finger protein 574 - Pongo pygmaeus (Orangutan)|
          Length = 895

 Score = 33.5 bits (75), Expect = 1.1
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +1

Query: 250 AVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRG---AAPSPDTLRCC 420
           A +L A  AAH+   P +  A  EPP P      R PV  P A  G   A+P+P   R  
Sbjct: 679 AARLQAHEAAHAAAGPGEVLA-KEPPAPRAPRATRAPVASPAALGGTATASPAPARRRGL 737

Query: 421 RCT 429
            C+
Sbjct: 738 ECS 740

>P49765:VEGFB_HUMAN Vascular endothelial growth factor B precursor - Homo sapiens|
           (Human)
          Length = 207

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 18/52 (34%), Positives = 20/52 (38%)
 Frame = +1

Query: 244 DDAVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPS 399
           D AV+    A  H    P     WD  P     A +  P   PG S  AAPS
Sbjct: 130 DSAVKPDRAATPHHRPQPRSVPGWDSAPGAPSPADITHPTPAPGPSAHAAPS 181

>Q9JK11:RTN4_RAT Reticulon-4 - Rattus norvegicus (Rat)|
          Length = 1163

 Score = 33.1 bits (74), Expect = 1.4
 Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
 Frame = +1

Query: 241 ADDAVQLPADAAAHSLQLPED--AAAWDEPPQPAGRAPLRVPVRVPGA-----SRGAAPS 399
           A  A  LP  AA    +LPED    A   PP PAG +PL  P   P        RG+   
Sbjct: 113 AAPAPSLPPAAAVLPSKLPEDDEPPARPPPPPPAGASPLAEPAAPPSTPAAPKRRGSGSV 172

Query: 400 PDTLRCCRCTSASVV 444
            +TL      S  V+
Sbjct: 173 DETLFALPAASEPVI 187

>P04474:PRP3_RAT Acidic proline-rich protein PRP33 precursor - Rattus norvegicus|
           (Rat)
          Length = 206

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 296 QKMPPPGMNHHSPPAGHHYG 355
           ++ PP G NH  PP GHH+G
Sbjct: 78  ERPPPHGGNHQRPPPGHHHG 97

>Q5VV17:OTUD1_HUMAN OTU domain-containing protein 1 - Homo sapiens (Human)|
          Length = 481

 Score = 32.7 bits (73), Expect = 1.8
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 322 PPQPAGRAPLRVPVRVPGASRGAAPSPDTLRC 417
           P  PA   P +V ++ PGA+ GAAP P+T  C
Sbjct: 23  PAPPAAATPFKVSLQPPGAA-GAAPEPETGEC 53

>Q43402:OLNB6_BRANA Oleosin-B6 - Brassica napus (Rape)|
          Length = 375

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 24/57 (42%), Positives = 26/57 (45%)
 Frame = +1

Query: 226 PAAGAADDAVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAP 396
           PAA AA  A   PA  AA +   PED AA   P  PA  A    P   P  +  AAP
Sbjct: 216 PAAPAAPAAPAAPAAPAAPAA--PEDPAAPAAPEAPATPAAPPAPAAAPAPAAPAAP 270

>O02786:MSX1_BOVIN Homeobox protein MSX-1 - Bos taurus (Bovine)|
          Length = 297

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 223 RPAAGAADDAVQLPADAAAHS----LQLPEDAAAWDEPPQPAGRAP-LRVPVRVPGASRG 387
           RP + AA DA   P      S    L+LPEDA    E P+   R P ++ P   P  SR 
Sbjct: 93  RPGSLAAPDAPSSPRPLGHFSVGGLLKLPEDALVKAESPEKPERTPWMQNPRFSPPPSRR 152

Query: 388 AAPSPDTLR 414
            +P   TLR
Sbjct: 153 LSPPACTLR 161

>P23253:TCNA_TRYCR Sialidase - Trypanosoma cruzi|
          Length = 1162

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 226  PAAGAADDAVQLPADAAAHSL-QLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPSP 402
            PA  +A      PAD++AH     P D++A   P  PAG +     + +P  +  +  S 
Sbjct: 1083 PADSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPAGSSANGTVLILPDGAALSTFSG 1142

Query: 403  DTLRCCRC 426
              L  C C
Sbjct: 1143 GGLLLCAC 1150



 Score = 30.4 bits (67), Expect = 9.1
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 226  PAAGAADDAVQLPADAAAHSL-QLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPS 399
            PA  +A      PAD++AHS    P D++A   P  PA  +    P     +S  + PS
Sbjct: 1035 PADSSAHGTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPS 1093

>Q03297:PER_DROWI Period circadian protein - Drosophila willistoni (Fruit fly)|
          Length = 1093

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +1

Query: 214  FSHRPAAGAADDAVQLPADAA--AHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRG 387
            F   PAA AA   V  P   A  A+ +QLPE A+      QP   AP     +  GA   
Sbjct: 906  FYTHPAAAAATAMVYQPVPFAGVANPMQLPEQASKNVYTTQPVMVAPPTATNKTQGAFHS 965

Query: 388  AAPSPDTLRCCRCTS 432
              P+P      + TS
Sbjct: 966  ITPAPPQRPSSQATS 980

>Q13875:MOBP_HUMAN Myelin-associated oligodendrocyte basic protein - Homo sapiens|
           (Human)
          Length = 183

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 310 AWDEPPQPAGRAPLRVPVRVPGASRGAAP 396
           A   PPQ + + P   P+R PGASRG +P
Sbjct: 148 AKQRPPQKSKQQPRSSPLRGPGASRGGSP 176

>O35485:VEGFB_RAT Vascular endothelial growth factor B precursor - Rattus norvegicus|
           (Rat)
          Length = 207

 Score = 31.2 bits (69), Expect = 5.3
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 244 DDAVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPS 399
           + AV+    A  H    P    +WD  P  +  A +  P   PG S  AAPS
Sbjct: 130 ESAVKPDRVAIPHHRPQPRSVLSWDSAPGASSPADIIHPTPAPGPSAHAAPS 181

>Q29RK0:ZN574_BOVIN Zinc finger protein 574 - Bos taurus (Bovine)|
          Length = 896

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
 Frame = +1

Query: 250 AVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPSPDT------- 408
           A +L A  AAH+   P +  A  EPP P      R P+  P     AAP+          
Sbjct: 679 AARLQAHEAAHAAAGPGEVLA-KEPPAPRAPRAARTPITSPTTLGSAAPAAPAAPARRRG 737

Query: 409 LRCCRC 426
           L C  C
Sbjct: 738 LECSEC 743

>Q0VCC5:REPI1_BOVIN Replication initiator 1 - Bos taurus (Bovine)|
          Length = 559

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +1

Query: 220 HRPAAGAADDAVQLPADAAAHSLQLPEDAAAWDEPPQPAGRAPLRVPVRVPGASRGAAPS 399
           H+ + G+A    Q PA A   +           EPP      P  VPV  PG    AA +
Sbjct: 314 HKRSEGSAQGGPQPPASAPERT----------PEPPPEPAPEPAEVPVG-PGQPSAAAEA 362

Query: 400 PDTLRCC 420
           P +L  C
Sbjct: 363 PPSLHTC 369

>P13297:MSX1_MOUSE Homeobox protein MSX-1 - Mus musculus (Mouse)|
          Length = 293

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 223 RPAAGAADDAVQLPADAAAHS----LQLPEDAAAWDEPPQPAGRAP-LRVPVRVPGASRG 387
           RP +  A DA   P      S    L+LPEDA    E P+   R P ++ P   P  +R 
Sbjct: 93  RPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALVKAESPEKLDRTPWMQSPRFSPPPARR 152

Query: 388 AAPSPDTLR 414
            +P   TLR
Sbjct: 153 LSPPACTLR 161

>Q10571:MN1_HUMAN Probable tumor suppressor protein MN1 - Homo sapiens (Human)|
          Length = 1319

 Score = 30.4 bits (67), Expect = 9.1
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
 Frame = +1

Query: 259 LPADAAAHSLQLPEDAAAWDEPPQPAG-----RAPLRVPVRVPGASR-GAAPSP 402
           LPAD   H   L         PP P G     R PL+ P+R+PG     A PSP
Sbjct: 651 LPADCGPHDPSLAP-------PPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSP 697


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 123,352,452
Number of extensions: 2542436
Number of successful extensions: 7965
Number of sequences better than 10.0: 17
Number of HSP's gapped: 7921
Number of HSP's successfully gapped: 18
Length of query: 279
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 167
Effective length of database: 69,965,399
Effective search space: 11684221633
Effective search space used: 11684221633
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)