ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf113e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 131 8e-27
2dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 131 8e-27
3dbj|AK062687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 3e-11
4emb|CT027665.2| Medicago truncatula chromosome 5 clone mth2-69e1... 76 4e-10
5dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone... 68 1e-07
6gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete s... 66 4e-07
7ref|NM_001066739.1| Oryza sativa (japonica cultivar-group) Os07g... 62 6e-06
8dbj|AK229290.1| Arabidopsis thaliana mRNA for hypothetical prote... 56 4e-04
9ref|NM_101250.2| Arabidopsis thaliana catalytic/ hydrolase (AT1G... 56 4e-04
10gb|BT014841.1| Arabidopsis thaliana At1g13820 gene, complete cds 56 4e-04
11gb|BT012536.1| Arabidopsis thaliana At1g13820 gene, complete cds 56 4e-04
12gb|AC068197.4|AC068197 Genomic sequence for Arabidopsis thaliana... 56 4e-04
13gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, co... 46 0.37
14gb|AC187710.3| Callithrix jacchus BAC clone CH259-11H12 from chr... 44 1.5
15gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 44 1.5
16ref|XM_589159.2| PREDICTED: Bos taurus similar to ATP-binding ca... 44 1.5
17gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Can... 44 1.5
18emb|AL021332.1|HS398A12 Human DNA sequence from clone RP3-398A12... 44 1.5
19gb|AC023512.28|AC023512 Homo sapiens 12 BAC RP11-1018J11 (Roswel... 44 1.5
20gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Canc... 44 1.5
21gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 42 5.8
22gb|AC113097.11| Mus musculus chromosome 18, clone RP23-314E8, co... 42 5.8
23gb|AC136716.12| Mus musculus, clone RP23-42E21, complete sequence 42 5.8
24gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, com... 42 5.8
25emb|BX054121.1|CNS09DX9 Single read from an extremity of a full-... 42 5.8
26emb|BX013699.1|CNS08IQF Single read from an extremity of a full-... 42 5.8
27gb|AF191289.1|AF191289 Trichuris trichiura microsatellite ttstr1 42 5.8
28gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 5.8 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043
 Score =  131 bits (66), Expect = 8e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                            
Query: 315      acagttcttgtttagagtggagatacacgtacccattactggaggaggctggactggagg 374
                |||||||||||||||||||||| ||||| ||||| ||  |||||||||||||||||||||
Sbjct: 24529816 acagttcttgtttagagtggaggtacacctacccgttgttggaggaggctggactggagg 24529757

                                                  
Query: 375      cttgggctgtcgatattcttggatggggcttctc 408
                |||||||||| || ||||||||||||||||||||
Sbjct: 24529756 cttgggctgtggacattcttggatggggcttctc 24529723



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                            
Query: 746      cagattggccatctgcattgccgacttccttggtgggaagatgctactgttgattttatg 805
                |||||||||| ||| || |||| ||||||||||||||||||||||  |||||||||||||
Sbjct: 24527956 cagattggccgtctacactgcctacttccttggtgggaagatgctcttgttgattttatg 24527897

                                                         
Query: 806      cttagtggtggttataatgtcataagcgaaataaaacaggt 846
                 | | ||| |||||||||||| ||| | ||||||| |||||
Sbjct: 24527896 atgaatgggggttataatgtcctaaaccaaataaatcaggt 24527856



 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                            
Query: 465      agttttggagttcctacatcaaaaggccaatggtgttagttggacccagccttggtgcag 524
                |||| ||||| |||||||| | |||||| ||||||||||||||||| || || ||||| |
Sbjct: 24529113 agttctggagatcctacattagaaggcctatggtgttagttggaccaagtctcggtgctg 24529054

                                                        
Query: 525      ctgttgccattgattttgcagtcagctatccagaagcggt 564
                ||||||| ||||||||| | |||| |||||| ||||||||
Sbjct: 24529053 ctgttgctattgattttactgtcaactatccggaagcggt 24529014



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 562      ggtgtcaaaattggtgttcattggtgctagtgtatataccgagggcacaagagatctgac 621
                |||||||||| || | |||||| |||| ||||||||| | ||||||||||||||| ||||
Sbjct: 24528820 ggtgtcaaaactgatcttcattagtgcaagtgtatatgctgagggcacaagagatatgac 24528761

                                              
Query: 622      gagcttccctaaatttgttccatatgctgg 651
                 ||  | |||| ||| ||||||||||||||
Sbjct: 24528760 aagaatgcctagattcgttccatatgctgg 24528731



 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                            
Query: 911      aggttgcacaaagatctcccaaatgcaatcctaaggcaggtgcgtcactgtggtcatctt 970
                ||||||||| | || |||||| |||||||  |||||||||| ||  | ||||||||| ||
Sbjct: 24527226 aggttgcaccaggaactcccagatgcaattttaaggcaggtacgggagtgtggtcatatt 24527167

                                           
Query: 971      ccccatgtcgaaaagccaagggaagtg 997
                || ||||| ||||||||||| ||||||
Sbjct: 24527166 cctcatgttgaaaagccaagtgaagtg 24527140



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 851      cataaatgtctggtcttatggggagaggatgatgaaataataagtaacaaacaagcatat 910
                |||||||| ||| | |||||||||||||| |||| ||| || || |||||||||||||||
Sbjct: 24527500 cataaatgcctgattttatggggagaggaggatggaatcattagcaacaaacaagcatat 24527441



 Score = 50.1 bits (25), Expect = 0.024
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 221      actggcttctccaggggcccaatactgagcagctgcgtgagaccactgaagcagcag 277
                ||||||||||||  | |||| ||||| |||||||||||||| || || |||||||||
Sbjct: 24530351 actggcttctcccagagcccgatacttagcagctgcgtgaggccgctcaagcagcag 24530295
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0018H10
          Length = 135879

 Score =  131 bits (66), Expect = 8e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 315   acagttcttgtttagagtggagatacacgtacccattactggaggaggctggactggagg 374
             |||||||||||||||||||||| ||||| ||||| ||  |||||||||||||||||||||
Sbjct: 23110 acagttcttgtttagagtggaggtacacctacccgttgttggaggaggctggactggagg 23051

                                               
Query: 375   cttgggctgtcgatattcttggatggggcttctc 408
             |||||||||| || ||||||||||||||||||||
Sbjct: 23050 cttgggctgtggacattcttggatggggcttctc 23017



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 746   cagattggccatctgcattgccgacttccttggtgggaagatgctactgttgattttatg 805
             |||||||||| ||| || |||| ||||||||||||||||||||||  |||||||||||||
Sbjct: 21250 cagattggccgtctacactgcctacttccttggtgggaagatgctcttgttgattttatg 21191

                                                      
Query: 806   cttagtggtggttataatgtcataagcgaaataaaacaggt 846
              | | ||| |||||||||||| ||| | ||||||| |||||
Sbjct: 21190 atgaatgggggttataatgtcctaaaccaaataaatcaggt 21150



 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 465   agttttggagttcctacatcaaaaggccaatggtgttagttggacccagccttggtgcag 524
             |||| ||||| |||||||| | |||||| ||||||||||||||||| || || ||||| |
Sbjct: 22407 agttctggagatcctacattagaaggcctatggtgttagttggaccaagtctcggtgctg 22348

                                                     
Query: 525   ctgttgccattgattttgcagtcagctatccagaagcggt 564
             ||||||| ||||||||| | |||| |||||| ||||||||
Sbjct: 22347 ctgttgctattgattttactgtcaactatccggaagcggt 22308



 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                         
Query: 562   ggtgtcaaaattggtgttcattggtgctagtgtatataccgagggcacaagagatctgac 621
             |||||||||| || | |||||| |||| ||||||||| | ||||||||||||||| ||||
Sbjct: 22114 ggtgtcaaaactgatcttcattagtgcaagtgtatatgctgagggcacaagagatatgac 22055

                                           
Query: 622   gagcttccctaaatttgttccatatgctgg 651
              ||  | |||| ||| ||||||||||||||
Sbjct: 22054 aagaatgcctagattcgttccatatgctgg 22025



 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                         
Query: 911   aggttgcacaaagatctcccaaatgcaatcctaaggcaggtgcgtcactgtggtcatctt 970
             ||||||||| | || |||||| |||||||  |||||||||| ||  | ||||||||| ||
Sbjct: 20520 aggttgcaccaggaactcccagatgcaattttaaggcaggtacgggagtgtggtcatatt 20461

                                        
Query: 971   ccccatgtcgaaaagccaagggaagtg 997
             || ||||| ||||||||||| ||||||
Sbjct: 20460 cctcatgttgaaaagccaagtgaagtg 20434



 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                         
Query: 851   cataaatgtctggtcttatggggagaggatgatgaaataataagtaacaaacaagcatat 910
             |||||||| ||| | |||||||||||||| |||| ||| || || |||||||||||||||
Sbjct: 20794 cataaatgcctgattttatggggagaggaggatggaatcattagcaacaaacaagcatat 20735



 Score = 50.1 bits (25), Expect = 0.024
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 221   actggcttctccaggggcccaatactgagcagctgcgtgagaccactgaagcagcag 277
             ||||||||||||  | |||| ||||| |||||||||||||| || || |||||||||
Sbjct: 23645 actggcttctcccagagcccgatacttagcagctgcgtgaggccgctcaagcagcag 23589
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>dbj|AK062687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H11, full
           insert sequence
          Length = 620

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 902 caagcatataggttgcacaaagatctcccaaatgcaatcctaaggcaggtgcgtcactgt 961
           |||||||||||||||||| | || |||||| |||||||  |||||||||| ||  | |||
Sbjct: 1   caagcatataggttgcaccaggaactcccagatgcaattttaaggcaggtacgggagtgt 60

                                               
Query: 962 ggtcatcttccccatgtcgaaaagccaagggaagtg 997
           |||||| |||| ||||| ||||||||||| ||||||
Sbjct: 61  ggtcatattcctcatgttgaaaagccaagtgaagtg 96
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>emb|CT027665.2| Medicago truncatula chromosome 5 clone mth2-69e15, COMPLETE SEQUENCE
          Length = 130069

 Score = 75.8 bits (38), Expect = 4e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 464   cagttttggagttcctacatcaaaaggccaatggtgttagttggacccagccttggtgca 523
             ||||||||||  |||||||||| |||||||||| | || |||||||| ||||| ||  | 
Sbjct: 62453 cagttttggaagtcctacatcagaaggccaatgatattggttggaccaagcctcggctct 62394

                                                   
Query: 524   gctgttgccattgattttgcagtcagctatccagaagc 561
             |||||||||||||| ||||| ||||  |||||||||||
Sbjct: 62393 gctgttgccattgactttgctgtcaattatccagaagc 62356



 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 773   ccttggtgggaagatgctactgttgattttatgcttagtggtggtta 819
             ||||||||||| |||||||||||||||||||||  |||||| |||||
Sbjct: 61748 ccttggtgggatgatgctactgttgattttatgactagtggcggtta 61702
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>dbj|AP006081.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT32P24, TM0120,
             complete sequence
          Length = 137804

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                         
Query: 464   cagttttggagttcctacatcaaaaggccaatggtgttagttggacccagccttggtgca 523
             ||||||||||  ||||| |||| |||||||||| | || |||||||| ||||||||  | 
Sbjct: 36159 cagttttggaagtcctatatcagaaggccaatgatattggttggaccaagccttggctct 36100

                                                   
Query: 524   gctgttgccattgattttgcagtcagctatccagaagc 561
             |||||||| ||||| ||| ||||||  |||||||||||
Sbjct: 36099 gctgttgcgattgacttttcagtcaattatccagaagc 36062



 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 773   ccttggtgggaagatgctactgttgattttatgcttagtggtggttataatgt 825
             ||||||||||| ||||||||||| |||||||||  |||||||||||| |||||
Sbjct: 34908 ccttggtgggatgatgctactgtggattttatgactagtggtggttacaatgt 34856
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>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence
          Length = 141672

 Score = 65.9 bits (33), Expect = 4e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                         
Query: 461   taccagttttggagttcctacatcaaaaggccaatggtgttagttggacccagccttggt 520
             |||||||||||||  |||||||| |||| ||| ||| | || ||||| || |||||||||
Sbjct: 80423 taccagttttggaaatcctacattaaaaagccgatgatattggttggtccaagccttggt 80482

                                                      
Query: 521   gcagctgttgccattgattttgcagtcagctatccagaagc 561
              | ||||||||||| || |||||| |||  |||||||||||
Sbjct: 80483 tctgctgttgccatcgactttgcaatcaattatccagaagc 80523
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>ref|NM_001066739.1| Oryza sativa (japonica cultivar-group) Os07g0602100 (Os07g0602100)
           mRNA, complete cds
          Length = 611

 Score = 61.9 bits (31), Expect = 6e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 911 aggttgcacaaagatctcccaaatgcaatcctaaggcaggtgcgtcactgtggtcatctt 970
           ||||||||| | || |||||| |||||||  |||||||||| ||  | ||||||||| ||
Sbjct: 1   aggttgcaccaggaactcccagatgcaattttaaggcaggtacgggagtgtggtcatatt 60

                                      
Query: 971 ccccatgtcgaaaagccaagggaagtg 997
           || ||||| ||||||||||| ||||||
Sbjct: 61  cctcatgttgaaaagccaagtgaagtg 87
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>dbj|AK229290.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL16-56-K02
          Length = 1286

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 311 tttgacagttcttgtttagagtggagatacac 342
           ||||| ||||||||||||||||||||||||||
Sbjct: 346 tttgatagttcttgtttagagtggagatacac 377



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 957  actgtggtcatcttccccatgtcgaaaagcc 987
            ||||||| |||||||||||||||||||||||
Sbjct: 989  actgtggacatcttccccatgtcgaaaagcc 1019



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 772 tccttggtgggaagatgctactgttgattttatg 805
           |||||||||||||||||| ||||||  |||||||
Sbjct: 804 tccttggtgggaagatgcaactgttagttttatg 837
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>ref|NM_101250.2| Arabidopsis thaliana catalytic/ hydrolase (AT1G13820) mRNA,
           complete cds
          Length = 1282

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 311 tttgacagttcttgtttagagtggagatacac 342
           ||||| ||||||||||||||||||||||||||
Sbjct: 346 tttgatagttcttgtttagagtggagatacac 377



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 957  actgtggtcatcttccccatgtcgaaaagcc 987
            ||||||| |||||||||||||||||||||||
Sbjct: 989  actgtggacatcttccccatgtcgaaaagcc 1019



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 772 tccttggtgggaagatgctactgttgattttatg 805
           |||||||||||||||||| ||||||  |||||||
Sbjct: 804 tccttggtgggaagatgcaactgttagttttatg 837
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>gb|BT014841.1| Arabidopsis thaliana At1g13820 gene, complete cds
          Length = 1020

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 311 tttgacagttcttgtttagagtggagatacac 342
           ||||| ||||||||||||||||||||||||||
Sbjct: 271 tttgatagttcttgtttagagtggagatacac 302



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 957 actgtggtcatcttccccatgtcgaaaagcc 987
           ||||||| |||||||||||||||||||||||
Sbjct: 914 actgtggacatcttccccatgtcgaaaagcc 944



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 772 tccttggtgggaagatgctactgttgattttatg 805
           |||||||||||||||||| ||||||  |||||||
Sbjct: 729 tccttggtgggaagatgcaactgttagttttatg 762
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>gb|BT012536.1| Arabidopsis thaliana At1g13820 gene, complete cds
          Length = 1247

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 311 tttgacagttcttgtttagagtggagatacac 342
           ||||| ||||||||||||||||||||||||||
Sbjct: 332 tttgatagttcttgtttagagtggagatacac 363



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 957  actgtggtcatcttccccatgtcgaaaagcc 987
            ||||||| |||||||||||||||||||||||
Sbjct: 975  actgtggacatcttccccatgtcgaaaagcc 1005



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 772 tccttggtgggaagatgctactgttgattttatg 805
           |||||||||||||||||| ||||||  |||||||
Sbjct: 790 tccttggtgggaagatgcaactgttagttttatg 823
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>gb|AC068197.4|AC068197 Genomic sequence for Arabidopsis thaliana BAC F16A14 from chromosome I,
             complete sequence
          Length = 99547

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 315   acagttcttgtttagagtggagatacac 342
             ||||||||||||||||||||||||||||
Sbjct: 11474 acagttcttgtttagagtggagatacac 11501



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 957   actgtggtcatcttccccatgtcgaaaagcc 987
             ||||||| |||||||||||||||||||||||
Sbjct: 12775 actgtggacatcttccccatgtcgaaaagcc 12805



 Score = 44.1 bits (22), Expect = 1.5
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 772   tccttggtgggaagatgctactgttgattttatg 805
             |||||||||||||||||| ||||||  |||||||
Sbjct: 12420 tccttggtgggaagatgcaactgttagttttatg 12453
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>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence
          Length = 167945

 Score = 46.1 bits (23), Expect = 0.37
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 878    gatgatgaaataataagtaacaa 900
              |||||||||||||||||||||||
Sbjct: 131977 gatgatgaaataataagtaacaa 131955
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>gb|AC187710.3| Callithrix jacchus BAC clone CH259-11H12 from chromosome unknown,
              complete sequence
          Length = 215441

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 879    atgatgaaataataagtaacaa 900
              ||||||||||||||||||||||
Sbjct: 101539 atgatgaaataataagtaacaa 101560
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 15      gaatgccgctggtctcgatgtg 36
               ||||||||||||||||||||||
Sbjct: 1536493 gaatgccgctggtctcgatgtg 1536472
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>ref|XM_589159.2| PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A,
            member 7 isoform a, transcript variant 1 (LOC511762),
            mRNA
          Length = 6618

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 353  ctggaggaggctggactggagg 374
            ||||||||||||||||||||||
Sbjct: 3943 ctggaggaggctggactggagg 3964
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>gb|AC164662.6| Mus musculus 10 BAC RP24-279D11 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 154482

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 405   tctctaatttagaaacaagacc 426
             ||||||||||||||||||||||
Sbjct: 47062 tctctaatttagaaacaagacc 47041
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>emb|AL021332.1|HS398A12 Human DNA sequence from clone RP3-398A12 on chromosome 6p23-25.1,
             complete sequence
          Length = 90169

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 879   atgatgaaataataagtaacaa 900
             ||||||||||||||||||||||
Sbjct: 49462 atgatgaaataataagtaacaa 49483
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>gb|AC023512.28|AC023512 Homo sapiens 12 BAC RP11-1018J11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186044

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1076  aaaataatactatcttttagac 1097
             ||||||||||||||||||||||
Sbjct: 39576 aaaataatactatcttttagac 39555
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>gb|AC153496.4| Mus musculus 10 BAC RP23-373D1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 149839

 Score = 44.1 bits (22), Expect = 1.5
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 405   tctctaatttagaaacaagacc 426
             ||||||||||||||||||||||
Sbjct: 84067 tctctaatttagaaacaagacc 84088
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>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1031  aaaaaagacaaagcagaataa 1051
             |||||||||||||||||||||
Sbjct: 86797 aaaaaagacaaagcagaataa 86817
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>gb|AC113097.11| Mus musculus chromosome 18, clone RP23-314E8, complete sequence
          Length = 172295

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 775    ttggtgggaagatgctactgt 795
              |||||||||||||||||||||
Sbjct: 141963 ttggtgggaagatgctactgt 141983
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>gb|AC136716.12| Mus musculus, clone RP23-42E21, complete sequence
          Length = 259603

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     ccggtgctgccacatgttccc 64
              |||||||||||||||||||||
Sbjct: 129780 ccggtgctgccacatgttccc 129760
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>gb|AC009630.14| Homo sapiens chromosome 8, clone RP11-360L9, complete sequence
          Length = 219622

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 927    tcccaaatgcaatcctaaggc 947
              |||||||||||||||||||||
Sbjct: 179314 tcccaaatgcaatcctaaggc 179294
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>emb|BX054121.1|CNS09DX9 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC32AF06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 898

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcccaatactgagcagctgcg 257
           |||||||||||||||||||||
Sbjct: 82  gcccaatactgagcagctgcg 62
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>emb|BX013699.1|CNS08IQF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA20CD08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 625

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcccaatactgagcagctgcg 257
           |||||||||||||||||||||
Sbjct: 39  gcccaatactgagcagctgcg 19
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>gb|AF191289.1|AF191289 Trichuris trichiura microsatellite ttstr1
          Length = 446

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 633 aatttgttccatatgctggtgtttt 657
           |||||||||||||||||||| ||||
Sbjct: 102 aatttgttccatatgctggtctttt 126
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>gb|AC152723.3| Ornithorhynchus anatinus chromosome UNK clone OABb-121A1, complete
             sequence
          Length = 142600

 Score = 42.1 bits (21), Expect = 5.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   cactgaagcagcaggagagca 284
             |||||||||||||||||||||
Sbjct: 73691 cactgaagcagcaggagagca 73671


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 279,432,165
Number of extensions: 14889670
Number of successful extensions: 257112
Number of sequences better than 10.0: 28
Number of HSP's gapped: 257112
Number of HSP's successfully gapped: 52
Length of query: 1530
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1507
Effective length of database: 18,503,978,556
Effective search space: 27885495683892
Effective search space used: 27885495683892
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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