| Clone Name | FLbaf113e01 |
|---|---|
| Clone Library Name | barley_pub |
>Q95155:OLF2_CANFA Olfactory receptor-like protein OLF2 - Canis familiaris (Dog)| Length = 311 Score = 35.4 bits (80), Expect = 0.83 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Frame = +2 Query: 731 GFVEFDDVNGKVLTYSAQD-STYKVFDLKNYTLLYSICDKNVQEIKISPGIMLLIYTRTS 907 GF+E ++G ++Y + K+ + +S C ++ + I G ML +Y R S Sbjct: 204 GFIELITLSGLFVSYCYIILAVRKINSAEGRFKAFSTCTSHLTAVAIFQGTMLFMYFRPS 263 Query: 908 SSIPL---KILSIEDGTVLKFFNHLLH--RNKKV 994 SS L KI+S+ V+ N L++ RNK V Sbjct: 264 SSYSLDQDKIISLFYSLVIPMLNPLIYSLRNKDV 297
>Q8NH69:OR5W2_HUMAN Olfactory receptor 5W2 - Homo sapiens (Human)| Length = 310 Score = 33.9 bits (76), Expect = 2.4 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%) Frame = +2 Query: 731 GFVEFDDVNGKVLTYSAQD-STYKVFDLKNYTLLYSICDKNVQEIKISPGIMLLIYTRTS 907 GF+E ++G ++Y S ++ + S C ++ + I G +L +Y R S Sbjct: 204 GFIELSTISGVFISYCYIILSVLEIHSAEGRFKALSTCTSHLSAVAIFQGTLLFMYFRPS 263 Query: 908 SSIPL---KILSIEDGTVLKFFNHLLH--RNKKV-DFIEQFNEKLL 1027 SS L K+ S+ V+ N L++ RNK V + +++ K+L Sbjct: 264 SSYSLDQDKMTSLFYTLVVPMLNPLIYSLRNKDVKEALKKLKNKIL 309
>Q6SPE9:SAMD1_RABIT Atherin - Oryctolagus cuniculus (Rabbit)| Length = 550 Score = 31.2 bits (69), Expect(2) = 2.8 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = -3 Query: 226 PPAVARP-GARRDPP---RLHPRQSASLLPPQPPAHAARNRSP 110 PPA A P G RR PP + R+S PPQPPA + + P Sbjct: 189 PPAAAPPAGPRRAPPPAAAVAARESPLPPPPQPPAPPQQQQQP 231 Score = 21.2 bits (43), Expect(2) = 2.8 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 Query: 371 PPAAVCCGSAPARS 330 PPA V +APAR+ Sbjct: 135 PPAPVAAAAAPARA 148
>P16753:VP40_HCMVA Capsid protein P40 [Contains: Assemblin - Human cytomegalovirus| (strain AD169) (HHV-5) (Human herpesvirus 5) Length = 708 Score = 33.1 bits (74), Expect = 4.1 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = -3 Query: 250 SGPLPRHHPPAVARPGARRDPPRLHPRQSASLLPPQPPAHAARNRSPLT 104 S P P PP+ +P A P + P +S L P PA AA PL+ Sbjct: 293 SSPSPPVEPPSPVQPPALPASPSVLPAESPPSLSPSEPAEAASMSHPLS 341
>Q15428:SF3A2_HUMAN Splicing factor 3A subunit 2 - Homo sapiens (Human)| Length = 464 Score = 33.1 bits (74), Expect = 4.1 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -3 Query: 244 PLPRHHPPAVARPGARRDPPRLHPRQSASLLPPQPPAHAA 125 P P HPPA PG P +HP SA + P P H A Sbjct: 346 PAPGVHPPA---PGVHPPAPGVHPPPSAGVHPQAPGVHPA 382
>Q9Z2I6:SV2C_RAT Synaptic vesicle glycoprotein 2C - Rattus norvegicus (Rat)| Length = 727 Score = 32.7 bits (73), Expect = 5.4 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -3 Query: 982 PMEEVVEEFQNCTILNRKNLQRNRAACSCINQKHYTRTDLYFLNILVTYGIQ*GVVFQVK 803 P + + EFQNC+ L+ N+ C Y+ +YF+N L T + G Sbjct: 549 PYKFIDSEFQNCSFLH------NKTGCQITFDDDYSAYWIYFVNFLGTLAVLPG------ 596 Query: 802 NLVSAVL 782 N+VSA+L Sbjct: 597 NIVSALL 603
>Q69ZS6:SV2C_MOUSE Synaptic vesicle glycoprotein 2C - Mus musculus (Mouse)| Length = 727 Score = 32.7 bits (73), Expect = 5.4 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -3 Query: 982 PMEEVVEEFQNCTILNRKNLQRNRAACSCINQKHYTRTDLYFLNILVTYGIQ*GVVFQVK 803 P + + EFQNC+ L+ N+ C Y+ +YF+N L T + G Sbjct: 549 PYKFIDSEFQNCSFLH------NKTGCQITFDDDYSAYWIYFVNFLGTLAVLPG------ 596 Query: 802 NLVSAVL 782 N+VSA+L Sbjct: 597 NIVSALL 603
>Q9QY00:OL154_MOUSE Olfactory receptor 154 - Mus musculus (Mouse)| Length = 318 Score = 32.7 bits (73), Expect = 5.4 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +2 Query: 830 YSICDKNVQEIKISPGIMLLIYTRTSSSIPL---KILSIEDGTVLKFFNHLLH--RNKKV 994 +S C ++ + I G + IY R SSS L K++S+ TV+ N ++ RNK+V Sbjct: 238 FSTCSSHLTAVSILYGTLFFIYVRPSSSFSLDINKVVSLFYTTVIPMLNPFIYSLRNKEV 297
>Q8U0I8:UPPS_PYRFU Undecaprenyl pyrophosphate synthetase - Pyrococcus furiosus| Length = 264 Score = 32.3 bits (72), Expect = 7.0 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 11/149 (7%) Frame = -3 Query: 1189 EIPNCYRPIPESQKQLEFIQKDEGRWSHEL----------STAHFSQVEVPYIKYLKIFS 1040 E P Y S+K E ++ W HEL ST +F + + + +K+F Sbjct: 53 EKPPWYGHFFGSKKLEEIVE-----WCHELGIRILTVYAFSTENFKRSKEEVDRLMKLF- 106 Query: 1039 ILLNQELFIKLFNEIHLLIPMEEVVEEFQNCTILNRKNLQRNRAACSCINQKHYTRT-DL 863 +E F +L + V E ++ RK L + + TR + Sbjct: 107 ----EEKFRELVTD-------RRVHEYGIRVNVMGRKELLPKNVREAAEEAERVTRKYNN 155 Query: 862 YFLNILVTYGIQ*GVVFQVKNLVSAVLSG 776 YFLNI + YG + +V +K++V+ VL G Sbjct: 156 YFLNIALAYGGRSEIVDAIKDIVNDVLEG 184
>Q86UQ4:ABCAD_HUMAN ATP-binding cassette sub-family A member 13 - Homo sapiens (Human)| Length = 5058 Score = 32.3 bits (72), Expect = 7.0 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +2 Query: 992 VDFIEQFNE---KLLVKQDGENLQILDVRNFHLTEVSSTEFMTPSAFIFLYELQLFLT 1156 VDF EQF + L +K+D EN L ++ FH ++ F+ + + +L FLT Sbjct: 2261 VDFTEQFLKTFFSLFLKEDSENKISLLLKYFHKDVIAEMSFVPKDKILEILKLDQFLT 2318
>Q62203:SF3A2_MOUSE Splicing factor 3A subunit 2 - Mus musculus (Mouse)| Length = 475 Score = 32.0 bits (71), Expect = 9.2 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 Query: 244 PLPRHHPPAVARPGARRDPPRLHPRQSASLLPPQPPAH 131 P P HPPA PG P +HP SA + P P H Sbjct: 357 PAPGVHPPA---PGVHPPAPGVHPPPSAGVHPQAPGVH 391
>Q99583:MNT_HUMAN Max-binding protein MNT - Homo sapiens (Human)| Length = 582 Score = 32.0 bits (71), Expect = 9.2 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -3 Query: 244 PLPRH---HPPAVARPGARRDPPRLHPRQSASL-LPPQPPAHAARNRSP 110 PLP H HP +VA P A + P+Q L PP PPA A+ P Sbjct: 377 PLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAPAQTLVP 425
>Q9H9A6:LRC40_HUMAN Leucine-rich repeat-containing protein 40 - Homo sapiens (Human)| Length = 602 Score = 32.0 bits (71), Expect = 9.2 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 13/150 (8%) Frame = +2 Query: 689 AGFPLFETESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLLYSICDKNVQEIKI 868 +G L E W V+ + + L++ A + ++ DL + + ++++ Sbjct: 44 SGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRL 103 Query: 869 SPGIMLL-IYTRTSSSIPLKILSIEDGTVLKFFNHLLH---------RNKKVDFIEQFNE 1018 P + +L I+ +S+P I +E+ L ++ L RN K ++ Q NE Sbjct: 104 LPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYL-QHNE 162 Query: 1019 KLLVKQDGE---NLQILDVRNFHLTEVSST 1099 + + E NL+ LD+ N HLT V ++ Sbjct: 163 LTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192
>Q3JCM5:ANMK_NITOC Anhydro-N-acetylmuramic acid kinase - Nitrosococcus oceani (strain| ATCC 19707 / NCIMB 11848) Length = 376 Score = 32.0 bits (71), Expect = 9.2 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Frame = +3 Query: 1467 LCTMT----KCAMRSTPATAMALFMCGRTESRDNRFQGTNKVLFICRRTNLTT---KPQV 1625 LC +T K A++S+ L +CG + + +G K L CR T T PQ Sbjct: 270 LCALTIASVKLAIQSSSPHTEELLICGGGANNETLMEGLRKQLAFCRVTTTTAYGIPPQW 329 Query: 1626 VLAAKRSWVSSR 1661 V A +W++ + Sbjct: 330 VEACTFAWLAKQ 341 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 301,993,060 Number of extensions: 6401359 Number of successful extensions: 19203 Number of sequences better than 10.0: 14 Number of HSP's gapped: 19094 Number of HSP's successfully gapped: 15 Length of query: 627 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 508 Effective length of database: 68,045,334 Effective search space: 34567029672 Effective search space used: 34567029672 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)