ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf107n02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073846:Os01g0962600 | 117 | 1e-42 | 2 | AK102190:Os04g0430100 | 111 | 2e-40 | 3 | AK066564:Os02g0549600 | 111 | 2e-40 | 4 | AB054123: | 107 | 3e-39 | 5 | AK108150: | 66 | 4e-16 | 6 | AK120679:Os03g0101400 | 29 | 4.1 | 7 | AK069542:Os02g0175700 | 29 | 5.3 | 8 | Os01g0556600:Os01g0556600 | 28 | 9.0 | 9 | AK120161:Os03g0330300 | 28 | 9.0 | 10 | AK102964:Os01g0196300 | 28 | 9.0 | 11 | AK101994:Os11g0598800 | 28 | 9.0 | 12 | AK099333:Os04g0648900 | 28 | 9.0 | 13 | AK061095:Os04g0648900 | 28 | 9.0 | 14 | AK060756:Os03g0330300 | 28 | 9.0 |
|---|
>AK073846:Os01g0962600 | Length = 179 Score = 117 bits (293), Expect(2) = 1e-42 Identities = 61/112 (54%), Positives = 66/112 (58%) Frame = +2 Query: 203 VIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXXX 382 VIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIE LR++LNLPSE+VPNTLKKSAK Sbjct: 42 VIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRP 101 Query: 383 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPA++Q Sbjct: 102 FGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153 Score = 74.3 bits (181), Expect(2) = 1e-42 Identities = 34/36 (94%), Positives = 35/36 (97%) Frame = +3 Query: 81 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVD 188 MIISKKNRREICKYLF EGVLYAKKDYNLAKHP+VD Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD 36
>AK102190:Os04g0430100 | Length = 183 Score = 111 bits (277), Expect(2) = 2e-40 Identities = 59/113 (52%), Positives = 65/113 (57%) Frame = +2 Query: 200 RVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXX 379 +VIKLMQSFKSKEYVRETFSWQ+YYWYLTNDGIE LR +LNLPSEIVP TLKKSA+ Sbjct: 41 QVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGR 100 Query: 380 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPA++Q Sbjct: 101 PFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153 Score = 73.6 bits (179), Expect(2) = 2e-40 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = +3 Query: 81 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVD 188 MII KKNR EICKYLFQEGVLYAKKDYNLAKHPQ+D Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID 36
>AK066564:Os02g0549600 | Length = 183 Score = 111 bits (277), Expect(2) = 2e-40 Identities = 59/113 (52%), Positives = 65/113 (57%) Frame = +2 Query: 200 RVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXX 379 +VIKLMQSFKSKEYVRETFSWQ+YYWYLTNDGIE LR +LNLPSEIVP TLKKSA+ Sbjct: 41 QVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGR 100 Query: 380 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPA++Q Sbjct: 101 PFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153 Score = 73.6 bits (179), Expect(2) = 2e-40 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = +3 Query: 81 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVD 188 MII KKNR EICKYLFQEGVLYAKKDYNLAKHPQ+D Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID 36
>AB054123: | Length = 183 Score = 107 bits (266), Expect(2) = 3e-39 Identities = 57/113 (50%), Positives = 63/113 (55%) Frame = +2 Query: 200 RVIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAKXXXX 379 +VIK MQSFKSKEYVRETFSWQ+YYWYLTNDGIE L +LNLPSEIVP TLKKSA+ Sbjct: 41 QVIKFMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLLNYLNLPSEIVPATLKKSARPPGR 100 Query: 380 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGEKGGAPADYQ 538 F GEKGGAPA++Q Sbjct: 101 PFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQ 153 Score = 73.6 bits (179), Expect(2) = 3e-39 Identities = 33/36 (91%), Positives = 34/36 (94%) Frame = +3 Query: 81 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVD 188 MII KKNR EICKYLFQEGVLYAKKDYNLAKHPQ+D Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID 36
>AK108150: | Length = 156 Score = 66.2 bits (160), Expect(2) = 4e-16 Identities = 29/55 (52%), Positives = 42/55 (76%) Frame = +2 Query: 203 VIKLMQSFKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVPNTLKKSAK 367 V+K +QS S+ YV FSWQ Y++ LT++G+E+LR FL+LP+EIVP T K+ A+ Sbjct: 41 VVKALQSLTSRGYVHTQFSWQWYFYTLTDEGVEYLREFLHLPAEIVPATHKRPAR 95 Score = 36.6 bits (83), Expect(2) = 4e-16 Identities = 17/36 (47%), Positives = 28/36 (77%) Frame = +3 Query: 81 MIISKKNRREICKYLFQEGVLYAKKDYNLAKHPQVD 188 MIISK+NR+ I LF+EGV+ A K++ + +HP+++ Sbjct: 1 MIISKENRKTIYASLFKEGVMVAPKNFTV-QHPELE 35
>AK120679:Os03g0101400 | Length = 361 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 9/35 (25%) Frame = -2 Query: 527 QELHPSHQQ---------NHQEHHVGLLCNHPCHH 450 Q LHPSHQQ + HHV HP HH Sbjct: 132 QHLHPSHQQQPPPPQPVHHRHRHHVRRRRAHPRHH 166
>AK069542:Os02g0175700 | Length = 583 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -2 Query: 632 SFFTPWKVQNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHH 483 SF P VQ +++ H HQ QQ P H Q+HQ HH Sbjct: 483 SFLPPSNVQFAMLNQQQHQYYQSQHQ--------QQYYQPHHFQDHQHHH 524
>Os01g0556600:Os01g0556600 | Length = 1932 Score = 28.1 bits (61), Expect = 9.0 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 224 FKSKEYVRETFSWQHYYWYLTNDGIEFLRTFLNLPSEIVP 343 F S YVR F + Y+ Y T+D +RT L+ PS ++P Sbjct: 829 FCSVGYVRSLF--EKYWTYFTDDIQRRVRTALSNPSYVIP 866
>AK120161:Os03g0330300 | Length = 567 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/56 (26%), Positives = 23/56 (41%) Frame = -3 Query: 574 KGPGTTSTPEXXXXXXXXXXXXXSKITRSTTWASSVTIPVTIPRPVTLKTRRTPGA 407 K P S+P+ +T++TT + + P T+ P RRTP A Sbjct: 125 KAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAPTATSRRRTPVA 180
>AK102964:Os01g0196300 | Length = 439 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = +2 Query: 122 PLPGGSLVRQ-EGLQPGQAP-PGRCLEPRVIKLMQSFKSKEYVRETFSWQHYY 274 P GG+ R L+P + P PG C + R+ K S +K +V T++ Q+YY Sbjct: 180 PATGGAFRRYARHLRPRRLPKPGGCGQ-RMFKTAMSVLTKMHVAATYNRQYYY 231
>AK101994:Os11g0598800 | Length = 952 Score = 28.1 bits (61), Expect = 9.0 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 93 KKNRREICKYLFQEGVLYAKKDYNLAK 173 KKN E+C Y ++E +L A KD+ AK Sbjct: 477 KKNLLEVCTYDYREIILPAMKDFLWAK 503
>AK099333:Os04g0648900 | Length = 233 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/44 (34%), Positives = 17/44 (38%) Frame = -2 Query: 623 TPWKVQNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ 492 T V T HR HH H L +E H H+Q HQ Sbjct: 165 TGMMVAPTTHHRERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQ 208
>AK061095:Os04g0648900 | Length = 233 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/44 (34%), Positives = 17/44 (38%) Frame = -2 Query: 623 TPWKVQNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ 492 T V T HR HH H L +E H H+Q HQ Sbjct: 165 TGMMVAPTTHHRERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQ 208
>AK060756:Os03g0330300 | Length = 1073 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/56 (26%), Positives = 23/56 (41%) Frame = -3 Query: 574 KGPGTTSTPEXXXXXXXXXXXXXSKITRSTTWASSVTIPVTIPRPVTLKTRRTPGA 407 K P S+P+ +T++TT + + P T+ P RRTP A Sbjct: 631 KAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAPTATSRRRTPVA 686 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,982,483 Number of extensions: 394807 Number of successful extensions: 1432 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1419 Number of HSP's successfully gapped: 19 Length of query: 307 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 207 Effective length of database: 11,395,755 Effective search space: 2358921285 Effective search space used: 2358921285 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
