ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf107n02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831917.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA214H05, full insert sequence Length = 901 Score = 547 bits (276), Expect = e-152 Identities = 427/476 (89%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagggag 147 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 ||||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| Sbjct: 148 tcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaact 207 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||| | || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 208 tggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttct 267 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 ||||||||||||||||||||||||||||||| || ||||||||| |||||||| || || Sbjct: 268 cgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacc 327 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 |||||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||| | Sbjct: 328 tcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctc 387 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| |||||||||||||| || |||||||||||||| || || ||||| |||||||||| Sbjct: 388 gcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtg 447 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 ||||||| |||| ||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 448 acaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccaggtg 507 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggt 553 |||||| ||| ||||||||||| ||||| ||||| | ||||||| |||| |||||| Sbjct: 508 attttggtggcgagaagggtggtgctccagctgagttccagccatcttttaggggt 563
>ref|NM_001052015.1| Oryza sativa (japonica cultivar-group) Os01g0962600 (Os01g0962600) mRNA, complete cds Length = 899 Score = 547 bits (276), Expect = e-152 Identities = 427/476 (89%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagggag 145 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 ||||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| Sbjct: 146 tcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaact 205 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||| | || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 206 tggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttct 265 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 ||||||||||||||||||||||||||||||| || ||||||||| |||||||| || || Sbjct: 266 cgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacc 325 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 |||||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||| | Sbjct: 326 tcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctc 385 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| |||||||||||||| || |||||||||||||| || || ||||| |||||||||| Sbjct: 386 gcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtg 445 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 ||||||| |||| ||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 446 acaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccaggtg 505 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggt 553 |||||| ||| ||||||||||| ||||| ||||| | ||||||| |||| |||||| Sbjct: 506 attttggtggcgagaagggtggtgctccagctgagttccagccatcttttaggggt 561
>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full insert sequence Length = 900 Score = 539 bits (272), Expect = e-150 Identities = 426/476 (89%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 87 ccatgatcatctgcaagaagaaccgccgcgagatctgcaagtacctcttccatgagggag 146 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 ||||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| Sbjct: 147 tcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaact 206 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||| | || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 207 tggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttct 266 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 ||||||||||||||||||||||||||||||| || ||||||||| |||||||| || || Sbjct: 267 cgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacc 326 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 |||||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||| | Sbjct: 327 tcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctc 386 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| |||||||||||||| || |||||||||||||| || || ||||| |||||||||| Sbjct: 387 gcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtg 446 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 ||||||| |||| ||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 447 acaggcccaggtttggtgacagggatggttacaggggtggcccacgtggtgctccaggtg 506 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggt 553 |||||| ||| ||||||||||| ||||| ||||| | ||||||| |||| |||||| Sbjct: 507 attttggtggcgagaagggtggtgctccagctgagttccagccatcttttaggggt 562
>gb|DQ244752.1| Zea mays clone 10501 mRNA sequence Length = 808 Score = 507 bits (256), Expect = e-140 Identities = 422/476 (88%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | Sbjct: 95 ccatgatcatctccaagaagaaccgccgcgagatctgcaaatacctcttccatgaggggg 154 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 ||||||||||||||||||||||||||||||||||||||||| || | |||| | ||| Sbjct: 155 tcttgtacgccaagaaggactacaacctggccaagcaccccaagcttgatgtgcccaact 214 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||| | || ||||||||||||||||||||||| |||||||| || ||||| ||||||| Sbjct: 215 tggaggtgattaagctcatgcagagcttcaagtcgaaggagtatgtgagggaaaccttct 274 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| |||||||||||||||| |||||||| ||||||||| |||||||| ||||| Sbjct: 275 catggcagtactactactggtacctcaccaacgatggcattgagcacctccgcagcttcc 334 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 |||||||||| || ||| | ||||| || |||||||||||||| ||||||||||||| | Sbjct: 335 tcaacctgccatcagaggttgtgcctaataccctcaagaagtcttccaagcccccgtctc 394 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||| Sbjct: 395 gccccttcggctctggcccacctggtgaccgccccaggggccctcctcgttatgaaggtg 454 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 |||||||||||| |||||| |||||||||||||||||||| |||||||| ||||| |||| Sbjct: 455 acaggcctaggtttggtgatagggatggttacagaggaggtccacgtggcgctccaggtg 514 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggt 553 | |||| |||||| |||||||| |||||||| || | ||| ||| |||| |||||| Sbjct: 515 actttggtggtgataagggtggtgctcctgcagatttccaaccatcttttaggggt 570
>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence Length = 841 Score = 484 bits (244), Expect = e-133 Identities = 419/476 (88%), Gaps = 1/476 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 62 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacatcttccatgaggggg 121 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 | | || ||||||||||||||||||||||||||||||||| || | || | | |||| Sbjct: 122 ttctatatgccaagaaggactacaacctggccaagcaccccaagcttgacgtgcccaacc 181 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||| | || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 182 tggaggtgattaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttct 241 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| |||||||||||||||| |||||||| ||||||||| |||||||| ||||| Sbjct: 242 cctggcagtactactactggtacctcaccaacgatggcattgagcacctccgcagcttcc 301 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 ||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||| Sbjct: 302 tcaacctgccgtcagaggttgtgcccaacaccctcaagaagtcctccaagcccccgtccc 361 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 | ||||| |||||||||||||| |||||||||||||||||||| ||||| |||| || | Sbjct: 362 gtccctttggctctggcccaccgggtgaccgccccaggggtccccctcgctttggggaag 421 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 |||| ||||||| ||| || |||||||||||||||||||| ||||| ||||| |||| Sbjct: 422 acagacctaggtttggggatagggatggttacagaggaggtccacgaggtgcaatgggtg 481 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggt 553 |||||| ||||||||||||| | |||||||| || | ||||||| |||| |||||| Sbjct: 482 attttggtggtgagaagggtagtgctcctgcggatttccagccatcttttaggggt 537
>ref|NM_001059351.1| Oryza sativa (japonica cultivar-group) Os04g0430100 (Os04g0430100) mRNA, complete cds Length = 899 Score = 400 bits (202), Expect = e-108 Identities = 401/466 (86%), Gaps = 1/466 (0%) Strand = Plus / Plus Query: 77 cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 136 ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 89 cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 148 Query: 137 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 196 ||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| Sbjct: 149 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 208 Query: 197 cctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 255 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 268 Query: 256 ctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacctt 315 ||| |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || Sbjct: 269 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaacta 328 Query: 316 cctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtc 375 ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| || Sbjct: 329 ccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctgg 388 Query: 376 ccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgaggg 435 |||||| || || ||||||||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 389 ccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttgaagg 448 Query: 436 tgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctgg 495 |||||||| |||| ||||||||| ||||| ||| | || || || |||||||||||||| Sbjct: 449 ggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctcctgg 508 Query: 496 tgattttgctggtgagaagggtggagctcctgctgactaccagcca 541 ||| |||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 509 tgactttggtggtgagaagggtggagctcctgctgagttccagcca 554
>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 392 bits (198), Expect = e-106 Identities = 400/466 (85%), Gaps = 1/466 (0%) Strand = Plus / Plus Query: 77 cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 136 ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 90 cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 149 Query: 137 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 196 ||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| Sbjct: 150 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 209 Query: 197 cctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 255 ||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 cctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 269 Query: 256 ctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacctt 315 ||| |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || Sbjct: 270 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaacta 329 Query: 316 cctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtc 375 ||| |||||||| |||||||| ||||| ||| ||| ||||||| |||| ||| || Sbjct: 330 ccttaacctgccatctgagattgtgcctgccacactcgagaagtctgccaggccacctgg 389 Query: 376 ccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgaggg 435 |||||| || || ||||||||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 390 ccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttgaagg 449 Query: 436 tgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctgg 495 |||||||| |||| ||||||||| ||||| ||| | || || || |||||||||||||| Sbjct: 450 ggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctcctgg 509 Query: 496 tgattttgctggtgagaagggtggagctcctgctgactaccagcca 541 ||| |||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 510 tgactttggtggtgagaagggtggagctcctgctgagttccagcca 555
>gb|DQ245522.1| Zea mays clone 16675 mRNA sequence Length = 765 Score = 367 bits (185), Expect = 5e-98 Identities = 402/473 (84%), Gaps = 1/473 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 76 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 135 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 | |||| ||||||||||||||||||||||| |||||||| ||| |||||| | |||| Sbjct: 136 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcccaacc 195 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 || || | |||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 196 tccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttagggagaccttct 255 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| ||||||||||||| || |||||||| ||||||||| ||| |||| || || Sbjct: 256 cctggcagtactactactggtatctcaccaacgatggcattgagcacctacgcaactacc 315 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 | ||||| ||||||||||||||||| ||| ||||||||||| |||||||| || || Sbjct: 316 tgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctggcc 375 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| || ||||||||||| || ||||||||||| ||||| || ||||||||| || | Sbjct: 376 gcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgttttgacggcg 435 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 ||||||| |||| ||||||||||||||| ||| | || || || |||||||||||||||| Sbjct: 436 acaggccaaggtttggtgacagggatgggtaccgtggtggtcctcgtggtgctcctggtg 495 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 | |||| ||| || ||| |||||||||||||||| | ||||||| | |||||| Sbjct: 496 actttggtggcgataagagtggagctcctgctgagttccagccatcattcagg 548
>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 365 bits (184), Expect = 2e-97 Identities = 389/456 (85%), Gaps = 1/456 (0%) Strand = Plus / Plus Query: 77 cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 136 ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 88 cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 147 Query: 137 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 196 ||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| Sbjct: 148 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 207 Query: 197 cctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 255 ||| || | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cctgcaggtgatcaagttcatgcagagcttcaagtccaaggagtacgtcagggagacctt 267 Query: 256 ctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacctt 315 ||| |||||| |||||||||||||||| |||||||| ||||||||| ||| | || || Sbjct: 268 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgctcaacta 327 Query: 316 cctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtc 375 ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| || Sbjct: 328 ccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctgg 387 Query: 376 ccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgaggg 435 ||||| || || ||||||||||| || ||||| || ||||| || ||||| ||||| || Sbjct: 388 tcgcccatttggttctggcccacctggcgaccgtccaaggggcccgcctcgctttgaagg 447 Query: 436 tgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctgg 495 |||||||| |||| ||||||||| ||||| ||| | || || || |||||||||||||| Sbjct: 448 ggacaggccaaggtttggtgacagagatgggtaccgtggtggtcctcgtggtgctcctgg 507 Query: 496 tgattttgctggtgagaagggtggagctcctgctga 531 ||| |||| ||||||||||||||||||||||||||| Sbjct: 508 tgactttggtggtgagaagggtggagctcctgctga 543
>gb|AY103548.1| Zea mays PCO091529 mRNA sequence Length = 1541 Score = 359 bits (181), Expect = 1e-95 Identities = 401/473 (84%), Gaps = 1/473 (0%) Strand = Plus / Plus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 245 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 304 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 | |||| ||||||||||||||||||||||| |||||||| ||| |||||| | |||| Sbjct: 305 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcccaacc 364 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 || || | |||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 365 tccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttagggagaccttct 424 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| ||||||||||||| || |||||||| ||||||||| ||| |||| || || Sbjct: 425 cctggcagtactactactggtatctcaccaacgatggcattgagcacctacgcaactacc 484 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 | ||||| ||||||||||||||||| ||| ||||||||||| |||||||| || || Sbjct: 485 tgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctggcc 544 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| || ||||||||||| || ||||||||||| ||||| || ||||||||| || | Sbjct: 545 gcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgttttgacggcg 604 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 ||||||| |||| |||||||||||||| ||| | || || || |||||||||||||||| Sbjct: 605 acaggccaaggtttggtgacagggatgagtaccgtggtggtcctcgtggtgctcctggtg 664 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 | |||| ||| || ||| |||||||||||||||| | ||||||| | |||||| Sbjct: 665 actttggtggcgataagagtggagctcctgctgagttccagccatcattcagg 717 Score = 168 bits (85), Expect = 2e-38 Identities = 143/161 (88%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 142 tgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctcg 201 |||| ||||||||||||||||||||||| |||||||| ||| | |||| | |||||| Sbjct: 21 tgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacctcc 80 Query: 202 ag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcgt 260 || | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 81 aggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagaccttctcct 140 Query: 261 ggcagcactactactggtacctgaccaacgacggcattgag 301 ||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 141 ggcagtactactactggtacctcaccaacgatggcattgag 181
>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 323 bits (163), Expect = 6e-85 Identities = 397/473 (83%), Gaps = 4/473 (0%) Strand = Plus / Minus Query: 79 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 138 ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 794 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 735 Query: 139 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 198 | |||| ||||||||||||||||||||||| |||||||| ||| | |||| | |||| Sbjct: 734 tgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacc 675 Query: 199 tcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 || || | ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 674 tccaggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagaccttct 615 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || || Sbjct: 614 cctggcagtactactactggtacctcaccaacgatggcattgagcacctacgcaactacc 555 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 | ||||| ||||||||||||||||| ||| ||||||||||| |||| ||| | | || Sbjct: 554 tgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaggccactgggcc 495 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 | || || ||||||||||| || ||||||||||| ||||| ||| ||||||||| | Sbjct: 494 gtccatttggctctggccctcctggtgaccgcccaaggggccctggtcgttttga---ag 438 Query: 438 acaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtg 497 |||| || |||| ||| |||||||||| ||| | || || || |||||||||||||||| Sbjct: 437 acagaccaaggtttggagacagggatgagtaccgtggtggtcctcgtggtgctcctggtg 378 Query: 498 attttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 | || | ||| || ||| |||||||||||||||| | ||||||| |||||||| Sbjct: 377 acttcggtggcgataagagtggagctcctgctgagttccagccatctttcagg 325
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 311 bits (157), Expect = 2e-81 Identities = 254/285 (89%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct: 42419109 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 42419050 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||| | ||| | || ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 42419049 cccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggag 42418990 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 42418989 accttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgc 42418930 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || |||||||||||| |||||| | ||||| ||||||||||||||||| ||||||||| Sbjct: 42418929 agctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagccc 42418870 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccccagg 415 ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 42418869 ccgtctcgcccattcggctctggccctcctggtgaccgccccagg 42418825 Score = 147 bits (74), Expect = 8e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 422 cctcgttttgagggtgacaggcctaggtatggtgacagggatggttacagaggaggccca 481 ||||| ||||||||||||||||| |||| ||||||||||||||||||||| || |||||| Sbjct: 42418335 cctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggccca 42418276 Query: 482 cgtggtgctcctggtgattttgctggtgagaagggtggagctcctgctgactaccagcca 541 ||||||||||| |||||||||| ||| ||||||||||| ||||| ||||| | ||||||| Sbjct: 42418275 cgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagcca 42418216 Query: 542 gctttcaggg 551 |||| |||| Sbjct: 42418215 tcttttaggg 42418206 Score = 95.6 bits (48), Expect = 3e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42419508 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 42419461
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 311 bits (157), Expect = 2e-81 Identities = 254/285 (89%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct: 78447 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 78388 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||| | ||| | || ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 78387 cccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggag 78328 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 78327 accttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgc 78268 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || |||||||||||| |||||| | ||||| ||||||||||||||||| ||||||||| Sbjct: 78267 agctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagccc 78208 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccccagg 415 ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 78207 ccgtctcgcccattcggctctggccctcctggtgaccgccccagg 78163 Score = 147 bits (74), Expect = 8e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 422 cctcgttttgagggtgacaggcctaggtatggtgacagggatggttacagaggaggccca 481 ||||| ||||||||||||||||| |||| ||||||||||||||||||||| || |||||| Sbjct: 77673 cctcgctttgagggtgacaggcccaggtttggtgacagggatggttacaggggtggccca 77614 Query: 482 cgtggtgctcctggtgattttgctggtgagaagggtggagctcctgctgactaccagcca 541 ||||||||||| |||||||||| ||| ||||||||||| ||||| ||||| | ||||||| Sbjct: 77613 cgtggtgctccaggtgattttggtggcgagaagggtggtgctccagctgagttccagcca 77554 Query: 542 gctttcaggg 551 |||| |||| Sbjct: 77553 tcttttaggg 77544 Score = 95.6 bits (48), Expect = 3e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78846 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 78799
>ref|NM_001053623.1| Oryza sativa (japonica cultivar-group) Os02g0549600 (Os02g0549600) mRNA, complete cds Length = 852 Score = 278 bits (140), Expect = 3e-71 Identities = 402/488 (82%), Gaps = 1/488 (0%) Strand = Plus / Plus Query: 76 tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 135 |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 75 tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 134 Query: 136 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 195 | || ||||||||||||||||||||||| |||| || ||||| ||| | |||| | | Sbjct: 135 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 194 Query: 196 acctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacct 254 |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 195 accttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagacct 254 Query: 255 tctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacct 314 |||| |||||| |||||||||||||||| || || || ||||||||| ||| | | | Sbjct: 255 tctcctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaatt 314 Query: 315 tcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgt 374 ||| ||| ||||||||||||| || || || ||||||||||| || | ||| || Sbjct: 315 accttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccag 374 Query: 375 cccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagg 434 |||||| || ||||||||||| || ||||| ||||| ||||| || ||||| || || | Sbjct: 375 gccgcccatttggctctggcccccctggtgatcgcccaaggggcccacctcggttcgaag 434 Query: 435 gtgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctg 494 | ||||| || |||| ||| ||| ||||||| ||| | || || || |||||||| |||| Sbjct: 435 gggacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctg 494 Query: 495 gtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggtg 554 ||||||||| ||||||||||||||| |||||||| || | ||||||| | |||||| || Sbjct: 495 gtgattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggagtt 554 Query: 555 ctggtggt 562 |||||||| Sbjct: 555 ctggtggt 562
>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full insert sequence Length = 853 Score = 278 bits (140), Expect = 3e-71 Identities = 402/488 (82%), Gaps = 1/488 (0%) Strand = Plus / Plus Query: 76 tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 135 |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 76 tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 135 Query: 136 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 195 | || ||||||||||||||||||||||| |||| || ||||| ||| | |||| | | Sbjct: 136 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 195 Query: 196 acctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacct 254 |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 196 accttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagacct 255 Query: 255 tctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacct 314 |||| |||||| |||||||||||||||| || || || ||||||||| ||| | | | Sbjct: 256 tctcctggcagtactactactggtacctcactaatgatggcattgagcacctgaggaatt 315 Query: 315 tcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgt 374 ||| ||| ||||||||||||| || || || ||||||||||| || | ||| || Sbjct: 316 accttaacttgccgtctgagattgtacctgctacactcaagaagtctgcaaggccaccag 375 Query: 375 cccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagg 434 |||||| || ||||||||||| || ||||| ||||| ||||| || ||||| || || | Sbjct: 376 gccgcccatttggctctggcccccctggtgatcgcccaaggggcccacctcggttcgaag 435 Query: 435 gtgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctg 494 | ||||| || |||| ||| ||| ||||||| ||| | || || || |||||||| |||| Sbjct: 436 gggacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctg 495 Query: 495 gtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggggtg 554 ||||||||| ||||||||||||||| |||||||| || | ||||||| | |||||| || Sbjct: 496 gtgattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggagtt 555 Query: 555 ctggtggt 562 |||||||| Sbjct: 556 ctggtggt 563
>emb|CR855094.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0222C05, complete sequence Length = 37743 Score = 232 bits (117), Expect = 2e-57 Identities = 241/281 (85%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 |||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 23446 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 23505 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23506 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 23565 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| ||| Sbjct: 23566 accttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgc 23625 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| Sbjct: 23626 aactacctaaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcca 23685 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccc 411 || |||||| || || ||||||||||| || |||||||| Sbjct: 23686 cctggccgcccatttggttctggcccacctggcgaccgccc 23726 Score = 113 bits (57), Expect = 1e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 413 aggggtcctcctcgttttgagggtgacaggcctaggtatggtgacagggatggttacaga 472 ||||| || ||||| ||||| || |||||||| |||| ||||||||| ||||| ||| | Sbjct: 24309 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 24368 Query: 473 ggaggcccacgtggtgctcctggtgattttgctggtgagaagggtggagctcctgctgac 532 || || || ||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 24369 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 24428 Query: 533 taccagcca 541 | ||||||| Sbjct: 24429 ttccagcca 24437 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 22952 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 22999
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 232 bits (117), Expect = 2e-57 Identities = 241/281 (85%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 |||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 152161 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 152220 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152221 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 152280 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| ||| Sbjct: 152281 accttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgc 152340 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| Sbjct: 152341 aactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcca 152400 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccc 411 || |||||| || || ||||||||||| || |||||||| Sbjct: 152401 cctggccgcccatttggttctggcccacctggcgaccgccc 152441 Score = 113 bits (57), Expect = 1e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 413 aggggtcctcctcgttttgagggtgacaggcctaggtatggtgacagggatggttacaga 472 ||||| || ||||| ||||| || |||||||| |||| ||||||||| ||||| ||| | Sbjct: 153042 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 153101 Query: 473 ggaggcccacgtggtgctcctggtgattttgctggtgagaagggtggagctcctgctgac 532 || || || ||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 153102 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 153161 Query: 533 taccagcca 541 | ||||||| Sbjct: 153162 ttccagcca 153170 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 151665 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 151712
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 232 bits (117), Expect = 2e-57 Identities = 241/281 (85%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 |||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 21338687 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 21338746 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21338747 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 21338806 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| ||| Sbjct: 21338807 accttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgc 21338866 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| Sbjct: 21338867 aactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcca 21338926 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccc 411 || |||||| || || ||||||||||| || |||||||| Sbjct: 21338927 cctggccgcccatttggttctggcccacctggcgaccgccc 21338967 Score = 113 bits (57), Expect = 1e-21 Identities = 111/129 (86%) Strand = Plus / Plus Query: 413 aggggtcctcctcgttttgagggtgacaggcctaggtatggtgacagggatggttacaga 472 ||||| || ||||| ||||| || |||||||| |||| ||||||||| ||||| ||| | Sbjct: 21339568 aggggcccgcctcgctttgaaggggacaggccaaggtttggtgacagagatgggtaccgt 21339627 Query: 473 ggaggcccacgtggtgctcctggtgattttgctggtgagaagggtggagctcctgctgac 532 || || || ||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 21339628 ggtggtcctcgtggtgctcctggtgactttggtggtgagaagggtggagctcctgctgag 21339687 Query: 533 taccagcca 541 | ||||||| Sbjct: 21339688 ttccagcca 21339696 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 21338191 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 21338238
>gb|BT017535.1| Zea mays clone EL01N0422A10.c mRNA sequence Length = 568 Score = 149 bits (75), Expect = 2e-32 Identities = 192/231 (83%) Strand = Plus / Plus Query: 320 aacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtcccgc 379 ||||| ||||||||||||||||| ||| ||||||||||| |||||||| || |||| Sbjct: 29 aacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctggccgc 88 Query: 380 cccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtgac 439 || || ||||||||||| || ||||||||||| ||||| || |||||||| || ||| Sbjct: 89 ccatttggctctggccctcctggtgaccgcccaaggggcccaggccgttttgacggcgac 148 Query: 440 aggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggtgat 499 ||||| |||| ||||||||||||||| ||| | || || || ||||||||||||||||| Sbjct: 149 aggccaaggtttggtgacagggatgggtaccgtggtggtcctcgtggtgctcctggtgac 208 Query: 500 tttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 |||| ||| || ||| |||||||||||||||| | ||||||| | |||||| Sbjct: 209 tttggtggcgataagagtggagctcctgctgagttccagccatcattcagg 259
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 149 bits (75), Expect = 2e-32 Identities = 148/171 (86%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 20669679 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20669738 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20669739 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 20669798 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 20669799 accttctcctggcagtactactactggtacctcactaatgatggcattgag 20669849 Score = 77.8 bits (39), Expect = 6e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 437 gacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggt 496 ||||| || |||| ||| ||| ||||||| ||| | || || || |||||||| |||||| Sbjct: 20670548 gacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggt 20670607 Query: 497 gattttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggg 551 ||||||| ||||||||||||||| |||||||| || | ||||||| | ||||||| Sbjct: 20670608 gattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggg 20670662 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 20669149 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20669196
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 149 bits (75), Expect = 2e-32 Identities = 148/171 (86%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 20785 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20844 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20845 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 20904 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 20905 accttctcctggcagtactactactggtacctcactaatgatggcattgag 20955 Score = 77.8 bits (39), Expect = 6e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 437 gacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggt 496 ||||| || |||| ||| ||| ||||||| ||| | || || || |||||||| |||||| Sbjct: 21654 gacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggt 21713 Query: 497 gattttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggg 551 ||||||| ||||||||||||||| |||||||| || | ||||||| | ||||||| Sbjct: 21714 gattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggg 21768 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 20255 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20302
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 149 bits (75), Expect = 2e-32 Identities = 148/171 (86%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 132 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 191 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 66534 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 66593 Query: 192 tcgaacctcgag-tcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 66594 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 66653 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 66654 accttctcctggcagtactactactggtacctcactaatgatggcattgag 66704 Score = 77.8 bits (39), Expect = 6e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 437 gacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgctcctggt 496 ||||| || |||| ||| ||| ||||||| ||| | || || || |||||||| |||||| Sbjct: 67403 gacagaccaaggtttggagaccgggatggctaccgtggtggacctcgtggtgcgcctggt 67462 Query: 497 gattttgctggtgagaagggtggagctcctgctgactaccagccagctttcaggg 551 ||||||| ||||||||||||||| |||||||| || | ||||||| | ||||||| Sbjct: 67463 gattttggtggtgagaagggtggtgctcctgcagaattccagccatcattcaggg 67517 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 83 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 130 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 66004 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 66051
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA, complete cds Length = 859 Score = 107 bits (54), Expect = 7e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 428 tttgagggtgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggt 487 ||||||||||| ||||| |||||||| ||||| ||||||||| | | || || | ||| Sbjct: 394 tttgagggtgataggccaaggtatggcgacagagatggttaccgtgctggacctagaggt 453 Query: 488 gctcctggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 | |||||||| |||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 454 ccacctggtgagtttggaggtgagaagggtggagctccagctgactaccagcctgctttc 513 Query: 548 aggggtgctggtgg 561 |||||| ||||||| Sbjct: 514 aggggttctggtgg 527 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 78 gccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggga 137 |||||||| ||||| |||||||||| | ||||||| ||| ||||||||||| |||||| Sbjct: 46 gccatgattatctcagagaagaaccgtagagagatctccaaatacctcttccaagaggga 105 Query: 138 gtcttgtacgccaagaaggactacaacctggccaagca 175 || | ||||| |||||||| |||||| |||||||||| Sbjct: 106 gtgtgctacgcgaagaaggattacaacttggccaagca 143 Score = 67.9 bits (34), Expect = 6e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 206 atcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcgtggcag 265 ||||| || |||||||||||||| || |||||||| || | ||||| ||| | ||| | Sbjct: 175 atcaaactgatgcagagcttcaaatctaaggagtatgttcgcgagacattcgcttggatg 234 Query: 266 cactactactggtacctgaccaacgacggcattgagttcctc 307 ||||||||||||||||| || || || ||||||||||||||| Sbjct: 235 cactactactggtaccttacaaatgatggcattgagttcctc 276
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like protein mRNA, complete cds Length = 735 Score = 85.7 bits (43), Expect = 3e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 431 gagggtgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgct 490 |||||||| ||||| |||| |||||| |||||||||||| | | || ||| | ||| | Sbjct: 385 gagggtgataggccaaggtttggtgatagggatggttaccgtgctggtccaagaggtcca 444 Query: 491 cctggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 |||||||| |||| |||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 445 cctggtgaatttggaggtgagaagggtggagctccagctgattaccagcccgcatttagg 504 Query: 551 ggtgctggtgg 561 |||| |||||| Sbjct: 505 ggtggtggtgg 515 Score = 81.8 bits (41), Expect = 4e-12 Identities = 162/201 (80%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 108 gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 167 ||||||| ||||||||||||||| |||||||| | | || ||||||||||||||| || Sbjct: 64 gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 123 Query: 168 gccaagcacccccaggtcgatgcctcgaacct-cgagtcatcaagctcatgcagagcttc 226 || || || ||| | | |||| ||||||| | ||| || ||||| ||||||||||| Sbjct: 124 gcgaaacatcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagcttt 183 Query: 227 aagtccaaggagtacgtcagggagaccttctcgtggcagcactactactggtacctgacc 286 ||||| |||||||| || | |||||||| | ||| ||||||||||||||| || ||| Sbjct: 184 aagtcaaaggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttacc 243 Query: 287 aacgacggcattgagttcctc 307 || || ||||||||||||||| Sbjct: 244 aatgatggcattgagttcctc 264
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA, complete cds Length = 738 Score = 85.7 bits (43), Expect = 3e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 431 gagggtgacaggcctaggtatggtgacagggatggttacagaggaggcccacgtggtgct 490 |||||||| ||||| |||| |||||| |||||||||||| | | || ||| | ||| | Sbjct: 383 gagggtgataggccaaggtttggtgatagggatggttaccgtgctggtccaagaggtcca 442 Query: 491 cctggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 |||||||| |||| |||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 443 cctggtgaatttggaggtgagaagggtggagctccagctgattaccagcccgcatttagg 502 Query: 551 ggtgctggtgg 561 |||| |||||| Sbjct: 503 ggtggtggtgg 513 Score = 81.8 bits (41), Expect = 4e-12 Identities = 162/201 (80%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 108 gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 167 ||||||| ||||||||||||||| |||||||| | | || ||||||||||||||| || Sbjct: 62 gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 121 Query: 168 gccaagcacccccaggtcgatgcctcgaacct-cgagtcatcaagctcatgcagagcttc 226 || || || ||| | | |||| ||||||| | ||| || ||||| ||||||||||| Sbjct: 122 gcgaaacatcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagcttt 181 Query: 227 aagtccaaggagtacgtcagggagaccttctcgtggcagcactactactggtacctgacc 286 ||||| |||||||| || | |||||||| | ||| ||||||||||||||| || ||| Sbjct: 182 aagtcaaaggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttacc 241 Query: 287 aacgacggcattgagttcctc 307 || || ||||||||||||||| Sbjct: 242 aatgatggcattgagttcctc 262
>gb|EF051306.1| Gymnadenia conopsea 40S ribosomal protein-like mRNA, complete sequence Length = 827 Score = 81.8 bits (41), Expect = 4e-12 Identities = 196/247 (79%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 242 gtcagggagaccttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 ||||| ||||||||| ||||| ||||||||||||||| || || |||||||||||||| Sbjct: 202 gtcagtgagaccttcgcgtggatgcactactactggtatcttactaacgacggcattgaa 261 Query: 302 ttcctccgcaccttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtcc 361 || || | ||||| ||||| || || || ||||| ||||| ||||| |||||||| Sbjct: 262 tttctgaggacctttctcaatctaccatcagagattgtgcctgcgaccctgaagaagtca 321 Query: 362 gccaagcccccgtcccgccccttcggctctggcccacccggtgaccgccccaggggtcct 421 || ||||| || ||||| || || || ||| || || ||||||||| | ||||| ||| Sbjct: 322 gctaagccaccatcccgtccttttgg---tggacctccaggtgaccgcacgaggggccct 378 Query: 422 cctcgttttgagggtgacaggcctaggtatggtgacagggatggttacagaggaggccca 481 || ||||||||||| || ||||| || | ||| || |||||||| || |||||||| || Sbjct: 379 ccacgttttgagggagataggccaagatttggggatagggatggatatagaggaggacct 438 Query: 482 cgtggtg 488 ||||||| Sbjct: 439 cgtggtg 445 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 81 atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggagtc 140 ||||||||| | ||||||||||| | ||||||| ||||||||| ||||| ||||| || Sbjct: 40 atgatcatcccgaagaagaaccggcatgagatctccaagtacctattccaagagggcgtg 99 Query: 141 ttgtacgccaagaaggactacaacctggccaagcaccc 178 | ||||| |||||||||||||| ||||| |||||||| Sbjct: 100 ctctacgcgaagaaggactacaatctggcaaagcaccc 137
>emb|AJ538899.1|NTA538899 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-002 Length = 447 Score = 73.8 bits (37), Expect = 1e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 215 atgcagagcttcaagtccaaggagtacgtcagggagaccttctcgtggcagcactactac 274 |||||||| |||||||| ||||| ||||| | |||||||| | ||| ||||||||| Sbjct: 51 atgcagagtttcaagtcgaaggaatacgtgcgtgagacctttgcttggatgcactactat 110 Query: 275 tggtacctgaccaacgacggcattgagttcctc 307 ||||| |||||||| |||||||||||||||||| Sbjct: 111 tggtatctgaccaatgacggcattgagttcctc 143 Score = 67.9 bits (34), Expect = 6e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 512 aagggtggagctcctgctgactaccagccagctttcaggggtgctggtgg 561 |||||||||||||| |||||||||||||| || |||||||||| |||||| Sbjct: 345 aagggtggagctccagctgactaccagcctgcattcaggggtggtggtgg 394
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome (AT4G25740) mRNA, complete cds Length = 746 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 177 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 220 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 458 tgagaagggtggagctccagctgatttccagcc 490
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome (AT4G25740) mRNA, complete cds Length = 736 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 192 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 235 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 389 tgagaagggtggagctccagctgatttccagcc 421
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 565 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 130 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 173 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 411 tgagaagggtggagctccagctgatttccagcc 443
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 762 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 177 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 220 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 458 tgagaagggtggagctccagctgatttccagcc 490
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 190367 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 190324 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 190004 tgagaagggtggagctccagctgatttccagcc 189972
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 38860 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 38817 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 38497 tgagaagggtggagctccagctgatttccagcc 38465
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 71.9 bits (36), Expect = 4e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 5511 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 5468 Score = 42.1 bits (21), Expect = 3.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 508 tgagaagggtggagctcctgctgactaccagcc 540 |||||||||||||||||| ||||| | |||||| Sbjct: 5148 tgagaagggtggagctccagctgatttccagcc 5116
>gb|AC189309.1| Brassica rapa subsp. pekinensis clone KBrB034C07, complete sequence Length = 109282 Score = 69.9 bits (35), Expect = 2e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 206 atcaagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct: 104550 atcaagctcatgcagagtttcaaatccaaggagtacgttagggagac 104504 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 509 gagaagggtggagctcctgctgactaccagcc 540 ||||||||||||||||||||||| |||||||| Sbjct: 104154 gagaagggtggagctcctgctgattaccagcc 104123
>emb|AJ538646.1|NTA538646 Nicotiana tabacum cDNA-AFLP-fragment BC32-M2-013 Length = 257 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 491 cctggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 |||||||| |||| |||||| || ||||||||||| |||||||| || || ||||||||| Sbjct: 167 cctggtgagtttggtggtgaaaaaggtggagctccagctgactatcaacctgctttcagg 226 Query: 551 ggtgctggtgg 561 ||| ||||||| Sbjct: 227 ggttctggtgg 237
>emb|BX039192.1|CNS092EK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3DG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 730 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||| ||||||||||| || || |||| ||| ||| ||||||| | ||| Sbjct: 257 cactactactggtatctgaccaacgagggtatcgagtacctgcgcgccttcctgcatctg 316 Query: 326 ccgtctgagatcgtgcc 342 ||||| ||||||||||| Sbjct: 317 ccgtccgagatcgtgcc 333
>ref|XM_311275.2| Anopheles gambiae str. PEST ENSANGP00000017569 (ENSANGG00000015080), mRNA Length = 935 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||| ||||||||||| || || |||| ||| ||| ||||||| | ||| Sbjct: 311 cactactactggtatctgaccaacgagggtatcgagtacctgcgcgccttcctgcatctg 370 Query: 326 ccgtctgagatcgtgcc 342 ||||| ||||||||||| Sbjct: 371 ccgtccgagatcgtgcc 387
>emb|AJ538565.1|NTA538565 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-025 Length = 233 Score = 61.9 bits (31), Expect = 4e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 491 cctggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttcagg 550 |||||||| |||| |||||| || ||||||||||| ||||||| ||||| ||||||||| Sbjct: 63 cctggtgagtttggtggtgaaaaaggtggagctccacctgactatcagcctgctttcagg 4 Query: 551 ggt 553 ||| Sbjct: 3 ggt 1
>gb|DQ440253.1| Aedes aegypti clone AET-3036 ribosomal protein S10E mRNA, complete cds Length = 480 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 190 cactactactggtacctgaccaacgagggtattgagt 226
>gb|DQ066194.1| Ixodes scapularis isolate ISUFL81 40S ribosomal protein S10 mRNA, complete cds Length = 471 Score = 58.0 bits (29), Expect = 6e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||||||||||||||| ||||| ||| ||| || ||||||| ||||| Sbjct: 190 cactactactggtacctgaccaacgagggcatccagtacctgcgggacttcctccacctg 249 Query: 326 ccgtctgagatcgtgcccaacaccctcaagaag 358 || | ||||| ||||| ||||||||||||| Sbjct: 250 ccccccgagattgtgccggccaccctcaagaag 282
>emb|CR937754.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YG04AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 624 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 241 cactactactggtacctgaccaacgagggtattgagt 277
>emb|CR937727.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YH02AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 628 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 240 cactactactggtacctgaccaacgagggtattgagt 276
>emb|CR937726.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB1YH02BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 610 Score = 58.0 bits (29), Expect = 6e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 370 cactactactggtacctgaccaacgagggtattgagt 334
>emb|CT983890.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 625 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 506 ggtgagaagggtggagctcctgctgactaccagccagctttcaggggtgctggtgg 561 ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||| Sbjct: 211 ggtgacaaaggtggagctcctgctgactaccggccttctttcgggggtcctggtgg 266
>emb|CT983457.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 375 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 506 ggtgagaagggtggagctcctgctgactaccagccagctttcaggggtgctggtgg 561 ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||| Sbjct: 56 ggtgacaaaggtggagctcctgctgactaccggccttctttcgggggtcctggtgg 111
>gb|BC099929.1| Mus musculus plectin 1, mRNA (cDNA clone IMAGE:30056202), partial cds Length = 2616 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 389 cacttctactggtacctgaccaacgagggcattga 423
>ref|NM_201389.1| Mus musculus plectin 1 (Plec1), transcript variant 6, mRNA gb|AY480038.1| Mus musculus plectin 6 mRNA, complete cds Length = 15438 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AY088678.1| Arabidopsis thaliana clone 91769 mRNA, complete sequence Length = 768 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| ||||||||||||||||| || ||||||||| ||||| Sbjct: 482 tggtgagtttggaggtgaaaagggtggagctcctgcagattaccagccatctttc 536
>gb|AF188009.1|AF188009 Mus musculus plectin isoform plec 1 (Plec1) mRNA, partial cds Length = 824 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AF188008.1|AF188008 Mus musculus plectin isoform plec 1,2alpha (Plec1) mRNA, partial cds Length = 3075 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, complete sequence Length = 202844 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 135484 cacttctactggtacctgaccaacgagggcattga 135450
>ref|XM_001176979.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S10, transcript variant 2 (LOC580462), mRNA Length = 586 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 |||||||||||||||||||||||||| Sbjct: 226 cactactactggtacctgaccaacga 251
>ref|XM_001176834.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S10, transcript variant 1 (LOC580462), mRNA Length = 1184 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 |||||||||||||||||||||||||| Sbjct: 824 cactactactggtacctgaccaacga 849
>ref|XM_780517.2| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S10, transcript variant 2 (LOC580462), mRNA Length = 586 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 |||||||||||||||||||||||||| Sbjct: 226 cactactactggtacctgaccaacga 251
>ref|XM_001177349.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S10, transcript variant 1 (LOC580462), mRNA Length = 1184 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 |||||||||||||||||||||||||| Sbjct: 824 cactactactggtacctgaccaacga 849
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 19492656 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 19492715 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 19492716 ccgcccgagatcgtgccc 19492733
>gb|AY850935.1| Pectinaria gouldii ribosomal protein S10 mRNA, complete cds Length = 605 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 242 gtcagggagaccttctcgtggcagcactactactggtacctgaccaacga 291 |||| ||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 186 gtcaaggagaccttctgctggcgacactactactggtacctgacaaacga 235
>ref|NM_167668.1| Drosophila melanogaster Ribosomal protein S10b CG14206-RB, transcript variant B (RpS10b), mRNA Length = 746 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 291 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 350 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 351 ccgcccgagatcgtgccc 368
>ref|NM_134480.2| Drosophila melanogaster Ribosomal protein S10b CG14206-RC, transcript variant C (RpS10b), mRNA Length = 731 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 276 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 335 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 336 ccgcccgagatcgtgccc 353
>gb|AY070896.1| Drosophila melanogaster LP04958 full insert cDNA Length = 1020 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 545 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 604 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 605 ccgcccgagatcgtgccc 622
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 52.0 bits (26), Expect = 0.004 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 139773 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 139832 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 139833 ccgcccgagatcgtgccc 139850
>dbj|AK226326.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL05-14-A02 Length = 779 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 202 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 245 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 480 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 534
>ref|NM_124643.2| Arabidopsis thaliana structural constituent of ribosome (AT5G52650) mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 202 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 245 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 480 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 534
>gb|AY480027.1| Rattus norvegicus plectin 6 mRNA, complete cds Length = 15420 Score = 48.1 bits (24), Expect = 0.056 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcat 297 |||| ||||||||||||||||||||| ||||| Sbjct: 396 cacttctactggtacctgaccaacgagggcat 427
>gb|AY122932.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 571 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 130 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 173 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 408 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 462
>gb|AY065217.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 195 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 238 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 473 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 527
>ref|NM_022401.1| Rattus norvegicus plectin 1 (Plec1), mRNA emb|X59601.1|RNPLECT Rat mRNA for plectin Length = 15231 Score = 48.1 bits (24), Expect = 0.056 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcat 297 |||| ||||||||||||||||||||| ||||| Sbjct: 205 cacttctactggtacctgaccaacgagggcat 236
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 35900 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 35857 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Minus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 35528 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 35474
>dbj|AB049721.2| Pisum sativum ssa-11 mRNA for putative senescence-associated protein, complete cds Length = 1000 Score = 48.1 bits (24), Expect = 0.056 Identities = 36/40 (90%) Strand = Plus / Minus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgac 532 |||||| |||| ||| || ||||||||||||||||||||| Sbjct: 281 tggtgagtttggtggagacaagggtggagctcctgctgac 242
>emb|BX830280.1|CNS0A19J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 178 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 221 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 456 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 510
>emb|BX829499.1|CNS0A1BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 27 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 70 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 305 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 359
>emb|BX830062.1|CNS0A1D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 750 Score = 48.1 bits (24), Expect = 0.056 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 176 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 219 Score = 46.1 bits (23), Expect = 0.22 Identities = 47/55 (85%) Strand = Plus / Plus Query: 493 tggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||| |||| ||||| |||||||||||||| || || ||||||||| ||||| Sbjct: 454 tggtgagtttggaggtgaaaagggtggagctcccgcagattaccagccatctttc 508
>ref|XM_418029.2| PREDICTED: Gallus gallus hypothetical LOC419904 (LOC419904), mRNA Length = 600 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 ctactggtacctgaccaacgacggcat 297 ||||||||||||||||||||| ||||| Sbjct: 257 ctactggtacctgaccaacgagggcat 283
>emb|AM293611.1| Platanus x acerifolia partial mRNA for putative ribosomal protein S10 (rps10 gene), clone F5G Length = 224 Score = 44.1 bits (22), Expect = 0.88 Identities = 43/50 (86%) Strand = Plus / Plus Query: 265 gcactactactggtacctgaccaacgacggcattgagttcctccgcacct 314 ||||||||||||||| || |||||||| || || || |||||||| |||| Sbjct: 26 gcactactactggtatctcaccaacgatgggatcgaattcctccgaacct 75
>gb|DQ226795.1| Boechera divaricarpa isolate SLW-B-C05 mRNA sequence Length = 448 Score = 44.1 bits (22), Expect = 0.88 Identities = 46/54 (85%) Strand = Plus / Plus Query: 494 ggtgattttgctggtgagaagggtggagctcctgctgactaccagccagctttc 547 |||||||||| || || |||||||||||||| ||||| | ||||||| ||||| Sbjct: 246 ggtgattttggtgccgaaaagggtggagctccagctgatttccagccatctttc 299
>ref|NM_123516.2| Arabidopsis thaliana structural constituent of ribosome (AT5G41520) mRNA, complete cds Length = 807 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>gb|AY231709.1| Drosophila yakuba clone yak-em_CG14206 mRNA sequence Length = 405 Score = 44.1 bits (22), Expect = 0.88 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 ||||||||||||||||| |||||||| Sbjct: 115 cactactactggtacctcaccaacga 140
>gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, complete sequence Length = 154644 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Minus Query: 793 atgagctctttgatattaagac 814 |||||||||||||||||||||| Sbjct: 84199 atgagctctttgatattaagac 84178
>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence Length = 171700 Score = 44.1 bits (22), Expect = 0.88 Identities = 22/22 (100%) Strand = Plus / Plus Query: 793 atgagctctttgatattaagac 814 |||||||||||||||||||||| Sbjct: 42457 atgagctctttgatattaagac 42478
>gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 780 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 543 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 19 aaccgccgtgagatctccaagtacctcttc 48
>gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 781 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Minus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 5407 aaccgccgtgagatctccaagtacctcttc 5378
>emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 107 aaccgccgtgagatctccaagtacctcttc 136
>emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 783 Score = 44.1 bits (22), Expect = 0.88 Identities = 28/30 (93%) Strand = Plus / Plus Query: 99 aaccgccgcgagatctgcaagtacctcttc 128 |||||||| ||||||| ||||||||||||| Sbjct: 91 aaccgccgtgagatctccaagtacctcttc 120
>gb|EF078852.1| Human herpesvirus 8 isolate HKS56 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078851.1| Human herpesvirus 8 isolate HKS67 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078850.1| Human herpesvirus 8 isolate HKS61 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078849.1| Human herpesvirus 8 isolate HKS58 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078848.1| Human herpesvirus 8 isolate HKS52 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078847.1| Human herpesvirus 8 isolate HKS50 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078846.1| Human herpesvirus 8 isolate HKS47 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078844.1| Human herpesvirus 8 isolate HKS34 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078843.1| Human herpesvirus 8 isolate HKS27 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078842.1| Human herpesvirus 8 isolate HKS24 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078841.1| Human herpesvirus 8 isolate HKS23 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078840.1| Human herpesvirus 8 isolate HKS20 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078839.1| Human herpesvirus 8 isolate HKS19 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078838.1| Human herpesvirus 8 isolate HKS13 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078837.1| Human herpesvirus 8 isolate HKS9 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078836.1| Human herpesvirus 8 isolate SAKS34 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078835.1| Human herpesvirus 8 isolate SAKS32 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078834.1| Human herpesvirus 8 isolate SAKS22 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078833.1| Human herpesvirus 8 isolate 021K ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078832.1| Human herpesvirus 8 isolate RKS4 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078831.1| Human herpesvirus 8 isolate RKS3/8 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078830.1| Human herpesvirus 8 isolate RKS1/6 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078829.1| Human herpesvirus 8 isolate ST2/3 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078828.1| Human herpesvirus 8 isolate OKS4 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078827.1| Human herpesvirus 8 isolate 431K/N ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078817.1| Human herpesvirus 8 isolate HKS54 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078815.1| Human herpesvirus 8 isolate OKS8 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078814.1| Human herpesvirus 8 isolate OKS7 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078813.1| Human herpesvirus 8 isolate AKS15 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078812.1| Human herpesvirus 8 isolate AKS20 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078811.1| Human herpesvirus 8 isolate 401K ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078810.1| Human herpesvirus 8 isolate RKS5 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078809.1| Human herpesvirus 8 isolate RKS2/7 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078808.1| Human herpesvirus 8 isolate ST1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078807.1| Human herpesvirus 8 isolate OKS3 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078806.1| Human herpesvirus 8 isolate HKS40 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078805.1| Human herpesvirus 8 isolate HKS29 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078804.1| Human herpesvirus 8 isolate HKS21 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078803.1| Human herpesvirus 8 isolate SAKS24 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078802.1| Human herpesvirus 8 isolate EKS1/2 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078801.1| Human herpesvirus 8 isolate SKS7 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078800.1| Human herpesvirus 8 isolate SKS6 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078799.1| Human herpesvirus 8 isolate SKS2 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078798.1| Human herpesvirus 8 isolate SKS1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078797.1| Human herpesvirus 8 isolate RGKS5 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078796.1| Human herpesvirus 8 isolate RGKS4 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078795.1| Human herpesvirus 8 isolate BKS20 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078794.1| Human herpesvirus 8 isolate BKS15 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078793.1| Human herpesvirus 8 isolate JSC1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078792.1| Human herpesvirus 8 isolate BC3 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078791.1| Human herpesvirus 8 isolate BC2 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078790.1| Human herpesvirus 8 isolate BKS14 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078789.1| Human herpesvirus 8 isolate BCBL-1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078788.1| Human herpesvirus 8 isolate APK1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078787.1| Human herpesvirus 8 isolate BKS18 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078786.1| Human herpesvirus 8 isolate SAKS21 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078785.1| Human herpesvirus 8 isolate OKS9 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078784.1| Human herpesvirus 8 isolate ZKS1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078783.1| Human herpesvirus 8 isolate BKS10 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078782.1| Human herpesvirus 8 isolate BKS1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078781.1| Human herpesvirus 8 isolate BCBL-B ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078780.1| Human herpesvirus 8 isolate ZKS7 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078779.1| Human herpesvirus 8 isolate ZKS5 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078778.1| Human herpesvirus 8 isolate BKS8 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078777.1| Human herpesvirus 8 isolate BCP1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078776.1| Human herpesvirus 8 isolate ASM-K3 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078775.1| Human herpesvirus 8 isolate SKS8 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078774.1| Human herpesvirus 8 isolate BKS11 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078773.1| Human herpesvirus 8 isolate BKS3/4 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078772.1| Human herpesvirus 8 isolate AKS2 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078771.1| Human herpesvirus 8 isolate AKS1 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078770.1| Human herpesvirus 8 isolate C282 ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|EF078769.1| Human herpesvirus 8 isolate BCBL-R ORF75E gene, partial cds Length = 854 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 207 gccgtggaggcggcggtggca 187
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 133377 gccgtggaggcggcggtggca 133357
>gb|BT016327.1| Zea mays clone Contig160 mRNA sequence Length = 717 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 306 ggccgtggaggcggcggtggc 326
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 ggtgaccgccccaggggtcct 421 ||||||||||||||||||||| Sbjct: 94677 ggtgaccgccccaggggtcct 94697
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 133230 gccgtggaggcggcggtggca 133210
>gb|AF496729.1| Zea mays cultivar C_9 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 370 ggccgtggaggcggcggtggc 390
>gb|AF496728.1| Zea mays cultivar D_9 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496727.1| Zea mays cultivar D_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496726.1| Zea mays cultivar F_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 370 ggccgtggaggcggcggtggc 390
>gb|AF496724.1| Zea mays cultivar D_7 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 739 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 377 ggccgtggaggcggcggtggc 397
>gb|AF496722.1| Zea mays cultivar B84 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496720.1| Zea mays cultivar 684 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496719.1| Zea mays cultivar IVANA glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 749 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 387 ggccgtggaggcggcggtggc 407
>gb|AF496717.1| Zea mays cultivar I_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 370 ggccgtggaggcggcggtggc 390
>gb|AF496716.1| Zea mays cultivar B73 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 735 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 373 ggccgtggaggcggcggtggc 393
>gb|AF496713.1| Zea mays cultivar B_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 729 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 367 ggccgtggaggcggcggtggc 387
>gb|AF496711.1| Zea mays cultivar F_3 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496709.1| Zea mays cultivar H_5 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 732 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 370 ggccgtggaggcggcggtggc 390
>gb|AF496708.1| Zea mays cultivar H_3 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496707.1| Zea mays cultivar J40 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496705.1| Zea mays cultivar B_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 705 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 343 ggccgtggaggcggcggtggc 363
>gb|AF496704.1| Zea mays cultivar F_6 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 750 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 388 ggccgtggaggcggcggtggc 408
>gb|AF496703.1| Zea mays cultivar C_5 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 754 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 392 ggccgtggaggcggcggtggc 412
>gb|AF496702.1| Zea mays cultivar H_1 glycine-rich RNA binding protein gene, 3'UTR and partial cds Length = 749 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 387 ggccgtggaggcggcggtggc 407
>emb|AL358092.26| Human DNA sequence from clone RP11-336A2 on chromosome 10, complete sequence Length = 103816 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 gctggtggtgccaggcccttt 574 ||||||||||||||||||||| Sbjct: 103255 gctggtggtgccaggcccttt 103275
>emb|AL160174.12| Human DNA sequence from clone RP11-333H4 on chromosome 10, complete sequence Length = 130574 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 554 gctggtggtgccaggcccttt 574 ||||||||||||||||||||| Sbjct: 1439 gctggtggtgccaggcccttt 1459
>gb|U82242.2|KSU82242 Kaposi's sarcoma-associated herpesvirus chemokine receptor homolog gene, complete cds and large virion protein gene, partial cds Length = 5077 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 gccgtggaggcggcggtggca 596 ||||||||||||||||||||| Sbjct: 3754 gccgtggaggcggcggtggca 3734
>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence Length = 198777 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcattgagttcctccgcacct 314 ||||||||||||||||||||| Sbjct: 35514 gcattgagttcctccgcacct 35494
>gb|AF034945.1|AF034945 Zea mays glycine-rich RNA binding protein (GRP) mRNA, complete cds Length = 790 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 ggccgtggaggcggcggtggc 595 ||||||||||||||||||||| Sbjct: 336 ggccgtggaggcggcggtggc 356
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 ggtgaccgccccaggggtcct 421 ||||||||||||||||||||| Sbjct: 27810 ggtgaccgccccaggggtcct 27830 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 128,777,126 Number of extensions: 6802761 Number of successful extensions: 139082 Number of sequences better than 10.0: 188 Number of HSP's gapped: 139051 Number of HSP's successfully gapped: 249 Length of query: 921 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 898 Effective length of database: 18,503,978,556 Effective search space: 16616572743288 Effective search space used: 16616572743288 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
