| Clone Name | FLbaf110l01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060135.1| Oryza sativa (japonica cultivar-group) Os04g0570500 (Os04g0570500) mRNA, complete cds Length = 1616 Score = 135 bits (68), Expect = 6e-28 Identities = 355/450 (78%), Gaps = 3/450 (0%) Strand = Plus / Plus Query: 1032 agaaggtgccaagtccgggatcacttgggaagagtacaagtccatgacattcactgctca 1091 |||||||| || |||||| |||| ||||| ||||||| |||| ||| ||||| | |||| Sbjct: 1034 agaaggtgtgaattccgggttcacatgggaggagtacaggtccttgaaattcagtactca 1093 Query: 1092 ggttacgaatgagatatctcgcgtcagtaacgtggcccctggaatattcaggaaaacact 1151 ||||| |||||| || |||| | |||||||| | |||||| | |||||||||||| | Sbjct: 1094 ggttatgaatgaaattactcgaattagtaacgtcacacctggagttttcaggaaaacatt 1153 Query: 1152 aacggacgtgcaagtgaaaggctacacaattcccgccggctggctggtgatgatcagccc 1211 ||| || |||||||||||||| || |||||||| |||| ||| | || ||||| ||||| Sbjct: 1154 aacagatgtgcaagtgaaaggatatacaattccatccgggtggttagtcatgataagccc 1213 Query: 1212 catggctgtccatctgaacccagaattgttcgaagatccgttgacatttaacccatggag 1271 |||||| || || || |||||| |||||||||| ||||| | | |||| | |||||||| Sbjct: 1214 catggcagttcacctaaacccaaaattgttcgaggatccacttaaatttgatccatggag 1273 Query: 1272 gtggcaggatgagtcgaagaagagcaccatgctgaagaacttcatgccattcggaggggg 1331 |||| ||| || ||||| ||| | |||||||| || | ||||||||| ||||| || Sbjct: 1274 gtggagggagga---gaagagaagctcgatgctgaaaaattacatgccatttggaggagg 1330 Query: 1332 cataaggctctgtgtgggagcagagttcagcaggattcagatcgcactcttccttcacac 1391 | | ||||| ||| | || |||||||| |||| | || || ||||||||||| |||| Sbjct: 1331 cgtcaggctgtgtctcggggcagagtttagcaagcttttcattgcactcttcctccacat 1390 Query: 1392 cctggtgacaaagtacagatggaaggagataaaaggtggcgaagtacaacgcatatcgga 1451 | ||||||| |||| || |||| |||||| |||| || ||||||| |||||||| || Sbjct: 1391 cttggtgaccgagtatagttggacggagattgaaggaggggaagtactgcgcatatcaga 1450 Query: 1452 gatcgtgtttccggagggctatcacatcca 1481 |||| |||| || | |||||||||||||| Sbjct: 1451 gatcatgttccctcaaggctatcacatcca 1480 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 168 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 227 Query: 223 a 223 | Sbjct: 228 a 228
>emb|AJ277790.1|OSA277790 Oryza sativa mRNA for cytochrome P450 (dwf1 gene) Length = 1821 Score = 135 bits (68), Expect = 6e-28 Identities = 355/450 (78%), Gaps = 3/450 (0%) Strand = Plus / Plus Query: 1032 agaaggtgccaagtccgggatcacttgggaagagtacaagtccatgacattcactgctca 1091 |||||||| || |||||| |||| ||||| ||||||| |||| ||| ||||| | |||| Sbjct: 1096 agaaggtgtgaattccgggttcacatgggaggagtacaggtccttgaaattcagtactca 1155 Query: 1092 ggttacgaatgagatatctcgcgtcagtaacgtggcccctggaatattcaggaaaacact 1151 ||||| |||||| || |||| | |||||||| | |||||| | |||||||||||| | Sbjct: 1156 ggttatgaatgaaattactcgaattagtaacgtcacacctggagttttcaggaaaacatt 1215 Query: 1152 aacggacgtgcaagtgaaaggctacacaattcccgccggctggctggtgatgatcagccc 1211 ||| || |||||||||||||| || |||||||| |||| ||| | || ||||| ||||| Sbjct: 1216 aacagatgtgcaagtgaaaggatatacaattccatccgggtggttagtcatgataagccc 1275 Query: 1212 catggctgtccatctgaacccagaattgttcgaagatccgttgacatttaacccatggag 1271 |||||| || || || |||||| |||||||||| ||||| | | |||| | |||||||| Sbjct: 1276 catggcagttcacctaaacccaaaattgttcgaggatccacttaaatttgatccatggag 1335 Query: 1272 gtggcaggatgagtcgaagaagagcaccatgctgaagaacttcatgccattcggaggggg 1331 |||| ||| || ||||| ||| | |||||||| || | ||||||||| ||||| || Sbjct: 1336 gtggagggagga---gaagagaagctcgatgctgaaaaattacatgccatttggaggagg 1392 Query: 1332 cataaggctctgtgtgggagcagagttcagcaggattcagatcgcactcttccttcacac 1391 | | ||||| ||| | || |||||||| |||| | || || ||||||||||| |||| Sbjct: 1393 cgtcaggctgtgtctcggggcagagtttagcaagcttttcattgcactcttcctccacat 1452 Query: 1392 cctggtgacaaagtacagatggaaggagataaaaggtggcgaagtacaacgcatatcgga 1451 | ||||||| |||| || |||| |||||| |||| || ||||||| |||||||| || Sbjct: 1453 cttggtgaccgagtatagttggacggagattgaaggaggggaagtactgcgcatatcaga 1512 Query: 1452 gatcgtgtttccggagggctatcacatcca 1481 |||| |||| || | |||||||||||||| Sbjct: 1513 gatcatgttccctcaaggctatcacatcca 1542 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 230 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 289 Query: 223 a 223 | Sbjct: 290 a 290
>dbj|AK103336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126A02, full insert sequence Length = 1617 Score = 135 bits (68), Expect = 6e-28 Identities = 355/450 (78%), Gaps = 3/450 (0%) Strand = Plus / Plus Query: 1032 agaaggtgccaagtccgggatcacttgggaagagtacaagtccatgacattcactgctca 1091 |||||||| || |||||| |||| ||||| ||||||| |||| ||| ||||| | |||| Sbjct: 1035 agaaggtgtgaattccgggttcacatgggaggagtacaggtccttgaaattcagtactca 1094 Query: 1092 ggttacgaatgagatatctcgcgtcagtaacgtggcccctggaatattcaggaaaacact 1151 ||||| |||||| || |||| | |||||||| | |||||| | |||||||||||| | Sbjct: 1095 ggttatgaatgaaattactcgaattagtaacgtcacacctggagttttcaggaaaacatt 1154 Query: 1152 aacggacgtgcaagtgaaaggctacacaattcccgccggctggctggtgatgatcagccc 1211 ||| || |||||||||||||| || |||||||| |||| ||| | || ||||| ||||| Sbjct: 1155 aacagatgtgcaagtgaaaggatatacaattccatccgggtggttagtcatgataagccc 1214 Query: 1212 catggctgtccatctgaacccagaattgttcgaagatccgttgacatttaacccatggag 1271 |||||| || || || |||||| |||||||||| ||||| | | |||| | |||||||| Sbjct: 1215 catggcagttcacctaaacccaaaattgttcgaggatccacttaaatttgatccatggag 1274 Query: 1272 gtggcaggatgagtcgaagaagagcaccatgctgaagaacttcatgccattcggaggggg 1331 |||| ||| || ||||| ||| | |||||||| || | ||||||||| ||||| || Sbjct: 1275 gtggagggagga---gaagagaagctcgatgctgaaaaattacatgccatttggaggagg 1331 Query: 1332 cataaggctctgtgtgggagcagagttcagcaggattcagatcgcactcttccttcacac 1391 | | ||||| ||| | || |||||||| |||| | || || ||||||||||| |||| Sbjct: 1332 cgtcaggctgtgtctcggggcagagtttagcaagcttttcattgcactcttcctccacat 1391 Query: 1392 cctggtgacaaagtacagatggaaggagataaaaggtggcgaagtacaacgcatatcgga 1451 | ||||||| |||| || |||| |||||| |||| || ||||||| |||||||| || Sbjct: 1392 cttggtgaccgagtatagttggacggagattgaaggaggggaagtactgcgcatatcaga 1451 Query: 1452 gatcgtgtttccggagggctatcacatcca 1481 |||| |||| || | |||||||||||||| Sbjct: 1452 gatcatgttccctcaaggctatcacatcca 1481 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 169 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 228 Query: 223 a 223 | Sbjct: 229 a 229
>ref|NM_001066180.1| Oryza sativa (japonica cultivar-group) Os07g0482900 (Os07g0482900) mRNA, complete cds Length = 1215 Score = 107 bits (54), Expect = 1e-19 Identities = 159/194 (81%) Strand = Plus / Plus Query: 1057 tgggaagagtacaagtccatgacattcactgctcaggttacgaatgagatatctcgcgtc 1116 ||||| |||||||||||| | | ||||||| |||||||||||||||| || |||| | Sbjct: 814 tgggaggagtacaagtccttaaaattcactactcaggttacgaatgaaattactcgaatt 873 Query: 1117 agtaacgtggcccctggaatattcaggaaaacactaacggacgtgcaagtgaaaggctac 1176 ||||| || || |||||| | ||||| |||||||| || |||||||||||||| || || Sbjct: 874 agtaatgttgcacctggagttttcagaaaaacactgacagacgtgcaagtgaatggatat 933 Query: 1177 acaattcccgccggctggctggtgatgatcagccccatggctgtccatctgaacccagaa 1236 |||||||| |||| ||| | || ||||| ||||||||||| || || || ||||||||| Sbjct: 934 acaattccgtccgggtggttagtcatgattagccccatggcagttcacctaaacccagaa 993 Query: 1237 ttgttcgaagatcc 1250 ||||| || ||||| Sbjct: 994 ttgtttgaggatcc 1007 Score = 44.1 bits (22), Expect = 1.7 Identities = 67/82 (81%) Strand = Plus / Plus Query: 682 ttcttccagggattggtctccttcccgctgtatttccctgggacaacattctacagatgc 741 ||||||||||| |||| || ||||| | |||||||| |||||| | |||||| ||||| Sbjct: 442 ttcttccaggggatggtgtctttcccaatatatttcccagggacatcgttctaccgatgc 501 Query: 742 atacagggaaggaaaaacgtgc 763 || ||||| || ||||| |||| Sbjct: 502 atgcagggtagaaaaaatgtgc 523
>dbj|AK241333.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065144I22, full insert sequence Length = 3740 Score = 91.7 bits (46), Expect = 8e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 255 ctacaagcaaaggctgaaaaggtacgggccggtgttcaagacgagcctggttgggcagcc 314 ||||||| ||||||| || || || ||||| | |||||||| ||||| || |||||||| Sbjct: 228 ctacaaggaaaggctcaagagatatgggccaatcttcaagacaagcctagtggggcagcc 287 Query: 315 tgtggtggtgtccatggacgctgaggtgaaccgcttcatcttccagcaggagggcaagct 374 | |||| | ||| | || | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 288 tctggtcatttccctcgatccagaggtgaaccggttcgtgttccagcaggagggcaagct 347 Query: 375 gttccggagctggtacccggacacggccaacaacatcttcggcaag 420 |||||| ||||||||||| || ||| | |||| |||||| |||||| Sbjct: 348 gttccgtagctggtacccagagacgacgaacaccatctttggcaag 393 Score = 77.8 bits (39), Expect = 1e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 1117 agtaacgtggcccctggaatattcaggaaaacactaacggacgtgcaagtgaaaggctac 1176 |||||||| || |||||||| ||||||||||| ||| | || ||| ||||||||||||| Sbjct: 835 agtaacgttgcacctggaattttcaggaaaaccctagcagatgtgaaagtgaaaggctat 894 Query: 1177 acaattcccgccggctggctggtgatgatcagccccatggctgtccatctgaacccagaa 1236 ||||| || || || ||||| || ||||| ||||||||||| || |||| |||||| | Sbjct: 895 acaatcccagctgggtggctagtcatgattagccccatggcagttgatctaaacccaaca 954 Query: 1237 ttgttcgaaga 1247 ||||| ||||| Sbjct: 955 ttgtttgaaga 965 Score = 46.1 bits (23), Expect = 0.43 Identities = 56/67 (83%) Strand = Plus / Plus Query: 682 ttcttccagggattggtctccttcccgctgtatttccctgggacaacattctacagatgc 741 |||||||||||| ||||||| ||||| | ||||| || |||||| |||| ||| ||||| Sbjct: 655 ttcttccagggaatggtctctttccccatatattttccagggacatcattttaccgatgc 714 Query: 742 atacagg 748 || |||| Sbjct: 715 atgcagg 721
>dbj|AK067592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110N20, full insert sequence Length = 2361 Score = 91.7 bits (46), Expect = 8e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 255 ctacaagcaaaggctgaaaaggtacgggccggtgttcaagacgagcctggttgggcagcc 314 ||||||| ||||||| || || || ||||| | |||||||| ||||| || |||||||| Sbjct: 228 ctacaaggaaaggctcaagagatatgggccaatcttcaagacaagcctagtggggcagcc 287 Query: 315 tgtggtggtgtccatggacgctgaggtgaaccgcttcatcttccagcaggagggcaagct 374 | |||| | ||| | || | ||||||||||| ||| | |||||||||||||||||||| Sbjct: 288 tctggtcatttccctcgatccagaggtgaaccggttcgtgttccagcaggagggcaagct 347 Query: 375 gttccggagctggtacccggacacggccaacaacatcttcggcaag 420 |||||| ||||||||||| || ||| | |||| |||||| |||||| Sbjct: 348 gttccgtagctggtacccagagacgacgaacaccatctttggcaag 393 Score = 77.8 bits (39), Expect = 1e-10 Identities = 108/131 (82%) Strand = Plus / Plus Query: 1117 agtaacgtggcccctggaatattcaggaaaacactaacggacgtgcaagtgaaaggctac 1176 |||||||| || |||||||| ||||||||||| ||| | || ||| ||||||||||||| Sbjct: 1766 agtaacgttgcacctggaattttcaggaaaaccctagcagatgtgaaagtgaaaggctat 1825 Query: 1177 acaattcccgccggctggctggtgatgatcagccccatggctgtccatctgaacccagaa 1236 ||||| || || || ||||| || ||||| ||||||||||| || |||| |||||| | Sbjct: 1826 acaatcccagctgggtggctagtcatgattagccccatggcagttgatctaaacccaaca 1885 Query: 1237 ttgttcgaaga 1247 ||||| ||||| Sbjct: 1886 ttgtttgaaga 1896 Score = 46.1 bits (23), Expect = 0.43 Identities = 56/67 (83%) Strand = Plus / Plus Query: 682 ttcttccagggattggtctccttcccgctgtatttccctgggacaacattctacagatgc 741 |||||||||||| ||||||| ||||| | ||||| || |||||| |||| ||| ||||| Sbjct: 655 ttcttccagggaatggtctctttccccatatattttccagggacatcattttaccgatgc 714 Query: 742 atacagg 748 || |||| Sbjct: 715 atgcagg 721
>ref|NM_001074239.1| Oryza sativa (japonica cultivar-group) Os11g0289700 (Os11g0289700) mRNA, complete cds Length = 1789 Score = 73.8 bits (37), Expect = 2e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1138 ttcaggaaaacactaacggacgtgcaagtgaaaggctacacaattcccgccggctggctg 1197 ||||||||| ||||||| ||||||||||| || || || |||||||| | || ||||| Sbjct: 1175 ttcaggaaagcactaacagacgtgcaagtaaacggatatacaattccgtctgggtggcta 1234 Query: 1198 gtgatgatcagccccatggctgtccatctgaacccagaattgttcgaagatcc 1250 || ||||| |||||||||| || ||||| |||||| |||||||||| ||||| Sbjct: 1235 gtcatgattagccccatgggagtgcatctaaacccaaaattgttcgaggatcc 1287
>dbj|AK065302.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N23, full insert sequence Length = 1790 Score = 73.8 bits (37), Expect = 2e-09 Identities = 94/113 (83%) Strand = Plus / Plus Query: 1138 ttcaggaaaacactaacggacgtgcaagtgaaaggctacacaattcccgccggctggctg 1197 ||||||||| ||||||| ||||||||||| || || || |||||||| | || ||||| Sbjct: 1177 ttcaggaaagcactaacagacgtgcaagtaaacggatatacaattccgtctgggtggcta 1236 Query: 1198 gtgatgatcagccccatggctgtccatctgaacccagaattgttcgaagatcc 1250 || ||||| |||||||||| || ||||| |||||| |||||||||| ||||| Sbjct: 1237 gtcatgattagccccatgggagtgcatctaaacccaaaattgttcgaggatcc 1289
>dbj|AK060292.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-E01, full insert sequence Length = 1726 Score = 69.9 bits (35), Expect = 3e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 1138 ttcaggaaaacactaacggacgtgcaagtgaaaggctacacaattcccgccggctggctg 1197 ||||||||| ||||||| ||||||||||| || || || |||||||| | || ||||| Sbjct: 1183 ttcaggaaagcactaacagacgtgcaagtaaacggatatacaattccgtctgggtggcta 1242 Query: 1198 gtgatgatcagccccatggctgtccatctgaacccagaattgttcga 1244 || ||||| |||||||||| || ||||| |||||| |||||||||| Sbjct: 1243 gtcatgattagccccatgggagtgcatctaaacccaaaattgttcga 1289
>emb|CR855186.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0111L12, complete sequence Length = 76828 Score = 67.9 bits (34), Expect = 1e-07 Identities = 40/42 (95%) Strand = Plus / Minus Query: 181 tccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 47699 tccatgggcctcccgctcgttggcgagacgttccagttcttc 47658 Score = 65.9 bits (33), Expect = 5e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 280 gggccggtgttcaagacgagcctggttgggcagcctgtggtggtgtccatggacgctgag 339 |||||| | |||||||| |||||||| ||||| || ||||||||||| |||| ||| Sbjct: 47521 gggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggag 47462 Query: 340 gtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 |||||| | | | |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 47461 ctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggac 47405 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 19143 ttccagcaggaggggaagctgttcgagagctggtacccggacac 19100 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1129 cctggaatattcaggaaaacactaacggacgtgcaagtgaaagg 1172 |||||| | |||||||||||| |||| || |||||||||||||| Sbjct: 35922 cctggagttttcaggaaaacattaacagatgtgcaagtgaaagg 35879 Score = 46.1 bits (23), Expect = 0.43 Identities = 62/75 (82%) Strand = Plus / Minus Query: 1201 atgatcagccccatggctgtccatctgaacccagaattgttcgaagatccgttgacattt 1260 ||||| ||||||||||| || || || |||||| |||||||||| ||||| | | |||| Sbjct: 35735 atgataagccccatggcagttcacctaaacccaaaattgttcgaggatccacttaaattt 35676 Query: 1261 aacccatggaggtgg 1275 | |||||||||||| Sbjct: 35675 gatccatggaggtgg 35661 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 17132 gaagatccgttggccttcaatccatggaggtggcagg 17096 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 38923 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 38864 Query: 223 a 223 | Sbjct: 38863 a 38863
>ref|NM_001060136.1| Oryza sativa (japonica cultivar-group) Os04g0570600 (Os04g0570600) mRNA, complete cds Length = 1834 Score = 67.9 bits (34), Expect = 1e-07 Identities = 40/42 (95%) Strand = Plus / Plus Query: 181 tccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 193 tccatgggcctcccgctcgttggcgagacgttccagttcttc 234 Score = 65.9 bits (33), Expect = 5e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 280 gggccggtgttcaagacgagcctggttgggcagcctgtggtggtgtccatggacgctgag 339 |||||| | |||||||| |||||||| ||||| || ||||||||||| |||| ||| Sbjct: 292 gggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggag 351 Query: 340 gtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 |||||| | | | |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 352 ctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggac 408
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 67.9 bits (34), Expect = 1e-07 Identities = 40/42 (95%) Strand = Plus / Minus Query: 181 tccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 28693878 tccatgggcctcccgctcgttggcgagacgttccagttcttc 28693837 Score = 65.9 bits (33), Expect = 5e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 280 gggccggtgttcaagacgagcctggttgggcagcctgtggtggtgtccatggacgctgag 339 |||||| | |||||||| |||||||| ||||| || ||||||||||| |||| ||| Sbjct: 28693701 gggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggag 28693642 Query: 340 gtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 |||||| | | | |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 28693641 ctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggac 28693585 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 28649876 ttccagcaggaggggaagctgttcgagagctggtacccggacac 28649833 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1129 cctggaatattcaggaaaacactaacggacgtgcaagtgaaagg 1172 |||||| | |||||||||||| |||| || |||||||||||||| Sbjct: 28678284 cctggagttttcaggaaaacattaacagatgtgcaagtgaaagg 28678241 Score = 46.1 bits (23), Expect = 0.43 Identities = 62/75 (82%) Strand = Plus / Minus Query: 1201 atgatcagccccatggctgtccatctgaacccagaattgttcgaagatccgttgacattt 1260 ||||| ||||||||||| || || || |||||| |||||||||| ||||| | | |||| Sbjct: 28678097 atgataagccccatggcagttcacctaaacccaaaattgttcgaggatccacttaaattt 28678038 Query: 1261 aacccatggaggtgg 1275 | |||||||||||| Sbjct: 28678037 gatccatggaggtgg 28678023 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 28647867 gaagatccgttggccttcaatccatggaggtggcagg 28647831 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 28681289 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 28681230 Query: 223 a 223 | Sbjct: 28681229 a 28681229
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 67.9 bits (34), Expect = 1e-07 Identities = 40/42 (95%) Strand = Plus / Plus Query: 181 tccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 97080 tccatgggcctcccgctcgttggcgagacgttccagttcttc 97121 Score = 65.9 bits (33), Expect = 5e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 280 gggccggtgttcaagacgagcctggttgggcagcctgtggtggtgtccatggacgctgag 339 |||||| | |||||||| |||||||| ||||| || ||||||||||| |||| ||| Sbjct: 97257 gggccgatattcaagaccagcctggtggggcacccggtggtggtgtcggccgacgaggag 97316 Query: 340 gtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 |||||| | | | |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 97317 ctgaaccacatggtgttccagcaggaggggcagctgttccagagctggtacccggac 97373 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 141082 ttccagcaggaggggaagctgttcgagagctggtacccggacac 141125 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1129 cctggaatattcaggaaaacactaacggacgtgcaagtgaaagg 1172 |||||| | |||||||||||| |||| || |||||||||||||| Sbjct: 112674 cctggagttttcaggaaaacattaacagatgtgcaagtgaaagg 112717 Score = 46.1 bits (23), Expect = 0.43 Identities = 62/75 (82%) Strand = Plus / Plus Query: 1201 atgatcagccccatggctgtccatctgaacccagaattgttcgaagatccgttgacattt 1260 ||||| ||||||||||| || || || |||||| |||||||||| ||||| | | |||| Sbjct: 112861 atgataagccccatggcagttcacctaaacccaaaattgttcgaggatccacttaaattt 112920 Query: 1261 aacccatggaggtgg 1275 | |||||||||||| Sbjct: 112921 gatccatggaggtgg 112935 Score = 42.1 bits (21), Expect = 6.7 Identities = 51/61 (83%) Strand = Plus / Plus Query: 163 gggaggctccctccaggatccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||| ||||| || ||||||||| ||||| | | || ||||| |||||||||||| Sbjct: 109669 gggaggcttcctcctggctccatgggcttccctattattggtgagaccttccagttcttc 109728 Query: 223 a 223 | Sbjct: 109729 a 109729 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 143091 gaagatccgttggccttcaatccatggaggtggcagg 143127
>dbj|AK106747.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-C03, full insert sequence Length = 1835 Score = 67.9 bits (34), Expect = 1e-07 Identities = 40/42 (95%) Strand = Plus / Plus Query: 181 tccatgggcctccctctcgtcggcgagacgttccagttcttc 222 |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 194 tccatgggcctcccgctcgttggcgagacgttccagttcttc 235 Score = 60.0 bits (30), Expect = 3e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggac 396 |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 368 ttccagcaggaggggcagctgttccagagctggtacccggac 409
>emb|CR855165.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0139P06, complete sequence Length = 98839 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 94803 ttccagcaggaggggaagctgttcgagagctggtacccggacac 94760 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 92792 gaagatccgttggccttcaatccatggaggtggcagg 92756
>ref|NM_001060134.1| Oryza sativa (japonica cultivar-group) Os04g0570000 (Os04g0570000) mRNA, complete cds Length = 2185 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 504 ttccagcaggaggggaagctgttcgagagctggtacccggacac 547 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 1395 gaagatccgttggccttcaatccatggaggtggcagg 1431
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 27529198 ttccagcaggaggggaagctgttcgagagctggtacccggacac 27529155 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 ||||||||||| | ||||| |||||||||||||||| Sbjct: 27527115 gaagatccgttagcgtttaatccatggaggtggcagg 27527079
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 8867 ttccagcaggaggggaagctgttcgagagctggtacccggacac 8824 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 ||||||||||| | ||||| |||||||||||||||| Sbjct: 6784 gaagatccgttagcgtttaatccatggaggtggcagg 6748
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 120920 ttccagcaggaggggaagctgttcgagagctggtacccggacac 120877 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 ||||||||||| | ||||| |||||||||||||||| Sbjct: 118837 gaagatccgttagcgtttaatccatggaggtggcagg 118801
>emb|AJ459255.1|OSA459255 Oryza sativa (japonica cultivar-group) mRNA for putative cytochrome P450 (CYP87A3 gene) Length = 2185 Score = 63.9 bits (32), Expect = 2e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 355 ttccagcaggagggcaagctgttccggagctggtacccggacac 398 |||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 504 ttccagcaggaggggaagctgttcgagagctggtacccggacac 547 Score = 42.1 bits (21), Expect = 6.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1243 gaagatccgttgacatttaacccatggaggtggcagg 1279 |||||||||||| | || || |||||||||||||||| Sbjct: 1395 gaagatccgttggccttcaatccatggaggtggcagg 1431
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Minus Query: 337 gaggtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 ||||||||||| ||||| || || || ||||| ||| |||||||||||||||| || || Sbjct: 17589333 gaggtgaaccggttcatatttcaacaagagggtaagttgttccggagctggtatccagaa 17589274 Query: 397 acggccaacaacatcttcggcaa 419 || || || |||||||| ||||| Sbjct: 17589273 actgcaaataacatctttggcaa 17589251 Score = 46.1 bits (23), Expect = 0.43 Identities = 65/79 (82%) Strand = Plus / Minus Query: 1091 aggttacgaatgagatatctcgcgtcagtaacgtggcccctggaatattcaggaaaacac 1150 ||||||||||||| || |||| | ||||| || || |||||| | ||||| ||||||| Sbjct: 17587744 aggttacgaatgaaattactcgaattagtaatgttgcacctggagttttcagaaaaacac 17587685 Query: 1151 taacggacgtgcaagtgaa 1169 | || |||||||||||||| Sbjct: 17587684 tgacagacgtgcaagtgaa 17587666 Score = 44.1 bits (22), Expect = 1.7 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1201 atgatcagccccatggctgtccatctgaacccagaattgttcgaagatcc 1250 ||||| ||||||||||| || || || |||||||||||||| || ||||| Sbjct: 17587537 atgattagccccatggcagttcacctaaacccagaattgtttgaggatcc 17587488
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Minus Query: 337 gaggtgaaccgcttcatcttccagcaggagggcaagctgttccggagctggtacccggac 396 ||||||||||| ||||| || || || ||||| ||| |||||||||||||||| || || Sbjct: 117282 gaggtgaaccggttcatatttcaacaagagggtaagttgttccggagctggtatccagaa 117223 Query: 397 acggccaacaacatcttcggcaa 419 || || || |||||||| ||||| Sbjct: 117222 actgcaaataacatctttggcaa 117200 Score = 46.1 bits (23), Expect = 0.43 Identities = 65/79 (82%) Strand = Plus / Minus Query: 1091 aggttacgaatgagatatctcgcgtcagtaacgtggcccctggaatattcaggaaaacac 1150 ||||||||||||| || |||| | ||||| || || |||||| | ||||| ||||||| Sbjct: 115693 aggttacgaatgaaattactcgaattagtaatgttgcacctggagttttcagaaaaacac 115634 Query: 1151 taacggacgtgcaagtgaa 1169 | || |||||||||||||| Sbjct: 115633 tgacagacgtgcaagtgaa 115615 Score = 44.1 bits (22), Expect = 1.7 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1201 atgatcagccccatggctgtccatctgaacccagaattgttcgaagatcc 1250 ||||| ||||||||||| || || || |||||||||||||| || ||||| Sbjct: 115486 atgattagccccatggcagttcacctaaacccagaattgtttgaggatcc 115437
>ref|NM_001048183.1| Homo sapiens phosphatase and actin regulator 4 (PHACTR4), transcript variant 1, mRNA Length = 6225 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ccggtgttcaagacgagcctgg 304 |||||||||||||||||||||| Sbjct: 5546 ccggtgttcaagacgagcctgg 5525
>ref|NM_023923.3| Homo sapiens phosphatase and actin regulator 4 (PHACTR4), transcript variant 2, mRNA Length = 6208 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ccggtgttcaagacgagcctgg 304 |||||||||||||||||||||| Sbjct: 5529 ccggtgttcaagacgagcctgg 5508
>ref|XR_024033.1| PREDICTED: Pan troglodytes hypothetical LOC465240 (LOC465240), mRNA Length = 8708 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 5245 gtccgcagcttctcgtccaggctctt 5220
>gb|AC187574.2| Rhesus macaque BAC clone CH250-33H12 from chromosome unknown, complete sequence Length = 209629 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1618 tactacttccataattggggat 1639 |||||||||||||||||||||| Sbjct: 206419 tactacttccataattggggat 206398
>ref|XM_001108626.1| PREDICTED: Macaca mulatta similar to WNK lysine deficient protein kinase 2 (LOC717275), mRNA Length = 6534 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 4556 gtccgcagcttctcgtccaggctctt 4531
>gb|BC051027.1| Homo sapiens mRNA similar to serologically defined colon cancer antigen 43 (cDNA clone IMAGE:4417441) Length = 8362 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 5126 gtccgcagcttctcgtccaggctctt 5101
>gb|BC021247.2| Homo sapiens phosphatase and actin regulator 4, mRNA (cDNA clone MGC:20618 IMAGE:4577873), complete cds Length = 4045 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ccggtgttcaagacgagcctgg 304 |||||||||||||||||||||| Sbjct: 3415 ccggtgttcaagacgagcctgg 3394
>ref|NM_006648.3| Homo sapiens WNK lysine deficient protein kinase 2 (WNK2), mRNA Length = 6834 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 4673 gtccgcagcttctcgtccaggctctt 4648
>ref|XM_750870.1| Aspergillus fumigatus Af293 glutamyl-tRNA synthetase (Afu2g16280) partial mRNA Length = 1791 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 426 catcgcctcctacgacggctcc 447 |||||||||||||||||||||| Sbjct: 1440 catcgcctcctacgacggctcc 1461
>emb|AL840643.1| Human DNA sequence from clone RP11-442N24 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ13171), complete sequence Length = 21972 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ccggtgttcaagacgagcctgg 304 |||||||||||||||||||||| Sbjct: 19172 ccggtgttcaagacgagcctgg 19151
>emb|AL354991.11| Human DNA sequence from clone RP11-480F4 on chromosome 9 Contains part of the PRKWNK2 gene for protein kinase, lysine deficient 2 (WNK2, NY-CO-43, SDCCAG43, P/OKcl.13), complete sequence Length = 36944 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 16627 gtccgcagcttctcgtccaggctctt 16602
>emb|AJ242724.4|HSA242724 Homo sapiens mRNA for putative mitogen-activated protein kinase kinase kinase (PRKWNK2 gene), splice variant KIAA1760-related Length = 6894 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 4784 gtccgcagcttctcgtccaggctctt 4759
>gb|AC092126.3| Homo sapiens chromosome 16 clone RP11-1114G22, complete sequence Length = 148883 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1010 aagcaatcctgaagaaaagaga 1031 |||||||||||||||||||||| Sbjct: 96952 aagcaatcctgaagaaaagaga 96973
>gb|AC018846.5| Homo sapiens chromosome 16 clone RP11-370P15, complete sequence Length = 175519 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1010 aagcaatcctgaagaaaagaga 1031 |||||||||||||||||||||| Sbjct: 12515 aagcaatcctgaagaaaagaga 12536
>dbj|AK000694.1| Homo sapiens cDNA FLJ20687 fis, clone KAIA302, highly similar to AF039702 Homo sapiens antigen NY-CO-43 mRNA Length = 3255 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 1063 gtccgcagcttctcgtccaggctctt 1038
>dbj|AK024663.1| Homo sapiens cDNA: FLJ21010 fis, clone CAE04212 Length = 1873 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ccggtgttcaagacgagcctgg 304 |||||||||||||||||||||| Sbjct: 1198 ccggtgttcaagacgagcctgg 1177
>dbj|AB051547.2| Homo sapiens mRNA for KIAA1760 protein, partial cds Length = 7792 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 4660 gtccgcagcttctcgtccaggctctt 4635
>gb|AF039702.1|AF039702 Homo sapiens antigen NY-CO-43 mRNA, complete cds Length = 1898 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 460 gtccgcagcttcgcgtccaggctctt 485 |||||||||||| ||||||||||||| Sbjct: 202 gtccgcagcttctcgtccaggctctt 177
>ref|XM_001229746.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_03231) mRNA, complete cds Length = 1167 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 gcggcctcgccgccgtcgtag 109 ||||||||||||||||||||| Sbjct: 728 gcggcctcgccgccgtcgtag 748
>dbj|AK243578.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100082K02, full insert sequence Length = 1346 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tctgcggcctcgccgccgtcg 106 ||||||||||||||||||||| Sbjct: 261 tctgcggcctcgccgccgtcg 281
>ref|NM_001061701.1| Oryza sativa (japonica cultivar-group) Os05g0313500 (Os05g0313500) mRNA, complete cds Length = 1041 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tctgcggcctcgccgccgtcg 106 ||||||||||||||||||||| Sbjct: 287 tctgcggcctcgccgccgtcg 307
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 759 cgtgcagaaggtgctcaagga 779 ||||||||||||||||||||| Sbjct: 1214383 cgtgcagaaggtgctcaagga 1214363
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 759 cgtgcagaaggtgctcaagga 779 ||||||||||||||||||||| Sbjct: 3373823 cgtgcagaaggtgctcaagga 3373843
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctacaagcaaaggctgaaaa 274 ||||||||||||||||||||| Sbjct: 69342 tctacaagcaaaggctgaaaa 69362
>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0024B09, complete sequence Length = 132563 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ttcaggaaaacactaacggacgtgcaagt 1166 ||||||||| ||||||| ||||||||||| Sbjct: 115199 ttcaggaaagcactaacagacgtgcaagt 115227
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tctgcggcctcgccgccgtcg 106 ||||||||||||||||||||| Sbjct: 3605 tctgcggcctcgccgccgtcg 3625
>gb|BC079740.1| Xenopus laevis MGC84165 protein, mRNA (cDNA clone MGC:84165 IMAGE:6952429), complete cds Length = 4194 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 625 aagctgattgggttcagtcct 645 ||||||||||||||||||||| Sbjct: 3354 aagctgattgggttcagtcct 3334
>gb|AC131976.6| Mus musculus chromosome 1, clone RP24-150D10, complete sequence Length = 167470 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1016 tcctgaagaaaagagaagaaggtgc 1040 |||||||||||||||| |||||||| Sbjct: 4606 tcctgaagaaaagagatgaaggtgc 4582
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07, complete sequence Length = 142134 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tctgcggcctcgccgccgtcg 106 ||||||||||||||||||||| Sbjct: 134152 tctgcggcctcgccgccgtcg 134172
>gb|AC118695.10| Mus musculus chromosome 19, clone RP24-62C10, complete sequence Length = 261979 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1025 aaagagaagaaggtgccaagt 1045 ||||||||||||||||||||| Sbjct: 89483 aaagagaagaaggtgccaagt 89463
>dbj|AB183488.1| Oryzias latipes DNA, MHC class I region Length = 540982 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1663 cttctctaccatctcttctct 1683 ||||||||||||||||||||| Sbjct: 156442 cttctctaccatctcttctct 156462
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1138 ttcaggaaaacactaacggacgtgcaagt 1166 ||||||||| ||||||| ||||||||||| Sbjct: 10375588 ttcaggaaagcactaacagacgtgcaagt 10375616
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctacaagcaaaggctgaaaa 274 ||||||||||||||||||||| Sbjct: 11047425 tctacaagcaaaggctgaaaa 11047445
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tctgcggcctcgccgccgtcg 106 ||||||||||||||||||||| Sbjct: 14274819 tctgcggcctcgccgccgtcg 14274839
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctacaagcaaaggctgaaaa 274 ||||||||||||||||||||| Sbjct: 16919911 tctacaagcaaaggctgaaaa 16919931
>emb|BX004991.18| Zebrafish DNA sequence from clone CH211-222F23 in linkage group 9, complete sequence Length = 202138 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 cgcttcatcttccagcaggag 366 ||||||||||||||||||||| Sbjct: 60258 cgcttcatcttccagcaggag 60278
>gb|AC159095.4| Mus musculus chromosome 1, clone RP24-278F22, complete sequence Length = 157935 Score = 42.1 bits (21), Expect = 6.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1016 tcctgaagaaaagagaagaaggtgc 1040 |||||||||||||||| |||||||| Sbjct: 120617 tcctgaagaaaagagatgaaggtgc 120641
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 tcgaggtcaaggacgccgtgg 595 ||||||||||||||||||||| Sbjct: 145621 tcgaggtcaaggacgccgtgg 145601
>emb|AJ488200.1|PVI488200 Uncultured bacterium gene for putative clp protease, clone 11 Length = 2850 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 759 cgtgcagaaggtgctcaagga 779 ||||||||||||||||||||| Sbjct: 1086 cgtgcagaaggtgctcaagga 1106
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence Length = 209970 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1519 gaagattccactgctcttggt 1539 ||||||||||||||||||||| Sbjct: 158282 gaagattccactgctcttggt 158302
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0501G08 Length = 173505 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctacaagcaaaggctgaaaa 274 ||||||||||||||||||||| Sbjct: 131507 tctacaagcaaaggctgaaaa 131527
>emb|AL929518.16| Zebrafish DNA sequence from clone CH211-163F10 in linkage group 2, complete sequence Length = 162473 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 cgcttcatcttccagcaggag 366 ||||||||||||||||||||| Sbjct: 61333 cgcttcatcttccagcaggag 61353
>ref|XM_308772.2| Anopheles gambiae str. PEST ENSANGP00000007670 (ENSANGG00000005781), partial mRNA Length = 2082 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 gcttcatcttccagcaggagg 367 ||||||||||||||||||||| Sbjct: 1532 gcttcatcttccagcaggagg 1512
>ref|XM_308773.2| Anopheles gambiae str. PEST ENSANGP00000024244 (ENSANGG00000005781), partial mRNA Length = 2916 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 gcttcatcttccagcaggagg 367 ||||||||||||||||||||| Sbjct: 1586 gcttcatcttccagcaggagg 1566
>gb|U86087.1|MSU86087 Mycobacterium senegalense superoxide dismutase (SOD) gene, partial cds Length = 388 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 ggtcaaggacgccgtggccaa 599 ||||||||||||||||||||| Sbjct: 37 ggtcaaggacgccgtggccaa 57
>gb|U86085.1|MFU86085 Mycobacterium fortuitum superoxide dismutase (SOD) gene, partial cds Length = 388 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 ggtcaaggacgccgtggccaa 599 ||||||||||||||||||||| Sbjct: 37 ggtcaaggacgccgtggccaa 57
>gb|AC139111.3| Chlorocebus aethiops clone CH252-256L19, complete sequence Length = 184042 Score = 42.1 bits (21), Expect = 6.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1021 aagaaaagagaagaaggtgcc 1041 ||||||||||||||||||||| Sbjct: 90124 aagaaaagagaagaaggtgcc 90144 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 281,265,894 Number of extensions: 14436766 Number of successful extensions: 278720 Number of sequences better than 10.0: 69 Number of HSP's gapped: 278720 Number of HSP's successfully gapped: 115 Length of query: 1763 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1740 Effective length of database: 18,503,978,556 Effective search space: 32196922687440 Effective search space used: 32196922687440 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)