ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf115p19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os04g0663300:Os04g0663300 | 241 | 2e-64 | 2 | AK103509:Os05g0367000 | 241 | 2e-64 | 3 | Os11g0169600:Os11g0169600 | 33 | 0.22 | 4 | AK065706:Os12g0168400 | 31 | 0.85 | 5 | AK108060:Os06g0233200 | 30 | 1.9 | 6 | AK106684:Os02g0762300 | 30 | 1.9 | 7 | Os12g0156000:Os12g0156000 | 29 | 2.5 | 8 | AK067785:Os12g0563400 | 29 | 2.5 | 9 | Os03g0141900:Os03g0141900 | 29 | 3.2 | 10 | AK120746:Os06g0116800 | 29 | 3.2 | 11 | AK071551:Os10g0501000 | 29 | 3.2 | 12 | AK058985:Os06g0116800 | 29 | 3.2 | 13 | AK109030:Os11g0160400 | 28 | 4.2 | 14 | AK107123:Os01g0950700 | 28 | 4.2 | 15 | AK105320:Os01g0273100 | 28 | 4.2 | 16 | Os04g0203500:Os04g0203500 | 28 | 5.5 | 17 | Os01g0710400:Os01g0710400 | 28 | 5.5 | 18 | AK109061:Os05g0165500 | 28 | 5.5 | 19 | AK105045:Os08g0521400 | 28 | 5.5 | 20 | AK101704:Os08g0521400 | 28 | 5.5 | 21 | AK101471:Os04g0414100 | 28 | 5.5 | 22 | AK100432:Os06g0677300 | 28 | 5.5 | 23 | AK070148:Os08g0521400 | 28 | 5.5 | 24 | AK061508:Os04g0414100 | 28 | 5.5 | 25 | AK061316:Os12g0480000 | 28 | 5.5 | 26 | Os02g0585200:Os02g0585200 | 28 | 7.2 | 27 | AK063936:Os06g0694100 | 27 | 9.4 |
|---|
>Os04g0663300:Os04g0663300 | Length = 110 Score = 241 bits (616), Expect = 2e-64 Identities = 109/110 (99%), Positives = 109/110 (99%) Frame = +2 Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 60 Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY FKKR Sbjct: 61 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>AK103509:Os05g0367000 | Length = 110 Score = 241 bits (616), Expect = 2e-64 Identities = 109/110 (99%), Positives = 109/110 (99%) Frame = +2 Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 60 Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY FKKR Sbjct: 61 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>Os11g0169600:Os11g0169600 | Length = 428 Score = 32.7 bits (73), Expect = 0.22 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = +3 Query: 18 IPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSPALP 197 +PPA +S G A + +K R+G+ V+ +V + P TP+SS + SP P Sbjct: 125 LPPALPSSLSGFEAVLLAVYSSEAKNRQGKPVLVQVPDLSVPSLYHTPLSSPSSKSPRRP 184
>AK065706:Os12g0168400 | Length = 419 Score = 30.8 bits (68), Expect = 0.85 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 10/79 (12%) Frame = +2 Query: 173 CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYG----------SFQGRCVI 322 CRK C+ C+G S V P T+ + C C S + C Sbjct: 191 CRKTIAYEADVFCDTCNG------SGVPPGTVPQTCKACRGAGVIFMQRGIMSIETTCSR 244 Query: 323 CGGVGISDAYYCKECTQQE 379 CGG G +CK C ++ Sbjct: 245 CGGSGKIVKNFCKTCKGEQ 263
>AK108060:Os06g0233200 | Length = 436 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +3 Query: 57 ASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSPALP 197 AS AGS A +R RGELV+ R P + A PALP Sbjct: 23 ASSAGSSAAAPRRLRGELVV----------RDAIPYAGVAPPPPALP 59
>AK106684:Os02g0762300 | Length = 363 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 176 RKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQ 307 R+ P A RLC +C + + RP TL ++C EC Y F+ Sbjct: 9 RQPPARAGSRLCTRCGERKA---ALKRPKTLEQICRECFYVVFE 49
>Os12g0156000:Os12g0156000 | Length = 165 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +3 Query: 33 STSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSP 188 ++S+ GL A+ +G++ K+R G +R S +TP + A S+P Sbjct: 35 ASSAPGLLAALPDDEGSKKKKRAGPAAVRSASRPVPETAPLTPTAGAARSAP 86
>AK067785:Os12g0563400 | Length = 625 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Frame = +2 Query: 191 IAIGRLCEKCDGKCVIC----DSYVRPC------TLVRVCDECNYGSFQGRCVICGGVGI 340 I++G L E G C++C D Y C LV VC C + C +C G Sbjct: 283 ISVGSLKENILGTCLLCGSSFDDYSPRCRCSHCRMLVLVCSTCQDSTKDYVCELCQKNG- 341 Query: 341 SDAYYCKECTQQEKDRDGC 397 K+C Q R GC Sbjct: 342 ------KQCC-QTSPRQGC 353
>Os03g0141900:Os03g0141900 | Length = 623 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +2 Query: 53 RRVARGKPRSQEQAPPRRARHSEG*Q---HPTAMAKHHPDLIMCRKQPGIAIGRLCEKC 220 R VAR +PR + P R R S Q P + + R P A R C +C Sbjct: 488 RAVARARPRYRPVPPARACRPSRAVQTTAPPAVFPRARAEWPTARSPPSSASARACRQC 546
>AK120746:Os06g0116800 | Length = 442 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/75 (26%), Positives = 24/75 (32%), Gaps = 10/75 (13%) Frame = +2 Query: 173 CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSF----------QGRCVI 322 C K C+ C G + V P T C C F Q C Sbjct: 211 CTKTINFQTAVTCDTCKG------AGVPPGTKPETCLACRGSGFIFMQTGPFRMQSTCTQ 264 Query: 323 CGGVGISDAYYCKEC 367 CGG G + +CK C Sbjct: 265 CGGSGKTVKEFCKSC 279
>AK071551:Os10g0501000 | Length = 451 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = +3 Query: 3 PSPEYIPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPI 164 PSP PP R + A S RR+ + + R+V++ P ++P+ Sbjct: 20 PSPPPPPPGKPPPPRSVAAEERASPSPPPPRRKKDSLFRRVAAAADPRLPLSPV 73
>AK058985:Os06g0116800 | Length = 442 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/75 (26%), Positives = 24/75 (32%), Gaps = 10/75 (13%) Frame = +2 Query: 173 CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSF----------QGRCVI 322 C K C+ C G + V P T C C F Q C Sbjct: 211 CTKTINFQTAVTCDTCKG------AGVPPGTKPETCLACRGSGFIFMQTGPFRMQSTCTQ 264 Query: 323 CGGVGISDAYYCKEC 367 CGG G + +CK C Sbjct: 265 CGGSGKTVKEFCKSC 279
>AK109030:Os11g0160400 | Length = 316 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 6/58 (10%) Frame = +2 Query: 2 AVARIHSARLVDVV------SGSRRVARGKPRSQEQAPPRRARHSEG*QHPTAMAKHH 157 AVA +H+ + + SGS V + K + +E+APP + H + +KHH Sbjct: 74 AVAPVHAVAVGEAPPPLKEESGSGHVKKSKHKDEERAPPPKKHHEKA----PPKSKHH 127
>AK107123:Os01g0950700 | Length = 434 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 9 PEYIPPASSTSSRGLGASPAGSQGARSKRRRG 104 P Y+ SS+ +RG G A + GA +R RG Sbjct: 38 PNYMRATSSSDARGGGREAAAATGAPPRRERG 69
>AK105320:Os01g0273100 | Length = 191 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 21 PPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSS 131 PPA++ S+ A+ +G Q AR G+ V+R++ S Sbjct: 18 PPATAASTAAGTAAASGKQQARGAGAEGQSVVRRLQS 54
>Os04g0203500:Os04g0203500 | Length = 707 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +3 Query: 21 PPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSI------RQPWRSITPISSCAGS 182 PP+ S S R A S+ AR +RRR +I ++ P R + CA Sbjct: 448 PPSPSPSPRSAARCRAASRPARRRRRRRVAIITTPHAVAIAVASSSPPRRLPVTVGCAAP 507 Query: 183 SP 188 SP Sbjct: 508 SP 509
>Os01g0710400:Os01g0710400 | Length = 161 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +3 Query: 21 PPASSTSSRGLGASPAGSQGARSKRRRG 104 PPAS TS R A G +G+R R RG Sbjct: 87 PPASPTSRRWRRAGVGGREGSRRPRLRG 114
>AK109061:Os05g0165500 | Length = 227 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = +3 Query: 3 PSPEYIPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGS 182 P P Y A G +S + G + RG L + R+PWR +P S+ + S Sbjct: 76 PPPSYYASAGKKGGGGGASSGSRRSGWSAGGARGVLG----AMFRRPWRRTSPCSTSSSS 131 Query: 183 S 185 S Sbjct: 132 S 132
>AK105045:Os08g0521400 | Length = 346 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 54 GASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSP 188 G+ P G++G + K G K ++I P+R+ SC P Sbjct: 228 GSKPDGARGPKPKMPEGSWKCEKCNNINYPFRTKCNRPSCEAEKP 272
>AK101704:Os08g0521400 | Length = 347 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 54 GASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSP 188 G+ P G++G + K G K ++I P+R+ SC P Sbjct: 229 GSKPDGARGPKPKMPEGSWKCEKCNNINYPFRTKCNRPSCEAEKP 273
>AK101471:Os04g0414100 | Length = 550 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = +3 Query: 3 PSPEYIPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQP--WRSITPISSCA 176 P+P PP S+ + GL +GS ++ S R+P W + SS + Sbjct: 152 PAPPAPPPKPSSGNNGLRRMGSGSSNN-----------ARIGSSRRPVAWPPVAVRSSAS 200 Query: 177 GSSPALP 197 GS P+ P Sbjct: 201 GSRPSSP 207
>AK100432:Os06g0677300 | Length = 530 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = -1 Query: 638 SLKTIHQIQLLQIRSSPRMYSPINQVPNHSNTFGKPALGIINSSASMPQQHK 483 S K H + + I +S + SP NQ+ N T + I S S+P K Sbjct: 182 SAKRTHSLPVTPIATSDKTSSPANQINNLPTTDDQDVQARIRRSLSVPGNRK 233
>AK070148:Os08g0521400 | Length = 289 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +3 Query: 54 GASPAGSQGARSKRRRGELVIRKVSSIRQPWRSITPISSCAGSSP 188 G+ P G++G + K G K ++I P+R+ SC P Sbjct: 229 GSKPDGARGPKPKMPEGSWKCEKCNNINYPFRTKCNRPSCEAEKP 273
>AK061508:Os04g0414100 | Length = 545 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = +3 Query: 3 PSPEYIPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQP--WRSITPISSCA 176 P+P PP S+ + GL +GS ++ S R+P W + SS + Sbjct: 147 PAPPAPPPKPSSGNNGLRRMGSGSSNN-----------ARIGSSRRPVAWPPVAVRSSAS 195 Query: 177 GSSPALP 197 GS P+ P Sbjct: 196 GSRPSSP 202
>AK061316:Os12g0480000 | Length = 334 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 533 PALGIINSSASMPQQHKIMPTSS 465 P G +NS S+PQQ K+ PT+S Sbjct: 109 PNNGSLNSPLSLPQQQKLNPTTS 131
>Os02g0585200:Os02g0585200 | Length = 133 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +2 Query: 20 SARLVDVVSGSRRVARGKPRSQEQAPPRRARHSEG*QHPTAMAKHHP 160 SA LV+V S++ + +E+ H G HP + HHP Sbjct: 65 SAELVEVSDASKKKEEEAKKKEEKEELVYYHHGYGYYHPGGVYHHHP 111
>AK063936:Os06g0694100 | Length = 419 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 10/53 (18%) Frame = +3 Query: 15 YIPP-ASSTSSRGLGAS---------PAGSQGARSKRRRGELVIRKVSSIRQP 143 Y PP SSTS++ L +S PAG GARSK G L+ + P Sbjct: 31 YAPPEGSSTSTKSLLSSLLPSSHPQAPAGGGGARSKEAAGLLLFCAAARAASP 83 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,186,570 Number of extensions: 420454 Number of successful extensions: 1483 Number of sequences better than 10.0: 27 Number of HSP's gapped: 1480 Number of HSP's successfully gapped: 27 Length of query: 222 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 125 Effective length of database: 11,515,878 Effective search space: 1439484750 Effective search space used: 1439484750 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
