>O80873:PHF5_ARATH Uncharacterized protein At1g07170/At2g30000 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 110
 Score =  241 bits (615), Expect = 2e-63
 Identities = 108/110 (98%), Positives = 109/110 (99%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVI
Sbjct: 1   MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVI 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472
           CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY FKKR
Sbjct: 61  CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110

>P83871:PHF5A_RAT PHD finger-like domain-containing protein 5A - Rattus norvegicus|
           (Rat)
          Length = 110

 Score =  228 bits (580), Expect = 2e-59
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVI
Sbjct: 1   MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472
           CGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKY FKKR
Sbjct: 61  CGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110

>P83870:PHF5A_MOUSE PHD finger-like domain-containing protein 5A - Mus musculus (Mouse)|
          Length = 110

 Score =  228 bits (580), Expect = 2e-59
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVI
Sbjct: 1   MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472
           CGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKY FKKR
Sbjct: 61  CGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110

>Q7RTV0:PHF5A_HUMAN PHD finger-like domain-containing protein 5A - Homo sapiens (Human)|
          Length = 110

 Score =  228 bits (580), Expect = 2e-59
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           MAKHHPDLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVI
Sbjct: 1   MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKKR 472
           CGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKY FKKR
Sbjct: 61  CGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110

>Q9VMC8:PHF5_DROME Uncharacterized protein CG9548 - Drosophila melanogaster (Fruit|
           fly)
          Length = 111

 Score =  221 bits (562), Expect = 2e-57
 Identities = 97/109 (88%), Positives = 103/109 (94%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           MAKHHPDLI CRKQPG+AIGRLCEK DGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVI
Sbjct: 1   MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYVFKK 469
           CGG G+SDAYYCK CT QEKDRDGCPKIVNLGS+KTDLFYERKKY FK+
Sbjct: 61  CGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQ 109

>Q9UTB8:INI1_SCHPO Pre-mRNA-splicing factor ini1 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 117

 Score =  181 bits (460), Expect = 2e-45
 Identities = 72/105 (68%), Positives = 91/105 (86%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           M+KHHPDL++CR+QPGI +G+LCE+CD KC ICDS+VRP TLVR+CDEC +GS Q RC+I
Sbjct: 1   MSKHHPDLVLCRRQPGITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCII 60

Query: 323 CGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY 457
           CG  G+SD YYC ECT+ E DRDGCP+++NLGS++TD FYERKK+
Sbjct: 61  CGAPGVSDCYYCSECTRMEYDRDGCPRVINLGSSRTDWFYERKKF 105

>Q06835:RDS3_YEAST Pre-mRNA-splicing factor RDS3 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 107

 Score =  140 bits (354), Expect = 3e-33
 Identities = 62/107 (57%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = +2

Query: 143 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVI 322
           M++H  DLIMC KQPG+  G LCEKCDGKC ICDSYVRP   VRVC+ C++G     C+I
Sbjct: 1   MSRHQFDLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCII 60

Query: 323 CG-GVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYV 460
           C   VG++DA+YC EC +  KD+DGCP+I+NLGS + D  +E+KK V
Sbjct: 61  CNLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKKKV 107

>Q68FP1:GELS_RAT Gelsolin precursor - Rattus norvegicus (Rat)|
          Length = 780

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 41  VSGSRRVARGKPRSQEQAPPRRARHSEG*QHPTAMAKHHPDLIMCRKQPGIAIGRLCEKC 220
           +S S      + R+QE+AP  R   +     P+ M   HP+ +   K+PG+ I R+ EK 
Sbjct: 20  LSPSHAATASRGRAQERAPQSRVSETR----PSTMVVEHPEFLKAGKEPGLQIWRV-EKF 74

Query: 221 D 223
           D
Sbjct: 75  D 75

>P13020:GELS_MOUSE Gelsolin precursor - Mus musculus (Mouse)|
          Length = 780

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 41  VSGSRRVARGKPRSQEQAPPRRARHSEG*QHPTAMAKHHPDLIMCRKQPGIAIGRLCEKC 220
           +S S      + R+QE+AP  R   +     P+ M   HP+ +   K+PG+ I R+ EK 
Sbjct: 20  LSPSHAATTSRGRAQERAPQSRVSEAR----PSTMVVEHPEFLKAGKEPGLQIWRV-EKF 74

Query: 221 D 223
           D
Sbjct: 75  D 75

>P51559:BLI4_CAEEL Endoprotease bli-4 precursor - Caenorhabditis elegans|
          Length = 943

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
 Frame = +2

Query: 224 GKCVICDSYVRPCTL--VRVCDECNYGSFQGR---CVICGGVGISDAYYCKECTQQE 379
           GKC +CDS    CT      C++C+ G  +G    C  C   G + ++ C++C++ +
Sbjct: 805 GKCDLCDSSCETCTAPGPMSCEKCSKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPD 861

>Q08970:MMT2_YEAST Mitochondrial metal transporter 2, mitochondrial precursor -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 449

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -2

Query: 568 IRYQTIAIHSANLLLVSSTQVPACHSSTK*CLPLLENILLTLVEEVRLGAPQV 410
           +R  TI     NL   ++ +VP  HS  +  +  LEN + T+ E++R+  P V
Sbjct: 388 VRDLTILASGPNLRATTTLEVPVLHSGQEVGIRFLENAISTIREDLRMKVPNV 440

>A2SU54:DP2L_METLZ DNA polymerase II large subunit - Methanocorpusculum labreanum|
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 1141

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 272 RVCDECNYGSFQGRCVICGGVGISDAYYCKECTQ-QEKDRDGCPKI-VNLGSAKTDLFYE 445
           R C +C   +F+ RC  C G      Y C  C Q  E+ ++ CPK   NL  +K  +   
Sbjct: 642 RRCPKCGTVTFKSRCADC-GTHTDAVYRCPHCNQLGEEGQESCPKCGANLVCSKESIVSL 700

Query: 446 RKKY 457
            ++Y
Sbjct: 701 GQEY 704

>P53094:MDS3_YEAST Negative regulator of sporulation MDS3 - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 1487

 Score = 33.1 bits (74), Expect = 0.96
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = -1

Query: 632 KTIHQIQLLQIRSSPRMYSPINQVPNHSNTFGKPALGIINSSASMPQQHKIMPTS 468
           K+ HQ  LL  ++    YSP  Q  +H +TFG P + I N +  +P  HKI  +S
Sbjct: 423 KSHHQTILLGTKTDD-YYSPSVQRFDHLSTFGLPLVNIFNKTIQLP-HHKISASS 475

>Q5S007:LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinase 2 - Homo|
           sapiens (Human)
          Length = 2527

 Score = 33.1 bits (74), Expect = 0.96
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +2

Query: 206 LCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKD 385
           LC KC  K V  D Y++   L R CD+ N  S    C++  G   + A        Q  +
Sbjct: 694 LCCKCFAK-VAMDDYLKNVMLERACDQNN--SIMVECLLLLGADANQAKEGSSLICQVCE 750

Query: 386 RDGCPKIV----NLGSAKTDL 436
           ++  PK+V    N GS + D+
Sbjct: 751 KESSPKLVELLLNSGSREQDV 771

>P11046:LAMB1_DROME Laminin subunit beta-1 precursor - Drosophila melanogaster (Fruit|
           fly)
          Length = 1790

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = +2

Query: 155 HPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSF----QG-RCV 319
           H    MC   P  ++ ++CE   G C       +P  + R CD+C  G++    +G +  
Sbjct: 785 HDGASMCNCNPTGSLSKVCESNGGYC-----QCKPNVVGRQCDQCAPGTYGFGPEGCKAC 839

Query: 320 ICGGVGISDAY 352
            C  +G  D Y
Sbjct: 840 DCNSIGSKDKY 850

>Q9HMX8:DP2L_HALSA DNA polymerase II large subunit - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 1370

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +2

Query: 272 RVCDECNYGSFQGRCVICGGVGISDAYYCKEC----TQQEKDRDGCP 400
           RVC  C+  +++ RC  CG       Y C++C    T  E  R  CP
Sbjct: 675 RVCPSCDEHTYESRCPDCGD-WTDPHYECRDCGAVATPDESGRVECP 720

>P92127:VS41_GIALA Variant-specific surface protein VSP4A1 precursor - Giardia lamblia|
           (Giardia intestinalis)
          Length = 687

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
 Frame = +2

Query: 176 RKQPGIAIGRLCEKC-DGK--------CVIC-DSYVRPCTLVRVCDEC--NYGSFQGRCV 319
           R   G+A+   C  C DGK        CV C D+  + CT+  VC+EC   +    G+CV
Sbjct: 586 RADGGMAVAT-CTACEDGKKPGKSGTGCVACPDANCKSCTMDDVCEECADGFSLDNGKCV 644

Query: 320 ICG 328
             G
Sbjct: 645 SSG 647

>P21849:TSA4_GIALA Major surface-labeled trophozoite antigen 417 precursor - Giardia|
           lamblia (Giardia intestinalis)
          Length = 713

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
 Frame = +2

Query: 212 EKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDA----YYCKECTQQE 379
           E  DGKC  C   +   T    C+  NY    G+CV     G S      +   +CTQ  
Sbjct: 22  EADDGKCKTCGVTIGQDTWCSECNGANYAPVNGQCVDVNAEGPSKTLCPQHSAGKCTQCG 81

Query: 380 KD----RDGC 397
            +    +DGC
Sbjct: 82  GNSFMYKDGC 91

>Q03185:TS11_GIALA Major surface trophozoite antigen 11 precursor - Giardia lamblia|
           (Giardia intestinalis)
          Length = 667

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 17/82 (20%)
 Frame = +2

Query: 200 GRLCEKCDGKCVICDS-YVRPCT--------------LVRVCDE-CNYGSFQGRCVICGG 331
           G  C  C   C  C +     CT                  C E C  G   G C  CG 
Sbjct: 367 GDACSPCHESCKTCSAGTASDCTECPTGKALKYGNDGTKGTCGEGCTTGQGSGACKTCG- 425

Query: 332 VGISDAYYCKEC-TQQEKDRDG 394
           + I  A YC EC TQ E  ++G
Sbjct: 426 LTIDGASYCSECDTQNEYPQNG 447

>P10220:TEGU_HHV11 Large tegument protein - Human herpesvirus 1 (strain 17) (HHV-1)|
            (Human herpes simplex virus 1)
          Length = 3164

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 9    PEYIPPASSTSSRGLGASPAGSQGARSKRRRGELVIRKVSSIRQPWR------SITPISS 170
            P+   P    SSR   AS +GS+  R +R R      + S+  Q WR      ++ P++ 
Sbjct: 2659 PDATAPRPPASSRASAASSSGSRARRHRRARSLARATQASATTQGWRPPALPDTVAPVTD 2718

Query: 171  CAGSSPALP 197
             A   PA P
Sbjct: 2719 FA-RPPAPP 2726

>Q6DIV5:RAMP_XENTR Inactive serine protease RAMP precursor - Xenopus tropicalis|
           (Western clawed frog) (Silurana tropicalis)
          Length = 722

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 173 CRKQPGIAIGRLCEKCDGKC---VICDSYVRPCTLVRVCDECNYGSFQGRCVICGGV 334
           C   PG +I   C+ C+       + D Y++       C EC  G + G C+ CG V
Sbjct: 81  CLIHPGCSIFENCKSCNNGSWGGTLDDFYIKGS----YCSECRMGWYGGDCMRCGEV 133

>P21769:ODFP_RAT Outer dense fiber protein - Rattus norvegicus (Rat)|
          Length = 245

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = +2

Query: 209 CEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKEC 367
           C K +  C  C S   PC     C  C      G C  CG  G  D   C  C
Sbjct: 181 CVKIESPCYPCTSPCNPCNPCSPCSPCGPCGPCGPCGPCGPCGPCDP--CNPC 231

>Q9HYL3:NOSR_PSEAE Regulatory protein nosR - Pseudomonas aeruginosa|
          Length = 715

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +2

Query: 254 RPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVN 412
           RPC L     EC   +        G +  ++ +YC +C     D+D CP +VN
Sbjct: 648 RPCQLC--ARECEIQAIHPD----GRIEANECHYCLDCQMTYHDQDKCPPLVN 694

>Q38813:DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 408

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 17/65 (26%), Positives = 21/65 (32%)
 Frame = +2

Query: 173 CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAY 352
           C K+        C+ CDG     D+ +  C   R         F   C  C G G     
Sbjct: 174 CTKRLSFDAYVFCDSCDGLGHPSDAAMSICPTCRGVGRVTIPPFTASCQTCKGTGHIIKE 233

Query: 353 YCKEC 367
           YC  C
Sbjct: 234 YCMSC 238

>Q9NJ15:PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5 precursor -|
            Branchiostoma californiensis (California lancelet)
            (Amphioxus)
          Length = 1696

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
 Frame = +2

Query: 209  CEKCDG----KCVICDSYVR----PCTLVRVCDECNYGSFQGRC----VICGGVGISDAY 352
            C  C G    +C+ C  ++         +  C++  YG+ +G+C    +IC     S A 
Sbjct: 831  CASCSGSRDDQCLTCSGHLELDEDTHRCITSCEDGEYGTEEGKCEDCNIICKKCNGSQAD 890

Query: 353  YCKEC 367
             C EC
Sbjct: 891  QCLEC 895

>Q9HRY3:DNAJ_HALSA Chaperone protein dnaJ - Halobacterium salinarium (Halobacterium|
           halobium)
          Length = 391

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +2

Query: 203 RLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEK 382
           R C +CDG+ V+      P   V+   EC+          CGG G   +  C  C  Q +
Sbjct: 180 RTCPQCDGQGVVTQVRQTPLGRVQQRQECSR---------CGGEGELHSETCSTCGGQGQ 230

Query: 383 DRDGCPKIVNL 415
            R+     V++
Sbjct: 231 TRERATLTVDI 241


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 106,305,483
Number of extensions: 2325048
Number of successful extensions: 6283
Number of sequences better than 10.0: 26
Number of HSP's gapped: 6264
Number of HSP's successfully gapped: 26
Length of query: 222
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 113
Effective length of database: 70,788,284
Effective search space: 7999076092
Effective search space used: 7999076092
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)