ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf115p17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050634.1| Oryza sativa (japonica cultivar-group) Os01g0722100 (Os01g0722100) mRNA, complete cds Length = 1509 Score = 638 bits (322), Expect = e-179 Identities = 576/660 (87%), Gaps = 3/660 (0%) Strand = Plus / Plus Query: 292 gaaaacaatgtaattgggaactatgccgtggttggtgttaagtgccaagatctcaaatat 351 ||||||||||| ||||| || | || || |||||||||||||||||||||||||| ||| Sbjct: 357 gaaaacaatgtcattggacaccacgctgtagttggtgttaagtgccaagatctcaagtat 416 Query: 352 aagccaggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgc 411 ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 417 aagtcaggagatgaatgctttctacagattggtaacaataatgagatcagagagtactgt 476 Query: 412 tctattcaccgatcttctaaatcttgtgactgcacggttattggtgacaataatctcata 471 |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 477 tctattcatcgctcttctaaatcttgtgactgcacggttattggtgacaataatcttata 536 Query: 472 atggggtcctgccatatagcacatgactgcaagattggtagcaataacatcttcgctaat 531 ||||| || ||||||||||||||||| |||| |||||| | ||||||||| || ||||| Sbjct: 537 atgggttcatgccatatagcacatgattgcaggattggcaacaataacatatttgctaac 596 Query: 532 aatactctatttggtggccatgttattgttgaagactacactcatactgctggggctgtc 591 ||||||||||||| |||||||||| |||||||||| | ||| |||||||| |||||||| Sbjct: 597 aatactctatttgctggccatgttgttgttgaagattgcacccatactgcaggggctgtt 656 Query: 592 gttgtccatcaattttgtcacattggatcattctcatttctaggcgggggctctgtggtt 651 |||||||||||||||||||| ||||| ||||| ||||||||||| || ||||||||| | Sbjct: 657 gttgtccatcaattttgtcatattgggtcattttcatttctaggtggaggctctgtgatc 716 Query: 652 gcacaagatgttccaagatacacgatggttgcaggtgatagagcagagcttcgtggtctg 711 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 717 gcacaagatgtgccaagatacatgatggttgcaggtgatagagcagagcttcgtgggctg 776 Query: 712 aatcttgaaggtctcaggcgcaacggtttctcggaccaagaggtacggagcctaaggaaa 771 |||||||||||||| | |||||| |||||||| |||||||||||||||| | |||||| Sbjct: 777 aatcttgaaggtcttaagcgcaatggtttctcagaccaagaggtacggatgttgaggaaa 836 Query: 772 gcatattggaaagtatttatgccagccagtagttcccaaagcaactttgaagaccgactc 831 || ||| |||||||||||||| | | || | || || | |||||| || |||| Sbjct: 837 gcttatcaacaagtatttatgccatctattaatagtcagagtagctttgatgagagactt 896 Query: 832 gctgaactggaacgtgaaattgagctattggaatctccctctgtatcctgtatggtggaa 891 |||||||||||||| ||||||||| ||| ||| ||| |||||||| |||||||||| Sbjct: 897 gctgaactggaacgggaaattgagttatcagaaactc---atgtatcctatatggtggaa 953 Query: 892 tctattcgcacctcatttgaccaaggacgtcgtggcatttgcaaattcagaagttggaac 951 |||||||||| || |||| ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 954 tctattcgcatgtcctttggccaaggacgtcgtggaatttgcaaatttagaagttggaac 1013 Score = 220 bits (111), Expect = 1e-53 Identities = 177/199 (88%) Strand = Plus / Plus Query: 63 gagggatcggcgagggacgcgtccacgagcttcatccatcccgccgccgtcgtccacccc 122 |||||| |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| Sbjct: 108 gagggagcggcgagggaggcggccacgagcttcgtccaccccgccgccgtcgtccacccc 167 Query: 123 gacgccgccatcggccagggtgtctcaataggcccattttgcaccgtgggggcttcagcg 182 ||||||| | |||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 168 gacgccgtcgtcggacagggtgtctcgataggcccattttgcaccgtgggagcttcagcg 227 Query: 183 aggattggtgatgcatgtcagttacacacagggagtcatgtcaccggacataccgagcta 242 ||||||||||| || |||||||||||| | ||||| ||||||| ||| ||||||||||| Sbjct: 228 aggattggtgacgcttgtcagttacacgctgggagccatgtcatgggagataccgagcta 287 Query: 243 ggagaaggatgcgttgttc 261 || || |||| ||||||| Sbjct: 288 ggggagagatgtgttgttc 306
>dbj|AK066657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069K22, full insert sequence Length = 1510 Score = 638 bits (322), Expect = e-179 Identities = 576/660 (87%), Gaps = 3/660 (0%) Strand = Plus / Plus Query: 292 gaaaacaatgtaattgggaactatgccgtggttggtgttaagtgccaagatctcaaatat 351 ||||||||||| ||||| || | || || |||||||||||||||||||||||||| ||| Sbjct: 358 gaaaacaatgtcattggacaccacgctgtagttggtgttaagtgccaagatctcaagtat 417 Query: 352 aagccaggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgc 411 ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 418 aagtcaggagatgaatgctttctacagattggtaacaataatgagatcagagagtactgt 477 Query: 412 tctattcaccgatcttctaaatcttgtgactgcacggttattggtgacaataatctcata 471 |||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 478 tctattcatcgctcttctaaatcttgtgactgcacggttattggtgacaataatcttata 537 Query: 472 atggggtcctgccatatagcacatgactgcaagattggtagcaataacatcttcgctaat 531 ||||| || ||||||||||||||||| |||| |||||| | ||||||||| || ||||| Sbjct: 538 atgggttcatgccatatagcacatgattgcaggattggcaacaataacatatttgctaac 597 Query: 532 aatactctatttggtggccatgttattgttgaagactacactcatactgctggggctgtc 591 ||||||||||||| |||||||||| |||||||||| | ||| |||||||| |||||||| Sbjct: 598 aatactctatttgctggccatgttgttgttgaagattgcacccatactgcaggggctgtt 657 Query: 592 gttgtccatcaattttgtcacattggatcattctcatttctaggcgggggctctgtggtt 651 |||||||||||||||||||| ||||| ||||| ||||||||||| || ||||||||| | Sbjct: 658 gttgtccatcaattttgtcatattgggtcattttcatttctaggtggaggctctgtgatc 717 Query: 652 gcacaagatgttccaagatacacgatggttgcaggtgatagagcagagcttcgtggtctg 711 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 718 gcacaagatgtgccaagatacatgatggttgcaggtgatagagcagagcttcgtgggctg 777 Query: 712 aatcttgaaggtctcaggcgcaacggtttctcggaccaagaggtacggagcctaaggaaa 771 |||||||||||||| | |||||| |||||||| |||||||||||||||| | |||||| Sbjct: 778 aatcttgaaggtcttaagcgcaatggtttctcagaccaagaggtacggatgttgaggaaa 837 Query: 772 gcatattggaaagtatttatgccagccagtagttcccaaagcaactttgaagaccgactc 831 || ||| |||||||||||||| | | || | || || | |||||| || |||| Sbjct: 838 gcttatcaacaagtatttatgccatctattaatagtcagagtagctttgatgagagactt 897 Query: 832 gctgaactggaacgtgaaattgagctattggaatctccctctgtatcctgtatggtggaa 891 |||||||||||||| ||||||||| ||| ||| ||| |||||||| |||||||||| Sbjct: 898 gctgaactggaacgggaaattgagttatcagaaactc---atgtatcctatatggtggaa 954 Query: 892 tctattcgcacctcatttgaccaaggacgtcgtggcatttgcaaattcagaagttggaac 951 |||||||||| || |||| ||||||||||||||| ||||||||||| |||||||||||| Sbjct: 955 tctattcgcatgtcctttggccaaggacgtcgtggaatttgcaaatttagaagttggaac 1014 Score = 220 bits (111), Expect = 1e-53 Identities = 177/199 (88%) Strand = Plus / Plus Query: 63 gagggatcggcgagggacgcgtccacgagcttcatccatcccgccgccgtcgtccacccc 122 |||||| |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| Sbjct: 109 gagggagcggcgagggaggcggccacgagcttcgtccaccccgccgccgtcgtccacccc 168 Query: 123 gacgccgccatcggccagggtgtctcaataggcccattttgcaccgtgggggcttcagcg 182 ||||||| | |||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 169 gacgccgtcgtcggacagggtgtctcgataggcccattttgcaccgtgggagcttcagcg 228 Query: 183 aggattggtgatgcatgtcagttacacacagggagtcatgtcaccggacataccgagcta 242 ||||||||||| || |||||||||||| | ||||| ||||||| ||| ||||||||||| Sbjct: 229 aggattggtgacgcttgtcagttacacgctgggagccatgtcatgggagataccgagcta 288 Query: 243 ggagaaggatgcgttgttc 261 || || |||| ||||||| Sbjct: 289 ggggagagatgtgttgttc 307
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 151 bits (76), Expect = 8e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 652 gcacaagatgttccaagatacacgatggttgcaggtgatagagcagagcttcgtggtctg 711 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 30098813 gcacaagatgtgccaagatacatgatggttgcaggtgatagagcagagcttcgtgggctg 30098872 Query: 712 aatcttgaaggtctcaggcgcaacggtttctcggaccaagaggt 755 |||||||||||||| | |||||| |||||||| ||||||||||| Sbjct: 30098873 aatcttgaaggtcttaagcgcaatggtttctcagaccaagaggt 30098916 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Plus Query: 356 caggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgctcta 415 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 30097696 caggagatgaatgctttctacagattggtaacaataatgagatcagagagtactgttcta 30097755 Query: 416 ttcaccgatcttctaaatcttgtgactgcacggt 449 |||| || |||||||||||||||||||||||||| Sbjct: 30097756 ttcatcgctcttctaaatcttgtgactgcacggt 30097789 Score = 141 bits (71), Expect = 8e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 447 ggttattggtgacaataatctcataatggggtcctgccatatagcacatgactgcaagat 506 ||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 30097864 ggttattggtgacaataatcttataatgggttcatgccatatagcacatgattgcaggat 30097923 Query: 507 tggtagcaataacatcttcgctaataatactctatttggtggccatgttattgttgaag 565 ||| | ||||||||| || ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 30097924 tggcaacaataacatatttgctaacaatactctatttgctggccatgttgttgttgaag 30097982 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 139 agggtgtctcaataggcccattttgcaccgtgggggcttcagcgaggattggtgatgcat 198 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 30096808 agggtgtctcgataggcccattttgcaccgtgggagcttcagcgaggattggtgacgctt 30096867 Query: 199 gtcagttacacacagggagtcatgtcaccggacataccgagctaggagaaggatgcgttg 258 ||||||||||| | ||||| ||||||| ||| ||||||||||||| || |||| |||| Sbjct: 30096868 gtcagttacacgctgggagccatgtcatgggagataccgagctaggggagagatgtgttg 30096927 Query: 259 ttc 261 ||| Sbjct: 30096928 ttc 30096930 Score = 101 bits (51), Expect = 7e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 873 tgtatcctgtatggtggaatctattcgcacctcatttgaccaaggacgtcgtggcatttg 932 |||||||| |||||||||||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 30099608 tgtatcctatatggtggaatctattcgcatgtcctttggccaaggacgtcgtggaatttg 30099667 Query: 933 caaattcagaagttggaac 951 |||||| |||||||||||| Sbjct: 30099668 caaatttagaagttggaac 30099686 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Plus Query: 574 catactgctggggctgtcgttgtccatcaattttgtcacattggatcattctcatttcta 633 |||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 30098075 catactgcaggggctgttgttgtccatcaattttgtcatattgggtcattttcatttcta 30098134 Query: 634 ggcgggggctctgtggt 650 || || ||||||||||| Sbjct: 30098135 ggtggaggctctgtggt 30098151 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 63 gagggatcggcgagggacgcgtccacgagcttcatccatcccgccgccgtcgtccacccc 122 |||||| |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| Sbjct: 30096452 gagggagcggcgagggaggcggccacgagcttcgtccaccccgccgccgtcgtccacccc 30096511 Query: 123 gacgccg 129 ||||||| Sbjct: 30096512 gacgccg 30096518 Score = 61.9 bits (31), Expect = 6e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 292 gaaaacaatgtaattgggaactatgccgtggttggtgttaagtgccaagatctcaaatat 351 ||||||||||| ||||| || | || || |||||||||||||||||||||||||| ||| Sbjct: 30097451 gaaaacaatgtcattggacaccacgctgtagttggtgttaagtgccaagatctcaagtat 30097510 Query: 352 aag 354 ||| Sbjct: 30097511 aag 30097513
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 151 bits (76), Expect = 8e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 652 gcacaagatgttccaagatacacgatggttgcaggtgatagagcagagcttcgtggtctg 711 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 3635 gcacaagatgtgccaagatacatgatggttgcaggtgatagagcagagcttcgtgggctg 3694 Query: 712 aatcttgaaggtctcaggcgcaacggtttctcggaccaagaggt 755 |||||||||||||| | |||||| |||||||| ||||||||||| Sbjct: 3695 aatcttgaaggtcttaagcgcaatggtttctcagaccaagaggt 3738 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Plus Query: 356 caggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgctcta 415 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 2518 caggagatgaatgctttctacagattggtaacaataatgagatcagagagtactgttcta 2577 Query: 416 ttcaccgatcttctaaatcttgtgactgcacggt 449 |||| || |||||||||||||||||||||||||| Sbjct: 2578 ttcatcgctcttctaaatcttgtgactgcacggt 2611 Score = 141 bits (71), Expect = 8e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 447 ggttattggtgacaataatctcataatggggtcctgccatatagcacatgactgcaagat 506 ||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 2686 ggttattggtgacaataatcttataatgggttcatgccatatagcacatgattgcaggat 2745 Query: 507 tggtagcaataacatcttcgctaataatactctatttggtggccatgttattgttgaag 565 ||| | ||||||||| || ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 2746 tggcaacaataacatatttgctaacaatactctatttgctggccatgttgttgttgaag 2804 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 139 agggtgtctcaataggcccattttgcaccgtgggggcttcagcgaggattggtgatgcat 198 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 1630 agggtgtctcgataggcccattttgcaccgtgggagcttcagcgaggattggtgacgctt 1689 Query: 199 gtcagttacacacagggagtcatgtcaccggacataccgagctaggagaaggatgcgttg 258 ||||||||||| | ||||| ||||||| ||| ||||||||||||| || |||| |||| Sbjct: 1690 gtcagttacacgctgggagccatgtcatgggagataccgagctaggggagagatgtgttg 1749 Query: 259 ttc 261 ||| Sbjct: 1750 ttc 1752 Score = 101 bits (51), Expect = 7e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 873 tgtatcctgtatggtggaatctattcgcacctcatttgaccaaggacgtcgtggcatttg 932 |||||||| |||||||||||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 4430 tgtatcctatatggtggaatctattcgcatgtcctttggccaaggacgtcgtggaatttg 4489 Query: 933 caaattcagaagttggaac 951 |||||| |||||||||||| Sbjct: 4490 caaatttagaagttggaac 4508 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Plus Query: 574 catactgctggggctgtcgttgtccatcaattttgtcacattggatcattctcatttcta 633 |||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 2897 catactgcaggggctgttgttgtccatcaattttgtcatattgggtcattttcatttcta 2956 Query: 634 ggcgggggctctgtggt 650 || || ||||||||||| Sbjct: 2957 ggtggaggctctgtggt 2973 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 63 gagggatcggcgagggacgcgtccacgagcttcatccatcccgccgccgtcgtccacccc 122 |||||| |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| Sbjct: 1274 gagggagcggcgagggaggcggccacgagcttcgtccaccccgccgccgtcgtccacccc 1333 Query: 123 gacgccg 129 ||||||| Sbjct: 1334 gacgccg 1340 Score = 61.9 bits (31), Expect = 6e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 292 gaaaacaatgtaattgggaactatgccgtggttggtgttaagtgccaagatctcaaatat 351 ||||||||||| ||||| || | || || |||||||||||||||||||||||||| ||| Sbjct: 2273 gaaaacaatgtcattggacaccacgctgtagttggtgttaagtgccaagatctcaagtat 2332 Query: 352 aag 354 ||| Sbjct: 2333 aag 2335
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 151 bits (76), Expect = 8e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 652 gcacaagatgttccaagatacacgatggttgcaggtgatagagcagagcttcgtggtctg 711 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 94803 gcacaagatgtgccaagatacatgatggttgcaggtgatagagcagagcttcgtgggctg 94862 Query: 712 aatcttgaaggtctcaggcgcaacggtttctcggaccaagaggt 755 |||||||||||||| | |||||| |||||||| ||||||||||| Sbjct: 94863 aatcttgaaggtcttaagcgcaatggtttctcagaccaagaggt 94906 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Plus Query: 356 caggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgctcta 415 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 93686 caggagatgaatgctttctacagattggtaacaataatgagatcagagagtactgttcta 93745 Query: 416 ttcaccgatcttctaaatcttgtgactgcacggt 449 |||| || |||||||||||||||||||||||||| Sbjct: 93746 ttcatcgctcttctaaatcttgtgactgcacggt 93779 Score = 141 bits (71), Expect = 8e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 447 ggttattggtgacaataatctcataatggggtcctgccatatagcacatgactgcaagat 506 ||||||||||||||||||||| |||||||| || ||||||||||||||||| |||| ||| Sbjct: 93854 ggttattggtgacaataatcttataatgggttcatgccatatagcacatgattgcaggat 93913 Query: 507 tggtagcaataacatcttcgctaataatactctatttggtggccatgttattgttgaag 565 ||| | ||||||||| || ||||| ||||||||||||| |||||||||| ||||||||| Sbjct: 93914 tggcaacaataacatatttgctaacaatactctatttgctggccatgttgttgttgaag 93972 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 139 agggtgtctcaataggcccattttgcaccgtgggggcttcagcgaggattggtgatgcat 198 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 92798 agggtgtctcgataggcccattttgcaccgtgggagcttcagcgaggattggtgacgctt 92857 Query: 199 gtcagttacacacagggagtcatgtcaccggacataccgagctaggagaaggatgcgttg 258 ||||||||||| | ||||| ||||||| ||| ||||||||||||| || |||| |||| Sbjct: 92858 gtcagttacacgctgggagccatgtcatgggagataccgagctaggggagagatgtgttg 92917 Query: 259 ttc 261 ||| Sbjct: 92918 ttc 92920 Score = 101 bits (51), Expect = 7e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 873 tgtatcctgtatggtggaatctattcgcacctcatttgaccaaggacgtcgtggcatttg 932 |||||||| |||||||||||||||||||| || |||| ||||||||||||||| ||||| Sbjct: 95598 tgtatcctatatggtggaatctattcgcatgtcctttggccaaggacgtcgtggaatttg 95657 Query: 933 caaattcagaagttggaac 951 |||||| |||||||||||| Sbjct: 95658 caaatttagaagttggaac 95676 Score = 97.6 bits (49), Expect = 1e-16 Identities = 70/77 (90%) Strand = Plus / Plus Query: 574 catactgctggggctgtcgttgtccatcaattttgtcacattggatcattctcatttcta 633 |||||||| |||||||| |||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 94065 catactgcaggggctgttgttgtccatcaattttgtcatattgggtcattttcatttcta 94124 Query: 634 ggcgggggctctgtggt 650 || || ||||||||||| Sbjct: 94125 ggtggaggctctgtggt 94141 Score = 93.7 bits (47), Expect = 2e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 63 gagggatcggcgagggacgcgtccacgagcttcatccatcccgccgccgtcgtccacccc 122 |||||| |||||||||| ||| ||||||||||| |||| ||||||||||||||||||||| Sbjct: 92442 gagggagcggcgagggaggcggccacgagcttcgtccaccccgccgccgtcgtccacccc 92501 Query: 123 gacgccg 129 ||||||| Sbjct: 92502 gacgccg 92508 Score = 61.9 bits (31), Expect = 6e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 292 gaaaacaatgtaattgggaactatgccgtggttggtgttaagtgccaagatctcaaatat 351 ||||||||||| ||||| || | || || |||||||||||||||||||||||||| ||| Sbjct: 93441 gaaaacaatgtcattggacaccacgctgtagttggtgttaagtgccaagatctcaagtat 93500 Query: 352 aag 354 ||| Sbjct: 93501 aag 93503
>ref|NM_119099.2| Arabidopsis thaliana unknown protein (AT4G29540) mRNA, complete cds Length = 1036 Score = 85.7 bits (43), Expect = 4e-13 Identities = 157/195 (80%) Strand = Plus / Plus Query: 316 gccgtggttggtgttaagtgccaagatctcaaatataagccaggagatgaatgctttcta 375 ||||||||||||||||| || ||||| | || || |||| ||||||||||||||||| Sbjct: 361 gccgtggttggtgttaaatgtcaagacttgaagtacaagcatggagatgaatgctttctt 420 Query: 376 cacattggtaacaacaatgagatcagagagtactgctctattcaccgatcttctaaatct 435 |||||||||||||||||| ||||| |||| |||||| |||||| | || || || | Sbjct: 421 tgcattggtaacaacaatgaaatcagggagttctgctcgattcacaggtcatcaaagccc 480 Query: 436 tgtgactgcacggttattggtgacaataatctcataatggggtcctgccatatagcacat 495 |||| ||||||||||||||||| ||||| || ||||| || || ||||| || ||| Sbjct: 481 agtgataaaacggttattggtgacaacaatctaatcatgggttcttgtcatatcgcccat 540 Query: 496 gactgcaagattggt 510 || || ||||||||| Sbjct: 541 gattgtaagattggt 555 Score = 46.1 bits (23), Expect = 0.34 Identities = 68/83 (81%) Strand = Plus / Plus Query: 634 ggcgggggctctgtggttgcacaagatgttccaagatacacgatggttgcaggtgataga 693 ||||| || |||||||| ||||||||||||||| |||| |||||| || || || ||| Sbjct: 679 ggcggtggttctgtggtctcacaagatgttccaaagtacatgatggtggctggagaaaga 738 Query: 694 gcagagcttcgtggtctgaatct 716 || || ||||| ||| ||||||| Sbjct: 739 gccgaacttcgcggtttgaatct 761
>ref|NM_001036672.1| Arabidopsis thaliana unknown protein (AT4G29540) mRNA, complete cds Length = 1225 Score = 85.7 bits (43), Expect = 4e-13 Identities = 157/195 (80%) Strand = Plus / Plus Query: 316 gccgtggttggtgttaagtgccaagatctcaaatataagccaggagatgaatgctttcta 375 ||||||||||||||||| || ||||| | || || |||| ||||||||||||||||| Sbjct: 407 gccgtggttggtgttaaatgtcaagacttgaagtacaagcatggagatgaatgctttctt 466 Query: 376 cacattggtaacaacaatgagatcagagagtactgctctattcaccgatcttctaaatct 435 |||||||||||||||||| ||||| |||| |||||| |||||| | || || || | Sbjct: 467 tgcattggtaacaacaatgaaatcagggagttctgctcgattcacaggtcatcaaagccc 526 Query: 436 tgtgactgcacggttattggtgacaataatctcataatggggtcctgccatatagcacat 495 |||| ||||||||||||||||| ||||| || ||||| || || ||||| || ||| Sbjct: 527 agtgataaaacggttattggtgacaacaatctaatcatgggttcttgtcatatcgcccat 586 Query: 496 gactgcaagattggt 510 || || ||||||||| Sbjct: 587 gattgtaagattggt 601 Score = 46.1 bits (23), Expect = 0.34 Identities = 68/83 (81%) Strand = Plus / Plus Query: 634 ggcgggggctctgtggttgcacaagatgttccaagatacacgatggttgcaggtgataga 693 ||||| || |||||||| ||||||||||||||| |||| |||||| || || || ||| Sbjct: 725 ggcggtggttctgtggtctcacaagatgttccaaagtacatgatggtggctggagaaaga 784 Query: 694 gcagagcttcgtggtctgaatct 716 || || ||||| ||| ||||||| Sbjct: 785 gccgaacttcgcggtttgaatct 807
>gb|AY142528.1| Arabidopsis thaliana putative UDP-N-acetylglucosamine O-acyltransferase (At4g29540) mRNA, complete cds Length = 1036 Score = 85.7 bits (43), Expect = 4e-13 Identities = 157/195 (80%) Strand = Plus / Plus Query: 316 gccgtggttggtgttaagtgccaagatctcaaatataagccaggagatgaatgctttcta 375 ||||||||||||||||| || ||||| | || || |||| ||||||||||||||||| Sbjct: 361 gccgtggttggtgttaaatgtcaagacttgaagtacaagcatggagatgaatgctttctt 420 Query: 376 cacattggtaacaacaatgagatcagagagtactgctctattcaccgatcttctaaatct 435 |||||||||||||||||| ||||| |||| |||||| |||||| | || || || | Sbjct: 421 tgcattggtaacaacaatgaaatcagggagttctgctcgattcacaggtcatcaaagccc 480 Query: 436 tgtgactgcacggttattggtgacaataatctcataatggggtcctgccatatagcacat 495 |||| ||||||||||||||||| ||||| || ||||| || || ||||| || ||| Sbjct: 481 agtgataaaacggttattggtgacaacaatctaatcatgggttcttgtcatatcgcccat 540 Query: 496 gactgcaagattggt 510 || || ||||||||| Sbjct: 541 gattgtaagattggt 555 Score = 46.1 bits (23), Expect = 0.34 Identities = 68/83 (81%) Strand = Plus / Plus Query: 634 ggcgggggctctgtggttgcacaagatgttccaagatacacgatggttgcaggtgataga 693 ||||| || |||||||| ||||||||||||||| |||| |||||| || || || ||| Sbjct: 679 ggcggtggttctgtggtctcacaagatgttccaaagtacatgatggtggctggagaaaga 738 Query: 694 gcagagcttcgtggtctgaatct 716 || || ||||| ||| ||||||| Sbjct: 739 gccgaacttcgcggtttgaatct 761
>dbj|AK175463.1| Arabidopsis thaliana mRNA for UDP-N-acetylglucosamine O-acyltransferase - like protein, complete cds, clone: RAFL21-89-G19 Length = 1225 Score = 81.8 bits (41), Expect = 6e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 316 gccgtggttggtgttaagtgccaagatctcaaatataagccaggagatgaatgctttcta 375 ||||||||||||||||| || ||||| | || || |||| ||||||||||||||||| Sbjct: 407 gccgtggttggtgttaaatgtcaagacttgaagtacaagcatggagatgaatgctttctt 466 Query: 376 cacattggtaacaacaatgagatcagagagtactgctctattcac 420 |||||||||||||||||| ||||| |||| |||||| |||||| Sbjct: 467 tgcattggtaacaacaatgaaatcagggagttctgctcgattcac 511 Score = 46.1 bits (23), Expect = 0.34 Identities = 68/83 (81%) Strand = Plus / Plus Query: 634 ggcgggggctctgtggttgcacaagatgttccaagatacacgatggttgcaggtgataga 693 ||||| || |||||||| ||||||||||||||| |||| |||||| || || || ||| Sbjct: 725 ggcggtggttctgtggtctcacaagatgttccaaagtacatgatggtggctggagaaaga 784 Query: 694 gcagagcttcgtggtctgaatct 716 || || ||||| ||| ||||||| Sbjct: 785 gccgaacttcgcggtttgaatct 807
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 358 ggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgctctatt 417 ||||||||||||||||| |||||||||||||||||| ||||| |||| |||||| ||| Sbjct: 33386 ggagatgaatgctttctttgcattggtaacaacaatgaaatcagggagttctgctcgatt 33445 Query: 418 cac 420 ||| Sbjct: 33446 cac 33448 Score = 48.1 bits (24), Expect = 0.085 Identities = 54/64 (84%) Strand = Plus / Plus Query: 447 ggttattggtgacaataatctcataatggggtcctgccatatagcacatgactgcaagat 506 ||||||||||||||| ||||| || ||||| || || ||||| || ||||| || ||||| Sbjct: 33557 ggttattggtgacaacaatctaatcatgggttcttgtcatatcgcccatgattgtaagat 33616 Query: 507 tggt 510 |||| Sbjct: 33617 tggt 33620
>emb|AL079344.1|ATT16L4 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L4 (ESSA project) Length = 88011 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 358 ggagatgaatgctttctacacattggtaacaacaatgagatcagagagtactgctctatt 417 ||||||||||||||||| |||||||||||||||||| ||||| |||| |||||| ||| Sbjct: 8571 ggagatgaatgctttctttgcattggtaacaacaatgaaatcagggagttctgctcgatt 8630 Query: 418 cac 420 ||| Sbjct: 8631 cac 8633 Score = 48.1 bits (24), Expect = 0.085 Identities = 54/64 (84%) Strand = Plus / Plus Query: 447 ggttattggtgacaataatctcataatggggtcctgccatatagcacatgactgcaagat 506 ||||||||||||||| ||||| || ||||| || || ||||| || ||||| || ||||| Sbjct: 8742 ggttattggtgacaacaatctaatcatgggttcttgtcatatcgcccatgattgtaagat 8801 Query: 507 tggt 510 |||| Sbjct: 8802 tggt 8805
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 50.1 bits (25), Expect = 0.022 Identities = 28/29 (96%) Strand = Plus / Plus Query: 103 ccgccgccgtcgtccaccccgacgccgcc 131 ||||||||| ||||||||||||||||||| Sbjct: 81815 ccgccgccgccgtccaccccgacgccgcc 81843
>gb|CP000388.1| Pseudoalteromonas atlantica T6c, complete genome Length = 5187005 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 820 gaagaccgactcgctgaactggaacgt 846 ||||||||| ||||||||||||||||| Sbjct: 3563937 gaagaccgaatcgctgaactggaacgt 3563911
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 11469128 ccgccgccgtcgtccacctcgacgccg 11469102
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 24980039 ccgccgccgtcgtccacctcgacgccg 24980013
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 23262 ccgccgccgtcgtccacctcgacgccg 23236
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 32372 ccgccgccgtcgtccacctcgacgccg 32346
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 74594 ccgccgccgtcgtccacctcgacgccg 74568
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccg 129 |||||||||||||||||| |||||||| Sbjct: 83117 ccgccgccgtcgtccacctcgacgccg 83091
>ref|NW_001091927.1| Theileria annulata strain Ankara clone C9 Length = 1979170 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 928 atttgcaaattcagaagttggaacat 953 ||||| |||||||||||||||||||| Sbjct: 1943541 atttggaaattcagaagttggaacat 1943516
>dbj|AK077379.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430407H18 product:unclassifiable, full insert sequence Length = 428 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 acaacaatgagatcagagagta 407 |||||||||||||||||||||| Sbjct: 350 acaacaatgagatcagagagta 371
>dbj|AK042464.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630094D22 product:unclassifiable, full insert sequence Length = 1562 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 acaacaatgagatcagagagta 407 |||||||||||||||||||||| Sbjct: 613 acaacaatgagatcagagagta 634
>dbj|AK076602.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921531D08 product:weakly similar to CG7394 PROTEIN [Drosophila melanogaster], full insert sequence Length = 2505 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 acaacaatgagatcagagagta 407 |||||||||||||||||||||| Sbjct: 1377 acaacaatgagatcagagagta 1398
>ref|XM_947601.1| Theileria annulata strain Ankara hypothetical protein (TA11390) partial mRNA Length = 1593 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 928 atttgcaaattcagaagttggaacat 953 ||||| |||||||||||||||||||| Sbjct: 549 atttggaaattcagaagttggaacat 524
>gb|AC068294.26|AC068294 Mus musculus 3 BAC RP23-418O21 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 201750 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 386 acaacaatgagatcagagagta 407 |||||||||||||||||||||| Sbjct: 67591 acaacaatgagatcagagagta 67570
>ref|NM_001074262.1| Oryza sativa (japonica cultivar-group) Os11g0300600 (Os11g0300600) mRNA, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 ccgccgccgtcgtccaccccgacgccgcc 131 |||||| |||||||||||||| ||||||| Sbjct: 910 ccgccgtcgtcgtccaccccgccgccgcc 938
>gb|DQ914285.1| Streptomyces hygroscopicus strain 17997 geldanamycin biosynthesis gene cluster, partial sequence Length = 28356 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 5751 tccaccccgacgccgtcatcggcca 5775
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 caccccgacgccgccatcggccagg 141 ||||||||||||||||||| ||||| Sbjct: 3945362 caccccgacgccgccatcgcccagg 3945386
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 geldanamycin biosynthesis gene cluster, partial sequence Length = 75920 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 20162 tccaccccgacgccgtcatcggcca 20186 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 26372 tccaccccgacgccgtcatcggcca 26396 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 32573 tccaccccgacgccgtcatcggcca 32597 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 37538 tccaccccgacgccgtcatcggcca 37562 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 42866 tccaccccgacgccgtcatcggcca 42890 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 54130 tccaccccgacgccgtcatcggcca 54154
>gb|AC171130.2| Helobdella robusta clone CH306-1A12, complete sequence Length = 86276 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 940 agaagttggaacatctcataa 960 ||||||||||||||||||||| Sbjct: 66016 agaagttggaacatctcataa 66036
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 103 ccgccgccgtcgtccaccccgacgccgcc 131 |||||| |||||||||||||| ||||||| Sbjct: 65209 ccgccgtcgtcgtccaccccgccgccgcc 65181
>ref|NM_139584.1| Drosophila melanogaster CG14982-RB (CG14982), mRNA Length = 3321 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 caccccgacgccgccatcggccagg 141 ||||||||||||||||||| ||||| Sbjct: 2283 caccccgacgccgccatcgcccagg 2307
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 39045 tccaccccgacgccgtcatcggcca 39069 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 55482 tccaccccgacgccgtcatcggcca 55506
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ttcatccatcccgccgccgtc 113 ||||||||||||||||||||| Sbjct: 5185893 ttcatccatcccgccgccgtc 5185873
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 ccgccgccgtcgtccaccccgacgccgcc 131 |||||| |||||||||||||| ||||||| Sbjct: 11112401 ccgccgtcgtcgtccaccccgccgccgcc 11112429
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1196 gtactagttttcttgcctctt 1216 ||||||||||||||||||||| Sbjct: 14394281 gtactagttttcttgcctctt 14394261
>gb|AY075166.1| Drosophila melanogaster AT05602 full length cDNA Length = 3334 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 caccccgacgccgccatcggccagg 141 ||||||||||||||||||| ||||| Sbjct: 2282 caccccgacgccgccatcgcccagg 2306
>emb|AL139395.7| Human DNA sequence from clone RP11-130N24 on chromosome Xq13.3-21.2 Contains the 3' end of gene KIAA2022, complete sequence Length = 146610 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 atgagatcagagagtactgct 412 ||||||||||||||||||||| Sbjct: 87902 atgagatcagagagtactgct 87922
>gb|AC092809.2| Homo sapiens chromosome 1 clone RP11-365O16, complete sequence Length = 197621 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1124 gccaatccagatgaaacttgg 1144 ||||||||||||||||||||| Sbjct: 8253 gccaatccagatgaaacttgg 8273 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1124 gccaatccagatgaaacttgg 1144 ||||||||||||||||||||| Sbjct: 25838 gccaatccagatgaaacttgg 25818
>gb|AC023680.3| Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186218 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 caccccgacgccgccatcggccagg 141 ||||||||||||||||||| ||||| Sbjct: 32753 caccccgacgccgccatcgcccagg 32777
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1196 gtactagttttcttgcctctt 1216 ||||||||||||||||||||| Sbjct: 148535 gtactagttttcttgcctctt 148515
>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence Length = 168591 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 aagccaggagatgaatgcttt 372 ||||||||||||||||||||| Sbjct: 3926 aagccaggagatgaatgcttt 3946
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis gene cluster, partial sequence Length = 69644 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 12378 tccaccccgacgccgtcatcggcca 12402 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 18591 tccaccccgacgccgtcatcggcca 18615 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 24792 tccaccccgacgccgtcatcggcca 24816 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 29757 tccaccccgacgccgtcatcggcca 29781 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 35085 tccaccccgacgccgtcatcggcca 35109 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 tccaccccgacgccgccatcggcca 139 ||||||||||||||| ||||||||| Sbjct: 46358 tccaccccgacgccgtcatcggcca 46382
>dbj|AK060497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G05, full insert sequence Length = 1719 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 103 ccgccgccgtcgtccaccccgacgccgcc 131 |||||| |||||||||||||| ||||||| Sbjct: 910 ccgccgtcgtcgtccaccccgccgccgcc 938 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 236,290,926 Number of extensions: 12192767 Number of successful extensions: 212472 Number of sequences better than 10.0: 44 Number of HSP's gapped: 212463 Number of HSP's successfully gapped: 93 Length of query: 1385 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1362 Effective length of database: 18,503,978,556 Effective search space: 25202418793272 Effective search space used: 25202418793272 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
