ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf115o13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111309:Os11g0488600 196 2e-50

>AK111309:Os11g0488600 |
          Length = 191
 Score =  196 bits (498), Expect = 2e-50
 Identities = 115/214 (53%), Positives = 131/214 (61%), Gaps = 15/214 (7%)
 Frame = +3

Query: 90  SMMTREQLLHLFSRFSFLTALPGLPPHPIPRXXXXXXXXXXXXXXXXXXXVFCRRVSEFK 269
           SMMTR QLLHLFSRFSFLT+LP                                   E K
Sbjct: 12  SMMTRPQLLHLFSRFSFLTSLP-----------------------------------EVK 36

Query: 270 DRIADAVSEKXXXXXXXXXXXXX---------------ILREMGIDPSFGIACLGKVNVV 404
            RIADAV +K                            ILREMGIDPSFGI CLGKVNV+
Sbjct: 37  ARIADAVRDKQSSLGVRLEQMSLARYEAVAVTTEIQEEILREMGIDPSFGIGCLGKVNVM 96

Query: 405 YENDMDLMIKFYQFVAKEEMAIDEAELEPLEFAEKMHTXXXXXXXXXXMLVQIRKYSPES 584
           YE+DM+LM+KFYQFVAKEEMAIDEAEL+P+EFAEK+H           ML+Q+RKY+PES
Sbjct: 97  YEDDMELMVKFYQFVAKEEMAIDEAELDPIEFAEKIHAQHKLQEQQLKMLIQMRKYNPES 156

Query: 585 QSVILETLRKQLEHADFDPSASVLTPEQIKGIVQ 686
           QSVILETLRKQLE A+FD  AS+LTPEQI+ IV+
Sbjct: 157 QSVILETLRKQLESANFDTDASILTPEQIQEIVE 190


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,142,610
Number of extensions: 494070
Number of successful extensions: 1201
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1200
Number of HSP's successfully gapped: 2
Length of query: 329
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,355,714
Effective search space: 2589102792
Effective search space used: 2589102792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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