| Clone Name | FLbaf110j10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073806.1| Oryza sativa (japonica cultivar-group) Os12g0615400 (Os12g0615400) mRNA, complete cds Length = 1366 Score = 383 bits (193), Expect = e-102 Identities = 663/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 327 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 386 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 387 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 446 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 447 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 506 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 507 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 566 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 567 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 626 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 627 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcagcatcgag 686 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 687 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 746 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 747 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 806 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 807 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 866 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 867 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 926 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 927 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 986 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 987 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1043 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1044 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1103 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1104 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1142
>dbj|AK105795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A02, full insert sequence Length = 1301 Score = 383 bits (193), Expect = e-102 Identities = 663/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 314 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 373 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 374 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 433 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 434 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 493 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 494 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 553 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 554 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 613 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 614 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcagcatcgag 673 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 674 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 733 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 734 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 793 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 794 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 853 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 854 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 913 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 914 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 973 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 974 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1030 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1031 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1090 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1091 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1129
>dbj|AK104295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F10, full insert sequence Length = 1311 Score = 383 bits (193), Expect = e-102 Identities = 663/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 324 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 383 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 384 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 443 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 444 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 503 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 504 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 563 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 564 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 623 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 624 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcagcatcgag 683 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 684 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 743 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 744 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 803 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 804 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 863 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 864 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 923 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 924 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 983 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 984 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1040 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1041 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1100 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1101 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1139
>dbj|AK072988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150A08, full insert sequence Length = 1359 Score = 383 bits (193), Expect = e-102 Identities = 663/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 322 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 381 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 382 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 441 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 442 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 501 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 502 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 561 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 562 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 621 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 622 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcagcatcgag 681 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 682 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 741 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 742 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 801 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 802 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 861 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 862 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 921 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 922 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 981 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 982 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1038 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1039 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1098 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1099 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1137
>emb|CT830324.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN009N07, full insert sequence Length = 1326 Score = 375 bits (189), Expect = e-100 Identities = 662/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 339 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 398 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 399 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 458 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 459 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 518 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 519 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 578 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 579 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 638 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||| Sbjct: 639 gaggacctccccttccccaccgacaccttcgaccgctatgtctccgccggcagcatcgag 698 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 699 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 758 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 759 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 818 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 819 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 878 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 879 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 938 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 939 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 998 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 999 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1055 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1056 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1115 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1116 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1154
>dbj|AK103998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C05, full insert sequence Length = 1366 Score = 375 bits (189), Expect = e-100 Identities = 662/819 (80%), Gaps = 3/819 (0%) Strand = Plus / Plus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 327 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 386 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 387 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 446 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 447 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 506 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 507 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 566 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 567 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 626 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcagcattgag 422 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 627 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcagcatcgag 686 Query: 423 tattggcctgatccacaacgggggatcagggaggcctacagggtcctgaccgccgacggc 482 |||||||| ||||| || || || |||| ||| || |||||||| ||| | || Sbjct: 687 tattggcccgatccgcagcgaggaatcaaggaagcttacagggttttgaggcttggtgga 746 Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||| ||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 747 gtggtttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 806 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 807 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 866 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 867 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 926 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 927 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 986 Query: 723 cttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtcttcttt 782 |||||||| |||||||||||||| ||||| || |||||| || || | || |||| Sbjct: 987 cttggtccaaaggttgaggatgtcagcaa---acctgtgaatcctatcaccttcctcttc 1043 Query: 783 cggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttacatgtgg 842 || |||||||| ||||||||||| || |||||| | | || |||||||| ||||||||| Sbjct: 1044 cgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctacatgtgg 1103 Query: 843 atcaaggacaagattgtgccccaaggcaggcccatctaa 881 || |||||| ||||||||||| |||||| ||| |||||| Sbjct: 1104 ataaaggaccagattgtgcccaaaggcatgccgatctaa 1142
>gb|AY104466.1| Zea mays PCO114350 mRNA sequence Length = 1005 Score = 228 bits (115), Expect = 4e-56 Identities = 235/275 (85%) Strand = Plus / Plus Query: 197 cctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctcggcgtcgtccggca 256 ||||| ||| ||||| |||||||| ||||| |||||||||||||||||| ||||| ||| Sbjct: 100 cctcacggtcgtcgacgtcggcggcggcacggggttcaccacgctcggcatcgtcaagca 159 Query: 257 cgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaactcgacaaggccag 316 ||| | || |||||||| |||||| |||||||||| |||||||| |||||||||||| | Sbjct: 160 cgtcaacccggagaacgtcacgctgctcgaccagtccccgcaccagctcgacaaggcccg 219 Query: 317 aaagaagaaggccctaaggggcatcaagatcatgaagggtgacgccgaggaccttccctt 376 ||||| ||||||| | ||| ||| |||||| |||| |||||||||||||| || || Sbjct: 220 gcagaaggaggccctcaagggggtcaccatcatggagggcgacgccgaggacctcccgtt 279 Query: 377 ccccaccgacaccttcgaccgatacgtctccgctggcagcattgagtattggcctgatcc 436 |||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||| || || Sbjct: 280 ccccaccgactccttcgaccgatacatctccgccggcagcatcgagtactggccagaccc 339 Query: 437 acaacgggggatcagggaggcctacagggtcctga 471 ||| |||||||||| ||| |||||||||||||||| Sbjct: 340 acagcgggggatcaaggaagcctacagggtcctga 374 Score = 143 bits (72), Expect = 2e-30 Identities = 296/370 (80%), Gaps = 3/370 (0%) Strand = Plus / Plus Query: 510 ccgacattttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaa 569 ||||| || ||||| || ||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 413 ccgaccttctggctgtcccgcttcttcgccgacatgtggatgctcttccccaaggaggaa 472 Query: 570 gagtacatggaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcggg 629 |||||||| || |||||| ||| ||| ||||||| ||| ||| |||| | ||||| || Sbjct: 473 gagtacatcgagtggttcaagaaggctgggtttagggatgtcaagctgaagaggattgga 532 Query: 630 cccaagtggtaccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcacgggc 689 || ||||||||||| |||| ||| ||||||||||| |||| || || | ||||| ||| Sbjct: 533 ccgaagtggtaccgcggtgtccgaaggcatggcctcatcatgggctgctccgtcacaggc 592 Query: 690 atcaagacacaaagtggagactcccccttgcagcttggtccgaaggttgaggatgtgagc 749 |||||| | | | || ||||| |||||| |||||||||| |||| |||||||| ||| Sbjct: 593 gtcaagagagagcgcggtgactctcccttggagcttggtcccaaggcggaggatgtcagc 652 Query: 750 aagccacatgtgaaccccgtcttcgtcttctttcggttcctcattggaacaatatgcgcc 809 |||||| ||||| || || | || |||| || |||||| | ||||| ||||| || Sbjct: 653 aagcca---gtgaatccgatcaccttcctcttccgcttcctcgtaggaacgatatgtgct 709 Query: 810 acatactttttcctagtgcctatttacatgtggatcaaggacaagattgtgccccaaggc 869 | |||| | | || |||||||||||||||||||| |||||| |||| ||||| ||||| Sbjct: 710 gcctactatgttctggtgcctatttacatgtggataaaggaccagatcgtgccaaaaggc 769 Query: 870 aggcccatct 879 | ||| |||| Sbjct: 770 atgccaatct 779
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 208 bits (105), Expect = 4e-50 Identities = 291/353 (82%) Strand = Plus / Minus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 26136773 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 26136714 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 26136713 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 26136654 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 26136653 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 26136594 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 26136593 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 26136534 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 26136533 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 26136474 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcag 415 |||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 26136473 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcag 26136421 Score = 111 bits (56), Expect = 6e-21 Identities = 194/240 (80%) Strand = Plus / Minus Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 26136140 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 26136081 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 26136080 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 26136021 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 26136020 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 26135961 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 26135960 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 26135901 Score = 91.7 bits (46), Expect = 6e-15 Identities = 135/164 (82%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 718 tgcagcttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtct 777 ||||||||||||| |||||||||||||| ||||| || |||||| || || | || Sbjct: 26135120 tgcagcttggtccaaaggttgaggatgtcagcaaacc---tgtgaatcctatcaccttcc 26135064 Query: 778 tctttcggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttaca 837 |||| || |||||||| ||||||||||| || |||||| | | || |||||||| |||| Sbjct: 26135063 tcttccgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctaca 26135004 Query: 838 tgtggatcaaggacaagattgtgccccaaggcaggcccatctaa 881 ||||||| |||||| ||||||||||| |||||| ||| |||||| Sbjct: 26135003 tgtggataaaggaccagattgtgcccaaaggcatgccgatctaa 26134960
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 208 bits (105), Expect = 4e-50 Identities = 291/353 (82%) Strand = Plus / Minus Query: 63 atccagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccat 122 ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 27011 atccagcacaagaaggaggcgttctggttctaccgcttcctctccatcgtctacgaccac 26952 Query: 123 gtcttcaaccccggccagtacactgaggacatgcgcgacatctccctggagcatgcccgc 182 ||| ||||||| ||||| | || ||||||||||| ||| | |||| |||| ||| | Sbjct: 26951 gtcatcaacccgggccactggacggaggacatgcgggacgacgccctcgagcccgccgac 26892 Query: 183 ctccatagccgggccctcaaggtggtcgatgtcggcggtggcactgggttcaccacgctc 242 ||| | ||||| |||| ||| ||||| |||||||| || || ||||||||||||||| Sbjct: 26891 ctctacagccgcaagctcagggtcgtcgacgtcggcggcgggacggggttcaccacgctc 26832 Query: 243 ggcgtcgtccggcacgttgatcccgagaacgtgacgctgatcgaccagtcgccgcaccaa 302 || ||||| || ||| || || |||||||| |||||| |||||||||| |||||||| Sbjct: 26831 gggatcgtcaagcgcgtcgacccggagaacgtcacgctgctcgaccagtccccgcaccag 26772 Query: 303 ctcgacaaggccagaaagaagaaggccctaaggggcatcaagatcatgaagggtgacgcc 362 ||||| |||||| | ||||| ||||||| | |||| ||| |||||| |||| |||||| Sbjct: 26771 ctcgagaaggcccgggagaaggaggccctcaagggcgtcaccatcatggagggcgacgcc 26712 Query: 363 gaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctggcag 415 |||||||| |||||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 26711 gaggacctccccttccccaccgacaccttcgaccgctacgtctccgccggcag 26659 Score = 111 bits (56), Expect = 6e-21 Identities = 194/240 (80%) Strand = Plus / Minus Query: 483 gtggcttgtatgataggccccgtccgtccgacattttggctatctcgcttcttcgctgac 542 |||||||| ||||| |||||||| | || || || ||||| |||||||| ||||||||| Sbjct: 26378 gtggcttgcatgattggccccgtgcacccaaccttctggctgtctcgctttttcgctgac 26319 Query: 543 atgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttt 602 ||||||||||||||||| | ||| || ||||| || || |||||| | | ||| ||||| Sbjct: 26318 atgtggatgctcttcccgaaggaagaggagtatattgagtggttcaaaaaggcagggttc 26259 Query: 603 aaggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggcatggc 662 ||||| ||| |||||| ||||| || || || ||||||||||||| ||| ||||||||| Sbjct: 26258 aaggatgtcaagctcaaaaggattggaccaaaatggtaccgtggtgtccgaaggcatggc 26199 Query: 663 ctggtcatagggtgttgtgtcacgggcatcaagacacaaagtggagactcccccttgcag 722 ||| | || || || | ||| |||||| |||| | | || |||||||||||| |||||| Sbjct: 26198 ctgattatgggatgctctgtgacgggcgtcaaaagagaacatggagactcccctttgcag 26139 Score = 91.7 bits (46), Expect = 6e-15 Identities = 135/164 (82%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 718 tgcagcttggtccgaaggttgaggatgtgagcaagccacatgtgaaccccgtcttcgtct 777 ||||||||||||| |||||||||||||| ||||| || |||||| || || | || Sbjct: 25358 tgcagcttggtccaaaggttgaggatgtcagcaaacc---tgtgaatcctatcaccttcc 25302 Query: 778 tctttcggttcctcattggaacaatatgcgccacatactttttcctagtgcctatttaca 837 |||| || |||||||| ||||||||||| || |||||| | | || |||||||| |||| Sbjct: 25301 tcttccgcttcctcatgggaacaatatgtgctgcatactatgttctggtgcctatctaca 25242 Query: 838 tgtggatcaaggacaagattgtgccccaaggcaggcccatctaa 881 ||||||| |||||| ||||||||||| |||||| ||| |||||| Sbjct: 25241 tgtggataaaggaccagattgtgcccaaaggcatgccgatctaa 25198
>ref|NM_001065569.1| Oryza sativa (japonica cultivar-group) Os07g0179300 (Os07g0179300) mRNA, complete cds Length = 726 Score = 111 bits (56), Expect = 6e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 352 agggtgacgccgaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctg 411 |||||||||| |||||||| |||| ||| || ||||| || || || || ||||| |||| Sbjct: 200 agggtgacgctgaggacctcccctacccgactgacacatttgatcgctatgtctctgctg 259 Query: 412 gcagcattgagtattggcctgatccacaacgggggatcagggaggcctacagggtcctga 471 | ||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 260 ggagcattgagtactggcctgatccacaacgaggaatcagggaagcctacagggtcctga 319 Score = 105 bits (53), Expect = 4e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||||| || ||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 364 ttttggctgtcacgcttcttcgccgacatgtggatgctcttccccaaggaagaagagtac 423 Query: 576 atggaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaag 635 || ||||||||| ||| ||| ||||| |||| ||| || ||| || || |||||||| Sbjct: 424 atagaatggttccagaaggcagggttccaggatgtcaagatcaagagaattgggcccaaa 483 Query: 636 tggtaccgtggtg 648 |||||||| |||| Sbjct: 484 tggtaccgcggtg 496 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 198 ctcaaggtggtcgatgtcggcggtggcactgggttcaccac 238 |||||||| |||||||| || |||||||||||||||||||| Sbjct: 46 ctcaaggttgtcgatgttggtggtggcactgggttcaccac 86
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 105 bits (53), Expect = 4e-19 Identities = 113/133 (84%) Strand = Plus / Minus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||||| || ||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 4214745 ttttggctgtcacgcttcttcgccgacatgtggatgctcttccccaaggaagaagagtac 4214686 Query: 576 atggaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaag 635 || ||||||||| ||| ||| ||||| |||| ||| || ||| || || |||||||| Sbjct: 4214685 atagaatggttccagaaggcagggttccaggatgtcaagatcaagagaattgggcccaaa 4214626 Query: 636 tggtaccgtggtg 648 |||||||| |||| Sbjct: 4214625 tggtaccgcggtg 4214613 Score = 85.7 bits (43), Expect = 4e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 413 cagcattgagtattggcctgatccacaacgggggatcagggaggcctacagggtcctga 471 |||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 4214848 cagcattgagtactggcctgatccacaacgaggaatcagggaagcctacagggtcctga 4214790 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 ctcaaggtggtcgatgtcggcggtggcactgggttcaccac 238 |||||||| |||||||| || |||||||||||||||||||| Sbjct: 4215888 ctcaaggttgtcgatgttggtggtggcactgggttcaccac 4215848
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 105 bits (53), Expect = 4e-19 Identities = 113/133 (84%) Strand = Plus / Minus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||||| || ||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 98367 ttttggctgtcacgcttcttcgccgacatgtggatgctcttccccaaggaagaagagtac 98308 Query: 576 atggaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaag 635 || ||||||||| ||| ||| ||||| |||| ||| || ||| || || |||||||| Sbjct: 98307 atagaatggttccagaaggcagggttccaggatgtcaagatcaagagaattgggcccaaa 98248 Query: 636 tggtaccgtggtg 648 |||||||| |||| Sbjct: 98247 tggtaccgcggtg 98235 Score = 85.7 bits (43), Expect = 4e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 413 cagcattgagtattggcctgatccacaacgggggatcagggaggcctacagggtcctga 471 |||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 98470 cagcattgagtactggcctgatccacaacgaggaatcagggaagcctacagggtcctga 98412 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 ctcaaggtggtcgatgtcggcggtggcactgggttcaccac 238 |||||||| |||||||| || |||||||||||||||||||| Sbjct: 99510 ctcaaggttgtcgatgttggtggtggcactgggttcaccac 99470
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 105 bits (53), Expect = 4e-19 Identities = 113/133 (84%) Strand = Plus / Minus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||||| || ||||||||||| |||||||||||||||||||||| ||| ||||||||| Sbjct: 35799 ttttggctgtcacgcttcttcgccgacatgtggatgctcttccccaaggaagaagagtac 35740 Query: 576 atggaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaag 635 || ||||||||| ||| ||| ||||| |||| ||| || ||| || || |||||||| Sbjct: 35739 atagaatggttccagaaggcagggttccaggatgtcaagatcaagagaattgggcccaaa 35680 Query: 636 tggtaccgtggtg 648 |||||||| |||| Sbjct: 35679 tggtaccgcggtg 35667 Score = 85.7 bits (43), Expect = 4e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 413 cagcattgagtattggcctgatccacaacgggggatcagggaggcctacagggtcctga 471 |||||||||||| ||||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 35902 cagcattgagtactggcctgatccacaacgaggaatcagggaagcctacagggtcctga 35844 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 ctcaaggtggtcgatgtcggcggtggcactgggttcaccac 238 |||||||| |||||||| || |||||||||||||||||||| Sbjct: 36942 ctcaaggttgtcgatgttggtggtggcactgggttcaccac 36902
>emb|X85103.1|OSPCRCD O.sativa mRNA for PCR clone D Length = 360 Score = 103 bits (52), Expect = 1e-18 Identities = 147/178 (82%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 704 tggagactcccccttgcagcttggtccgaaggttgaggatgtgagcaagccacatgtgaa 763 |||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 16 tggagactcccctttgcagcttggtccaaaggttgaggatgtcagcaa---acctgtgaa 72 Query: 764 ccccgtcttcgtcttctttcggttcctcattggaacaatatgcgccacatactttttcct 823 || || | || |||| || |||||||| ||||||||||| || |||||| | | || Sbjct: 73 tcctatcaccttcctcttccgcttcctcatgggaacaatatgtgctgcatactatgttct 132 Query: 824 agtgcctatttacatgtggatcaaggacaagattgtgccccaaggcaggcccatctaa 881 |||||||| ||||||||||| |||||| ||||||||||| ||||| ||| |||||| Sbjct: 133 ggtgcctatctacatgtggataaaggaccagattgtgcccacaggcatgccgatctaa 190
>emb|BX823122.1|CNS0A7AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1212 Score = 99.6 bits (50), Expect = 2e-17 Identities = 110/130 (84%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 736 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 795 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || ||||||||||| |||||| ||||| || ||||||||| Sbjct: 796 gagtggttcaagaatgccggttttaaggacgttcagctcaagaggattggccccaagtgg 855 Query: 639 taccgtggtg 648 |||||||||| Sbjct: 856 taccgtggtg 865 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 283 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 342 Query: 126 ttcaa 130 |||| Sbjct: 343 atcaa 347
>gb|BT025886.1| Arabidopsis thaliana At3g63410 mRNA, complete cds Length = 1017 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 655 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 714 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 715 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 774 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 775 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 821 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 202 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 261 Query: 126 ttcaa 130 |||| Sbjct: 262 atcaa 266
>ref|NM_116206.2| Arabidopsis thaliana APG1 (ALBINO OR PALE GREEN MUTANT 1); methyltransferase (APG1) mRNA, complete cds Length = 1734 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 771 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 830 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 831 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 890 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 891 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 937 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 318 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 377 Query: 126 ttcaa 130 |||| Sbjct: 378 atcaa 382
>gb|AY333781.1| Chlamydomonas reinhardtii MPBQ/MSBQ methyltransferase (VTE3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1014 Score = 93.7 bits (47), Expect = 1e-15 Identities = 98/115 (85%) Strand = Plus / Plus Query: 352 agggtgacgccgaggaccttcccttccccaccgacaccttcgaccgatacgtctccgctg 411 |||| |||||||||||||| |||||||||||||||||||| ||||| ||||| ||||| | Sbjct: 485 agggcgacgccgaggacctgcccttccccaccgacacctttgaccgctacgtgtccgccg 544 Query: 412 gcagcattgagtattggcctgatccacaacgggggatcagggaggcctacagggt 466 || ||| ||||| ||||| || || || || || ||| |||||||||||||||| Sbjct: 545 gctccatcgagtactggcccgagccgcagcgcggcatccgggaggcctacagggt 599 Score = 71.9 bits (36), Expect = 5e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 528 cgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatggaatggttc 587 ||||||||||| ||| ||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 661 cgcttcttcgcggacgcgtggatgctgttccccacggaggaagagtacatcgagtggttc 720 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 267 gagaacgtgacgctgatcgaccagtcgccgcaccaactcgacaaggcca 315 ||||||||||||||||| |||||||| |||||||| || | |||||||| Sbjct: 400 gagaacgtgacgctgatggaccagtcaccgcaccagctggccaaggcca 448
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Minus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 38554 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 38495 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 38494 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 38435 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 38434 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 38388 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Minus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 39101 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 39042 Query: 126 ttcaa 130 |||| Sbjct: 39041 atcaa 39037
>dbj|AB054257.1| Arabidopsis thaliana mRNA for APG1, complete cds Length = 1017 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 655 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 714 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 715 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 774 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 775 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 821 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 202 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 261 Query: 126 ttcaa 130 |||| Sbjct: 262 atcaa 266
>emb|BX822388.1|CNS0A78A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1171 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 653 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 712 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 713 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 772 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 773 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 819 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 200 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 259 Query: 126 ttcaa 130 |||| Sbjct: 260 atcaa 264
>emb|BX823184.1|CNS0A772 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1231 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 752 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 811 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 812 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 871 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 872 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 918 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 299 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 358 Query: 126 ttcaa 130 |||| Sbjct: 359 atcaa 363
>emb|BX822319.1|CNS0A73F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1210 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 728 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 787 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 788 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 847 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 848 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 894 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 274 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 333 Query: 126 ttcaa 130 |||| Sbjct: 334 atcaa 338
>emb|BX823904.1|CNS0A6LO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1215 Score = 93.7 bits (47), Expect = 1e-15 Identities = 137/167 (82%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 702 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 761 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 762 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 821 Query: 639 taccgtggtgcccgtaggcatggcctggtcatagggtgttgtgtcac 685 |||||||||| || ||||| ||||| |||| || |||| |||||| Sbjct: 822 taccgtggtgttcgcaggcacggccttatcatgggatgttctgtcac 868 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 249 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 308 Query: 126 ttcaa 130 |||| Sbjct: 309 atcaa 313
>emb|BX825577.1|CNS0A6FE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1139 Score = 91.7 bits (46), Expect = 6e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||| Sbjct: 656 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagagtacatt 715 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 716 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 775 Query: 639 taccgtggtg 648 |||||||||| Sbjct: 776 taccgtggtg 785 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 203 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 262 Query: 126 ttcaa 130 |||| Sbjct: 263 atcaa 267
>gb|AY085864.1| Arabidopsis thaliana clone 19143 mRNA, complete sequence Length = 1169 Score = 83.8 bits (42), Expect = 1e-12 Identities = 108/130 (83%) Strand = Plus / Plus Query: 519 tggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtacatg 578 ||||| ||||||||||| |||| | |||||||||||||||| ||||||||| ||||| Sbjct: 737 tggctctctcgcttcttttctgatgtctggatgctcttccccaaggaggaagaatacatt 796 Query: 579 gaatggttcgagagggcggggtttaaggacgtcgagctcactaggatcgggcccaagtgg 638 || |||||| ||| || || || |||||||| |||||| ||||| || ||||||||| Sbjct: 797 gagtggttcaagaatgccggtttcaaggacgttcagctcaagaggattggccccaagtgg 856 Query: 639 taccgtggtg 648 |||||||||| Sbjct: 857 taccgtggtg 866 Score = 42.1 bits (21), Expect = 4.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 66 cagcacaaaaaggaggccctctggttctacagcttcatctccttcggctacgaccatgtc 125 |||||||| |||||||| |||||||||||| ||| | ||| ||| |||||||||||| Sbjct: 284 cagcacaagaaggaggcttactggttctacaggttcttatccatcgtatacgaccatgtc 343 Query: 126 ttcaa 130 |||| Sbjct: 344 atcaa 348
>emb|X56963.1|SO37KDPM Spinach mRNA for chloroplast 37kD inner envelope membrane protein Length = 1226 Score = 75.8 bits (38), Expect = 3e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 513 acattttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagag 572 ||||||||||| ||||||||||| || || |||||||||||||||| | |||||||||| Sbjct: 671 acattttggctgtctcgcttctttgcggatgtgtggatgctcttcccaaaggaggaagag 730 Query: 573 tacatggaatggtt 586 || || |||||||| Sbjct: 731 tatatcgaatggtt 744 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 704 tggagactcccccttgcagcttggtccgaaggttgaggatgt 745 |||||| || ||||||||||||||||| ||||| |||||||| Sbjct: 862 tggagattctcccttgcagcttggtccaaaggtcgaggatgt 903
>gb|AY486009.1| Thlaspi caerulescens putative protein-like mRNA, partial sequence Length = 515 Score = 71.9 bits (36), Expect = 5e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 544 tgtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggttta 603 |||||||||| ||||||| ||||||||||||||| || |||||| ||| || || || | Sbjct: 399 tgtggatgcttttccccaaggaggaagagtacattgattggttcaagaaagctggcttca 340 Query: 604 aggacgtcgagctcactaggatcgggcccaagtggtaccgtggtgcccgtaggca 658 ||||||| |||||| |||| || |||||||||| |||||||| ||| ||||| Sbjct: 339 aggacgttcagctcaagcggattggccccaagtggtnccgtggtgtccgcaggca 285
>gb|BT014152.1| Lycopersicon esculentum clone 133271F, mRNA sequence Length = 1488 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 717 ttgcagcttggtccgaaggttgaggatgtgagcaagcc 754 |||||||| ||||| ||||||||||||||||||||||| Sbjct: 1062 ttgcagctcggtcccaaggttgaggatgtgagcaagcc 1099 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 gctggcagcattgagtattggcctgatccaca 439 ||||| ||||||||||||||||| |||||||| Sbjct: 753 gctggaagcattgagtattggccagatccaca 784
>emb|X94968.1|NTENVMEMP N.tabacum mRNA for 37kDa chloroplast inner envelope membrane polypeptide Length = 1355 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 717 ttgcagcttggtccgaaggttgaggatgtgagcaagcc 754 |||||||| || |||||||||||||||||||||||||| Sbjct: 956 ttgcagctcggcccgaaggttgaggatgtgagcaagcc 993 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 510 ccgacattttggctatctcgcttcttcgctgacatgtggatgctctt 556 ||||| |||||||||||||| ||||| || || |||||||||||||| Sbjct: 749 ccgacgttttggctatctcgtttctttgcagatatgtggatgctctt 795 Score = 48.1 bits (24), Expect = 0.076 Identities = 30/32 (93%) Strand = Plus / Plus Query: 408 gctggcagcattgagtattggcctgatccaca 439 ||||| ||||||||||||||||| |||||||| Sbjct: 647 gctggaagcattgagtattggcccgatccaca 678
>gb|BT012858.1| Lycopersicon esculentum clone 113946R, mRNA sequence Length = 1278 Score = 56.0 bits (28), Expect = 3e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||| | ||||| ||||| ||||| |||||||||||||||| | ||||||||| ||| Sbjct: 710 ttttggttgtctcgtttctttgctgatgtgtggatgctcttccctaaggaggaagaatac 769 Query: 576 atggaatggttcgaga 591 || || ||||| |||| Sbjct: 770 atagagtggtttgaga 785
>gb|DQ229836.1| Helianthus annuus cultivar RHA280 MPBQ/MSBQ methyltransferase 1 (MT-1) gene, complete cds Length = 4517 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 509 tccgacattttggctatctcgcttcttcgctgacatgtggatgctcttccccacggagga 568 ||||||||||||| | ||||| ||||| || |||||||||||| | || || | ||| || Sbjct: 3365 tccgacattttggttgtctcgtttctttgcagacatgtggatgttgtttccaaaggaaga 3424 Query: 569 agagtacatggaatggttcgagagggcggggtttaa 604 ||| || || |||||||| || | |||||||||||| Sbjct: 3425 agaatatattgaatggtttgaaaaggcggggtttaa 3460
>gb|DQ229835.1| Helianthus annuus cultivar NMS373 MPBQ/MSBQ methyltransferase 1 (MT-1) gene, complete cds Length = 4517 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 509 tccgacattttggctatctcgcttcttcgctgacatgtggatgctcttccccacggagga 568 ||||||||||||| | ||||| ||||| || |||||||||||| | || || | ||| || Sbjct: 3365 tccgacattttggttgtctcgtttctttgcagacatgtggatgttgtttccaaaggaaga 3424 Query: 569 agagtacatggaatggttcgagagggcggggtttaa 604 ||| || || |||||||| || | |||||||||||| Sbjct: 3425 agaatatattgaatggtttgaaaaggcggggtttaa 3460
>gb|AF181987.1|AF181987 Petunia x hybrida 37 kDa chloroplast inner membrane protein mRNA, partial cds; nuclear gene for chloroplast product Length = 220 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 721 agcttggtccgaaggttgaggatgtgagcaagcc 754 |||| ||||| ||||||||||||||||||||||| Sbjct: 51 agctcggtccaaaggttgaggatgtgagcaagcc 84
>emb|X74814.1|EGOMTRN E.gunnii OMT mRNA for O-Methyltransferase Length = 1452 Score = 48.1 bits (24), Expect = 0.076 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactggg 230 ||||||||||||||| |||||||||||| Sbjct: 692 ggtggtcgatgtcggaggtggcactggg 719
>gb|AF168777.1|AF168777 Eucalyptus globulus caffeic acid O-methyltransferase (COMT2) gene, partial cds Length = 3022 Score = 48.1 bits (24), Expect = 0.076 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactggg 230 ||||||||||||||| |||||||||||| Sbjct: 2291 ggtggtcgatgtcgggggtggcactggg 2318
>emb|CT987981.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 934 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 152 ggtggtcgatgtcggaggtggcactgg 178
>emb|CT987251.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 595 Score = 46.1 bits (23), Expect = 0.30 Identities = 53/63 (84%) Strand = Plus / Plus Query: 545 gtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggtttaa 604 |||||||||||| || | ||||||||| ||||| || ||||| |||| ||| ||||| || Sbjct: 22 gtggatgctctttccgaaggaggaagaatacattgagtggtttgagaaggctgggttcaa 81 Query: 605 gga 607 ||| Sbjct: 82 gga 84
>emb|CT986420.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 877 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 152 ggtggtcgatgtcggaggtggcactgg 178
>emb|CT984651.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 846 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 80 ggtggtcgatgtcggaggtggcactgg 106
>emb|CT984374.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 752 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 54 ggtggtcgatgtcggaggtggcactgg 80
>emb|CT983911.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 871 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 114 ggtggtcgatgtcggaggtggcactgg 140
>emb|CT981413.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 898 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 203 ggtggtcgatgtcggcggtggcactgg 229 ||||||||||||||| ||||||||||| Sbjct: 152 ggtggtcgatgtcggaggtggcactgg 178
>emb|CT980436.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 641 Score = 46.1 bits (23), Expect = 0.30 Identities = 53/63 (84%) Strand = Plus / Plus Query: 545 gtggatgctcttccccacggaggaagagtacatggaatggttcgagagggcggggtttaa 604 |||||||||||| || | ||||||||| ||||| || ||||| |||| ||| ||||| || Sbjct: 22 gtggatgctctttccgaaggaggaagaatacattgagtggtttgagaaggctgggttcaa 81 Query: 605 gga 607 ||| Sbjct: 82 gga 84
>ref|XM_001210063.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_07377) mRNA, complete cds Length = 1449 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 aggtggtcgatgtcggcggtgg 223 |||||||||||||||||||||| Sbjct: 845 aggtggtcgatgtcggcggtgg 866
>gb|AC106830.11| Mus musculus chromosome 15, clone RP24-402C20, complete sequence Length = 171577 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1142 tttccatgtataaataaataaa 1163 |||||||||||||||||||||| Sbjct: 14880 tttccatgtataaataaataaa 14859
>gb|AC134560.5| Mus musculus BAC clone RP24-100B13 from chromosome 16, complete sequence Length = 175179 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1152 taaataaataaagaagcagttt 1173 |||||||||||||||||||||| Sbjct: 121123 taaataaataaagaagcagttt 121102
>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13, complete sequence Length = 134506 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 368 ccttcccttccccaccgacacc 389 |||||||||||||||||||||| Sbjct: 117988 ccttcccttccccaccgacacc 117967
>gb|AC012456.10| Homo sapiens BAC clone RP11-484O9 from 2, complete sequence Length = 174157 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1146 catgtataaataaataaagaag 1167 |||||||||||||||||||||| Sbjct: 84567 catgtataaataaataaagaag 84588
>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence Length = 171368 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 ccttcccttccccaccgacacc 389 |||||||||||||||||||||| Sbjct: 27985 ccttcccttccccaccgacacc 28006
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 aggtggtcgatgtcggcggtg 222 ||||||||||||||||||||| Sbjct: 1043304 aggtggtcgatgtcggcggtg 1043284
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 gatcccgagaacgtgacgctg 281 ||||||||||||||||||||| Sbjct: 2425266 gatcccgagaacgtgacgctg 2425286
>gb|AC162377.2| Mus musculus BAC clone RP24-511C17 from chromosome 13, complete sequence Length = 139617 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 960 tgtgttgtgtatctatatatatgtg 984 |||||||||||||||||| |||||| Sbjct: 63610 tgtgttgtgtatctatatgtatgtg 63634
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence Length = 109162 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1149 gtataaataaataaagaagca 1169 ||||||||||||||||||||| Sbjct: 74302 gtataaataaataaagaagca 74282
>gb|AC087807.2| Felis catus clone RP86-294B21, complete sequence Length = 121506 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 960 tgtgttgtgtatctatatatatgtg 984 |||||||||||||||||||| |||| Sbjct: 48217 tgtgttgtgtatctatatatgtgtg 48241
>gb|AC133201.2| Mus musculus BAC clone RP23-74A8 from chromosome 3, complete sequence Length = 184783 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1210 aatttcaatcacatcttctct 1230 ||||||||||||||||||||| Sbjct: 123772 aatttcaatcacatcttctct 123792
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 aaataaagaagcagttttatt 1177 ||||||||||||||||||||| Sbjct: 16349 aaataaagaagcagttttatt 16369
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1153 aaataaataaagaagcagttt 1173 ||||||||||||||||||||| Sbjct: 79888 aaataaataaagaagcagttt 79868
>emb|CT010480.10| Mouse DNA sequence from clone RP23-313E11 on chromosome 13, complete sequence Length = 203636 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 960 tgtgttgtgtatctatatatatgtg 984 |||||||||||||||||| |||||| Sbjct: 146093 tgtgttgtgtatctatatgtatgtg 146117
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1153 aaataaataaagaagcagttt 1173 ||||||||||||||||||||| Sbjct: 8543 aaataaataaagaagcagttt 8523
>gb|AC166977.6| Mus musculus chromosome 1, clone RP24-291A4, complete sequence Length = 151589 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 aaataaagaagcagttttatt 1177 ||||||||||||||||||||| Sbjct: 150231 aaataaagaagcagttttatt 150251
>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7, complete sequence Length = 190528 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1143 ttccatgtataaataaataaa 1163 ||||||||||||||||||||| Sbjct: 9774 ttccatgtataaataaataaa 9754
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1157 aaataaagaagcagttttatt 1177 ||||||||||||||||||||| Sbjct: 111200 aaataaagaagcagttttatt 111180
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 gtggtcgatgtcggcggtggc 224 ||||||||||||||||||||| Sbjct: 2907823 gtggtcgatgtcggcggtggc 2907803 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 tcaccacgctcggcgtcgtcc 252 ||||||||||||||||||||| Sbjct: 5617212 tcaccacgctcggcgtcgtcc 5617192
>emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chromosome 4, complete sequence Length = 239570 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1143 ttccatgtataaataaataaa 1163 ||||||||||||||||||||| Sbjct: 111982 ttccatgtataaataaataaa 112002
>gb|AC109180.20| Mus musculus chromosome 10, clone RP23-13J14, complete sequence Length = 212628 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1149 gtataaataaataaagaagca 1169 ||||||||||||||||||||| Sbjct: 90654 gtataaataaataaagaagca 90634
>gb|DQ229839.1| Helianthus annuus cultivar LG24 gypsy-like retrotransposon, complete sequence; and nonfunctional MPBQ/MSBQ methyltransferase 1 (MT-1) gene, partial sequence Length = 9460 Score = 42.1 bits (21), Expect = 4.7 Identities = 72/89 (80%) Strand = Plus / Plus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||| | ||||| ||||| || |||||||||||| | || || | ||| ||||| || Sbjct: 7882 ttttggttgtctcgtttctttgcagacatgtggatgttgtttccaaaggaagaagaatat 7941 Query: 576 atggaatggttcgagagggcggggtttaa 604 || |||||||| || | |||||||||||| Sbjct: 7942 attgaatggtttgaaaaggcggggtttaa 7970
>gb|DQ229838.1| Helianthus annuus cultivar R112 gypsy-like retrotransposon, complete sequence; and nonfunctional MPBQ/MSBQ methyltransferase 1 (MT-1) gene, partial sequence Length = 9460 Score = 42.1 bits (21), Expect = 4.7 Identities = 72/89 (80%) Strand = Plus / Plus Query: 516 ttttggctatctcgcttcttcgctgacatgtggatgctcttccccacggaggaagagtac 575 |||||| | ||||| ||||| || |||||||||||| | || || | ||| ||||| || Sbjct: 7882 ttttggttgtctcgtttctttgcagacatgtggatgttgtttccaaaggaagaagaatat 7941 Query: 576 atggaatggttcgagagggcggggtttaa 604 || |||||||| || | |||||||||||| Sbjct: 7942 attgaatggtttgaaaaggcggggtttaa 7970
>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7 Length = 239057 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1146 catgtataaataaataaagaa 1166 ||||||||||||||||||||| Sbjct: 225997 catgtataaataaataaagaa 226017
>dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB611H5 Length = 144828 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1146 catgtataaataaataaagaa 1166 ||||||||||||||||||||| Sbjct: 22378 catgtataaataaataaagaa 22398
>dbj|AB070947.1| Streptomyces avermitilis polyketide-9 biosynthetic gene cluster Length = 24268 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 204 gtggtcgatgtcggcggtggc 224 ||||||||||||||||||||| Sbjct: 10046 gtggtcgatgtcggcggtggc 10066 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 208,604,849 Number of extensions: 12325043 Number of successful extensions: 268187 Number of sequences better than 10.0: 72 Number of HSP's gapped: 268179 Number of HSP's successfully gapped: 127 Length of query: 1241 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1218 Effective length of database: 18,503,978,556 Effective search space: 22537845881208 Effective search space used: 22537845881208 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)