| Clone Name | FLbaf110f02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070285:Os07g0585500 | 30 | 1.4 | 2 | AK070390:Os01g0935000 | 30 | 1.9 | 3 | Os06g0625300:Os06g0625300 | 29 | 3.2 | 4 | AK110580:Os04g0400800 | 29 | 3.2 | 5 | AK110289: | 29 | 3.2 | 6 | Os02g0731400:Os02g0731400 | 27 | 9.2 | 7 | AK110145:Os09g0535200 | 27 | 9.2 |
|---|
>AK070285:Os07g0585500 | Length = 126 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +1 Query: 175 GGVPAGRLPSGRVPTAGAGAGLPSPGIP 258 G +PA +P+GR+P AGAGLP+ +P Sbjct: 41 GRLPAAGVPTGRLP---AGAGLPTGWVP 65 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 150 LHSKGIQGRRSTRRQATLRPGTHRRGRGRATLP 248 + S +GRR R+ LRP T RR A LP Sbjct: 6 IRSPDTRGRRRRRKDELLRPATSRRRPAAARLP 38
>AK070390:Os01g0935000 | Length = 476 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2 Query: 257 GIPGEGSPAPAPAVGTRPEGSLPAGTPPSLDTLAV 153 G+P + PAP AV + + SLP PS + +A+ Sbjct: 36 GVPSDPPPAPPTAVKKKKKRSLPGTPDPSAEVVAL 70
>Os06g0625300:Os06g0625300 | Length = 667 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 Query: 251 PGEGSPAPAPAVGTRPEGSLPA 186 PG SPAPAPAV P ++P+ Sbjct: 251 PGPPSPAPAPAVSAPPPPAVPS 272
>AK110580:Os04g0400800 | Length = 282 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -2 Query: 242 GSPAPAPAVGTRPEGSLPAGTPPSLD 165 G PAPAV P + A TPP +D Sbjct: 87 GGTTPAPAVANPPPAATVAATPPKVD 112
>AK110289: | Length = 709 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 Query: 175 GGVPAGRLPSGRVPTAGAGAGLPSPGIP 258 G VP G P+G VP A A +P PG+P Sbjct: 469 GAVPGGYPPAGVVPAAAPPA-VPPPGVP 495
>Os02g0731400:Os02g0731400 | Length = 172 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +3 Query: 147 CLHSKGIQGRRSTRRQATLRPGTH 218 C KG++ RS R + TLR GTH Sbjct: 128 CTVPKGVRKMRSGRDKVTLRKGTH 151
>AK110145:Os09g0535200 | Length = 861 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -2 Query: 236 PAPAPAVGTRPEGSLPAGTPP 174 PAPAP V T P + PA PP Sbjct: 201 PAPAPPVPTPPAPTPPADVPP 221 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,195,388 Number of extensions: 228291 Number of successful extensions: 1327 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1320 Number of HSP's successfully gapped: 8 Length of query: 220 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 123 Effective length of database: 11,515,878 Effective search space: 1416452994 Effective search space used: 1416452994 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)