ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf112l09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066903.1| Oryza sativa (japonica cultivar-group) Os07g0632700 (Os07g0632700) mRNA, complete cds Length = 970 Score = 617 bits (311), Expect = e-173 Identities = 524/595 (88%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 241 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 242 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 301 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 397 ||||| || |||||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct: 302 ccgacaaccctctccccgactcccaccgcatctccctcagggtgacgtcaccgtacggga 361 Query: 398 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 457 ||||| |||||||| | |||||||||| ||||||| ||||||| |||||||| |||| Sbjct: 362 acagcgtgcactacgcggagaacgtgccgtcggggaacttcgcgttcacggcgacggagg 421 Query: 458 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 517 |||| |||||||||||||||||||||||||| ||||||||||| || ||| || || | Sbjct: 422 ccggcgactacctggcctgcttctgggcgcccgaccacaagccgccggtctccatcgggt 481 Query: 518 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 577 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 482 tcgagttcgactggaggagcggcgtcgcggccaaggactggtccaacgtcgccaagaagg 541 Query: 578 gcaaggtcgatatgatggaactagagctgaagaagctagaggataccatccaagctatcc 637 | |||||||| ||||||| | ||| ||||||||||||| || |||||| || |||||| Sbjct: 542 ggcaggtcgatgtgatggagatggagttgaagaagctagaagaaaccatcaaatctatcc 601 Query: 638 atgaagaaatgttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcaga 697 |||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||| | Sbjct: 602 atgaagaaatgttttacctacgtgaaagggaggaggaaatgcagaacctgaacaagcaaa 661 Query: 698 caaactcgaggatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcag 757 | ||||| || |||| ||||| | |||||||| || || |||||| | ||||| || | Sbjct: 662 cgaactcaagaatggcatggctcgggttcctctcactcggaatctgcctatccgtcgcgg 721 Query: 758 ggctgcagctgtggcatctgaagacctttttcgagagaaagaagctgctgtagtt 812 |||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 722 ggctgcagctgtggcacctgaagaccttttttgagagaaagaagcttctgtagtt 776 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 109 ctccgatctccggccatggccgcgcg 134 |||||||||||||||||||||||||| Sbjct: 67 ctccgatctccggccatggccgcgcg 92
>dbj|AK060066.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H05, full insert sequence Length = 971 Score = 617 bits (311), Expect = e-173 Identities = 524/595 (88%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 242 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 243 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 302 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 397 ||||| || |||||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct: 303 ccgacaaccctctccccgactcccaccgcatctccctcagggtgacgtcaccgtacggga 362 Query: 398 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 457 ||||| |||||||| | |||||||||| ||||||| ||||||| |||||||| |||| Sbjct: 363 acagcgtgcactacgcggagaacgtgccgtcggggaacttcgcgttcacggcgacggagg 422 Query: 458 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 517 |||| |||||||||||||||||||||||||| ||||||||||| || ||| || || | Sbjct: 423 ccggcgactacctggcctgcttctgggcgcccgaccacaagccgccggtctccatcgggt 482 Query: 518 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 577 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 tcgagttcgactggaggagcggcgtcgcggccaaggactggtccaacgtcgccaagaagg 542 Query: 578 gcaaggtcgatatgatggaactagagctgaagaagctagaggataccatccaagctatcc 637 | |||||||| ||||||| | ||| ||||||||||||| || |||||| || |||||| Sbjct: 543 ggcaggtcgatgtgatggagatggagttgaagaagctagaagaaaccatcaaatctatcc 602 Query: 638 atgaagaaatgttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcaga 697 |||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||| | Sbjct: 603 atgaagaaatgttttacctacgtgaaagggaggaggaaatgcagaacctgaacaagcaaa 662 Query: 698 caaactcgaggatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcag 757 | ||||| || |||| ||||| | |||||||| || || |||||| | ||||| || | Sbjct: 663 cgaactcaagaatggcatggctcgggttcctctcactcggaatctgcctatccgtcgcgg 722 Query: 758 ggctgcagctgtggcatctgaagacctttttcgagagaaagaagctgctgtagtt 812 |||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 723 ggctgcagctgtggcacctgaagaccttttttgagagaaagaagcttctgtagtt 777 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 109 ctccgatctccggccatggccgcgcg 134 |||||||||||||||||||||||||| Sbjct: 68 ctccgatctccggccatggccgcgcg 93
>gb|DQ245213.1| Zea mays clone 13813 mRNA sequence Length = 968 Score = 609 bits (307), Expect = e-171 Identities = 523/595 (87%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 cggcccgcgcgctgcggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 196 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 ||||||| || |||||||||||||||||||| | ||||| |||||||||||| || || Sbjct: 197 tcaaggttaacgccatggccgtcggcaagtaccacatcgtcagccccgaccccaacttcc 256 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 397 |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 257 ccgatgcccagctccccgaatcgcaccgcatctccctcagggtgacgtcgccgtacggga 316 Query: 398 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 457 |||||||||||||| | ||||||||||||||||| ||||||||||||||||| | |||| Sbjct: 317 acagcatgcactacgcggagaacgtgcagtcgggccacttcgccttcacggcggcggagg 376 Query: 458 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 517 |||| |||||||||||||||||||||||||| ||||| |||||||| |||||| || | Sbjct: 377 ccggcgactacctggcctgcttctgggcgcccgaccataagccaccggtcaccatcgggt 436 Query: 518 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 577 ||||||||||||||| |||||||||| | |||||||||| ||| |||||||||||||| Sbjct: 437 tcgagttcgactggaggagcggcgtctccgccaaggactatcccagcgtcgccaagaagg 496 Query: 578 gcaaggtcgatatgatggaactagagctgaagaagctagaggataccatccaagctatcc 637 |||||||||||||||||||| | |||||||||||||||||||| || || || ||| | Sbjct: 497 gcaaggtcgatatgatggaattggagctgaagaagctagaggaaactataaaaaatatac 556 Query: 638 atgaagaaatgttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcaga 697 ||||||| ||||||||||| || |||||||| |||||||||||| || | ||||||| | Sbjct: 557 atgaagagatgttttatctgcgtgaaagggaagaggaaatgcaggacctgaacaggcgaa 616 Query: 698 caaactcgaggatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcag 757 ||||||| ||||||| ||| | | |||||||| |||||| ||||||| || ||||||| Sbjct: 617 caaactcaaggatggcttggttagggttcctctcccttggcgtctgcttatcggtggcag 676 Query: 758 ggctgcagctgtggcatctgaagacctttttcgagagaaagaagctgctgtagtt 812 | ||||||||||||| ||||||||||| || ||||| |||||| |||||||||| Sbjct: 677 gtttgcagctgtggcacctgaagaccttctttgagaggaagaagttgctgtagtt 731
>gb|AY104135.1| Zea mays PCO081417 mRNA sequence Length = 1103 Score = 593 bits (299), Expect = e-166 Identities = 521/595 (87%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 cggcccgcgcgctgcggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 258 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 ||||||| || ||||||||||||| |||||| | ||||| |||||||||||| || | Sbjct: 259 tcaaggttaacgccatggccgtcggaaagtaccacatcgtcagccccgaccccaactcac 318 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 397 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 319 ccgacgcccagctccccgaatcgcaccgcatctccctcagggtgacgtcgccgtacggga 378 Query: 398 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 457 |||||||||||||| | ||||||||||||||||| ||||||||||||||||| | |||| Sbjct: 379 acagcatgcactacgcggagaacgtgcagtcgggccacttcgccttcacggcggcggagg 438 Query: 458 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 517 |||| ||||||||||||||||||||||| || ||||||||||| || |||||| || | Sbjct: 439 ccggcgactacctggcctgcttctgggctcccgaccacaagccgccggtcaccatcgggt 498 Query: 518 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 577 ||||||||||||||| |||||||||| | |||||||||| ||| |||||||||||||| Sbjct: 499 tcgagttcgactggaggagcggcgtctccgccaaggactatcccagcgtcgccaagaagg 558 Query: 578 gcaaggtcgatatgatggaactagagctgaagaagctagaggataccatccaagctatcc 637 |||||||||||||||||||| | |||||||||||||||||||| || || || ||| | Sbjct: 559 gcaaggtcgatatgatggaattggagctgaagaagctagaggaaactataaaaaatatac 618 Query: 638 atgaagaaatgttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcaga 697 ||||||| ||||||||||| || |||||||| |||||||||||| || | ||||||| | Sbjct: 619 atgaagagatgttttatctgcgtgaaagggaagaggaaatgcaggacctgaacaggcgaa 678 Query: 698 caaactcgaggatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcag 757 ||||||| ||||||| ||| | | |||||||| |||||| ||||||| || ||||||| Sbjct: 679 caaactcaaggatggcttggttagggttcctctcccttggcgtctgcttatcggtggcag 738 Query: 758 ggctgcagctgtggcatctgaagacctttttcgagagaaagaagctgctgtagtt 812 | ||||||||||||| ||||||||||| || ||||| |||||| |||||||||| Sbjct: 739 gtttgcagctgtggcacctgaagaccttctttgagaggaagaagttgctgtagtt 793
>emb|CT829213.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA017P14, full insert sequence Length = 493 Score = 347 bits (175), Expect = 5e-92 Identities = 256/283 (90%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 256 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 257 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 316 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 397 ||||| || |||||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct: 317 ccgacaaccctctccccgactcccaccgcatctccctcagggtgacgtcaccgtacggga 376 Query: 398 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 457 ||||| |||||||| | |||||||||| ||||||| ||||||| |||||||| |||| Sbjct: 377 acagcgtgcactacgcggagaacgtgccgtcggggaacttcgcgttcacggcgacggagg 436 Query: 458 ccggggactacctggcctgcttctgggcgcctgaccacaagcc 500 |||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 437 ccggcgactacctggcctgcttctgggcgcccgaccacaagcc 479 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 109 ctccgatctccggccatggccgcgcg 134 |||||||||||||||||||||||||| Sbjct: 82 ctccgatctccggccatggccgcgcg 107
>ref|NM_001056754.1| Oryza sativa (japonica cultivar-group) Os03g0376000 (Os03g0376000) mRNA, complete cds Length = 1061 Score = 317 bits (160), Expect = 4e-83 Identities = 382/456 (83%) Strand = Plus / Plus Query: 348 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 407 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 388 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 447 Query: 408 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 467 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 448 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 507 Query: 468 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 527 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 508 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 567 Query: 528 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 587 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 568 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 627 Query: 588 tatgatggaactagagctgaagaagctagaggataccatccaagctatccatgaagaaat 647 ||||||||| | ||||| |||||||| |||||||| ||| | |||||||||||||||| Sbjct: 628 tatgatggaggttgagctcaagaagctggaggatactatcaactctatccatgaagaaat 687 Query: 648 gttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcagacaaactcgag 707 ||||||||| |||| |||||||||||| |||||| | | |||||| |||||||| || Sbjct: 688 gttttatcttcgcgcaagggaggaggagatgcaggaactgaacaggagaacaaactcaag 747 Query: 708 gatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcagggctgcagct 767 ||||| ||||| ||||| |||| || | |||||| |||| ||||| ||| ||||| | Sbjct: 748 gatggcttggcttggtttcttctcactagctatctgcctgtcagtggcggggttgcagtt 807 Query: 768 gtggcatctgaagacctttttcgagagaaagaagct 803 |||||||||||||| ||| || |||||||||||||| Sbjct: 808 gtggcatctgaagaacttctttgagagaaagaagct 843 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 232 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 291 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 239 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 298 Query: 292 atggccgtcggcaagtac 309 ||||| || ||||||||| Sbjct: 299 atggcggtgggcaagtac 316
>dbj|AK059565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H07, full insert sequence Length = 1061 Score = 309 bits (156), Expect = 1e-80 Identities = 381/456 (83%) Strand = Plus / Plus Query: 348 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 407 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 388 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccttacggcaacagcctgca 447 Query: 408 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 467 |||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| Sbjct: 448 ctactcggagaacgtgcagtcgggcaacttcgccttcacgacgtccgaggccggggacta 507 Query: 468 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 527 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 508 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 567 Query: 528 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 587 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 568 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 627 Query: 588 tatgatggaactagagctgaagaagctagaggataccatccaagctatccatgaagaaat 647 ||||||||| | ||||| |||||||| |||||||| ||| | |||||||||||||||| Sbjct: 628 tatgatggaggttgagctcaagaagctggaggatactatcaactctatccatgaagaaat 687 Query: 648 gttttatctacgcgaaagggaggaggaaatgcagaacatcaacaggcagacaaactcgag 707 ||||||||| |||| |||||||||||| |||||| | | |||||| |||||||| || Sbjct: 688 gttttatcttcgcgcaagggaggaggagatgcaggaactgaacaggagaacaaactcaag 747 Query: 708 gatggggtggctgagtttcctctcgcttggcatctgcttgtccgtggcagggctgcagct 767 ||||| ||||| ||||| |||| || | |||||| |||| ||||| ||| ||||| | Sbjct: 748 gatggcttggcttggtttcttctcactagctatctgcctgtcagtggcggggttgcagtt 807 Query: 768 gtggcatctgaagacctttttcgagagaaagaagct 803 |||||||||||||| ||| || |||||||||||||| Sbjct: 808 gtggcatctgaagaacttctttgagagaaagaagct 843 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Plus Query: 232 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 291 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 239 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 298 Query: 292 atggccgtcggcaagtac 309 ||||| || ||||||||| Sbjct: 299 atggcggtgggcaagtac 316
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 228 bits (115), Expect = 3e-56 Identities = 187/211 (88%) Strand = Plus / Plus Query: 378 ggtgacgtcgccgtacgggaacagcatgcactactccgagaacgtgcagtcggggcactt 437 ||||||||| ||||||||||||||| |||||||| | |||||||||| ||||||| |||| Sbjct: 26189426 ggtgacgtcaccgtacgggaacagcgtgcactacgcggagaacgtgccgtcggggaactt 26189485 Query: 438 cgccttcacggctgttgaggccggggactacctggcctgcttctgggcgcctgaccacaa 497 ||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 26189486 cgcgttcacggcgacggaggccggcgactacctggcctgcttctgggcgcccgaccacaa 26189545 Query: 498 gccacccgtcaccgtcaccttcgagttcgactggaagagcggcgtcacggccaaggactg 557 ||| || ||| || || |||||||||||||||| |||||||||| ||||||||||||| Sbjct: 26189546 gccgccggtctccatcgggttcgagttcgactggaggagcggcgtcgcggccaaggactg 26189605 Query: 558 gtccaacgtcgccaagaagggcaaggtcgat 588 ||||||||||||||||||||| |||||||| Sbjct: 26189606 gtccaacgtcgccaagaaggggcaggtcgat 26189636 Score = 212 bits (107), Expect = 2e-51 Identities = 149/163 (91%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26189134 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 26189193 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 26189194 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 26189253 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggt 380 ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 26189254 ccgacaaccctctccccgactcccaccgcatctccctcagggt 26189296 Score = 121 bits (61), Expect = 5e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 664 agggaggaggaaatgcagaacatcaacaggcagacaaactcgaggatggggtggctgagt 723 ||||||||||||||||||||| | |||| ||| || ||||| || |||| ||||| | Sbjct: 26191194 agggaggaggaaatgcagaacctgaacaagcaaacgaactcaagaatggcatggctcggg 26191253 Query: 724 ttcctctcgcttggcatctgcttgtccgtggcagggctgcagctgtggcatctgaagacc 783 |||||||| || || |||||| | ||||| || ||||||||||||||||| ||||||||| Sbjct: 26191254 ttcctctcactcggaatctgcctatccgtcgcggggctgcagctgtggcacctgaagacc 26191313 Query: 784 tttttcgagagaaagaagctgctgtagtt 812 ||||| |||||||||||||| |||||||| Sbjct: 26191314 ttttttgagagaaagaagcttctgtagtt 26191342 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 605 tgaagaagctagaggataccatccaagctatccatgaagaaatgttttatctacgcgaaa 664 ||||||||||||| || |||||| || |||||||||||||||||||||| ||||| |||| Sbjct: 26191032 tgaagaagctagaagaaaccatcaaatctatccatgaagaaatgttttacctacgtgaaa 26191091 Query: 665 gg 666 || Sbjct: 26191092 gg 26191093 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 109 ctccgatctccggccatggccgcgcg 134 |||||||||||||||||||||||||| Sbjct: 26189019 ctccgatctccggccatggccgcgcg 26189044
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 228 bits (115), Expect = 3e-56 Identities = 187/211 (88%) Strand = Plus / Plus Query: 378 ggtgacgtcgccgtacgggaacagcatgcactactccgagaacgtgcagtcggggcactt 437 ||||||||| ||||||||||||||| |||||||| | |||||||||| ||||||| |||| Sbjct: 81284 ggtgacgtcaccgtacgggaacagcgtgcactacgcggagaacgtgccgtcggggaactt 81343 Query: 438 cgccttcacggctgttgaggccggggactacctggcctgcttctgggcgcctgaccacaa 497 ||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 81344 cgcgttcacggcgacggaggccggcgactacctggcctgcttctgggcgcccgaccacaa 81403 Query: 498 gccacccgtcaccgtcaccttcgagttcgactggaagagcggcgtcacggccaaggactg 557 ||| || ||| || || |||||||||||||||| |||||||||| ||||||||||||| Sbjct: 81404 gccgccggtctccatcgggttcgagttcgactggaggagcggcgtcgcggccaaggactg 81463 Query: 558 gtccaacgtcgccaagaagggcaaggtcgat 588 ||||||||||||||||||||| |||||||| Sbjct: 81464 gtccaacgtcgccaagaaggggcaggtcgat 81494 Score = 212 bits (107), Expect = 2e-51 Identities = 149/163 (91%) Strand = Plus / Plus Query: 218 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80992 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 81051 Query: 278 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 337 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 81052 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 81111 Query: 338 ccgacgcccagctccccgattcgcaccgcgtctccctcagggt 380 ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 81112 ccgacaaccctctccccgactcccaccgcatctccctcagggt 81154 Score = 121 bits (61), Expect = 5e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 664 agggaggaggaaatgcagaacatcaacaggcagacaaactcgaggatggggtggctgagt 723 ||||||||||||||||||||| | |||| ||| || ||||| || |||| ||||| | Sbjct: 83052 agggaggaggaaatgcagaacctgaacaagcaaacgaactcaagaatggcatggctcggg 83111 Query: 724 ttcctctcgcttggcatctgcttgtccgtggcagggctgcagctgtggcatctgaagacc 783 |||||||| || || |||||| | ||||| || ||||||||||||||||| ||||||||| Sbjct: 83112 ttcctctcactcggaatctgcctatccgtcgcggggctgcagctgtggcacctgaagacc 83171 Query: 784 tttttcgagagaaagaagctgctgtagtt 812 ||||| |||||||||||||| |||||||| Sbjct: 83172 ttttttgagagaaagaagcttctgtagtt 83200 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 605 tgaagaagctagaggataccatccaagctatccatgaagaaatgttttatctacgcgaaa 664 ||||||||||||| || |||||| || |||||||||||||||||||||| ||||| |||| Sbjct: 82890 tgaagaagctagaagaaaccatcaaatctatccatgaagaaatgttttacctacgtgaaa 82949 Query: 665 gg 666 || Sbjct: 82950 gg 82951 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 109 ctccgatctccggccatggccgcgcg 134 |||||||||||||||||||||||||| Sbjct: 80877 ctccgatctccggccatggccgcgcg 80902
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 184 bits (93), Expect = 4e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 348 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 407 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 24054 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 23995 Query: 408 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 467 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 23994 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 23935 Query: 468 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 527 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 23934 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 23875 Query: 528 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 587 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 23874 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 23815 Query: 588 t 588 | Sbjct: 23814 t 23814 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Minus Query: 232 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 291 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 24203 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 24144 Query: 292 atggccgtcggcaagtac 309 ||||| || ||||||||| Sbjct: 24143 atggcggtgggcaagtac 24126 Score = 71.9 bits (36), Expect = 4e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 664 agggaggaggaaatgcagaacatcaacaggcagacaaactcgaggatggggtggctgagt 723 ||||||||||| |||||| | | |||||| |||||||| ||||||| ||||| || Sbjct: 21276 agggaggaggagatgcaggaactgaacaggagaacaaactcaaggatggcttggcttggt 21217 Query: 724 ttcctctcgcttggcatctgcttgtccgtggcagggctgcagctgtggcatctgaagacc 783 ||| |||| || | |||||| |||| ||||| ||| ||||| ||||||||||||||| | Sbjct: 21216 ttcttctcactagctatctgcctgtcagtggcggggttgcagttgtggcatctgaagaac 21157 Query: 784 tttttcgagagaaagaagct 803 || || |||||||||||||| Sbjct: 21156 ttctttgagagaaagaagct 21137 Score = 67.9 bits (34), Expect = 6e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 601 gagctgaagaagctagaggataccatccaagctatccatgaagaaatgttttatctacgc 660 ||||| |||||||| |||||||| ||| | ||||||||||||||||||||||||| ||| Sbjct: 21423 gagctcaagaagctggaggatactatcaactctatccatgaagaaatgttttatcttcgc 21364 Query: 661 gaaagg 666 | |||| Sbjct: 21363 gcaagg 21358
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 184 bits (93), Expect = 4e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 348 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 407 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 14680076 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 14680017 Query: 408 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 467 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 14680016 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 14679957 Query: 468 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 527 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 14679956 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 14679897 Query: 528 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 587 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 14679896 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 14679837 Query: 588 t 588 | Sbjct: 14679836 t 14679836 Score = 83.8 bits (42), Expect = 1e-12 Identities = 69/78 (88%) Strand = Plus / Minus Query: 232 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 291 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 14680225 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 14680166 Query: 292 atggccgtcggcaagtac 309 ||||| || ||||||||| Sbjct: 14680165 atggcggtgggcaagtac 14680148 Score = 71.9 bits (36), Expect = 4e-09 Identities = 114/140 (81%) Strand = Plus / Minus Query: 664 agggaggaggaaatgcagaacatcaacaggcagacaaactcgaggatggggtggctgagt 723 ||||||||||| |||||| | | |||||| |||||||| ||||||| ||||| || Sbjct: 14677298 agggaggaggagatgcaggaactgaacaggagaacaaactcaaggatggcttggcttggt 14677239 Query: 724 ttcctctcgcttggcatctgcttgtccgtggcagggctgcagctgtggcatctgaagacc 783 ||| |||| || | |||||| |||| ||||| ||| ||||| ||||||||||||||| | Sbjct: 14677238 ttcttctcactagctatctgcctgtcagtggcggggttgcagttgtggcatctgaagaac 14677179 Query: 784 tttttcgagagaaagaagct 803 || || |||||||||||||| Sbjct: 14677178 ttctttgagagaaagaagct 14677159 Score = 67.9 bits (34), Expect = 6e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 601 gagctgaagaagctagaggataccatccaagctatccatgaagaaatgttttatctacgc 660 ||||| |||||||| |||||||| ||| | ||||||||||||||||||||||||| ||| Sbjct: 14677445 gagctcaagaagctggaggatactatcaactctatccatgaagaaatgttttatcttcgc 14677386 Query: 661 gaaagg 666 | |||| Sbjct: 14677385 gcaagg 14677380 Score = 50.1 bits (25), Expect = 0.015 Identities = 28/29 (96%) Strand = Plus / Plus Query: 754 gcagggctgcagctgtggcatctgaagac 782 ||||||||||||||||||||||| ||||| Sbjct: 11991161 gcagggctgcagctgtggcatctaaagac 11991189
>dbj|AK047800.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030045P07 product:katanin p80 (WD40-containing) subunit B 1, full insert sequence Length = 2104 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 aagcctctcccctcctcccccatcccatcc 50 |||||||||||||||||||||| ||||||| Sbjct: 925 aagcctctcccctcctcccccaccccatcc 954
>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence Length = 205702 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 21 aagcctctcccctcctcccccatcccatcc 50 |||||||||||||||||||||| ||||||| Sbjct: 132372 aagcctctcccctcctcccccaccccatcc 132401
>emb|CT982586.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 724 Score = 50.1 bits (25), Expect = 0.015 Identities = 55/65 (84%) Strand = Plus / Minus Query: 548 ccaaggactggtccaacgtcgccaagaagggcaaggtcgatatgatggaactagagctga 607 ||||||| |||||||| ||||||||||| ||| | |||||| ||||||| | || |||| Sbjct: 284 ccaaggattggtccaatgtcgccaagaaaggccaagtcgatgggatggaattggaactga 225 Query: 608 agaag 612 ||||| Sbjct: 224 agaag 220 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 776 tgaagacctttttcgagagaaagaa 800 |||||||||||||||||| |||||| Sbjct: 56 tgaagacctttttcgagaaaaagaa 32
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 50.1 bits (25), Expect = 0.015 Identities = 28/29 (96%) Strand = Plus / Plus Query: 754 gcagggctgcagctgtggcatctgaagac 782 ||||||||||||||||||||||| ||||| Sbjct: 14978 gcagggctgcagctgtggcatctaaagac 15006
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 50.1 bits (25), Expect = 0.015 Identities = 28/29 (96%) Strand = Plus / Plus Query: 754 gcagggctgcagctgtggcatctgaagac 782 ||||||||||||||||||||||| ||||| Sbjct: 95660 gcagggctgcagctgtggcatctaaagac 95688
>dbj|AP003390.1| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2523D13, complete sequences Length = 221091 Score = 48.1 bits (24), Expect = 0.058 Identities = 27/28 (96%) Strand = Plus / Minus Query: 753 ggcagggctgcagctgtggcatctgaag 780 |||||||| ||||||||||||||||||| Sbjct: 82393 ggcagggcagcagctgtggcatctgaag 82366
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cgatctccggccatggccgcgcg 134 ||||||||||||||||||||||| Sbjct: 5969589 cgatctccggccatggccgcgcg 5969611
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cgatctccggccatggccgcgcg 134 ||||||||||||||||||||||| Sbjct: 156699 cgatctccggccatggccgcgcg 156721
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cgatctccggccatggccgcgcg 134 ||||||||||||||||||||||| Sbjct: 20401 cgatctccggccatggccgcgcg 20423
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1114_D06 Length = 107621 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 cgatctccggccatggccgcgcg 134 ||||||||||||||||||||||| Sbjct: 62692 cgatctccggccatggccgcgcg 62714
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 28 tcccctcctcccccatcccatcc 50 ||||||||||||||||||||||| Sbjct: 101677 tcccctcctcccccatcccatcc 101699
>gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome 13, complete sequence Length = 237699 Score = 44.1 bits (22), Expect = 0.91 Identities = 22/22 (100%) Strand = Plus / Minus Query: 23 gcctctcccctcctcccccatc 44 |||||||||||||||||||||| Sbjct: 55446 gcctctcccctcctcccccatc 55425
>ref|NM_001063820.1| Oryza sativa (japonica cultivar-group) Os06g0247800 (Os06g0247800) mRNA, complete cds Length = 3306 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 43 cctcctcccccatcccatccc 63
>emb|CU012066.3| Wallaby DNA sequence from clone MEKBa-107A11, complete sequence Length = 159867 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ctcccctcctcccccatccca 47 ||||||||||||||||||||| Sbjct: 9157 ctcccctcctcccccatccca 9137
>gb|AC190146.1| Pongo pygmaeus abelii chromosome UNK clone CH276-46H12, complete sequence Length = 213511 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 agcctctcccctcctcccccatccc 46 |||||||||||| |||||||||||| Sbjct: 172 agcctctcccctgctcccccatccc 196
>gb|AC153163.2| Ornithorhynchus anatinus BAC clone OABb-434A1 from chromosome unknown, complete sequence Length = 156066 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 24 cctctcccctcctcccccatcccatccca 52 ||||||||| || |||||||||||||||| Sbjct: 27894 cctctcccccccccccccatcccatccca 27922
>ref|NM_113706.1| Arabidopsis thaliana unknown protein (AT3G27900) mRNA, complete cds Length = 735 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 600 agagctgaagaagctagagga 620 ||||||||||||||||||||| Sbjct: 501 agagctgaagaagctagagga 521
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cgtcgccgtacgggaacagca 403 ||||||||||||||||||||| Sbjct: 681301 cgtcgccgtacgggaacagca 681321
>gb|AY017844.1| Oryza sativa microsatellite MRG0169 containing (AG)X13, closest to marker RM121, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 22 cctcctcccccatcccatccc 2
>gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence Length = 175485 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 762 gcagctgtggcatctgaagac 782 ||||||||||||||||||||| Sbjct: 97386 gcagctgtggcatctgaagac 97406 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 762 gcagctgtggcatctgaagac 782 ||||||||||||||||||||| Sbjct: 98202 gcagctgtggcatctgaagac 98182
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 566 tcgccaagaagggcaaggtcgatat 590 |||||||||||| |||||||||||| Sbjct: 3959 tcgccaagaaggccaaggtcgatat 3983
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 cctcgccgtcggcgcgcgccc 229 ||||||||||||||||||||| Sbjct: 3154177 cctcgccgtcggcgcgcgccc 3154157
>dbj|AK143535.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970016H17 product:solute carrier family 12, member 7, full insert sequence Length = 3788 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 cgccgtcggcgcgcgccctcc 232 ||||||||||||||||||||| Sbjct: 113 cgccgtcggcgcgcgccctcc 93
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 7672594 cctcctcccccatcccatccc 7672614
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 agcctctcccctcctcccccatccc 46 |||||||||||| |||||||||||| Sbjct: 104258 agcctctcccctgctcccccatccc 104234
>gb|AC159625.2| Mus musculus BAC clone RP24-262L7 from chromosome 12, complete sequence Length = 189979 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 799 aagctgctgtagttttcccaa 819 ||||||||||||||||||||| Sbjct: 105802 aagctgctgtagttttcccaa 105782
>gb|AC069160.7|AC069160 Arabidopsis thaliana chromosome 1 BAC T9I1 genomic sequence, complete sequence Length = 99241 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 agagctgaagaagctagagga 620 ||||||||||||||||||||| Sbjct: 71966 agagctgaagaagctagagga 71946
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 95849 cctcctcccccatcccatccc 95869
>dbj|AP000371.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K16N12 Length = 58864 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 agagctgaagaagctagagga 620 ||||||||||||||||||||| Sbjct: 43298 agagctgaagaagctagagga 43278
>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete sequence Length = 229553 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 24 cctctcccctcctcccccatcccatccca 52 |||||||||||| | |||||||||||||| Sbjct: 151712 cctctcccctcccctcccatcccatccca 151684
>dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P03, full insert sequence Length = 3307 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 44 cctcctcccccatcccatccc 64
>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete sequences Length = 170973 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cctcctcccccatcccatccc 51 ||||||||||||||||||||| Sbjct: 69812 cctcctcccccatcccatccc 69832
>gb|AC161242.2| Mus musculus BAC clone RP24-200E4 from chromosome 12, complete sequence Length = 179665 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 799 aagctgctgtagttttcccaa 819 ||||||||||||||||||||| Sbjct: 23751 aagctgctgtagttttcccaa 23731
>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete sequence Length = 148047 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 24 cctctcccctcctcccccatcccatccca 52 |||||||||||| | |||||||||||||| Sbjct: 79588 cctctcccctcccctcccatcccatccca 79616 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 138,350,076 Number of extensions: 8124503 Number of successful extensions: 172511 Number of sequences better than 10.0: 45 Number of HSP's gapped: 172486 Number of HSP's successfully gapped: 67 Length of query: 956 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 933 Effective length of database: 18,503,978,556 Effective search space: 17264211992748 Effective search space used: 17264211992748 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
