ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf115n09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100664:Os10g0188100 | 33 | 0.46 | 2 | AK068892:Os07g0563800 | 30 | 0.52 | 3 | AK067125:Os07g0563800 | 30 | 0.52 | 4 | AK067240:Os07g0563800 | 30 | 0.53 | 5 | AK059690:Os07g0563800 | 30 | 0.53 | 6 | AK109979: | 32 | 0.78 | 7 | AK064916:Os07g0529600 | 32 | 1.0 | 8 | AK106746:Os10g0481100 | 32 | 1.3 | 9 | AK071715:Os03g0735300 | 31 | 2.3 | 10 | AK064292:Os11g0184900 | 31 | 2.3 | 11 | AK059602:Os03g0735300 | 31 | 2.3 | 12 | Os12g0607400:Os12g0607400 | 30 | 3.0 | 13 | AK066464:Os03g0355300 | 30 | 3.8 | 14 | AK061568:Os02g0635800 | 30 | 3.8 | 15 | AK119937: | 30 | 3.9 | 16 | AK071077:Os05g0498900 | 30 | 5.0 | 17 | AK071025:Os03g0355100 | 30 | 5.0 | 18 | AK060982:Os03g0355100 | 30 | 5.0 | 19 | Os01g0607600:Os01g0607600 | 30 | 5.0 | 20 | AK109913:Os10g0146200 | 29 | 6.6 | 21 | Os10g0462700:Os10g0462700 | 29 | 6.6 | 22 | AK106218:Os04g0423400 | 29 | 6.6 | 23 | AK099691:Os01g0951900 | 29 | 6.6 | 24 | Os04g0112100:Os04g0112100 | 29 | 8.6 |
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>AK100664:Os10g0188100 | Length = 529 Score = 33.1 bits (74), Expect = 0.46 Identities = 20/80 (25%), Positives = 37/80 (46%) Frame = -2 Query: 672 PRVPAKRRGEKETENQREEKHGVKRDGGDLVGLSGDPPARREGDVACTVKEHGVEDEHFE 493 P +PA K+ + + EE+ G+ + G +L L G E D ++ EDE Sbjct: 313 PEIPAPPE-IKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDDEDDDQEDESSP 371 Query: 492 VVTGEMQERMVRSPTDPAPS 433 V+ + +++ P D +P+ Sbjct: 372 VLAPKQKDQPKDEPVDNSPA 391
>AK068892:Os07g0563800 | Length = 476 Score = 30.0 bits (66), Expect(2) = 0.52 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 1033 PAAASKYA-VQARTHARPHQARTPQQARKQPSRTHIISPQQTSEPEDQTP 887 PAA SK A V +RT P QA P Q + QPS + PQ P + TP Sbjct: 165 PAAVSKIAPVVSRT---PTQA--PHQPKAQPSVPKVSPPQPEKSPPNATP 209 Score = 21.6 bits (44), Expect(2) = 0.52 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 1115 TSLPSTSRNISRSATNQS*YNRGQHPVPSS 1026 +S PS+ +S+ +Q+ NRG H SS Sbjct: 128 SSRPSSGARDEKSSESQTSVNRGGHNQRSS 157
>AK067125:Os07g0563800 | Length = 476 Score = 30.0 bits (66), Expect(2) = 0.52 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 1033 PAAASKYA-VQARTHARPHQARTPQQARKQPSRTHIISPQQTSEPEDQTP 887 PAA SK A V +RT P QA P Q + QPS + PQ P + TP Sbjct: 165 PAAVSKIAPVVSRT---PTQA--PHQPKAQPSVPKVSPPQPEKSPPNATP 209 Score = 21.6 bits (44), Expect(2) = 0.52 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 1115 TSLPSTSRNISRSATNQS*YNRGQHPVPSS 1026 +S PS+ +S+ +Q+ NRG H SS Sbjct: 128 SSRPSSGARDEKSSESQTSVNRGGHNQRSS 157
>AK067240:Os07g0563800 | Length = 391 Score = 30.0 bits (66), Expect(2) = 0.53 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 1033 PAAASKYA-VQARTHARPHQARTPQQARKQPSRTHIISPQQTSEPEDQTP 887 PAA SK A V +RT P QA P Q + QPS + PQ P + TP Sbjct: 165 PAAVSKIAPVVSRT---PTQA--PHQPKAQPSVPKVSPPQPEKSPPNATP 209 Score = 21.6 bits (44), Expect(2) = 0.53 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 1115 TSLPSTSRNISRSATNQS*YNRGQHPVPSS 1026 +S PS+ +S+ +Q+ NRG H SS Sbjct: 128 SSRPSSGARDEKSSESQTSVNRGGHNQRSS 157
>AK059690:Os07g0563800 | Length = 370 Score = 30.0 bits (66), Expect(2) = 0.53 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -1 Query: 1033 PAAASKYA-VQARTHARPHQARTPQQARKQPSRTHIISPQQTSEPEDQTP 887 PAA SK A V +RT P QA P Q + QPS + PQ P + TP Sbjct: 59 PAAVSKIAPVVSRT---PTQA--PHQPKAQPSVPKVSPPQPEKSPPNATP 103 Score = 21.6 bits (44), Expect(2) = 0.53 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 1115 TSLPSTSRNISRSATNQS*YNRGQHPVPSS 1026 +S PS+ +S+ +Q+ NRG H SS Sbjct: 22 SSRPSSGARDEKSSESQTSVNRGGHNQRSS 51
>AK109979: | Length = 934 Score = 32.3 bits (72), Expect = 0.78 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = -2 Query: 1095 PQHQQVSNKSELIQQRPAPSAQQQLANTQSKHERTHAH--TKHERRSKHANSH 943 P HQQ + +L QQ QQQL + Q + ++ H H+++ H + H Sbjct: 56 PSHQQQLQQHQLQQQHHQHQMQQQLQHQQQQQQQHQQHLAQHHQQQPNHPHQH 108
>AK064916:Os07g0529600 | Length = 402 Score = 32.0 bits (71), Expect = 1.0 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Frame = -2 Query: 1101 H*PQHQQVSNKSELIQQRPAPSAQQQLANTQSKHER---THAHTKHERRSKHANSHH--A 937 H PQ V EL++ R A + A +H+R HA +HE R H Sbjct: 237 HGPQRDGVQGGGELLRPRRAVRRHGRQAAAGHRHDRRRARHARPRHEHRRGRDRPPHPRG 296 Query: 936 RT*SARSKPASRRTRHQPKD 877 R R + RR R +P++ Sbjct: 297 RPRHDRHRHGGRRDRRRPEN 316
>AK106746:Os10g0481100 | Length = 290 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = -3 Query: 770 ATAVVATPRSTRAVVPESSIQFRLG--GDR-KSAGDRGFLRSGGEKRKP 633 A AVVA PR R V ++++ R G GDR ++A RG R G +R+P Sbjct: 33 AAAVVAVPRGDRRVRGDAAVPVRDGGHGDRAQAAPGRGRRRRGVRRRRP 81
>AK071715:Os03g0735300 | Length = 296 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Frame = -1 Query: 652 EGRKGNRKSTGGKTRGEAGWR*SG-WPQRGSAREKRRGCCLHGEG 521 +GR GN + GG RG G R G W RG R G G G Sbjct: 235 QGRYGNYQENGGYNRGRGGMRGRGNWNYRGGYERGRGGGFPGGRG 279
>AK064292:Os11g0184900 | Length = 127 Score = 30.8 bits (68), Expect = 2.3 Identities = 21/60 (35%), Positives = 25/60 (41%) Frame = -1 Query: 694 GTERVLGTEGSCEAEGRKGNRKSTGGKTRGEAGWR*SGWPQRGSAREKRRGCCLHGEGAR 515 GT GT + GR G R G+ RG R S W +RG R +RR G R Sbjct: 25 GTSSRRGTGSTRTGSGRTGRRGRGTGRRRG----RTSRWGRRGRWRSRRRSSSTPGSRPR 80
>AK059602:Os03g0735300 | Length = 198 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Frame = -1 Query: 652 EGRKGNRKSTGGKTRGEAGWR*SG-WPQRGSAREKRRGCCLHGEG 521 +GR GN + GG RG G R G W RG R G G G Sbjct: 137 QGRYGNYQENGGYNRGRGGMRGRGNWNYRGGYERGRGGGFPGGRG 181
>Os12g0607400:Os12g0607400 | Length = 322 Score = 30.4 bits (67), Expect = 3.0 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -2 Query: 999 ERTHAHTKHERRSKHANSHHART*SARSKPASRRTRHQPKDSRD 868 ER H H + E R +H S H + R AS R R D+ D Sbjct: 129 ERCHRHPRREARRRHLASQHTDSLPNRWPQASVRVRAPEPDNHD 172
>AK066464:Os03g0355300 | Length = 475 Score = 30.0 bits (66), Expect = 3.8 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Frame = +3 Query: 855 VPIPSLCYLSAGVWSSGSLVCCGLIMCVRDGC---LRACC-----GVRAWCGRACVRAWT 1010 +P+P C+L G L C + CV DGC ++ C A G + WT Sbjct: 289 IPLPVECHLKISFAMRGDLQLCRTMSCV-DGCGDSIKFVCISDGGSSSAHTGDRAITMWT 347 Query: 1011 AYLLAAAGHWV 1043 L A G W+ Sbjct: 348 --LTLATGEWL 356
>AK061568:Os02g0635800 | Length = 211 Score = 30.0 bits (66), Expect = 3.8 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = -3 Query: 812 DSEASSDVRDGIHAATAVVATPRSTRAVVPESSIQFRLGGDRKSAGDRGFLRSGGEKRKP 633 D+ A+ V + TA VA + A E+ Q +K+AG +GG+ R Sbjct: 5 DAAATFHVYQPVQIPTATVAPAAAVSAAPAEAVAQLVPAPSKKAAG-----AAGGKDRHS 59 Query: 632 KINGR 618 K+NGR Sbjct: 60 KVNGR 64
>AK119937: | Length = 236 Score = 30.0 bits (66), Expect = 3.9 Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 8/67 (11%) Frame = -1 Query: 676 GTEGSCEAEGRK---GNRK---STGGKTRGEAGWR-*SGWPQRGSAREKR-RGCCLHGEG 521 G EG+ E E K G R+ + GG RG G R SG RG R +R RG H G Sbjct: 23 GEEGTSETEDGKAGGGGREGGGAVGGAARGLGGGRAGSGSRARGGGRRRRGRGSRAHARG 82 Query: 520 ARC*GRA 500 GRA Sbjct: 83 GGRGGRA 89
>AK071077:Os05g0498900 | Length = 484 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 888 GVWSSGSLVCCGLIMCVRDGCLRACCGVRAWCG 986 G+ SS S CC VR GC C +R +CG Sbjct: 2 GLLSSASRSCC-CCSWVRGGCASCCSWIRGFCG 33
>AK071025:Os03g0355100 | Length = 472 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Frame = +3 Query: 855 VPIPSLCYLSAGVWSSGSLVCCGLIMCVRDG-------CLRACCGVRAWCGRACVRAWTA 1013 +P+P C+L+ G L C + CV G C+ A G + WT Sbjct: 286 IPLPVECHLNISFAMRGDLQLCRTMSCVDGGGDSIKFVCISDGGSSSAHTGDRAITMWT- 344 Query: 1014 YLLAAAGHWV 1043 L A G W+ Sbjct: 345 -LTLATGEWL 353
>AK060982:Os03g0355100 | Length = 472 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 7/70 (10%) Frame = +3 Query: 855 VPIPSLCYLSAGVWSSGSLVCCGLIMCVRDG-------CLRACCGVRAWCGRACVRAWTA 1013 +P+P C+L+ G L C + CV G C+ A G + WT Sbjct: 286 IPLPVECHLNISFAMRGDLQLCRTMSCVDGGGDSIKFVCISDGGSSSAHTGDRAITMWT- 344 Query: 1014 YLLAAAGHWV 1043 L A G W+ Sbjct: 345 -LTLATGEWL 353
>Os01g0607600:Os01g0607600 | Length = 744 Score = 29.6 bits (65), Expect = 5.0 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = -2 Query: 1125 QCQYFTPKH*PQHQQVSNKSELIQQRPAPSAQQQLANTQSKHERTHAHTKH 973 Q QY +H QHQQ+ +++ QR A QQQ Q + ++ H H Sbjct: 82 QQQYHHQQH--QHQQIQ-MQQMLLQRAAQQQQQQQQQQQQQQQQLHRDGSH 129
>AK109913:Os10g0146200 | Length = 370 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = -3 Query: 770 ATAVVATPRSTRAVVPESSIQFRLGGDRKSAGDRGFLRSGGE 645 ATA + VP++S+ +GGD G+ G + SG E Sbjct: 289 ATATTMPGTTFTDAVPDTSMPMPMGGDAGGGGEEGVVLSGSE 330
>Os10g0462700:Os10g0462700 | Length = 211 Score = 29.3 bits (64), Expect = 6.6 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = -1 Query: 646 RKGNRKSTGGKTRGEAGW--R*SGWPQRGSAREKRRGCCL--HGEGARC*GRAL*SSYRR 479 RKG R+ GG+ + G R W +R A +R GC GEG R GRA + R Sbjct: 112 RKGRRRLGGGRRLQKEGAARRLGPWLRRKGA--EREGCRRWGEGEGERRRGRASPAVEMR 169 Query: 478 DAGED 464 GED Sbjct: 170 SGGED 174
>AK106218:Os04g0423400 | Length = 240 Score = 29.3 bits (64), Expect = 6.6 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = -1 Query: 1096 AATSAGQQQIR--VDTTEASTQCPAAAS-KYAVQARTHARPHQARTPQQARKQPSRTHII 926 AAT+ GQ R T+ A+T AAA+ K T RP R R++ +RT Sbjct: 91 AATTTGQGLTRSTAATSPATTSTAAAAAPKPTRSTSTGCRPGTTRRSTGRRRRSTRTRSA 150 Query: 925 SPQQTSEPEDQTPAER 878 S + P +P R Sbjct: 151 SARWAPSPPAPSPCTR 166
>AK099691:Os01g0951900 | Length = 221 Score = 29.3 bits (64), Expect = 6.6 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Frame = -2 Query: 666 VPAKRRGEKETENQR---EEKHGVKRDGGDLVGLSGDPPARREGDVACTVKEHGVEDEHF 496 V +R G++ +R EE+ G G+L GD RR V V E EDEH Sbjct: 25 VDLERPGQRVRRQRRRGAEERGGDGLRPGELAVQGGDGERRRVAVVLLEVDEPPREDEHL 84 Query: 495 EVVTGEMQE 469 + G +E Sbjct: 85 PLADGAGEE 93
>Os04g0112100:Os04g0112100 | Length = 446 Score = 28.9 bits (63), Expect = 8.6 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Frame = -1 Query: 790 SATESTQRRRW*QRPGALVLSYLNPRSNLDSVGTERVLGTEGSCEAEGRKGN-RKSTGG 617 +A + +R RW +RPGA D VG GT G CE + R R S GG Sbjct: 40 AAVATARRGRWHRRPGATWAG--------DGVGQ----GTGGGCEGQARAAKARPSAGG 86 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 36,911,190 Number of extensions: 825545 Number of successful extensions: 3212 Number of sequences better than 10.0: 24 Number of HSP's gapped: 3183 Number of HSP's successfully gapped: 28 Length of query: 443 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 339 Effective length of database: 11,235,591 Effective search space: 3808865349 Effective search space used: 3808865349 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
