ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf112l04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829749.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039I21, full insert sequence Length = 1730 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Plus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 380 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 439 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 440 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 499 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 500 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 559 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 560 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 611 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 646 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 705 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 706 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 765 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 766 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 825 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 826 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 885 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 886 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 945 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 946 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 1004 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 1005 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 1054 Score = 131 bits (66), Expect = 9e-27 Identities = 122/138 (88%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| ||||||||||||||||||||||||| |||||||| ||||||| ||||||| Sbjct: 214 tgtagcgctttcctttggattgcagagaattt-caaacaaaaccaacaaacctttgcatc 272 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | || || ||||||| Sbjct: 273 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccgtgtcatacgagcg 332 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 333 ccgccggtctcgtgtttc 350
>emb|CT829748.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA046P21, full insert sequence Length = 1547 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Plus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 264 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 323 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 324 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 383 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 384 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 443 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 444 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 495 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 530 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 589 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 590 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 649 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 650 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 709 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 710 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 769 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 770 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 829 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 830 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 888 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 889 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 938
>ref|NM_001050092.1| Oryza sativa (japonica cultivar-group) Os01g0612600 (Os01g0612600) mRNA, complete cds Length = 2396 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Plus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 1088 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 1147 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 1148 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 1207 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 1208 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 1267 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 1268 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 1319 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 1354 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 1413 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 1414 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 1473 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 1474 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 1533 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 1534 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 1593 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 1594 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 1653 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 1654 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 1712 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 1713 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 1762 Score = 123 bits (62), Expect = 2e-24 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 922 tgtagcgctttcctttggattgcggagaattt-caaacaaaaccaacaaacctttgcatc 980 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | || || ||||||| Sbjct: 981 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccgtgtcatacgagcg 1040 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 1041 ccgccggtctcgtgtttc 1058
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Minus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 24280330 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 24280271 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 24280270 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 24280211 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 24280210 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 24280151 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 24280150 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 24280099 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Minus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 24280064 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 24280005 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 24280004 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 24279945 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 24279944 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 24279885 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 24279884 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 24279825 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 24279824 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 24279765 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 24279764 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 24279706 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 24279705 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 24279656 Score = 123 bits (62), Expect = 2e-24 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 24280496 tgtagcgctttcctttggattgcggagaattt-caaacaaaaccaacaaacctttgcatc 24280438 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | || || ||||||| Sbjct: 24280437 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccgtgtcatacgagcg 24280378 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 24280377 ccgccggtctcgtgtttc 24280360
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Minus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 104894 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 104835 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 104834 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 104775 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 104774 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 104715 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 104714 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 104663 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Minus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 104628 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 104569 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 104568 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 104509 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 104508 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 104449 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 104448 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 104389 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 104388 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 104329 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 104328 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 104270 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 104269 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 104220 Score = 123 bits (62), Expect = 2e-24 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 105060 tgtagcgctttcctttggattgcggagaattt-caaacaaaaccaacaaacctttgcatc 105002 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | || || ||||||| Sbjct: 105001 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccgtgtcatacgagcg 104942 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 104941 ccgccggtctcgtgtttc 104924
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Minus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 26234 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 26175 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 26174 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 26115 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 26114 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 26055 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 26054 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 26003 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Minus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 25968 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 25909 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 25908 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 25849 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 25848 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 25789 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 25788 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 25729 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 25728 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 25669 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 25668 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 25610 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 25609 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 25560 Score = 123 bits (62), Expect = 2e-24 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 26400 tgtagcgctttcctttggattgcggagaattt-caaacaaaaccaacaaacctttgcatc 26342 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | || || ||||||| Sbjct: 26341 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccgtgtcatacgagcg 26282 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 26281 ccgccggtctcgtgtttc 26264
>dbj|AK066561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D14, full insert sequence Length = 2396 Score = 222 bits (112), Expect = 3e-54 Identities = 202/232 (87%) Strand = Plus / Plus Query: 359 ctcgcaggtcagaggaggctgctgccgttgccgccgctgcagcagcaaagcaggctgcag 418 ||||||||||||||||| ||||||| | |||||| || || || || ||||||||||| | Sbjct: 1089 ctcgcaggtcagaggagtctgctgctgctgccgctgccgctgccgcgaagcaggctgcgg 1148 Query: 419 aatgggaggaggttcgctgccctgtgtgcatggaccaccctcacaatgctgttatgcttg 478 |||||||||| || |||||||| || |||||||| ||||| ||||| |||||| |||| | Sbjct: 1149 aatgggaggatgtccgctgcccggtctgcatggatcacccacacaacgctgttctgctcg 1208 Query: 479 tctgctcgtcacatgagaaaggctgccgcccattcatttgcgacacaagctacagacact 538 |||||||||| |||||||| ||||||||||| ||||| ||||||||||||||| |||||| Sbjct: 1209 tctgctcgtcgcatgagaagggctgccgccctttcatgtgcgacacaagctaccgacact 1268 Query: 539 ccaattgcctcgatcagttccgcaaagcctccaaggagtcatctaaggattc 590 |||||||| | ||||||| |||||| ||||| |||||||| || |||||||| Sbjct: 1269 ccaattgctttgatcagtaccgcaaggcctctaaggagtcctcaaaggattc 1320 Score = 163 bits (82), Expect = 2e-36 Identities = 330/410 (80%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 610 gagtgccagcagccagttaaactggcatgtccattatgtcgtgggccggtcagccattgg 669 |||||||||||||| | |||||| | || || || ||||||||||| |||||||||||| Sbjct: 1355 gagtgccagcagcccataaaactgtcttgcccgttgtgtcgtgggccagtcagccattgg 1414 Query: 670 accaaggattatgatgcacggaagttcatgaattctaaggttcgagcatgcaccatggag 729 || |||||||||||||||||||||| | |||| |||||||||||||| || | ||| Sbjct: 1415 acaaaggattatgatgcacggaagtacttgaacgtgaaggttcgagcatgtactaaagag 1474 Query: 730 tcatgtgagttcaagggtgcgtacaaccagctgaggatgcacgccagggaggatcatcct 789 || || ||||||| ||| || ||| || ||||||| |||||||||||| | |||||| Sbjct: 1475 tcctgcgagttcaggggggcatacggtcaactgaggagacacgccagggagaaccatcct 1534 Query: 790 gctatacgaccaacagaggtggaccccaatcgacagcaagactggcataggatggagcag 849 || | ||||||| ||||||| || | || |||| ||||||||| || ||||||||| Sbjct: 1535 actgttagaccaactcaggtggatcctgaacggcagcgagactggcacagaatggagcag 1594 Query: 850 cagcgtgatcttggagatttgttcagcatgctgcgttcgggaatcagtggcagagatgat 909 |||||||||||||| || |||||||||||||| ||||| || | |||| ||| || || Sbjct: 1595 cagcgtgatcttggggacttgttcagcatgcttcgttcaggcttaagtgccagggaggac 1654 Query: 910 ggggttggagccagtgaaggtgaagacggcatcagtgagagatccttac-tcgccacgtc 968 ||| | |||| ||||||||| ||||| | ||||| ||||| | ||| | ||| | || Sbjct: 1655 gggatcggagtcagtgaaggggaagaggatatcagcgagagggctctacatagcc-catc 1713 Query: 969 cataacaatggtcttcattgtgcggtcaggcaggtccatcctccactaca 1018 ||||||||||||||||||||||| | |||||||| || |||||||||| Sbjct: 1714 tataacaatggtcttcattgtgcgcactggcaggtcgatactccactaca 1763 Score = 115 bits (58), Expect = 5e-22 Identities = 120/138 (86%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 199 tgtagccctttcctttggattgcagagaattttcaaacaaa-ccaacaacaacttgcatc 257 |||||| |||||||||||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 923 tgtagcgctttcctttggattgcggagaattt-caaacaaaaccaacaaacctttgcatc 981 Query: 258 tgactgacttgaggtagctatgccaaaggacaggagctcccgttcagtctcgcacgagcg 317 |||||||||||||||| |||||||||||||||||||| ||||| | | || ||||||| Sbjct: 982 tgactgacttgaggtaactatgccaaaggacaggagcacccgtgccatgtcatacgagcg 1041 Query: 318 ctgccgatctcgtgtttc 335 | |||| ||||||||||| Sbjct: 1042 ccgccggtctcgtgtttc 1059
>gb|BT018478.1| Zea mays clone EL01N0424A03.d mRNA sequence Length = 1526 Score = 129 bits (65), Expect = 3e-26 Identities = 116/133 (87%) Strand = Plus / Plus Query: 397 gcagcagcaaagcaggctgcagaatgggaggaggttcgctgccctgtgtgcatggaccac 456 |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 376 gcagcagcaaagcaagctgcagagtgggaggatgttcggtgcccggtgtgcatggaccac 435 Query: 457 cctcacaatgctgttatgcttgtctgctcgtcacatgagaaaggctgccgcccattcatt 516 || ||||| || || |||| |||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 436 ccgcacaacgccgtcctgctggtctgctcctcacacgagaagggctgccgccccttcatg 495 Query: 517 tgcgacacaagct 529 |||||||| |||| Sbjct: 496 tgcgacaccagct 508 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ctatgccaaaggacaggagctcccg 299 ||||||| ||||||||||||||||| Sbjct: 239 ctatgccgaaggacaggagctcccg 263 Score = 42.1 bits (21), Expect = 6.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 839 ggatggagcagcagcgtgatcttggagatttgttcagcatgctgcgttc 887 ||||||||||||| || || ||||| || ||| | |||||||||||||| Sbjct: 803 ggatggagcagcaacgggaccttggggacttgatgagcatgctgcgttc 851
>gb|DQ244574.1| Zea mays clone 9303 mRNA sequence Length = 1360 Score = 123 bits (62), Expect = 2e-24 Identities = 113/130 (86%) Strand = Plus / Plus Query: 400 gcagcaaagcaggctgcagaatgggaggaggttcgctgccctgtgtgcatggaccaccct 459 ||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 192 gcagcaaagcaagctgcagagtgggaggacgttcggtgcccggtgtgcatggaccacccg 251 Query: 460 cacaatgctgttatgcttgtctgctcgtcacatgagaaaggctgccgcccattcatttgc 519 ||||| || || |||| |||||||| ||||| ||||| ||||||||||| ||||| ||| Sbjct: 252 cacaacgccgtcctgctggtctgctcctcacacgagaagggctgccgccccttcatgtgc 311 Query: 520 gacacaagct 529 ||||| |||| Sbjct: 312 gacaccagct 321 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Plus Query: 839 ggatggagcagcagcgtgatcttggagatttgttcagcatgctgcgttc 887 ||||||||||||| || || |||||||| ||| | |||||||||||||| Sbjct: 616 ggatggagcagcaacgggaccttggagacttgatgagcatgctgcgttc 664 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ctatgccaaaggacaggagctcccg 299 ||||||| ||||||||||||||||| Sbjct: 52 ctatgccgaaggacaggagctcccg 76
>gb|BT018061.1| Zea mays clone EL01N0532F07.c mRNA sequence Length = 1298 Score = 117 bits (59), Expect = 1e-22 Identities = 161/195 (82%) Strand = Plus / Plus Query: 400 gcagcaaagcaggctgcagaatgggaggaggttcgctgccctgtgtgcatggaccaccct 459 ||||| ||||| |||||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 219 gcagcgaagcaagctgcagagtgggaggatgttcggtgctcggtctgcatggaccacccg 278 Query: 460 cacaatgctgttatgcttgtctgctcgtcacatgagaaaggctgccgcccattcatttgc 519 ||||| ||||| |||| ||||||||||| || ||||| ||||||||||| ||||| ||| Sbjct: 279 cacaacgctgtcctgctggtctgctcgtcgcacgagaagggctgccgccccttcatgtgc 338 Query: 520 gacacaagctacagacactccaattgcctcgatcagttccgcaaagcctccaaggagtca 579 ||||| |||| | |||||||||||| || |||| ||| || || |||||||| || Sbjct: 339 gacaccagctcgcggcactccaattgctatgaccagtaccggaaggcgtccaaggactcc 398 Query: 580 tctaaggattcaggg 594 || |||||||||||| Sbjct: 399 tccaaggattcaggg 413 Score = 67.9 bits (34), Expect = 1e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 250 cttgcatctgactgacttgaggtagctatgccaaaggacaggagctcccg 299 ||||||||| ||||||||||| || ||||||| ||||||||||||||||| Sbjct: 63 cttgcatctcactgacttgagataactatgcctaaggacaggagctcccg 112 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 839 ggatggagcagcagcgtgatcttggagatttgttcagcatgctgcgttc 887 |||||||||||||||| || |||||||| ||| | |||||||||||||| Sbjct: 655 ggatggagcagcagcgggaccttggagacttgatgagcatgctgcgttc 703
>gb|AY111912.1| Zea mays CL24558_1 mRNA sequence Length = 657 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 839 ggatggagcagcagcgtgatcttggagatttgttcagcatgctgcgttc 887 |||||||||||||||| || |||||||| ||| | |||||||||||||| Sbjct: 621 ggatggagcagcagcgggaccttggagacttgatgagcatgctgcgttc 573
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 445 tgcatggaccaccctcacaatgctgttatgcttgtctgctcgtcacatgagaaaggctgc 504 |||||||| |||||||||||||| ||| | ||| | || || || |||||||| || ||| Sbjct: 97300 tgcatggagcaccctcacaatgcagttctccttatatgttcatcccatgagaagggatgc 97241 Query: 505 cgcccattcatttgcgacacaagctacagacactccaattgcctcgatcagttccgcaa 563 ||||||| ||| ||| |||| ||||| | ||||| || || || ||||||||| |||| Sbjct: 97240 cgcccatacatgtgcaacactagctatcgccactcaaactgtctggatcagttctgcaa 97182
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2924864 gctgctgccgctgccgccgctgcagcagc 2924892
>gb|AC008225.4| Drosophila melanogaster clone BACR03E11, complete sequence Length = 174123 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 113761 gctgctgccgctgccgccgctgcagcagc 113733
>gb|AC095016.2| Drosophila melanogaster clone BACR03K19, complete sequence Length = 165743 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 32528 gctgctgccgctgccgccgctgcagcagc 32500
>ref|NM_169172.1| Drosophila melanogaster Alhambra CG1070-RB, transcript variant B (Alh), mRNA Length = 3891 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2581 gctgctgccgctgccgccgctgcagcagc 2553
>ref|NM_169171.1| Drosophila melanogaster Alhambra CG1070-RD, transcript variant D (Alh), mRNA Length = 4838 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3528 gctgctgccgctgccgccgctgcagcagc 3500
>ref|NM_169170.1| Drosophila melanogaster Alhambra CG1070-RC, transcript variant C (Alh), mRNA Length = 5251 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2581 gctgctgccgctgccgccgctgcagcagc 2553
>ref|NM_079526.2| Drosophila melanogaster Alhambra CG1070-RA, transcript variant A (Alh), mRNA Length = 5021 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3711 gctgctgccgctgccgccgctgcagcagc 3683
>gb|BT009944.1| Drosophila melanogaster SD04152 full insert cDNA Length = 5002 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3687 gctgctgccgctgccgccgctgcagcagc 3659
>gb|AF281146.1| Drosophila melanogaster AF10 mRNA, complete cds, alternatively spliced Length = 2478 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 1811 gctgctgccgctgccgccgctgcagcagc 1783
>gb|AF281145.1| Drosophila melanogaster AF10 mRNA, complete cds, alternatively spliced Length = 4999 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3711 gctgctgccgctgccgccgctgcagcagc 3683
>gb|AY069737.1| Drosophila melanogaster LP05501 full length cDNA Length = 4651 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2389 gctgctgccgctgccgccgctgcagcagc 2361
>gb|AY051905.1| Drosophila melanogaster LD39491 full length cDNA Length = 3860 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2551 gctgctgccgctgccgccgctgcagcagc 2523
>gb|AY036105.1| Drosophila melanogaster zinc finger/leucine zipper protein DALF isoform C3 (Alhambra) mRNA, complete cds Length = 4817 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3525 gctgctgccgctgccgccgctgcagcagc 3497
>gb|AY036104.1| Drosophila melanogaster zinc finger/leucine zipper protein DALF isoform C1 (Alhambra) mRNA, complete cds Length = 5248 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 2581 gctgctgccgctgccgccgctgcagcagc 2553
>gb|AF217960.1|AF217960 Drosophila melanogaster Alhambra (Alhambra) mRNA, complete cds Length = 4998 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 3684 gctgctgccgctgccgccgctgcagcagc 3656
>gb|AY105880.1| Zea mays PCO080164 mRNA sequence Length = 705 Score = 50.1 bits (25), Expect = 0.025 Identities = 43/49 (87%) Strand = Plus / Plus Query: 839 ggatggagcagcagcgtgatcttggagatttgttcagcatgctgcgttc 887 ||||||||||||| || || |||||||| ||| | |||||||||||||| Sbjct: 308 ggatggagcagcaacgggaccttggagacttgatgagcatgctgcgttc 356
>gb|AC004266.1|AC004266 Drosophila melanogaster DNA sequence (P1 DS00464 (D115)), complete sequence Length = 72847 Score = 50.1 bits (25), Expect = 0.025 Identities = 28/29 (96%) Strand = Plus / Plus Query: 376 gctgctgccgttgccgccgctgcagcagc 404 |||||||||| |||||||||||||||||| Sbjct: 58599 gctgctgccgctgccgccgctgcagcagc 58627
>emb|CT990571.1| Wallaby DNA sequence from clone MEKBa-465N20, complete sequence Length = 182375 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 110305 tcctttcccttcccctcctcccct 110282
>gb|BC062542.1| Homo sapiens cDNA clone IMAGE:5923188, partial cds Length = 3776 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 3386 tcctttcccttcccctcctcccct 3409
>gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome 1, complete sequence Length = 197135 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 18 ctcctttcccttcccctcctcccc 41 |||||||||||||||||||||||| Sbjct: 38835 ctcctttcccttcccctcctcccc 38858
>gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, complete sequence Length = 180484 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 47177 tcctttcccttcccctcctcccct 47200
>gb|AC026746.6| Homo sapiens chromosome 5 clone RP11-2O17, complete sequence Length = 179144 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 166620 tcctttcccttcccctcctcccct 166597
>gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D9, complete sequence Length = 157492 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 146200 tcctttcccttcccctcctcccct 146223
>emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chromosome 2, complete sequence Length = 221009 Score = 48.1 bits (24), Expect = 0.100 Identities = 27/28 (96%) Strand = Plus / Minus Query: 11 tttctttctcctttcccttcccctcctc 38 ||||||||||||||||| |||||||||| Sbjct: 139505 tttctttctcctttcccctcccctcctc 139478
>emb|AL607084.14| Mouse DNA sequence from clone RP23-272N19 on chromosome 4, complete sequence Length = 113877 Score = 48.1 bits (24), Expect = 0.100 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 tcctttcccttcccctcctcccct 42 |||||||||||||||||||||||| Sbjct: 28003 tcctttcccttcccctcctcccct 28026
>gb|AC115691.8| Mus musculus chromosome 18, clone RP24-286B14, complete sequence Length = 175016 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 tcaaacaaaccaacaacaacttg 253 ||||||||||||||||||||||| Sbjct: 72075 tcaaacaaaccaacaacaacttg 72053
>gb|AC153010.3| Mus musculus BAC clone RP23-325H1 from chromosome 15, complete sequence Length = 230097 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 ctttctcctttcccttcccctcc 36 ||||||||||||||||||||||| Sbjct: 114018 ctttctcctttcccttcccctcc 113996
>gb|AC125157.4| Mus musculus BAC clone RP24-390G17 from chromosome 18, complete sequence Length = 207265 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 tcaaacaaaccaacaacaacttg 253 ||||||||||||||||||||||| Sbjct: 124943 tcaaacaaaccaacaacaacttg 124921
>gb|AC124455.6| Mus musculus BAC clone RP24-129J9 from chromosome 15, complete sequence Length = 167059 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 ctttctcctttcccttcccctcc 36 ||||||||||||||||||||||| Sbjct: 3568 ctttctcctttcccttcccctcc 3590
>gb|AC134860.4| Mus musculus BAC clone RP23-388A16 from chromosome 13, complete sequence Length = 206634 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 16 ttctcctttcccttcccctcctc 38 ||||||||||||||||||||||| Sbjct: 147019 ttctcctttcccttcccctcctc 146997
>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete sequence Length = 144474 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 tttctcctttcccttcccctcct 37 ||||||||||||||||||||||| Sbjct: 36913 tttctcctttcccttcccctcct 36935
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 tttctcctttcccttcccctcct 37 ||||||||||||||||||||||| Sbjct: 193669 tttctcctttcccttcccctcct 193647
>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 Length = 340000 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 tttctcctttcccttcccctcct 37 ||||||||||||||||||||||| Sbjct: 5408 tttctcctttcccttcccctcct 5430
>emb|AL807401.11| Mouse DNA sequence from clone RP23-133C12 on chromosome X, complete sequence Length = 110261 Score = 46.1 bits (23), Expect = 0.39 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 tttctcctttcccttcccctcct 37 ||||||||||||||||||||||| Sbjct: 15823 tttctcctttcccttcccctcct 15801
>ref|XM_001226873.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_08947) mRNA, complete cds Length = 3297 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tctttctcctttcccttcccct 34 |||||||||||||||||||||| Sbjct: 3236 tctttctcctttcccttcccct 3215
>ref|XM_522664.2| PREDICTED: Pan troglodytes FRAS1 related extracellular matrix protein 2 (FREM2), mRNA Length = 14972 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1140 caatgaggaaactgatgacttg 1161 |||||||||||||||||||||| Sbjct: 3226 caatgaggaaactgatgacttg 3247
>gb|AC186350.2| Gallus gallus BAC clone CH261-162L9 from chromosome z, complete sequence Length = 176331 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 ctttctcctttcccttcccctcctcc 39 ||||||||||||||||||||| |||| Sbjct: 73702 ctttctcctttcccttccccttctcc 73677
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 17555414 gctgctgccgctgccgccgctgcagc 17555439
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 11715346 gctgccgctgccgccgctgcagcagc 11715371
>ref|NM_207361.3| Homo sapiens FRAS1 related extracellular matrix protein 2 (FREM2), mRNA tpe|BN000687.1| TPA_exp: Homo sapiens mRNA for Fras1-related extracellular matrix protein 2 (FREM2 gene) Length = 9510 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1140 caatgaggaaactgatgacttg 1161 |||||||||||||||||||||| Sbjct: 2916 caatgaggaaactgatgacttg 2937
>gb|AC188098.1| Pongo pygmaeus abelii chromosome UNK clone CH276-29H12, complete sequence Length = 221120 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 ctttctcctttcccttcccctcctcc 39 |||||||| ||||||||||||||||| Sbjct: 21688 ctttctccattcccttcccctcctcc 21663
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 ctcctttcccttcccctcctcc 39 |||||||||||||||||||||| Sbjct: 131203 ctcctttcccttcccctcctcc 131182
>gb|AC162520.7| Mus musculus chromosome 5, clone RP24-118C7, complete sequence Length = 187196 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctc 38 |||||||||||||||||||||| Sbjct: 183373 tctcctttcccttcccctcctc 183352
>gb|AC113469.9| Mus musculus chromosome 8, clone RP23-261B5, complete sequence Length = 198937 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 gtttctttctcctttcccttcc 31 |||||||||||||||||||||| Sbjct: 38532 gtttctttctcctttcccttcc 38511
>gb|AC122774.11| Mus musculus chromosome 15, clone RP24-189C9, complete sequence Length = 154384 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ttctttctcctttcccttcccctcct 37 ||||||||||||||||||| |||||| Sbjct: 2759 ttctttctcctttcccttctcctcct 2784
>gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete sequence Length = 193262 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 166782 gctgccgctgccgccgctgcagcagc 166757
>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence Length = 221263 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 ttctttctcctttcccttcccc 33 |||||||||||||||||||||| Sbjct: 103379 ttctttctcctttcccttcccc 103400
>gb|AC124472.4| Mus musculus BAC clone RP24-83E15 from chromosome 7, complete sequence Length = 204477 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 tttctcctttcccttcccctcc 36 |||||||||||||||||||||| Sbjct: 74842 tttctcctttcccttcccctcc 74821
>ref|NM_001014590.1| Drosophila melanogaster Ecdysone-induced protein 74EF CG32180-RD, transcript variant D (Eip74EF), mRNA Length = 4753 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 2597 gctgctgccgctgccgccgctgcagc 2572
>ref|NM_168741.2| Drosophila melanogaster Ecdysone-induced protein 74EF CG32180-RB, transcript variant B (Eip74EF), mRNA Length = 5059 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 2903 gctgctgccgctgccgccgctgcagc 2878
>ref|NM_168740.2| Drosophila melanogaster Ecdysone-induced protein 74EF CG32180-RA, transcript variant A (Eip74EF), mRNA Length = 5994 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 3838 gctgctgccgctgccgccgctgcagc 3813
>ref|NM_168739.2| Drosophila melanogaster Ecdysone-induced protein 74EF CG32180-RC, transcript variant C (Eip74EF), mRNA Length = 5994 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 3838 gctgctgccgctgccgccgctgcagc 3813
>gb|BT022136.1| Drosophila melanogaster IP01592 full insert cDNA Length = 2468 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 1287 gctgccgctgccgccgctgcagcagc 1262
>ref|NM_057338.2| Drosophila melanogaster Pox neuro CG8246-RA (Poxn), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 1030 gctgccgctgccgccgctgcagcagc 1005
>gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's Hospital Oakland Research Institute) complete sequence Length = 209981 Score = 44.1 bits (22), Expect = 1.6 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 11 tttctttctc-ctttcccttcccctcctcccctacctt 47 |||||||||| ||||||||||||||||| |||| |||| Sbjct: 155097 tttctttctctctttcccttcccctccttccctccctt 155060
>gb|AC160632.5| Mus musculus chromosome 8, clone RP24-319F9, complete sequence Length = 163311 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctcccctacct 46 ||||||||||| ||||||||||| |||||| Sbjct: 7799 tctcctttcccctcccctcctcctctacct 7770
>gb|AC100803.11| Homo sapiens chromosome 8, clone CTD-3064M3, complete sequence Length = 152418 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1165 atgtccacacaggcatctgctg 1186 |||||||||||||||||||||| Sbjct: 27681 atgtccacacaggcatctgctg 27660
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 650 gtgggccggtcagccattggac 671 |||||||||||||||||||||| Sbjct: 120930 gtgggccggtcagccattggac 120909
>gb|AC092909.6| Homo sapiens 3q BAC RP11-620O17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165589 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 tttctttctcctttcccttccc 32 |||||||||||||||||||||| Sbjct: 153246 tttctttctcctttcccttccc 153225
>ref|XM_754401.1| Ustilago maydis 521 hypothetical protein (UM03347.1) partial mRNA Length = 7092 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 4570 gctgctgccgctgccgccgctgcagc 4595
>gb|AC092068.2| Homo sapiens chromosome 19 clone CTC-265F19, complete sequence Length = 75782 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tttctttctcctttcccttcccctcc 36 ||||||||||| |||||||||||||| Sbjct: 69564 tttctttctcccttcccttcccctcc 69539
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 96808 gctgctgccgctgccgccgctgcagc 96833
>gb|AC108472.5| Homo sapiens BAC clone RP11-626E13 from 4, complete sequence Length = 36626 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 gtttctttctcctttcccttcc 31 |||||||||||||||||||||| Sbjct: 14615 gtttctttctcctttcccttcc 14636
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 16 ttctcctttcccttcccctcctcccc 41 ||||||||||||| |||||||||||| Sbjct: 15712401 ttctcctttccctccccctcctcccc 15712376
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 650 gtgggccggtcagccattggac 671 |||||||||||||||||||||| Sbjct: 6185525 gtgggccggtcagccattggac 6185504
>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone BACR04J01, complete sequence Length = 182560 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 136008 gctgccgctgccgccgctgcagcagc 136033
>emb|AL021026.1|HS127D3 Human DNA sequence from clone RP1-127D3 on chromosome 1q23-25 Contains the FMO3 gene for flavin containing monooxygenase 3, a novel flavin containing monooxygenase, the FMO2 gene for flavin containing monooxygenase 2, the 3' end of a novel gene, a novel gene and the 5' end of the FMO1 gene for flavin containing monooxygenase 1, complete sequence Length = 162075 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tctttctcctttcccttcccct 34 |||||||||||||||||||||| Sbjct: 133725 tctttctcctttcccttcccct 133704
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 tttctttctcctttcccttcccctcc 36 ||||||||||| |||||||||||||| Sbjct: 20006 tttctttctcccttcccttcccctcc 19981
>emb|X15087.1|DM74E Drosophila melanogaster 74E gene Length = 4800 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 2641 gctgctgccgctgccgccgctgcagc 2616
>gb|AC156798.2| Mus musculus BAC clone RP23-378B3 from chromosome 12, complete sequence Length = 220547 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 22 tttcccttcccctcctcccctacctt 47 ||||||||||||||||||||| |||| Sbjct: 199203 tttcccttcccctcctccccttcctt 199228
>gb|BT003745.1| Drosophila melanogaster SD03570 full insert cDNA Length = 4372 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 2188 gctgctgccgctgccgccgctgcagc 2163
>gb|AC138150.4| Homo sapiens chromosome 17, clone RP13-890H12, complete sequence Length = 38849 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 438 ccctgtgtgcatggaccaccctcaca 463 ||||||||||||||||||| |||||| Sbjct: 24758 ccctgtgtgcatggaccacgctcaca 24783
>gb|AC017111.4|AC017111 Homo sapiens BAC clone RP11-571G1 from 13, complete sequence Length = 193787 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1140 caatgaggaaactgatgacttg 1161 |||||||||||||||||||||| Sbjct: 81200 caatgaggaaactgatgacttg 81179
>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105 Length = 340000 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctc 38 |||||||||||||||||||||| Sbjct: 31965 tctcctttcccttcccctcctc 31944
>dbj|AP005792.5| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1533H12, complete sequence Length = 141371 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1165 atgtccacacaggcatctgctg 1186 |||||||||||||||||||||| Sbjct: 28316 atgtccacacaggcatctgctg 28295
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 ttctttctcctttcccttcccctcct 37 ||||||||||||||||||| |||||| Sbjct: 192484 ttctttctcctttcccttctcctcct 192509
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 agagaattttcaaacaaaccaa 243 |||||||||||||||||||||| Sbjct: 1497298 agagaattttcaaacaaaccaa 1497319
>gb|AC007122.1|AC007122 Drosophila melanogaster, chromosome 2R, region 52C1-52C3, P1 clones DS00541, DS06972, and DS08188, complete sequence Length = 93829 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 78125 gctgccgctgccgccgctgcagcagc 78150
>gb|AC102493.8| Mus musculus chromosome 8, clone RP24-546F2, complete sequence Length = 175883 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctcccctacct 46 ||||||||||| ||||||||||| |||||| Sbjct: 68936 tctcctttcccctcccctcctcctctacct 68907
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 ctcctttcccttcccctcctcc 39 |||||||||||||||||||||| Sbjct: 118130 ctcctttcccttcccctcctcc 118109
>emb|AL954140.7| Mouse DNA sequence from clone RP23-52I15 on chromosome 4, complete sequence Length = 98087 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tctttctcctttcccttcccct 34 |||||||||||||||||||||| Sbjct: 50922 tctttctcctttcccttcccct 50901
>emb|AL590007.5| Human DNA sequence from clone RP11-233D11 on chromosome 13 Contains the 5' end of the gene for a novel calx-beta domain containing protein similar to sea urchin ECM3 and a CpG island, complete sequence Length = 148828 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1140 caatgaggaaactgatgacttg 1161 |||||||||||||||||||||| Sbjct: 45027 caatgaggaaactgatgacttg 45048
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 16 ttctcctttcccttcccctcctcccc 41 ||||||||||||| |||||||||||| Sbjct: 113254 ttctcctttccctccccctcctcccc 113279
>gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complete sequence Length = 207908 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 ctcctttcccttcccctcctcc 39 |||||||||||||||||||||| Sbjct: 198340 ctcctttcccttcccctcctcc 198319
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 373 gaggctgctgccgttgccgccgctgc 398 ||||||||||||| |||||||||||| Sbjct: 932518 gaggctgctgccgctgccgccgctgc 932543
>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete sequence Length = 239244 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 tttctcctttcccttcccctcc 36 |||||||||||||||||||||| Sbjct: 234936 tttctcctttcccttcccctcc 234915
>dbj|AP000243.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:B335C24, complete sequence Length = 96174 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctc 38 |||||||||||||||||||||| Sbjct: 45923 tctcctttcccttcccctcctc 45902
>dbj|AP000203.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 1/12, complete sequence Length = 100000 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcctc 38 |||||||||||||||||||||| Sbjct: 66953 tctcctttcccttcccctcctc 66932
>gb|M86927.1|DROPOXNUP Fruitfly pox neuro protein (pox neuro) mRNA, complete cds Length = 2178 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 gctgccgttgccgccgctgcagcagc 404 ||||||| |||||||||||||||||| Sbjct: 1030 gctgccgctgccgccgctgcagcagc 1005
>gb|M37083.1|DROE74B Drosophila melanogaster E74B protein Length = 5315 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 3159 gctgctgccgctgccgccgctgcagc 3134
>gb|M37082.1|DROE74A Drosophila melanogaster E74A protein Length = 6479 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcagc 401 |||||||||| ||||||||||||||| Sbjct: 4323 gctgctgccgctgccgccgctgcagc 4298
>emb|CU012043.5| M.truncatula DNA sequence from clone MTH2-63O12 on chromosome 3, complete sequence Length = 120690 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 attttcaaacaaaccaacaac 247 ||||||||||||||||||||| Sbjct: 33126 attttcaaacaaaccaacaac 33106
>emb|CU179697.4| M.truncatula DNA sequence from clone MTH2-63I19 on chromosome 3, complete sequence Length = 108031 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 attttcaaacaaaccaacaac 247 ||||||||||||||||||||| Sbjct: 96932 attttcaaacaaaccaacaac 96912
>ref|XM_001133726.1| PREDICTED: Homo sapiens hypothetical protein LOC731713 (LOC731713), mRNA Length = 1328 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tccggcggccacggacgcggt 119 ||||||||||||||||||||| Sbjct: 1189 tccggcggccacggacgcggt 1169
>ref|XM_001126140.1| PREDICTED: Homo sapiens hypothetical protein LOC727846 (LOC727846), mRNA Length = 1328 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tccggcggccacggacgcggt 119 ||||||||||||||||||||| Sbjct: 1189 tccggcggccacggacgcggt 1169
>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete sequence Length = 202850 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 tctttctcctttcccttcccc 33 ||||||||||||||||||||| Sbjct: 158057 tctttctcctttcccttcccc 158037
>gb|AC145078.2| Mus musculus chromosome 1, clone RP24-439O10, complete sequence Length = 162864 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 15 tttctcctttcccttcccctcctccccta 43 ||||| ||||||||||||||||| ||||| Sbjct: 106597 tttcttctttcccttcccctccttcccta 106569
>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence Length = 187883 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tctcctttcccttcccctcct 37 ||||||||||||||||||||| Sbjct: 43873 tctcctttcccttcccctcct 43893
>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence Length = 195506 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ttctcctttcccttcccctcctccc 40 |||||||| |||||||||||||||| Sbjct: 70780 ttctccttccccttcccctcctccc 70804
>gb|AC122450.4| Mus musculus BAC clone RP24-249K4 from chromosome 1, complete sequence Length = 154695 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ctttctcctttcccttcccctcctc 38 |||||||||||||| |||||||||| Sbjct: 145055 ctttctcctttcccctcccctcctc 145031
>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence Length = 225829 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ctcctttcccttcccctcctc 38 ||||||||||||||||||||| Sbjct: 87252 ctcctttcccttcccctcctc 87232
>gb|AC122213.4| Mus musculus BAC clone RP23-104C8 from chromosome 18, complete sequence Length = 188125 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 tttctttctcctttcccttcc 31 ||||||||||||||||||||| Sbjct: 84324 tttctttctcctttcccttcc 84344
>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence Length = 159308 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 tcctttcccttcccctcctcccctacctt 47 ||||||||| |||||||||||||| |||| Sbjct: 39621 tcctttcccctcccctcctcccctccctt 39593
>gb|AC116576.3| Mus musculus BAC clone RP23-263J19 from 3, complete sequence Length = 205336 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 tcctttcccttcccctcctccccta 43 |||||||||||| |||||||||||| Sbjct: 37693 tcctttcccttctcctcctccccta 37717
>gb|AC096035.6| Rattus norvegicus 4 BAC CH230-16M16 (Children's Hospital Oakland Research Institute) complete sequence Length = 228433 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 tttctcctttcccttcccctcctcc 39 ||||||||||| ||||||||||||| Sbjct: 80897 tttctcctttctcttcccctcctcc 80921
>dbj|AK055284.1| Homo sapiens cDNA FLJ30722 fis, clone FCBBF4000268 Length = 1048 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tccggcggccacggacgcggt 119 ||||||||||||||||||||| Sbjct: 11 tccggcggccacggacgcggt 31
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1215 cggcgatcctgcacagtgatg 1235 ||||||||||||||||||||| Sbjct: 1990389 cggcgatcctgcacagtgatg 1990369
>gb|BC035142.2| Homo sapiens cDNA clone IMAGE:5264359 Length = 1070 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 tccggcggccacggacgcggt 119 ||||||||||||||||||||| Sbjct: 9 tccggcggccacggacgcggt 29
>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence Length = 189533 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 18 ctcctttcccttcccctcctcccct 42 ||||||||||||| ||||||||||| Sbjct: 102392 ctcctttcccttctcctcctcccct 102416
>gb|AC112166.3| Homo sapiens chromosome 16 clone CTB-134H23, complete sequence Length = 131839 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ttctcctttcccttcccctcc 36 ||||||||||||||||||||| Sbjct: 62232 ttctcctttcccttcccctcc 62212
>gb|AC104335.2| Homo sapiens chromosome 1 clone RP11-433K2, complete sequence Length = 212426 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 tctttctcctttcccttcccctcctcccc 41 ||||||||| |||||||||||||| |||| Sbjct: 209615 tctttctcccttcccttcccctccccccc 209643
>gb|AC008694.6| Homo sapiens chromosome 5 clone CTB-6E24, complete sequence Length = 136843 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 tccggcggccacggacgcggt 119 ||||||||||||||||||||| Sbjct: 116536 tccggcggccacggacgcggt 116516
>gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, complete sequence Length = 200318 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1540 attctgctgaattccatttgg 1560 ||||||||||||||||||||| Sbjct: 160282 attctgctgaattccatttgg 160262
>emb|Z75542.1|CEF55D12 Caenorhabditis elegans Cosmid F55D12, complete sequence Length = 31131 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 gttgccgccgctgcagcagca 405 ||||||||||||||||||||| Sbjct: 26450 gttgccgccgctgcagcagca 26470
>gb|AC087435.5| Homo sapiens chromosome 8, clone RP11-79O20, complete sequence Length = 158447 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1540 attctgctgaattccatttgg 1560 ||||||||||||||||||||| Sbjct: 97536 attctgctgaattccatttgg 97556
>gb|AC096317.6| Rattus norvegicus 1 BAC CH230-148F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 211459 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctttcccttcccctcctccc 40 ||||||||||||||||||||| Sbjct: 69970 cctttcccttcccctcctccc 69990
>gb|AC092757.2| Homo sapiens chromosome 15 clone RP11-59H7 map 15q21.3, complete sequence Length = 171114 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ctttctcctttcccttcccct 34 ||||||||||||||||||||| Sbjct: 81779 ctttctcctttcccttcccct 81799
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 376 gctgctgccgttgccgccgctgcag 400 |||||||| |||||||||||||||| Sbjct: 96071 gctgctgcagttgccgccgctgcag 96047
>gb|AC068129.6| Homo sapiens BAC clone RP11-619F9 from 2, complete sequence Length = 150646 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 actctcgtttctttctcctttccct 28 ||||| ||||||||||||||||||| Sbjct: 36921 actcttgtttctttctcctttccct 36897
>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence Length = 179517 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tctttctcctttcccttcccc 33 ||||||||||||||||||||| Sbjct: 24995 tctttctcctttcccttcccc 25015
>gb|AC093008.10| Homo sapiens 3 BAC RP11-663C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187889 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ctttctcctttcccttcccctcctc 38 |||||||| |||||||||||||||| Sbjct: 10976 ctttctccattcccttcccctcctc 10952
>dbj|BS000107.1| Pan troglodytes chromosome 22 clone:PTB-020H02, map 22, complete sequences Length = 145633 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcct 37 ||||||||||||||||||||| Sbjct: 37802 tctcctttcccttcccctcct 37782
>gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, complete sequence Length = 152500 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ttctcctttcccttcccctcctccc 40 |||||||| |||||||||||||||| Sbjct: 78346 ttctccttccccttcccctcctccc 78370
>gb|AY104499.1| Zea mays PCO097463 mRNA sequence Length = 970 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 378 tgctgccgttgccgccgctgc 398 ||||||||||||||||||||| Sbjct: 77 tgctgccgttgccgccgctgc 57
>ref|XM_664837.1| Plasmodium berghei strain ANKA hypothetical protein (PB401576.00.0) partial mRNA Length = 265 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 18 ctcctttcccttcccctcctcccctacct 46 ||||| |||||||||||||||| |||||| Sbjct: 105 ctcctctcccttcccctcctcctctacct 133
>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete sequence Length = 212233 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ctcctttcccttcccctcctc 38 ||||||||||||||||||||| Sbjct: 95740 ctcctttcccttcccctcctc 95760
>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence Length = 215582 Score = 42.1 bits (21), Expect = 6.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 ctttctcctttcccttcccctcctc 38 |||||||||||||| |||||||||| Sbjct: 189027 ctttctcctttcccctcccctcctc 189051
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence Length = 226568 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 19 tcctttcccttcccctcctcccctacctt 47 ||||||||| |||||||||||||| |||| Sbjct: 156050 tcctttcccctcccctcctcccctccctt 156022
>emb|AL672247.8| Mouse DNA sequence from clone RP23-95I19 on chromosome X, complete sequence Length = 224241 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 ctttctcctttcccttcccctcctcccct 42 |||||||| ||||||||||||||||||| Sbjct: 50491 ctttctcccctcccttcccctcctcccct 50519
>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete sequence Length = 222709 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 tctcctttcccttcccctcct 37 ||||||||||||||||||||| Sbjct: 219861 tctcctttcccttcccctcct 219841
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 18 ctcctttcccttcccctcctcccctacct 46 ||||| |||||||||||||||| |||||| Sbjct: 101895 ctcctctcccttcccctcctcctctacct 101867
>emb|AL844856.6| Mouse DNA sequence from clone RP23-377G1 on chromosome 4, complete sequence Length = 183318 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 tctcctttcccttcccctcct 37 ||||||||||||||||||||| Sbjct: 84713 tctcctttcccttcccctcct 84733
>emb|AL731725.8| Mouse DNA sequence from clone RP23-146P19 on chromosome X, complete sequence Length = 213743 Score = 42.1 bits (21), Expect = 6.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 gtttctttctcctttcccttcccctcctc 38 |||||||||||||| |||| ||||||||| Sbjct: 45553 gtttctttctccttcccctccccctcctc 45525
>dbj|AP004284.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1268B10 Length = 145226 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1540 attctgctgaattccatttgg 1560 ||||||||||||||||||||| Sbjct: 10167 attctgctgaattccatttgg 10147
>dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1461G7 Length = 168155 Score = 42.1 bits (21), Expect = 6.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1540 attctgctgaattccatttgg 1560 ||||||||||||||||||||| Sbjct: 138483 attctgctgaattccatttgg 138463 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 271,340,360 Number of extensions: 15490365 Number of successful extensions: 340962 Number of sequences better than 10.0: 147 Number of HSP's gapped: 340941 Number of HSP's successfully gapped: 173 Length of query: 1615 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1592 Effective length of database: 18,503,978,556 Effective search space: 29458333861152 Effective search space used: 29458333861152 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
