| Clone Name | FLbaf112k03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105900.1| Zea mays PCO085848 mRNA sequence Length = 1367 Score = 456 bits (230), Expect = e-125 Identities = 557/666 (83%) Strand = Plus / Plus Query: 142 tcgggctttggatccgcgtccaccgcagaggacatcgccgccggcatcgacgccagccat 201 |||||||| || |||||||||||||| ||||| || |||||||| ||||||| ||| | Sbjct: 176 tcgggcttcggctccgcgtccaccgccgaggaggtcaccgccggcgtcgacgcaagcaac 235 Query: 202 ctcacggccatcgtcacaggggcaacaaatggcattggcaaggagacggccagagttctt 261 |||| |||||||||||||| || || ||||||||||| |||||||| ||||||||||| Sbjct: 236 atcactgccatcgtcacaggagcgacgaatggcattggaaaggagacagccagagttcta 295 Query: 262 gcactgaggggagcaaacgtgatcataccagcaaggacgctcgagagtggcatgaaggtg 321 |||||||||||||| || || ||||||||||| ||||| || ||||||||| | ||| || Sbjct: 296 gcactgaggggagccaaggtaatcataccagctaggacactggagagtggcctcaagttg 355 Query: 322 aaagagagcctcgctgaagaggtcccgagctcgaagctccatgtcatggagatggatctg 381 || ||||||||||| || |||||||| ||||| ||| | || || ||||||||||| ||| Sbjct: 356 aaggagagcctcgcagatgaggtcccaagctccaaggtacacgttatggagatggacctg 415 Query: 382 agctcccttgactctgttcgcagcttcgcgggctccttcaactcctcgcataagcatctg 441 |||| || ||| || ||| |||||| | |||||||| || || || ||||||||| Sbjct: 416 agctgtctcagctccgtccgcgacttcgcacggtccttcaattcatcccacaagcatctg 475 Query: 442 aacgtcctcataaacaatgcagggataatggcctgccctttccatctgtccaaagatggc 501 ||| |||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||| Sbjct: 476 aacctcctcataaacaatgcagggatcatggcctgcccttaccagctgtccaaggatgga 535 Query: 502 attgagctacaattcgcaacgaatcatcttggccatttcttgctgacaaatcttctacta 561 |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| || ||| Sbjct: 536 attgagctgcaattcgcaacgaatcatgttggccatttcttgctgacaagtctcctgcta 595 Query: 562 gacaagatgaaatcaactgccaaggagaccggtgtgcagggcaggatcgtaaacctagct 621 |||||||||||||||||||| ||||| ||||||||||| |||||| ||||| || | Sbjct: 596 gacaagatgaaatcaactgctgcagagacaggtgtgcagggaaggatcataaacgtatca 655 Query: 622 tcaacagctcatagaagaagtgatggcaacggctttgatctgaacaagctaaacgacaag 681 || || |||| |||||||||||| | ||||||| ||||||||||||||||| ||| Sbjct: 656 tcggtcgcgcataaaagaagtgatggtacatgctttgagctgaacaagctaaacgataag 715 Query: 682 tccaagtacaatgcatttgctgcatacgcacactccaaattagcaaatattctccacgca 741 | | |||||| | || ||||||||| || || || ||||| |||||||||||| || Sbjct: 716 gctaggtacaaaccgttcattgcatacgcgcattcgaagttagccaatattctccacaca 775 Query: 742 aatgagctatccaggcgttttcaggaagaaggatgtgatctgactgcgaattcgctgcac 801 |||||| | |||||||||||||||||||||||||| | ||||| |||||||| ||||| Sbjct: 776 aatgagttgtccaggcgttttcaggaagaaggatgcaacctgacagcgaattccctgcat 835 Query: 802 cctgga 807 |||||| Sbjct: 836 cctgga 841 Score = 67.9 bits (34), Expect = 8e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 898 ccccagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtcc 957 |||| ||| ||||||||||| ||||| |||||||||| ||| || ||| || || || Sbjct: 935 ccccggggggctgcaactacttgttacttggcattgcaccctaatgtcaaaggtgtatct 994 Query: 958 ggcaaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgcagag 1017 || ||||||||||||| |||||| || || ||||| || | ||||| ||||| ||||| Sbjct: 995 ggtaaatacttcgctgattgcaatgaagcaacaccgactgctgtcgcgagagactcagag 1054 Query: 1018 ctggccaagagcctgtgggcattcagtgaagaacttgt 1055 ||||| ||||| || ||| | ||||| ||||||||||| Sbjct: 1055 ctggcgaagaggctatggtcgttcagcgaagaacttgt 1092
>gb|BT018901.1| Zea mays clone EL01T0208A08.d mRNA sequence Length = 1231 Score = 389 bits (196), Expect = e-104 Identities = 559/680 (82%) Strand = Plus / Plus Query: 154 tccgcgtccaccgcagaggacatcgccgccggcatcgacgccagccatctcacggccatc 213 |||||||||||||| || || || |||||||| ||||||| ||| | |||| |||||| Sbjct: 106 tccgcgtccaccgccgatgaggtcaccgccggcgtcgacgcaagcaacatcactgccatc 165 Query: 214 gtcacaggggcaacaaatggcattggcaaggagacggccagagttcttgcactgagggga 273 |||||||| || || ||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 166 gtcacaggagcgacgaatggcattggaaaggagacagccagagttctatcactgagggga 225 Query: 274 gcaaacgtgatcataccagcaaggacgctcgagagtggcatgaaggtgaaagagagcctc 333 || || || ||||||||||| ||||| || ||||||||| | ||| |||| ||||||||| Sbjct: 226 gccaaggtaatcataccagctaggactctggagagtggcctcaagttgaaggagagcctc 285 Query: 334 gctgaagaggtcccgagctcgaagctccatgtcatggagatggatctgagctcccttgac 393 || || |||||||| ||||| || | || || ||||||||||| ||||||| || | Sbjct: 286 gcagatgaggtcccaagctccaatgtacacgttatggagatggacctgagctgtctcagc 345 Query: 394 tctgttcgcagcttcgcgggctccttcaactcctcgcataagcatctgaacgtcctcata 453 || || ||| |||||| | |||||||| || || || |||||||||||| |||||||| Sbjct: 346 tccgtccgcgacttcgcacggtccttcaattcatcccacaagcatctgaacctcctcata 405 Query: 454 aacaatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctacaa 513 ||||||||| |||| ||||||||||||| ||| |||||||| ||||| |||||||| ||| Sbjct: 406 aacaatgcatggatcatggcctgcccttaccagctgtccaaggatggaattgagctgcaa 465 Query: 514 ttcgcaacgaatcatcttggccatttcttgctgacaaatcttctactagacaagatgaaa 573 ||||||||||||||| |||| |||||||||||||||| ||| || ||||||||||||||| Sbjct: 466 ttcgcaacgaatcatgttggtcatttcttgctgacaagtctcctgctagacaagatgaaa 525 Query: 574 tcaactgccaaggagaccggtgtgcagggcaggatcgtaaacctagcttcaacagctcat 633 |||||||| | || ||||||||||| |||||| ||||| || | || | ||| Sbjct: 526 tcaactgctcctaaaacaggtgtgcagggaaggatcataaacgtatcatccttcgagcat 585 Query: 634 agaagaagtgatggcaacggctttgatctgaacaagctaaacgacaagtccaagtacaat 693 | |||||||||||| | ||||||| ||||||||||||||||| ||| | | |||| | Sbjct: 586 aaaagaagtgatggtacatgctttgagctgaacaagctaaacgataaggctaggtaccaa 645 Query: 694 gcatttgctgcatacgcacactccaaattagcaaatattctccacgcaaatgagctatcc 753 | || ||||||||| || || || ||||| ||| |||||||| |||||||| ||||| Sbjct: 646 ccgttcattgcatacgcgcattcgaagttagccaatgttctccacacaaatgagttatcc 705 Query: 754 aggcgttttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctggaatcatc 813 ||||||||||||||||||||||| ||||||| |||||||| ||||| |||||| | ||| Sbjct: 706 aggcgttttcaggaagaaggatgcaatctgacagcgaattccctgcatcctggagtgatc 765 Query: 814 ggaaccaacatcgttcgcta 833 | ||||| ||| ||||||| Sbjct: 766 gtcaccaatatcattcgcta 785 Score = 67.9 bits (34), Expect = 8e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 898 ccccagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtcc 957 |||| ||| ||||||||||| ||||| |||||||||| ||| || ||| || || || Sbjct: 851 ccccggggggctgcaactacttgttacttggcattgcaccctaatgtcaaaggtgtatct 910 Query: 958 ggcaaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgcagag 1017 || ||||||||||||| |||||| || || ||||| || | ||||| ||||| ||||| Sbjct: 911 ggtaaatacttcgctgattgcaatgaagcaacaccgactgctgtcgcgagagactcagag 970 Query: 1018 ctggccaagagcctgtgggcattcagtgaagaacttgt 1055 ||||| ||||| || ||| | ||||| ||||||||||| Sbjct: 971 ctggcgaagaggctatggtcgttcagcgaagaacttgt 1008
>ref|NM_001072434.1| Oryza sativa (japonica cultivar-group) Os11g0181800 (Os11g0181800) mRNA, complete cds Length = 1408 Score = 367 bits (185), Expect = 6e-98 Identities = 374/437 (85%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacaggggcaacaaatggcattg 238 |||||||| |||||||||||| || |||| | |||||||||| |||||||||||||| | Sbjct: 140 ccgccggcgtcgacgccagccgcctgacggtcgtcgtcacaggtgcaacaaatggcatag 199 Query: 239 gcaaggagacggccagagttcttgcactgaggggagcaaacgtgatcataccagcaagga 298 | |||||||| || || || |||||||| ||||||||| | |||||| |||||||||||| Sbjct: 200 gaaaggagacagctagggtccttgcactaaggggagcagaggtgatcttaccagcaagga 259 Query: 299 cgctcgagagtggcatgaaggtgaaagagagcctcgctgaagaggtcccgagctcgaagc 358 | || ||||||||||||||||||||| ||||||| || || || |||| ||||| |||| Sbjct: 260 cactggagagtggcatgaaggtgaaacagagccttgcagaggaaatccccagctcaaagc 319 Query: 359 tccatgtcatggagatggatctgagctcccttgactctgttcgcagcttcgcgggctcct 418 |||||||||||||||||||||| |||||||| ||||| |||||||||||||| || | Sbjct: 320 tccatgtcatggagatggatcttagctccctcgactccgttcgcagcttcgcaaaatcgt 379 Query: 419 tcaactcctcgcataagcatctgaacgtcctcataaacaatgcagggataatggcctgcc 478 ||||||| || ||| ||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 380 tcaactcgtcttataggcatctgaacgtcctcataaataatgcaggggtaatgtcctgcc 439 Query: 479 ctttccatctgtccaaagatggcattgagctacaattcgcaacgaatcatcttggccatt 538 |||| || ||||||||||| |||||||| ||||| |||||||||||| |||| |||| Sbjct: 440 cttttggactatccaaagatgggattgagcttcaatttgcaacgaatcatgttgggcatt 499 Query: 539 tcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggtgtgc 598 |||||||||||||||| || || |||||||||||| | || || || ||||| ||| ||| Sbjct: 500 tcttgctgacaaatctccttctcgacaagatgaaagccacggctaaagagactggtttgc 559 Query: 599 agggcaggatcgtaaac 615 ||||||||||| ||||| Sbjct: 560 agggcaggatcataaac 576 Score = 125 bits (63), Expect = 4e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 715 tccaaattagcaaatattctccacgcaaatgagctatccaggcgttttcaggaagaagga 774 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 676 tccaaattagcgaatattctccatgcaaatgaactatccaggcgttttcaggaagaagga 735 Query: 775 tgtgatctgactgcgaattcgctgcaccctggaatcatcggaaccaacatcgttcgctac 834 || |||||||||| ||||| ||||| |||||| | |||| |||||| || |||| || Sbjct: 736 tgcaatctgactgcaaattccctgcatcctggagtaatcgccaccaacctccctcgccac 795 Query: 835 atcacgacaaacagt 849 ||| |||||||||| Sbjct: 796 atcctgacaaacagt 810 Score = 85.7 bits (43), Expect = 4e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 895 ataccccagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtg 954 ||||| ||||||||||| || | ||||||| | ||||||||||||| |||| |||| Sbjct: 856 atacctcagggagctgcgacgaactgttatctagcattgcatcctggattgaaggacgtg 915 Query: 955 tccggcaaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgca 1014 |||||||||||||| || | |||||||| || || || ||| | || |||||||||||| Sbjct: 916 tccggcaaatactttgccgactgcaacgaagctacgccgacggctgttgcaagagatgca 975 Query: 1015 gagctggccaagagcctgtgggcattcagtgaagaactt 1053 ||||| || |||| ||||||| ||||||||||||||| Sbjct: 976 gagctagcaaagaagctgtgggagttcagtgaagaactt 1014
>dbj|AK071972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084L13, full insert sequence Length = 1409 Score = 367 bits (185), Expect = 6e-98 Identities = 374/437 (85%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacaggggcaacaaatggcattg 238 |||||||| |||||||||||| || |||| | |||||||||| |||||||||||||| | Sbjct: 141 ccgccggcgtcgacgccagccgcctgacggtcgtcgtcacaggtgcaacaaatggcatag 200 Query: 239 gcaaggagacggccagagttcttgcactgaggggagcaaacgtgatcataccagcaagga 298 | |||||||| || || || |||||||| ||||||||| | |||||| |||||||||||| Sbjct: 201 gaaaggagacagctagggtccttgcactaaggggagcagaggtgatcttaccagcaagga 260 Query: 299 cgctcgagagtggcatgaaggtgaaagagagcctcgctgaagaggtcccgagctcgaagc 358 | || ||||||||||||||||||||| ||||||| || || || |||| ||||| |||| Sbjct: 261 cactggagagtggcatgaaggtgaaacagagccttgcagaggaaatccccagctcaaagc 320 Query: 359 tccatgtcatggagatggatctgagctcccttgactctgttcgcagcttcgcgggctcct 418 |||||||||||||||||||||| |||||||| ||||| |||||||||||||| || | Sbjct: 321 tccatgtcatggagatggatcttagctccctcgactccgttcgcagcttcgcaaaatcgt 380 Query: 419 tcaactcctcgcataagcatctgaacgtcctcataaacaatgcagggataatggcctgcc 478 ||||||| || ||| ||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 381 tcaactcgtcttataggcatctgaacgtcctcataaataatgcaggggtaatgtcctgcc 440 Query: 479 ctttccatctgtccaaagatggcattgagctacaattcgcaacgaatcatcttggccatt 538 |||| || ||||||||||| |||||||| ||||| |||||||||||| |||| |||| Sbjct: 441 cttttggactatccaaagatgggattgagcttcaatttgcaacgaatcatgttgggcatt 500 Query: 539 tcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggtgtgc 598 |||||||||||||||| || || |||||||||||| | || || || ||||| ||| ||| Sbjct: 501 tcttgctgacaaatctccttctcgacaagatgaaagccacggctaaagagactggtttgc 560 Query: 599 agggcaggatcgtaaac 615 ||||||||||| ||||| Sbjct: 561 agggcaggatcataaac 577 Score = 125 bits (63), Expect = 4e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 715 tccaaattagcaaatattctccacgcaaatgagctatccaggcgttttcaggaagaagga 774 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 677 tccaaattagcgaatattctccatgcaaatgaactatccaggcgttttcaggaagaagga 736 Query: 775 tgtgatctgactgcgaattcgctgcaccctggaatcatcggaaccaacatcgttcgctac 834 || |||||||||| ||||| ||||| |||||| | |||| |||||| || |||| || Sbjct: 737 tgcaatctgactgcaaattccctgcatcctggagtaatcgccaccaacctccctcgccac 796 Query: 835 atcacgacaaacagt 849 ||| |||||||||| Sbjct: 797 atcctgacaaacagt 811 Score = 85.7 bits (43), Expect = 4e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 895 ataccccagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtg 954 ||||| ||||||||||| || | ||||||| | ||||||||||||| |||| |||| Sbjct: 857 atacctcagggagctgcgacgaactgttatctagcattgcatcctggattgaaggacgtg 916 Query: 955 tccggcaaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgca 1014 |||||||||||||| || | |||||||| || || || ||| | || |||||||||||| Sbjct: 917 tccggcaaatactttgccgactgcaacgaagctacgccgacggctgttgcaagagatgca 976 Query: 1015 gagctggccaagagcctgtgggcattcagtgaagaactt 1053 ||||| || |||| ||||||| ||||||||||||||| Sbjct: 977 gagctagcaaagaagctgtgggagttcagtgaagaactt 1015
>emb|CT829986.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA002B17, full insert sequence Length = 1243 Score = 285 bits (144), Expect = 2e-73 Identities = 522/648 (80%) Strand = Plus / Plus Query: 160 tccaccgcagaggacatcgccgccggcatcgacgccagccatctcacggccatcgtcaca 219 |||||||| ||||| || |||||||| | ||||||| ||| ||||| |||||||||||| Sbjct: 97 tccaccgccgaggaggtcaccgccggcgtagacgccacccacctcaccgccatcgtcaca 156 Query: 220 ggggcaacaaatggcattggcaaggagacggccagagttcttgcactgaggggagcaaac 279 || || || || || || || | |||||||||| ||||||| || |||||| || | Sbjct: 157 ggagcgacgaacgggatcgggagggagacggcccgagttctggcgaggaggggggcggag 216 Query: 280 gtgatcataccagcaaggacgctcgagagtggcatgaaggtgaaagagagcctcgctgaa 339 |||||||| || || |||||| | ||||| |||| |||||| ||||| |||| || Sbjct: 217 gtgatcatcccggcgaggacgatggagagcggcaacgcggtgaagcagagcatcgcggag 276 Query: 340 gaggtcccgagctcgaagctccatgtcatggagatggatctgagctcccttgactctgtt 399 ||||||||| | || | |||||| ||||||||||||||||| ||| || ||||| || Sbjct: 277 gaggtcccggggtccaggctccacgtcatggagatggatctcgcctcgctcgactccgtc 336 Query: 400 cgcagcttcgcgggctccttcaactcctcgcataagcatctgaacgtcctcataaacaat 459 ||| ||||||| | | ||| ||||||| || | || || ||| |||||||||||||| Sbjct: 337 cgccgcttcgccaccgcgttcgactcctcccacacccacctcaacatcctcataaacaat 396 Query: 460 gcagggataatggcctgccctttccatctgtccaaagatggcattgagctacaattcgca 519 ||||||||||||| ||||||||| | || ||||| ||||| |||||||| || |||||| Sbjct: 397 gcagggataatggggtgccctttcaagctatccaaggatgggattgagctgcagttcgca 456 Query: 520 acgaatcatcttggccatttcttgctgacaaatcttctactagacaagatgaaatcaact 579 ||||||||| | || ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 457 acgaatcatgtcggtcatttcttgcttacaaatcttctgctcgacaagatgaaatcgacg 516 Query: 580 gccaaggagaccggtgtgcagggcaggatcgtaaacctagcttcaacagctcatagaaga 639 || | | ||||||| ||||||||||||||||| ||| || | || | || || | ||| Sbjct: 517 gctaggaagaccggcgtgcagggcaggatcgtgaacgtatcgtctattgcgcacaagaga 576 Query: 640 agtgatggcaacggctttgatctgaacaagctaaacgacaagtccaagtacaatgcattt 699 |||||||| ||||||||||||||||||||||||| ||||| | |||||| || | Sbjct: 577 agtgatggttcttgctttgatctgaacaagctaaacgataagtctaggtacaaaccactc 636 Query: 700 gctgcatacgcacactccaaattagcaaatattctccacgcaaatgagctatccaggcgt 759 |||||| ||||| ||||||||||| |||||||| || |||||||||||| | | |||| Sbjct: 637 attgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgt 696 Query: 760 tttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctgga 807 |||||||||||||||||| || ||||||| ||||| ||||| |||||| Sbjct: 697 tttcaggaagaaggatgtaatttgactgcaaattccctgcatcctgga 744 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 838 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 897 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 898 aaatacttcgc 908
>ref|NM_001072433.1| Oryza sativa (japonica cultivar-group) Os11g0181700 (Os11g0181700) mRNA, complete cds Length = 1240 Score = 280 bits (141), Expect = 1e-71 Identities = 507/629 (80%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacaggggcaacaaatggcattg 238 |||||||| | ||||||| ||| ||||| |||||||||||||| || || || || || | Sbjct: 113 ccgccggcgtagacgccacccacctcaccgccatcgtcacaggagcgacgaacgggatcg 172 Query: 239 gcaaggagacggccagagttcttgcactgaggggagcaaacgtgatcataccagcaagga 298 | | |||||||||| ||||||| || |||||| || | |||||||| || || |||| Sbjct: 173 ggagggagacggcccgagttctggcgaggaggggggcggaggtgatcatcccggcgagga 232 Query: 299 cgctcgagagtggcatgaaggtgaaagagagcctcgctgaagaggtcccgagctcgaagc 358 || | ||||| |||| |||||| ||||| |||| || ||||||||| | || | || Sbjct: 233 cgatggagagcggcaacgcggtgaagcagagcatcgcggaggaggtcccggggtccaggc 292 Query: 359 tccatgtcatggagatggatctgagctcccttgactctgttcgcagcttcgcgggctcct 418 |||| ||||||||||||||||| ||| || ||||| || ||| ||||||| | | | Sbjct: 293 tccacgtcatggagatggatctcgcctcgctcgactccgtccgccgcttcgccaccgcgt 352 Query: 419 tcaactcctcgcataagcatctgaacgtcctcataaacaatgcagggataatggcctgcc 478 || ||||||| || | || || ||| ||||||||||||||||||||||||||| |||| Sbjct: 353 tcgactcctcccacacccacctcaacatcctcataaacaatgcagggataatggggtgcc 412 Query: 479 ctttccatctgtccaaagatggcattgagctacaattcgcaacgaatcatcttggccatt 538 ||||| | || ||||| ||||| |||||||| || ||||||||||||||| | || |||| Sbjct: 413 ctttcaagctatccaaggatgggattgagctgcagttcgcaacgaatcatgtcggtcatt 472 Query: 539 tcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggtgtgc 598 ||||||| ||||||||||| || |||||||||||||| || || | | ||||||| |||| Sbjct: 473 tcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggcgtgc 532 Query: 599 agggcaggatcgtaaacctagcttcaacagctcatagaagaagtgatggcaacggctttg 658 ||||||||||||| ||| || | || | || || | ||||||||||| |||||| Sbjct: 533 agggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgctttg 592 Query: 659 atctgaacaagctaaacgacaagtccaagtacaatgcatttgctgcatacgcacactcca 718 ||||||||||||||||||| ||||| | |||||| || | |||||| ||||| |||| Sbjct: 593 atctgaacaagctaaacgataagtctaggtacaaaccactcattgcatatgcacattcca 652 Query: 719 aattagcaaatattctccacgcaaatgagctatccaggcgttttcaggaagaaggatgtg 778 ||||||| |||||||| || |||||||||||| | | |||||||||||||||||||||| Sbjct: 653 aattagctaatattcttcatgcaaatgagctagcaaagcgttttcaggaagaaggatgta 712 Query: 779 atctgactgcgaattcgctgcaccctgga 807 || ||||||| ||||| ||||| |||||| Sbjct: 713 atttgactgcaaattccctgcatcctgga 741 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 835 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 894 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 895 aaatacttcgc 905
>dbj|AK062546.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-G08, full insert sequence Length = 1240 Score = 280 bits (141), Expect = 1e-71 Identities = 507/629 (80%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacaggggcaacaaatggcattg 238 |||||||| | ||||||| ||| ||||| |||||||||||||| || || || || || | Sbjct: 113 ccgccggcgtagacgccacccacctcaccgccatcgtcacaggagcgacgaacgggatcg 172 Query: 239 gcaaggagacggccagagttcttgcactgaggggagcaaacgtgatcataccagcaagga 298 | | |||||||||| ||||||| || |||||| || | |||||||| || || |||| Sbjct: 173 ggagggagacggcccgagttctggcgaggaggggggcggaggtgatcatcccggcgagga 232 Query: 299 cgctcgagagtggcatgaaggtgaaagagagcctcgctgaagaggtcccgagctcgaagc 358 || | ||||| |||| |||||| ||||| |||| || ||||||||| | || | || Sbjct: 233 cgatggagagcggcaacgcggtgaagcagagcatcgcggaggaggtcccggggtccaggc 292 Query: 359 tccatgtcatggagatggatctgagctcccttgactctgttcgcagcttcgcgggctcct 418 |||| ||||||||||||||||| ||| || ||||| || ||| ||||||| | | | Sbjct: 293 tccacgtcatggagatggatctcgcctcgctcgactccgtccgccgcttcgccaccgcgt 352 Query: 419 tcaactcctcgcataagcatctgaacgtcctcataaacaatgcagggataatggcctgcc 478 || ||||||| || | || || ||| ||||||||||||||||||||||||||| |||| Sbjct: 353 tcgactcctcccacacccacctcaacatcctcataaacaatgcagggataatggggtgcc 412 Query: 479 ctttccatctgtccaaagatggcattgagctacaattcgcaacgaatcatcttggccatt 538 ||||| | || ||||| ||||| |||||||| || ||||||||||||||| | || |||| Sbjct: 413 ctttcaagctatccaaggatgggattgagctgcagttcgcaacgaatcatgtcggtcatt 472 Query: 539 tcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggtgtgc 598 ||||||| ||||||||||| || |||||||||||||| || || | | ||||||| |||| Sbjct: 473 tcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggcgtgc 532 Query: 599 agggcaggatcgtaaacctagcttcaacagctcatagaagaagtgatggcaacggctttg 658 ||||||||||||| ||| || | || | || || | ||||||||||| |||||| Sbjct: 533 agggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgctttg 592 Query: 659 atctgaacaagctaaacgacaagtccaagtacaatgcatttgctgcatacgcacactcca 718 ||||||||||||||||||| ||||| | |||||| || | |||||| ||||| |||| Sbjct: 593 atctgaacaagctaaacgataagtctaggtacaaaccactcattgcatatgcacattcca 652 Query: 719 aattagcaaatattctccacgcaaatgagctatccaggcgttttcaggaagaaggatgtg 778 ||||||| |||||||| || |||||||||||| | | |||||||||||||||||||||| Sbjct: 653 aattagctaatattcttcatgcaaatgagctagcaaagcgttttcaggaagaaggatgta 712 Query: 779 atctgactgcgaattcgctgcaccctgga 807 || ||||||| ||||| ||||| |||||| Sbjct: 713 atttgactgcaaattccctgcatcctgga 741 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 835 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 894 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 895 aaatacttcgc 905
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 204 bits (103), Expect = 6e-49 Identities = 202/235 (85%) Strand = Plus / Plus Query: 218 caggggcaacaaatggcattggcaaggagacggccagagttcttgcactgaggggagcaa 277 |||| |||||||||||||| || |||||||| || || || |||||||| ||||||||| Sbjct: 50385 caggtgcaacaaatggcataggaaaggagacagctagggtccttgcactaaggggagcag 50444 Query: 278 acgtgatcataccagcaaggacgctcgagagtggcatgaaggtgaaagagagcctcgctg 337 | |||||| ||||||||||||| || ||||||||||||||||||||| ||||||| || | Sbjct: 50445 aggtgatcttaccagcaaggacactggagagtggcatgaaggtgaaacagagccttgcag 50504 Query: 338 aagaggtcccgagctcgaagctccatgtcatggagatggatctgagctcccttgactctg 397 | || |||| ||||| |||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 50505 aggaaatccccagctcaaagctccatgtcatggagatggatcttagctccctcgactccg 50564 Query: 398 ttcgcagcttcgcgggctccttcaactcctcgcataagcatctgaacgtcctcat 452 ||||||||||||| || |||||||| || ||| |||||||||||||||||| Sbjct: 50565 ttcgcagcttcgcaaaatcgttcaactcgtcttataggcatctgaacgtcctcat 50619 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 535 catttcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggt 594 ||||||||||| ||||||||||| || |||||||||||||| || || | | ||||||| Sbjct: 47863 catttcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggc 47922 Query: 595 gtgcagggcaggatcgtaaacctagcttcaacagctcatagaagaagtgatggcaacggc 654 ||||||||||||||||| ||| || | || | || || | ||||||||||| || Sbjct: 47923 gtgcagggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgc 47982 Query: 655 tttgatctgaacaagctaaacgacaagtc 683 ||||||||||||||||||||||| ||||| Sbjct: 47983 tttgatctgaacaagctaaacgataagtc 48011 Score = 81.8 bits (41), Expect = 6e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 ||||||||||| || | ||||||| | ||||||||||||| |||| |||||||||| Sbjct: 52969 cagggagctgcgacgaactgttatctagcattgcatcctggattgaaggacgtgtccggc 53028 Query: 961 aaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgcagagctg 1020 |||||||| || | |||||||| || || || ||| | || ||||||||||||||||| Sbjct: 53029 aaatactttgccgactgcaacgaagctacgccgacggctgttgcaagagatgcagagcta 53088 Query: 1021 gccaagagcctgtgggcattcagtgaagaactt 1053 || |||| ||||||| ||||||||||||||| Sbjct: 53089 gcaaagaagctgtgggagttcagtgaagaactt 53121 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 453 aaacaatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctaca 512 |||||||||||||||||||| ||||||||| | || ||||| ||||| |||||||| || Sbjct: 47697 aaacaatgcagggataatggggtgccctttcaagctatccaaggatgggattgagctgca 47756 Query: 513 attcgcaacgaatcat 528 ||||||||||||||| Sbjct: 47757 gttcgcaacgaatcat 47772 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 715 tccaaattagcaaatattctccacgcaaatgagctatccaggcgttttcagg 766 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 52423 tccaaattagcgaatattctccatgcaaatgaactatccaggcgttttcagg 52474 Score = 73.8 bits (37), Expect = 1e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 535 catttcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggt 594 |||||||||||||||||||| || || |||||||||||| | || || || ||||| ||| Sbjct: 50920 catttcttgctgacaaatctccttctcgacaagatgaaagccacggctaaagagactggt 50979 Query: 595 gtgcagggcaggatcgtaaac 615 |||||||||||||| ||||| Sbjct: 50980 ttgcagggcaggatcataaac 51000 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 702 tgcatacgcacactccaaattagcaaatattctccacgcaaatgagctatccaggcgttt 761 |||||| ||||| ||||||||||| |||||||| || |||||||||||| | | |||||| Sbjct: 48123 tgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgttt 48182 Query: 762 tcagg 766 ||||| Sbjct: 48183 tcagg 48187 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 457 aatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctacaattc 516 ||||||||| ||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 50734 aatgcaggggtaatgtcctgcccttttggactatccaaagatgggattgagcttcaattt 50793 Query: 517 gcaacgaatcatcttgg 533 |||||||||||| |||| Sbjct: 50794 gcaacgaatcatgttgg 50810 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 760 tttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctggaatcatcggaacc 819 ||||||||||||||||| |||||||||| ||||| ||||| |||||| | |||| ||| Sbjct: 52669 tttcaggaagaaggatgcaatctgactgcaaattccctgcatcctggagtaatcgccacc 52728 Query: 820 aacatcgttcgctacatcacgacaaacagt 849 ||| || |||| ||||| |||||||||| Sbjct: 52729 aacctccctcgccacatcctgacaaacagt 52758 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 761 ttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctgga 807 ||||||||||||||||| || ||||||| ||||| ||||| |||||| Sbjct: 48454 ttcaggaagaaggatgtaatttgactgcaaattccctgcatcctgga 48500 Score = 46.1 bits (23), Expect = 0.30 Identities = 38/43 (88%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacagg 221 |||||||| | ||||||| ||| ||||| |||||||||||||| Sbjct: 46770 ccgccggcgtagacgccacccacctcaccgccatcgtcacagg 46812 Score = 46.1 bits (23), Expect = 0.30 Identities = 47/55 (85%) Strand = Plus / Plus Query: 326 agagcctcgctgaagaggtcccgagctcgaagctccatgtcatggagatggatct 380 ||||| |||| || ||||||||| | || | |||||| ||||||||||||||||| Sbjct: 47018 agagcatcgcggaggaggtcccggggtccaggctccacgtcatggagatggatct 47072 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 48796 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 48855 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 48856 aaatacttcgc 48866
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 204 bits (103), Expect = 6e-49 Identities = 202/235 (85%) Strand = Plus / Plus Query: 218 caggggcaacaaatggcattggcaaggagacggccagagttcttgcactgaggggagcaa 277 |||| |||||||||||||| || |||||||| || || || |||||||| ||||||||| Sbjct: 4078723 caggtgcaacaaatggcataggaaaggagacagctagggtccttgcactaaggggagcag 4078782 Query: 278 acgtgatcataccagcaaggacgctcgagagtggcatgaaggtgaaagagagcctcgctg 337 | |||||| ||||||||||||| || ||||||||||||||||||||| ||||||| || | Sbjct: 4078783 aggtgatcttaccagcaaggacactggagagtggcatgaaggtgaaacagagccttgcag 4078842 Query: 338 aagaggtcccgagctcgaagctccatgtcatggagatggatctgagctcccttgactctg 397 | || |||| ||||| |||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 4078843 aggaaatccccagctcaaagctccatgtcatggagatggatcttagctccctcgactccg 4078902 Query: 398 ttcgcagcttcgcgggctccttcaactcctcgcataagcatctgaacgtcctcat 452 ||||||||||||| || |||||||| || ||| |||||||||||||||||| Sbjct: 4078903 ttcgcagcttcgcaaaatcgttcaactcgtcttataggcatctgaacgtcctcat 4078957 Score = 89.7 bits (45), Expect = 2e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 535 catttcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggt 594 ||||||||||| ||||||||||| || |||||||||||||| || || | | ||||||| Sbjct: 4076201 catttcttgcttacaaatcttctgctcgacaagatgaaatcgacggctaggaagaccggc 4076260 Query: 595 gtgcagggcaggatcgtaaacctagcttcaacagctcatagaagaagtgatggcaacggc 654 ||||||||||||||||| ||| || | || | || || | ||||||||||| || Sbjct: 4076261 gtgcagggcaggatcgtgaacgtatcgtctattgcgcacaagagaagtgatggttcttgc 4076320 Query: 655 tttgatctgaacaagctaaacgacaagtc 683 ||||||||||||||||||||||| ||||| Sbjct: 4076321 tttgatctgaacaagctaaacgataagtc 4076349 Score = 81.8 bits (41), Expect = 6e-12 Identities = 125/153 (81%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 ||||||||||| || | ||||||| | ||||||||||||| |||| |||||||||| Sbjct: 4081307 cagggagctgcgacgaactgttatctagcattgcatcctggattgaaggacgtgtccggc 4081366 Query: 961 aaatacttcgctggttgcaacgaggcgacaccaacgcccgtcgcaagagatgcagagctg 1020 |||||||| || | |||||||| || || || ||| | || ||||||||||||||||| Sbjct: 4081367 aaatactttgccgactgcaacgaagctacgccgacggctgttgcaagagatgcagagcta 4081426 Query: 1021 gccaagagcctgtgggcattcagtgaagaactt 1053 || |||| ||||||| ||||||||||||||| Sbjct: 4081427 gcaaagaagctgtgggagttcagtgaagaactt 4081459 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 453 aaacaatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctaca 512 |||||||||||||||||||| ||||||||| | || ||||| ||||| |||||||| || Sbjct: 4076035 aaacaatgcagggataatggggtgccctttcaagctatccaaggatgggattgagctgca 4076094 Query: 513 attcgcaacgaatcat 528 ||||||||||||||| Sbjct: 4076095 gttcgcaacgaatcat 4076110 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 715 tccaaattagcaaatattctccacgcaaatgagctatccaggcgttttcagg 766 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||| Sbjct: 4080761 tccaaattagcgaatattctccatgcaaatgaactatccaggcgttttcagg 4080812 Score = 73.8 bits (37), Expect = 1e-09 Identities = 70/81 (86%) Strand = Plus / Plus Query: 535 catttcttgctgacaaatcttctactagacaagatgaaatcaactgccaaggagaccggt 594 |||||||||||||||||||| || || |||||||||||| | || || || ||||| ||| Sbjct: 4079258 catttcttgctgacaaatctccttctcgacaagatgaaagccacggctaaagagactggt 4079317 Query: 595 gtgcagggcaggatcgtaaac 615 |||||||||||||| ||||| Sbjct: 4079318 ttgcagggcaggatcataaac 4079338 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 702 tgcatacgcacactccaaattagcaaatattctccacgcaaatgagctatccaggcgttt 761 |||||| ||||| ||||||||||| |||||||| || |||||||||||| | | |||||| Sbjct: 4076461 tgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgttt 4076520 Query: 762 tcagg 766 ||||| Sbjct: 4076521 tcagg 4076525 Score = 65.9 bits (33), Expect = 3e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 457 aatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctacaattc 516 ||||||||| ||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 4079072 aatgcaggggtaatgtcctgcccttttggactatccaaagatgggattgagcttcaattt 4079131 Query: 517 gcaacgaatcatcttgg 533 |||||||||||| |||| Sbjct: 4079132 gcaacgaatcatgttgg 4079148 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 760 tttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctggaatcatcggaacc 819 ||||||||||||||||| |||||||||| ||||| ||||| |||||| | |||| ||| Sbjct: 4081007 tttcaggaagaaggatgcaatctgactgcaaattccctgcatcctggagtaatcgccacc 4081066 Query: 820 aacatcgttcgctacatcacgacaaacagt 849 ||| || |||| ||||| |||||||||| Sbjct: 4081067 aacctccctcgccacatcctgacaaacagt 4081096 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 761 ttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctgga 807 ||||||||||||||||| || ||||||| ||||| ||||| |||||| Sbjct: 4076792 ttcaggaagaaggatgtaatttgactgcaaattccctgcatcctgga 4076838 Score = 46.1 bits (23), Expect = 0.30 Identities = 38/43 (88%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacagg 221 |||||||| | ||||||| ||| ||||| |||||||||||||| Sbjct: 4075108 ccgccggcgtagacgccacccacctcaccgccatcgtcacagg 4075150 Score = 46.1 bits (23), Expect = 0.30 Identities = 47/55 (85%) Strand = Plus / Plus Query: 326 agagcctcgctgaagaggtcccgagctcgaagctccatgtcatggagatggatct 380 ||||| |||| || ||||||||| | || | |||||| ||||||||||||||||| Sbjct: 4075356 agagcatcgcggaggaggtcccggggtccaggctccacgtcatggagatggatct 4075410 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 4077134 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 4077193 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 4077194 aaatacttcgc 4077204
>dbj|AK065928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J03, full insert sequence Length = 2156 Score = 79.8 bits (40), Expect = 2e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 453 aaacaatgcagggataatggcctgccctttccatctgtccaaagatggcattgagctaca 512 |||||||||||||||||||| ||||||||| | || ||||| ||||| |||||||| || Sbjct: 973 aaacaatgcagggataatggggtgccctttcaagctatccaaggatgggattgagctgca 1032 Query: 513 attcgcaacgaatcat 528 ||||||||||||||| Sbjct: 1033 gttcgcaacgaatcat 1048 Score = 67.9 bits (34), Expect = 8e-08 Identities = 160/202 (79%) Strand = Plus / Plus Query: 179 ccgccggcatcgacgccagccatctcacggccatcgtcacaggggcaacaaatggcattg 238 |||||||| | ||||||| ||| ||||| |||||||||||||| || || || || || | Sbjct: 147 ccgccggcgtagacgccacccacctcaccgccatcgtcacaggagcgacgaacgggatcg 206 Query: 239 gcaaggagacggccagagttcttgcactgaggggagcaaacgtgatcataccagcaagga 298 | | |||||||||| ||||||| || |||||| || | |||||||| || || |||| Sbjct: 207 ggagggagacggcccgagttctggcgaggaggggggcggaggtgatcatcccggcgagga 266 Query: 299 cgctcgagagtggcatgaaggtgaaagagagcctcgctgaagaggtcccgagctcgaagc 358 || | ||||| |||| |||||| ||||| |||| || ||||||||| | || | || Sbjct: 267 cgatggagagcggcaacgcggtgaagcagagcatcgcggaggaggtcccggggtccaggc 326 Query: 359 tccatgtcatggagatggatct 380 |||| ||||||||||||||||| Sbjct: 327 tccacgtcatggagatggatct 348 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 702 tgcatacgcacactccaaattagcaaatattctccacgcaaatgagctatccaggcgttt 761 |||||| ||||| ||||||||||| |||||||| || |||||||||||| | | |||||| Sbjct: 1280 tgcatatgcacattccaaattagctaatattcttcatgcaaatgagctagcaaagcgttt 1339 Query: 762 tcagg 766 ||||| Sbjct: 1340 tcagg 1344 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 653 gctttgatctgaacaagctaaacgacaagtc 683 ||||||||||||||||||||||||| ||||| Sbjct: 1138 gctttgatctgaacaagctaaacgataagtc 1168 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 761 ttcaggaagaaggatgtgatctgactgcgaattcgctgcaccctgga 807 ||||||||||||||||| || ||||||| ||||| ||||| |||||| Sbjct: 1611 ttcaggaagaaggatgtaatttgactgcaaattccctgcatcctgga 1657 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 1751 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 1810 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 1811 aaatacttcgc 1821
>ref|NM_152443.1| Homo sapiens retinol dehydrogenase 12 (all-trans/9-cis/11-cis) (RDH12), mRNA gb|BC025724.1| Homo sapiens retinol dehydrogenase 12 (all-trans/9-cis/11-cis), mRNA (cDNA clone MGC:34672 IMAGE:5199154), complete cds Length = 1780 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||||||||||| Sbjct: 318 ggcattggcaaggagacggccagag 342
>dbj|AK054835.1| Homo sapiens cDNA FLJ30273 fis, clone BRACE2002685, moderately similar to Homo sapiens androgen-regulated short-chain dehydrogenase/reductase 1 (ARSDR1) mRNA Length = 1667 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||||||||||| Sbjct: 260 ggcattggcaaggagacggccagag 284
>emb|AL049779.6|CNS00005 Human chromosome 14 DNA sequence BAC R-1012A1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188608 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||||||||||| Sbjct: 98056 ggcattggcaaggagacggccagag 98080
>gb|DQ307435.1| Juglans nigra microsatellite WAG256 sequence Length = 500 Score = 48.1 bits (24), Expect = 0.077 Identities = 36/40 (90%) Strand = Plus / Plus Query: 494 aagatggcattgagctacaattcgcaacgaatcatcttgg 533 ||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 418 aagatggaatagagctgcaattcgcaacaaatcatcttgg 457
>emb|CT829387.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN083L02, full insert sequence Length = 1351 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcct 939 ||||| |||||||| || |||||||||||||| |||||| Sbjct: 1077 cagggtgctgcaacgacatgttatgtggcattacatcct 1115
>emb|CT828850.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN089J08, full insert sequence Length = 536 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcctgataccaagggcgtgtccggc 960 |||||||||||||| || || ||| ||||| |||||||||| |||| || |||||| Sbjct: 152 cagggagctgcaaccacatgctatctggcactgcatcctgaactgaaggatgtctccggc 211 Query: 961 aaatacttcgc 971 ||||||||||| Sbjct: 212 aaatacttcgc 222
>ref|NM_001071832.1| Oryza sativa (japonica cultivar-group) Os10g0548000 (Os10g0548000) mRNA, complete cds Length = 1351 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcct 939 ||||| |||||||| || |||||||||||||| |||||| Sbjct: 1077 cagggtgctgcaacgacatgttatgtggcattacatcct 1115
>gb|AY488758.1| Pisum sativum short-chain dehydrogenase Tic32 mRNA, complete cds; nuclear gene for chloroplast product Length = 1123 Score = 46.1 bits (23), Expect = 0.30 Identities = 41/47 (87%) Strand = Plus / Plus Query: 451 ataaacaatgcagggataatggcctgccctttccatctgtccaaaga 497 ||||| |||||||| || ||||| ||||||||| | ||||||||||| Sbjct: 364 ataaataatgcaggaattatggcatgccctttcaagctgtccaaaga 410
>gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, complete sequence Length = 219013 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1180 taaactgccaaaaaagaaaatca 1202 ||||||||||||||||||||||| Sbjct: 117667 taaactgccaaaaaagaaaatca 117689
>dbj|AK068549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156B05, full insert sequence Length = 1352 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatgtggcattgcatcct 939 ||||| |||||||| || |||||||||||||| |||||| Sbjct: 1078 cagggtgctgcaacgacatgttatgtggcattacatcct 1116
>emb|CU012042.6| M.truncatula DNA sequence from clone MTH2-25G4 on chromosome 3, complete sequence Length = 124442 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1185 tgccaaaaaagaaaatcaatcattaa 1210 |||||||| ||||||||||||||||| Sbjct: 71246 tgccaaaacagaaaatcaatcattaa 71271
>gb|AC121896.3| Mus musculus BAC clone RP24-159J17 from chromosome 8, complete sequence Length = 146143 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1181 aaactgccaaaaaagaaaatcaatca 1206 |||||||||||||| ||||||||||| Sbjct: 86423 aaactgccaaaaaacaaaatcaatca 86448
>gb|AC126782.23| Medicago truncatula clone mth2-14p11, complete sequence Length = 135659 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1185 tgccaaaaaagaaaatcaatcattaa 1210 |||||||| ||||||||||||||||| Sbjct: 32801 tgccaaaacagaaaatcaatcattaa 32826
>dbj|AK149214.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120494I08 product:Warning: possibly chimeric clone, full insert sequence Length = 2329 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1185 tgccaaaaaagaaaatcaatca 1206 |||||||||||||||||||||| Sbjct: 1498 tgccaaaaaagaaaatcaatca 1519
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 902 agggagctgcaactacctgttatgtggcattgcatcct 939 |||| |||||||| || |||||||||||||| |||||| Sbjct: 143008 agggtgctgcaacgacatgttatgtggcattacatcct 143045
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 902 agggagctgcaactacctgttatgtggcattgcatcct 939 |||| |||||||| || |||||||||||||| |||||| Sbjct: 20921383 agggtgctgcaacgacatgttatgtggcattacatcct 20921346
>gb|AC124750.5| Mus musculus BAC clone RP23-273A20 from 8, complete sequence Length = 215042 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1181 aaactgccaaaaaagaaaatcaatca 1206 |||||||||||||| ||||||||||| Sbjct: 196868 aaactgccaaaaaacaaaatcaatca 196843
>emb|AL772293.7| Mouse DNA sequence from clone RP23-57D24 on chromosome 4, complete sequence Length = 251930 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1185 tgccaaaaaagaaaatcaatca 1206 |||||||||||||||||||||| Sbjct: 45322 tgccaaaaaagaaaatcaatca 45343
>emb|CT829386.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA127A09, full insert sequence Length = 1253 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 907 gctgcaactacctgttatgtggcattgcatcct 939 |||||||| || |||||||||||||| |||||| Sbjct: 985 gctgcaacgacatgttatgtggcattacatcct 1017
>dbj|AK228293.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-73-L12 Length = 1679 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatg 925 |||||||| |||||||||||||||| Sbjct: 1288 cagggagcggcaactacctgttatg 1312
>gb|CP000393.1| Trichodesmium erythraeum IMS101, complete genome Length = 7750108 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1189 aaaaaagaaaatcaatcatta 1209 ||||||||||||||||||||| Sbjct: 6658633 aaaaaagaaaatcaatcatta 6658653
>ref|XM_001080897.1| PREDICTED: Rattus norvegicus retinol dehydrogenase 12 (predicted) (Rdh12_predicted), mRNA Length = 1102 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 260 ggcattggcaaggagacagccagag 284
>ref|XM_234334.4| PREDICTED: Rattus norvegicus retinol dehydrogenase 12 (predicted) (Rdh12_predicted), mRNA Length = 1287 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 445 ggcattggcaaggagacagccagag 469
>ref|XM_001108235.1| PREDICTED: Macaca mulatta similar to retinol dehydrogenase 12 (all-trans and 9-cis) (LOC711438), mRNA Length = 1729 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 |||||||||||||||||||| |||| Sbjct: 323 ggcattggcaaggagacggctagag 347
>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE Length = 131869 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1189 aaaaaagaaaatcaatcattaacac 1213 |||||| |||||||||||||||||| Sbjct: 52659 aaaaaaaaaaatcaatcattaacac 52635
>emb|CR847973.9| Zebrafish DNA sequence from clone DKEY-78P20 in linkage group 11, complete sequence Length = 116327 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 ggcaacaaatggcattggcaa 242 ||||||||||||||||||||| Sbjct: 60148 ggcaacaaatggcattggcaa 60128
>ref|NM_117212.3| Arabidopsis thaliana oxidoreductase (AT4G11410) mRNA, complete cds Length = 1304 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatg 925 |||||||| |||||||||||||||| Sbjct: 928 cagggagcggcaactacctgttatg 952
>gb|AC158527.2| Mus musculus BAC clone RP23-266E16 from chromosome 12, complete sequence Length = 218736 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 27684 ggcattggcaaggagacagccagag 27708
>gb|BC067213.1| Mus musculus retinol dehydrogenase 12, mRNA (cDNA clone IMAGE:5364453), partial cds Length = 2815 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 242 ggcattggcaaggagacagccagag 266
>ref|XM_547866.2| PREDICTED: Canis familiaris similar to retinol dehydrogenase 12 (all-trans and 9-cis) (LOC490744), mRNA Length = 912 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 109 ggcattggcaaggagacagccagag 133
>gb|BC016204.1| Mus musculus retinol dehydrogenase 12, mRNA (cDNA clone MGC:27665 IMAGE:4527851), complete cds Length = 1659 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 258 ggcattggcaaggagacagccagag 282
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1191 aaaagaaaatcaatcattaac 1211 ||||||||||||||||||||| Sbjct: 3236787 aaaagaaaatcaatcattaac 3236767
>dbj|AK164157.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630025M06 product:retinol dehydrogenase 12, full insert sequence Length = 1143 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 277 ggcattggcaaggagacagccagag 301
>ref|NM_030017.1| Mus musculus retinol dehydrogenase 12 (Rdh12), mRNA dbj|AK039233.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330001P15 product:CDNA FLJ30273 FIS, CLONE BRACE2002685, MODERATELY SIMILAR TO HOMO SAPIENS ANDROGEN-REGULATED SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 (ARSDR1) MRNA homolog [Homo sapiens], full insert sequence Length = 1675 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 276 ggcattggcaaggagacagccagag 300
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 atcgccgccggcatcgacgcc 195 ||||||||||||||||||||| Sbjct: 2128430 atcgccgccggcatcgacgcc 2128450
>gb|AC107056.5| Homo sapiens BAC clone RP11-464N24 from 4, complete sequence Length = 69917 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 ttggccatttcttgctgacaaatct 554 ||||||||||||| ||||||||||| Sbjct: 331 ttggccatttctttctgacaaatct 307
>dbj|AK020927.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930033N07 product:CDNA FLJ30273 FIS, CLONE BRACE2002685, MODERATELY SIMILAR TO HOMO SAPIENS ANDROGEN-REGULATED SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 (ARSDR1) MRNA homolog [Homo sapiens], full insert sequence Length = 1118 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 272 ggcattggcaaggagacagccagag 296
>gb|AC098679.3| Homo sapiens BAC clone RP11-597D13 from 4, complete sequence Length = 188513 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 ttggccatttcttgctgacaaatct 554 ||||||||||||| ||||||||||| Sbjct: 186844 ttggccatttctttctgacaaatct 186820
>emb|AL731553.12| Human DNA sequence from clone RP11-56M3 on chromosome 10 Contains a nudix (nucleoside diphosphate linked moiety X)-type pseudogene, complete sequence Length = 99089 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 913 actacctgttatgtggcattg 933 ||||||||||||||||||||| Sbjct: 34276 actacctgttatgtggcattg 34256
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 gacatcgccgccggcatcgac 192 ||||||||||||||||||||| Sbjct: 2146208 gacatcgccgccggcatcgac 2146188
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 901 cagggagctgcaactacctgttatg 925 |||||||| |||||||||||||||| Sbjct: 189537 cagggagcggcaactacctgttatg 189513
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 901 cagggagctgcaactacctgttatg 925 |||||||| |||||||||||||||| Sbjct: 17587 cagggagcggcaactacctgttatg 17563
>emb|CR352330.14| Mouse DNA sequence from clone RP23-374F1 on chromosome X, complete sequence Length = 82726 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1054 gtagaaagcagatcaaaatga 1074 ||||||||||||||||||||| Sbjct: 63998 gtagaaagcagatcaaaatga 64018
>emb|AL606782.10| Mouse DNA sequence from clone RP23-408H17 on chromosome 13 Contains the 3' end of a novel gene (4930401O12Rik), complete sequence Length = 21882 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1084 gtgtgctgtgattgtgtgcagtggc 1108 ||||||||||||||||||| ||||| Sbjct: 11807 gtgtgctgtgattgtgtgctgtggc 11783 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1084 gtgtgctgtgattgtgtgcagtggc 1108 ||||||||||||||||||| ||||| Sbjct: 11846 gtgtgctgtgattgtgtgctgtggc 11822
>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7, complete sequence Length = 163069 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1186 gccaaaaaagaaaatcaatca 1206 ||||||||||||||||||||| Sbjct: 144578 gccaaaaaagaaaatcaatca 144598
>dbj|AB028621.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUJ8 Length = 78921 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1181 aaactgccaaaaaagaaaatc 1201 ||||||||||||||||||||| Sbjct: 30781 aaactgccaaaaaagaaaatc 30801
>emb|BX828717.1|CNS0A3JU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1073 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 901 cagggagctgcaactacctgttatg 925 |||||||| |||||||||||||||| Sbjct: 777 cagggagcggcaactacctgttatg 801
>emb|BX005329.9| Zebrafish DNA sequence from clone DKEY-222F2, complete sequence Length = 186928 Score = 42.1 bits (21), Expect = 4.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1189 aaaaaagaaaatcaatcattaacacggaa 1217 |||||| ||||||||||||||||| |||| Sbjct: 44060 aaaaaaaaaaatcaatcattaacatggaa 44088
>gb|AC154585.2| Mus musculus BAC clone RP23-359K10 from 12, complete sequence Length = 198520 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcattggcaaggagacggccagag 256 ||||||||||||||||| ||||||| Sbjct: 166884 ggcattggcaaggagacagccagag 166908 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 197,107,350 Number of extensions: 11322057 Number of successful extensions: 219442 Number of sequences better than 10.0: 59 Number of HSP's gapped: 219417 Number of HSP's successfully gapped: 113 Length of query: 1249 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1226 Effective length of database: 18,503,978,556 Effective search space: 22685877709656 Effective search space used: 22685877709656 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)