ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf112j19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK060396:Os11g0162200 | 152 | 1e-37 | 2 | AK120450:Os02g0541700 | 105 | 1e-23 | 3 | AK062186:Os02g0541700 | 105 | 1e-23 | 4 | Os05g0185600:Os05g0185600 | 32 | 0.21 | 5 | AK070688:Os03g0222100 | 28 | 3.9 | 6 | AK121783:Os04g0455900 | 27 | 6.7 | 7 | AK100831:Os07g0577500 | 27 | 6.7 | 8 | AK063763:Os04g0455900 | 27 | 6.7 | 9 | AB018442:Os03g0752100 | 27 | 6.7 | 10 | AK099852:Os01g0187400 | 27 | 8.8 | 11 | Os01g0260500:Os01g0260500 | 27 | 8.9 |
|---|
>AK060396:Os11g0162200 | Length = 69 Score = 152 bits (385), Expect = 1e-37 Identities = 66/69 (95%), Positives = 67/69 (97%) Frame = +3 Query: 132 MADEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 311 MADEEPVDPKKYLEERCKPQCVKPLYEYEKC+KRVE DDTGHKHCTGQYFDYWSCIDKCV Sbjct: 1 MADEEPVDPKKYLEERCKPQCVKPLYEYEKCVKRVEKDDTGHKHCTGQYFDYWSCIDKCV 60 Query: 312 APKLFEKLK 338 APKL EKLK Sbjct: 61 APKLLEKLK 69
>AK120450:Os02g0541700 | Length = 69 Score = 105 bits (263), Expect = 1e-23 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = +3 Query: 132 MADEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 311 M+DEE DPK LE+R K +CV YEY+KC+KR+E D+TG KHCTGQYFDYW C+DK V Sbjct: 1 MSDEEVSDPKALLEDRSKAKCVYQWYEYQKCVKRIEDDETGQKHCTGQYFDYWKCVDKNV 60 Query: 312 APKLFEKLK 338 A KLF+ LK Sbjct: 61 AEKLFDSLK 69
>AK062186:Os02g0541700 | Length = 69 Score = 105 bits (263), Expect = 1e-23 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = +3 Query: 132 MADEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFDYWSCIDKCV 311 M+DEE DPK LE+R K +CV YEY+KC+KR+E D+TG KHCTGQYFDYW C+DK V Sbjct: 1 MSDEEVSDPKALLEDRSKAKCVYQWYEYQKCVKRIEDDETGQKHCTGQYFDYWKCVDKNV 60 Query: 312 APKLFEKLK 338 A KLF+ LK Sbjct: 61 AEKLFDSLK 69
>Os05g0185600:Os05g0185600 | Length = 1366 Score = 32.3 bits (72), Expect = 0.21 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Frame = -2 Query: 329 FKELWCYTFIDA*PIVKILPSAVLVPGIIGLNSLDTF----LILIQRLYTLW-LAPLLKI 165 F +L+ Y+ ID ++ +LP +L P G+N+L + + R+Y LW + L+ + Sbjct: 1277 FLQLYSYSMIDVLLVLFVLPLGILAPFPAGINALFSHGPRRSAGLARVYALWNITSLVNV 1336 Query: 164 LLGINRFLIRHGDYAVRAGGFCSW 93 ++ L+ + A R W Sbjct: 1337 IVAFACGLVHYKSSAKRHPSMQPW 1360
>AK070688:Os03g0222100 | Length = 638 Score = 28.1 bits (61), Expect = 3.9 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 457 KFMKSKHSHRTICRLVKYFNLNKVLAN-DQAHSLKVAPQYHFSFSKSFGATHLSMHDQ 287 +FM+ K TI L +YF+ + V A ++ L+V P YH+ F K + + HD+ Sbjct: 41 EFMQFKRKATTI--LEEYFSTDDVAATANELRELRV-PCYHYYFVKKLVSVAMDRHDR 95
>AK121783:Os04g0455900 | Length = 386 Score = 27.3 bits (59), Expect = 6.7 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 475 DSCSYYKFMKS-KHSHRTICRLVKYFNLNKVLANDQAHSLKVAPQYHFSFSKSFGATHLS 299 D C F++S K C + + +NKV N +HF+ KSF ++ Sbjct: 184 DQCKREGFLQSIKDEEGEGCNIYGFLEVNKVAGN-----------FHFAPGKSFQKANVH 232 Query: 298 MHD 290 +HD Sbjct: 233 VHD 235
>AK100831:Os07g0577500 | Length = 353 Score = 27.3 bits (59), Expect = 6.7 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 138 DEEPVDPKKYLEERCKPQCVKPLYEYEKCIKRVEADDTGHKHCTGQYFD-YWSCIDKCVA 314 DEE PK+YL+E K ++ + EK + E +D + TGQY D ++C Sbjct: 163 DEEEKTPKQYLDEDQK--TLQQCQDEEKAPNQYEDED----NTTGQYQDGEQKTAEQCEE 216 Query: 315 PKLFEK 332 K EK Sbjct: 217 EKTSEK 222
>AK063763:Os04g0455900 | Length = 299 Score = 27.3 bits (59), Expect = 6.7 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -3 Query: 475 DSCSYYKFMKS-KHSHRTICRLVKYFNLNKVLANDQAHSLKVAPQYHFSFSKSFGATHLS 299 D C F++S K C + + +NKV N +HF+ KSF ++ Sbjct: 97 DQCKREGFLQSIKDEEGEGCNIYGFLEVNKVAGN-----------FHFAPGKSFQKANVH 145 Query: 298 MHD 290 +HD Sbjct: 146 VHD 148
>AB018442:Os03g0752100 | Length = 1137 Score = 27.3 bits (59), Expect = 6.7 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -3 Query: 478 RDSCSYYKFMKSKHSHRTICRLVKYFNLNKVLANDQAHSLKVAPQYHFSFSKSFGATHLS 299 R +CS +SKHS R + + + Q H+ Q HF +S S GA + S Sbjct: 9 RATCSRSSSARSKHSARVVA---------QTPMDAQLHAEFEGSQRHFDYSSSVGAANRS 59
>AK099852:Os01g0187400 | Length = 1431 Score = 26.9 bits (58), Expect = 8.8 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = -2 Query: 329 FKELWCYTFIDA*PIVKILPSAVLVPGIIGLNSLDTF----LILIQRLYTLW 186 F +L+ Y+ D ++ +LP +L P G+N+L + + R+Y LW Sbjct: 1296 FLQLYSYSMADVLLVLFVLPLGILSPFPAGINALFSHGPRRSAGLARVYALW 1347
>Os01g0260500:Os01g0260500 | Length = 1292 Score = 26.9 bits (58), Expect = 8.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 348 PNIISAFQRALVLHIYRCMTNSQNIAQCSACA 253 PN IS+ LH+Y C+ + N+ S CA Sbjct: 611 PNCISSLHNLQTLHLYNCI--NLNVLPMSVCA 640 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,268,618 Number of extensions: 326628 Number of successful extensions: 749 Number of sequences better than 10.0: 11 Number of HSP's gapped: 747 Number of HSP's successfully gapped: 11 Length of query: 183 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 89 Effective length of database: 11,636,001 Effective search space: 1035604089 Effective search space used: 1035604089 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
