| Clone Name | FLbaf107e07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828565.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105M01, full insert sequence Length = 1256 Score = 603 bits (304), Expect = e-169 Identities = 544/624 (87%) Strand = Plus / Plus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 293 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 352 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 353 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 412 Query: 416 caagactatctttcagcaattcgatgaagattccaatggtgaaattgataaagaagagct 475 ||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| | Sbjct: 413 caagatcatcttcgagcaattcgatgaagattccaatggcgaaatagataaacaagaatt 472 Query: 476 caagaattgctttcagaagctggaaatctcattcacagaggaggagataagtgatctctt 535 ||| |||| || || ||| ||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 473 gaagcattgtttccaaaagttggaaatttcattcacagaggaggagataaatgacctctt 532 Query: 536 tgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttcattgtctttct 595 ||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 533 tgaagcttgtgatataaatgaagacatgggcatgaagttcaatgagttcatcgtctttct 592 Query: 596 gtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaacaaagatgggatt 655 |||||| ||||||| ||||| || || |||| ||||||||||| | ||||||||||| Sbjct: 593 gtgcctcatttatctgctcaacgaaccagctgtgtcagaagcaaagattaagatgggatt 652 Query: 656 aggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttcttggataagaa 715 |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 653 aggaaatcttgaggcaacttttgagaccttggttgatgcatttgtttttttggataagaa 712 Query: 716 caaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgagagcataccagg 775 ||| ||||| ||||| |||||||| |||||| ||||| |||| ||||||| | |||| Sbjct: 713 caaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgagactgcaacagg 772 Query: 776 ggaacgctctgctggccgtatagccatgaaaagatttgaggagatggattgggacaagaa 835 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 773 ggaacgctcttctgggcgtatagccatgaaaagatttgaggaaatggactgggacaagaa 832 Query: 836 cgggatggttaccttcaaggaatttctgtttgcattcactcgctgggttgggataggcga 895 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct: 833 tggaatggtgaccttcaaagaatttctgtttgcattcactcgctgggttgggattgacga 892 Query: 896 aaacgaggacgaagatgaatgaat 919 ||| |||||||| |||||||||| Sbjct: 893 aaatgaggacgacaatgaatgaat 916
>ref|NM_001064581.1| Oryza sativa (japonica cultivar-group) Os06g0609600 (Os06g0609600) mRNA, complete cds Length = 1179 Score = 603 bits (304), Expect = e-169 Identities = 544/624 (87%) Strand = Plus / Plus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 222 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 281 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 282 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 341 Query: 416 caagactatctttcagcaattcgatgaagattccaatggtgaaattgataaagaagagct 475 ||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| | Sbjct: 342 caagatcatcttcgagcaattcgatgaagattccaatggcgaaatagataaacaagaatt 401 Query: 476 caagaattgctttcagaagctggaaatctcattcacagaggaggagataagtgatctctt 535 ||| |||| || || ||| ||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 402 gaagcattgtttccaaaagttggaaatttcattcacagaggaggagataaatgacctctt 461 Query: 536 tgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttcattgtctttct 595 ||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 462 tgaagcttgtgatataaatgaagacatgggcatgaagttcaatgagttcatcgtctttct 521 Query: 596 gtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaacaaagatgggatt 655 |||||| ||||||| ||||| || || |||| ||||||||||| | ||||||||||| Sbjct: 522 gtgcctcatttatctgctcaacgaaccagctgtgtcagaagcaaagattaagatgggatt 581 Query: 656 aggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttcttggataagaa 715 |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 582 aggaaatcttgaggcaacttttgagaccttggttgatgcatttgtttttttggataagaa 641 Query: 716 caaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgagagcataccagg 775 ||| ||||| ||||| |||||||| |||||| ||||| |||| ||||||| | |||| Sbjct: 642 caaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgagactgcaacagg 701 Query: 776 ggaacgctctgctggccgtatagccatgaaaagatttgaggagatggattgggacaagaa 835 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 702 ggaacgctcttctgggcgtatagccatgaaaagatttgaggaaatggactgggacaagaa 761 Query: 836 cgggatggttaccttcaaggaatttctgtttgcattcactcgctgggttgggataggcga 895 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct: 762 tggaatggtgaccttcaaagaatttctgtttgcattcactcgctgggttgggattgacga 821 Query: 896 aaacgaggacgaagatgaatgaat 919 ||| |||||||| |||||||||| Sbjct: 822 aaatgaggacgacaatgaatgaat 845
>dbj|AK072533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127M12, full insert sequence Length = 1182 Score = 603 bits (304), Expect = e-169 Identities = 544/624 (87%) Strand = Plus / Plus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 225 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 284 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 285 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 344 Query: 416 caagactatctttcagcaattcgatgaagattccaatggtgaaattgataaagaagagct 475 ||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| | Sbjct: 345 caagatcatcttcgagcaattcgatgaagattccaatggcgaaatagataaacaagaatt 404 Query: 476 caagaattgctttcagaagctggaaatctcattcacagaggaggagataagtgatctctt 535 ||| |||| || || ||| ||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 405 gaagcattgtttccaaaagttggaaatttcattcacagaggaggagataaatgacctctt 464 Query: 536 tgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttcattgtctttct 595 ||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 465 tgaagcttgtgatataaatgaagacatgggcatgaagttcaatgagttcatcgtctttct 524 Query: 596 gtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaacaaagatgggatt 655 |||||| ||||||| ||||| || || |||| ||||||||||| | ||||||||||| Sbjct: 525 gtgcctcatttatctgctcaacgaaccagctgtgtcagaagcaaagattaagatgggatt 584 Query: 656 aggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttcttggataagaa 715 |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 585 aggaaatcttgaggcaacttttgagaccttggttgatgcatttgtttttttggataagaa 644 Query: 716 caaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgagagcataccagg 775 ||| ||||| ||||| |||||||| |||||| ||||| |||| ||||||| | |||| Sbjct: 645 caaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgagactgcaacagg 704 Query: 776 ggaacgctctgctggccgtatagccatgaaaagatttgaggagatggattgggacaagaa 835 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 705 ggaacgctcttctgggcgtatagccatgaaaagatttgaggaaatggactgggacaagaa 764 Query: 836 cgggatggttaccttcaaggaatttctgtttgcattcactcgctgggttgggataggcga 895 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct: 765 tggaatggtgaccttcaaagaatttctgtttgcattcactcgctgggttgggattgacga 824 Query: 896 aaacgaggacgaagatgaatgaat 919 ||| |||||||| |||||||||| Sbjct: 825 aaatgaggacgacaatgaatgaat 848
>gb|BT014680.1| Oryza sativa AK099872 mRNA sequence Length = 672 Score = 599 bits (302), Expect = e-168 Identities = 542/622 (87%) Strand = Plus / Plus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 51 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 110 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 111 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 170 Query: 416 caagactatctttcagcaattcgatgaagattccaatggtgaaattgataaagaagagct 475 ||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| | Sbjct: 171 caagatcatcttcgagcaattcgatgaagattccaatggcgaaatagataaacaagaatt 230 Query: 476 caagaattgctttcagaagctggaaatctcattcacagaggaggagataagtgatctctt 535 ||| |||| || || ||| ||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 231 gaagcattgtttccaaaagttggaaatttcattcacagaggaggagataaatgacctctt 290 Query: 536 tgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttcattgtctttct 595 ||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 291 tgaagcttgtgatataaatgaagacatgggcatgaagttcaatgagttcatcgtctttct 350 Query: 596 gtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaacaaagatgggatt 655 |||||| ||||||| ||||| || || |||| ||||||||||| | ||||||||||| Sbjct: 351 gtgcctcatttatctgctcaacgaaccagctgtgtcagaagcaaagattaagatgggatt 410 Query: 656 aggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttcttggataagaa 715 |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 411 aggaaatcttgaggcaacttttgagaccttggttgatgcatttgtttttttggataagaa 470 Query: 716 caaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgagagcataccagg 775 ||| ||||| ||||| |||||||| |||||| ||||| |||| ||||||| | |||| Sbjct: 471 caaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgagactgcaacagg 530 Query: 776 ggaacgctctgctggccgtatagccatgaaaagatttgaggagatggattgggacaagaa 835 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 531 ggaacgctcttctgggcgtatagccatgaaaagatttgaggaaatggactgggacaagaa 590 Query: 836 cgggatggttaccttcaaggaatttctgtttgcattcactcgctgggttgggataggcga 895 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct: 591 tggaatggtgaccttcaaagaatttctgtttgcattcactcgctgggttgggattgacga 650 Query: 896 aaacgaggacgaagatgaatga 917 ||| |||||||| |||||||| Sbjct: 651 aaatgaggacgacaatgaatga 672
>dbj|AK099872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G10, full insert sequence Length = 1156 Score = 595 bits (300), Expect = e-166 Identities = 543/624 (87%) Strand = Plus / Plus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 223 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 282 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 283 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 342 Query: 416 caagactatctttcagcaattcgatgaagattccaatggtgaaattgataaagaagagct 475 ||||| ||||| ||||||||||||||||||||||||| ||||| |||||| |||| | Sbjct: 343 caagatcatcttcgagcaattcgatgaagattccaatggcgaaatagataaacaagaatt 402 Query: 476 caagaattgctttcagaagctggaaatctcattcacagaggaggagataagtgatctctt 535 ||| |||| || || ||| ||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 403 gaagcattgtttccaaaagttggaaatttcattcacagaggaggagataaatgacctctt 462 Query: 536 tgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttcattgtctttct 595 ||||||||| || ||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 463 tgaagcttgtgatataaatgaagacatgggcatgaagttcaatgagttcatcgtctttct 522 Query: 596 gtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaacaaagatgggatt 655 |||||| ||||||| ||||| || || ||| ||||||||||| | ||||||||||| Sbjct: 523 gtgcctcatttatctgctcaacgaaccaactgtgtcagaagcaaagattaagatgggatt 582 Query: 656 aggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttcttggataagaa 715 |||| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 583 aggaaatcttgaggcaacttttgagaccttggttgatgcatttgtttttttggataagaa 642 Query: 716 caaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgagagcataccagg 775 ||| ||||| ||||| |||||||| |||||| ||||| |||| ||||||| | |||| Sbjct: 643 caaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgagactgcaacagg 702 Query: 776 ggaacgctctgctggccgtatagccatgaaaagatttgaggagatggattgggacaagaa 835 |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 703 ggaacgctcttctgggcgtatagccatgaaaagatttgaggaaatggactgggacaagaa 762 Query: 836 cgggatggttaccttcaaggaatttctgtttgcattcactcgctgggttgggataggcga 895 || ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct: 763 tggaatggtgaccttcaaagaatttctgtttgcattcactcgctgggttgggattgacga 822 Query: 896 aaacgaggacgaagatgaatgaat 919 ||| |||||||| |||||||||| Sbjct: 823 aaatgaggacgacaatgaatgaat 846
>gb|AY105775.1| Zea mays PCO145926 mRNA sequence Length = 1157 Score = 511 bits (258), Expect = e-141 Identities = 504/586 (86%) Strand = Plus / Plus Query: 328 agcagagagcgtcgcatggaacttcggtcaagtcgttcaacagtattatcatgaagttcg 387 |||||||||| ||||||||||| || | || |||||| | || ||||||||||||||| Sbjct: 319 agcagagagcatcgcatggaacctcactgaaatcgttcgatagcattatcatgaagttcc 378 Query: 388 cgaaaatcgacaagggcttgagaaaatgcaagactatctttcagcaattcgatgaagatt 447 | ||||| ||| || | || |||||||||||||||||||| | || || |||||||||| Sbjct: 379 ccaaaatagacgagagtttcagaaaatgcaagactatcttcgaacagtttgatgaagatt 438 Query: 448 ccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctggaaatctcat 507 | ||||| ||||| |||||||| || || || |||| ||||| |||||||||||||||| Sbjct: 439 caaatggcgaaatagataaagaggaactgaaacattgttttcaaaagctggaaatctcat 498 Query: 508 tcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaagatatgggca 567 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 499 tcacagaggaggagatatgtgatctctttgaagcttgcgatataaatgaagatatgggca 558 Query: 568 tgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaatgaccctgctg 627 || || ||| |||||||||||||||||||||||||| |||||||||||||| | |||| Sbjct: 559 cgaggttcaacgagttcattgtctttctgtgccttgtctatcttctcaatgaagcagctg 618 Query: 628 catcagaagcaaaaacaaagatgggattaggagatcttgagtcaacttttgagaccttgg 687 | |||||||| | |||||||||| ||||| |||||||| |||| || |||||||||| Sbjct: 619 tcttggaagcaaagataaagatgggactaggaaatcttgaggcaaccttcgagaccttgg 678 Query: 688 ttgatgcatttgtcttcttggataagaacaaggatgggtatgtgagtaaggatgagatga 747 ||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 679 ttgatgcgtttgtcttcttggataagaataaagatgggtatgtgagcaaggatgagatga 738 Query: 748 ttcaagcaataaatgagagcataccaggggaacgctctgctggccgtatagccatgaaaa 807 | ||||||||||| |||| || |||| || |||||| |||| | |||||||||||||| Sbjct: 739 tccaagcaataaacgagaccacgacaggagagcgctcttctgggcctatagccatgaaaa 798 Query: 808 gatttgaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttg 867 |||||||||| ||||| |||||||||||||| ||||| || |||||||| || ||||||| Sbjct: 799 gatttgaggaaatggactgggacaagaacggaatggtgacattcaaggagttcctgtttg 858 Query: 868 cattcactcgctgggttgggataggcgaaaacgaggacgaagatga 913 | |||||||||||||| || || | ||||| ||||| |||||||| Sbjct: 859 ccttcactcgctgggtaggaattgatgaaaatgaggatgaagatga 904
>ref|NM_001052740.1| Oryza sativa (japonica cultivar-group) Os02g0198200 (Os02g0198200) mRNA, complete cds Length = 1222 Score = 295 bits (149), Expect = 2e-76 Identities = 446/545 (81%) Strand = Plus / Plus Query: 345 ggaacttcggtcaagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggc 404 |||||||| || || || ||||| ||| |||| ||||||||| | ||||| ||| || | Sbjct: 298 ggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagt 357 Query: 405 ttgagaaaatgcaagactatctttcagcaattcgatgaagattccaatggtgaaattgat 464 |||||||| |||| | ||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 358 ttgagaaactgcagaattatctttcagcaatttgatgaagattccaatggtgaaatagat 417 Query: 465 aaagaagagctcaagaattgctttcagaagctggaaatctcattcacagaggaggagata 524 || |||| || ||| |||| ||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 418 caacaagaacttaagcattgttttcaaaagttggatatctcattcacagatgaggagata 477 Query: 525 agtgatctctttgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttc 584 | || || ||| | || || ||||| ||||| | ||||||||||| | ||||||||| Sbjct: 478 aaagacctatttcaggcatgtgacatttatgaaaacatgggcatgaaatttaatgagttc 537 Query: 585 attgtctttctgtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaaca 644 |||||||| |||||||||||||||||||| ||||| || || |||||||||| || | Sbjct: 538 attgtcttcctgtgccttgtttatcttctgaatgatccgcttgtgtcagaagcaagaaaa 597 Query: 645 aagatgggattaggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttc 704 | |||||| |||| |||||| ||||||| ||||| ||||||||| |||| |||||| Sbjct: 598 agaatgggactaggtagtcttgaaccaactttcgagacattggttgattcattcgtcttc 657 Query: 705 ttggataagaacaaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgag 764 ||||| || ||||| ||||||||||| || ||| |||||||||| ||||| || || || Sbjct: 658 ttggacaaaaacaaagatgggtatgtcagcaagaatgagatgatacaagcgatcaacgaa 717 Query: 765 agcataccaggggaacgctctgctggccgtatagccatgaaaagatttgaggagatggat 824 | ||| ||| ||||||||| |||| || |||| |||||||||||||||||| |||||| Sbjct: 718 accatcggaggagaacgctcttctgggcggataggcatgaaaagatttgaggaaatggat 777 Query: 825 tgggacaagaacgggatggttaccttcaaggaatttctgtttgcattcactcgctgggtt 884 ||||||||||| || | ||| ||||||||||| || || || || || ||||| ||||| Sbjct: 778 tgggacaagaatggaacggtgaccttcaaggagttcctcttcgcttttactcgttgggtg 837 Query: 885 gggat 889 ||||| Sbjct: 838 gggat 842
>dbj|AK058544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B12, full insert sequence Length = 1222 Score = 295 bits (149), Expect = 2e-76 Identities = 446/545 (81%) Strand = Plus / Plus Query: 345 ggaacttcggtcaagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggc 404 |||||||| || || || ||||| ||| |||| ||||||||| | ||||| ||| || | Sbjct: 298 ggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagt 357 Query: 405 ttgagaaaatgcaagactatctttcagcaattcgatgaagattccaatggtgaaattgat 464 |||||||| |||| | ||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 358 ttgagaaactgcagaattatctttcagcaatttgatgaagattccaatggtgaaatagat 417 Query: 465 aaagaagagctcaagaattgctttcagaagctggaaatctcattcacagaggaggagata 524 || |||| || ||| |||| ||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 418 caacaagaacttaagcattgttttcaaaagttggatatctcattcacagatgaggagata 477 Query: 525 agtgatctctttgaagcttgcgacataaatgaagatatgggcatgaagtacaatgagttc 584 | || || ||| | || || ||||| ||||| | ||||||||||| | ||||||||| Sbjct: 478 aaagacctatttcaggcatgtgacatttatgaaaacatgggcatgaaatttaatgagttc 537 Query: 585 attgtctttctgtgccttgtttatcttctcaatgaccctgctgcatcagaagcaaaaaca 644 |||||||| |||||||||||||||||||| ||||| || || |||||||||| || | Sbjct: 538 attgtcttcctgtgccttgtttatcttctgaatgatccgcttgtgtcagaagcaagaaaa 597 Query: 645 aagatgggattaggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttc 704 | |||||| |||| |||||| ||||||| ||||| ||||||||| |||| |||||| Sbjct: 598 agaatgggactaggtagtcttgaaccaactttcgagacattggttgattcattcgtcttc 657 Query: 705 ttggataagaacaaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgag 764 ||||| || ||||| ||||||||||| || ||| |||||||||| ||||| || || || Sbjct: 658 ttggacaaaaacaaagatgggtatgtcagcaagaatgagatgatacaagcgatcaacgaa 717 Query: 765 agcataccaggggaacgctctgctggccgtatagccatgaaaagatttgaggagatggat 824 | ||| ||| ||||||||| |||| || |||| |||||||||||||||||| |||||| Sbjct: 718 accatcggaggagaacgctcttctgggcggataggcatgaaaagatttgaggaaatggat 777 Query: 825 tgggacaagaacgggatggttaccttcaaggaatttctgtttgcattcactcgctgggtt 884 ||||||||||| || | ||| ||||||||||| || || || || || ||||| ||||| Sbjct: 778 tgggacaagaatggaacggtgaccttcaaggagttcctcttcgcttttactcgttgggtg 837 Query: 885 gggat 889 ||||| Sbjct: 838 gggat 842
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 192 bits (97), Expect = 2e-45 Identities = 151/169 (89%) Strand = Plus / Minus Query: 645 aagatgggattaggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttc 704 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 23890472 aagatgggattaggaaatcttgaggcaacttttgagaccttggttgatgcatttgttttt 23890413 Query: 705 ttggataagaacaaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgag 764 |||||||||||||| ||||| ||||| |||||||| |||||| ||||| |||| |||||| Sbjct: 23890412 ttggataagaacaaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgag 23890353 Query: 765 agcataccaggggaacgctctgctggccgtatagccatgaaaagatttg 813 | | |||||||||||||| |||| |||||||||||||||||||||| Sbjct: 23890352 actgcaacaggggaacgctcttctgggcgtatagccatgaaaagatttg 23890304 Score = 184 bits (93), Expect = 5e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctg 497 ||||||||||||||||| ||||| |||||| |||| | ||| |||| || || ||| || Sbjct: 23890930 gatgaagattccaatggcgaaatagataaacaagaattgaagcattgtttccaaaagttg 23890871 Query: 498 gaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaa 557 ||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 23890870 gaaatttcattcacagaggaggagataaatgacctctttgaagcttgtgatataaatgaa 23890811 Query: 558 gatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaat 617 || ||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 23890810 gacatgggcatgaagttcaatgagttcatcgtctttctgtgcctcatttatctgctcaac 23890751 Query: 618 gaccctgctgcatcagaagca 638 || || |||| ||||||||| Sbjct: 23890750 gaaccagctgtgtcagaagca 23890730 Score = 125 bits (63), Expect = 4e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 23890090 gaggaaatggactgggacaagaatggaatggtgaccttcaaagaatttctgtttgcattc 23890031 Query: 873 actcgctgggttgggataggcgaaaacgaggacgaagatgaatgaat 919 ||||||||||||||||| | |||||| |||||||| |||||||||| Sbjct: 23890030 actcgctgggttgggattgacgaaaatgaggacgacaatgaatgaat 23889984 Score = 117 bits (59), Expect = 9e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 23891453 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 23891394 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 23891393 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 23891334 Query: 416 caagactatctttcagcaattcg 438 ||||| ||||| ||||||||| Sbjct: 23891333 caagatcatcttcgagcaattcg 23891311
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 192 bits (97), Expect = 2e-45 Identities = 151/169 (89%) Strand = Plus / Minus Query: 645 aagatgggattaggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttc 704 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 20083 aagatgggattaggaaatcttgaggcaacttttgagaccttggttgatgcatttgttttt 20024 Query: 705 ttggataagaacaaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgag 764 |||||||||||||| ||||| ||||| |||||||| |||||| ||||| |||| |||||| Sbjct: 20023 ttggataagaacaaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgag 19964 Query: 765 agcataccaggggaacgctctgctggccgtatagccatgaaaagatttg 813 | | |||||||||||||| |||| |||||||||||||||||||||| Sbjct: 19963 actgcaacaggggaacgctcttctgggcgtatagccatgaaaagatttg 19915 Score = 184 bits (93), Expect = 5e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctg 497 ||||||||||||||||| ||||| |||||| |||| | ||| |||| || || ||| || Sbjct: 20541 gatgaagattccaatggcgaaatagataaacaagaattgaagcattgtttccaaaagttg 20482 Query: 498 gaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaa 557 ||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 20481 gaaatttcattcacagaggaggagataaatgacctctttgaagcttgtgatataaatgaa 20422 Query: 558 gatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaat 617 || ||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 20421 gacatgggcatgaagttcaatgagttcatcgtctttctgtgcctcatttatctgctcaac 20362 Query: 618 gaccctgctgcatcagaagca 638 || || |||| ||||||||| Sbjct: 20361 gaaccagctgtgtcagaagca 20341 Score = 125 bits (63), Expect = 4e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 19701 gaggaaatggactgggacaagaatggaatggtgaccttcaaagaatttctgtttgcattc 19642 Query: 873 actcgctgggttgggataggcgaaaacgaggacgaagatgaatgaat 919 ||||||||||||||||| | |||||| |||||||| |||||||||| Sbjct: 19641 actcgctgggttgggattgacgaaaatgaggacgacaatgaatgaat 19595 Score = 117 bits (59), Expect = 9e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 21064 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 21005 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 21004 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 20945 Query: 416 caagactatctttcagcaattcg 438 ||||| ||||| ||||||||| Sbjct: 20944 caagatcatcttcgagcaattcg 20922
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 192 bits (97), Expect = 2e-45 Identities = 151/169 (89%) Strand = Plus / Minus Query: 645 aagatgggattaggagatcttgagtcaacttttgagaccttggttgatgcatttgtcttc 704 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 130137 aagatgggattaggaaatcttgaggcaacttttgagaccttggttgatgcatttgttttt 130078 Query: 705 ttggataagaacaaggatgggtatgtgagtaaggatgagatgattcaagcaataaatgag 764 |||||||||||||| ||||| ||||| |||||||| |||||| ||||| |||| |||||| Sbjct: 130077 ttggataagaacaaagatggatatgtcagtaaggaagagatggttcaatcaatgaatgag 130018 Query: 765 agcataccaggggaacgctctgctggccgtatagccatgaaaagatttg 813 | | |||||||||||||| |||| |||||||||||||||||||||| Sbjct: 130017 actgcaacaggggaacgctcttctgggcgtatagccatgaaaagatttg 129969 Score = 184 bits (93), Expect = 5e-43 Identities = 174/201 (86%) Strand = Plus / Minus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctg 497 ||||||||||||||||| ||||| |||||| |||| | ||| |||| || || ||| || Sbjct: 130595 gatgaagattccaatggcgaaatagataaacaagaattgaagcattgtttccaaaagttg 130536 Query: 498 gaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaa 557 ||||| |||||||||||||||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 130535 gaaatttcattcacagaggaggagataaatgacctctttgaagcttgtgatataaatgaa 130476 Query: 558 gatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaat 617 || ||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 130475 gacatgggcatgaagttcaatgagttcatcgtctttctgtgcctcatttatctgctcaac 130416 Query: 618 gaccctgctgcatcagaagca 638 || || |||| ||||||||| Sbjct: 130415 gaaccagctgtgtcagaagca 130395 Score = 125 bits (63), Expect = 4e-25 Identities = 96/107 (89%) Strand = Plus / Minus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 129755 gaggaaatggactgggacaagaatggaatggtgaccttcaaagaatttctgtttgcattc 129696 Query: 873 actcgctgggttgggataggcgaaaacgaggacgaagatgaatgaat 919 ||||||||||||||||| | |||||| |||||||| |||||||||| Sbjct: 129695 actcgctgggttgggattgacgaaaatgaggacgacaatgaatgaat 129649 Score = 117 bits (59), Expect = 9e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 296 gaagctagagtcgaagatggtggagtccatgaagcagagagcgtcgcatggaacttcggt 355 |||||| ||| |||||||||||||||||||| |||||||||||||||| || ||||| | Sbjct: 131118 gaagctcgagacgaagatggtggagtccatgcagcagagagcgtcgcacgggacttcact 131059 Query: 356 caagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggcttgagaaaatg 415 |||||||||| | || || ||||||||||| |||||||||| || ||||||| ||||| Sbjct: 131058 caagtcgttcgatagcatcatcatgaagtttccgaaaatcgatgagagcttgaggaaatg 130999 Query: 416 caagactatctttcagcaattcg 438 ||||| ||||| ||||||||| Sbjct: 130998 caagatcatcttcgagcaattcg 130976
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 139 bits (70), Expect = 3e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctg 497 ||||||||||||||||||||||| ||| || |||| || ||| |||| ||||| ||| || Sbjct: 5502879 gatgaagattccaatggtgaaatagatcaacaagaacttaagcattgttttcaaaagttg 5502938 Query: 498 gaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaa 557 || |||||||||||||| |||||||||| || || ||| | || || ||||| ||||| Sbjct: 5502939 gatatctcattcacagatgaggagataaaagacctatttcaggcatgtgacatttatgaa 5502998 Query: 558 gatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaat 617 | ||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 5502999 aacatgggcatgaaatttaatgagttcattgtcttcctgtgccttgtttatcttctgaat 5503058 Query: 618 ga 619 || Sbjct: 5503059 ga 5503060 Score = 95.6 bits (48), Expect = 3e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 670 caacttttgagaccttggttgatgcatttgtcttcttggataagaacaaggatgggtatg 729 ||||||| ||||| ||||||||| |||| ||||||||||| || ||||| |||||||||| Sbjct: 5503684 caactttcgagacattggttgattcattcgtcttcttggacaaaaacaaagatgggtatg 5503743 Query: 730 tgagtaaggatgagatgattcaagcaataaatgagagcataccaggggaacgctctgctg 789 | || ||| |||||||||| ||||| || || || | ||| ||| ||||||||| ||| Sbjct: 5503744 tcagcaagaatgagatgatacaagcgatcaacgaaaccatcggaggagaacgctcttctg 5503803 Query: 790 gccgtatagccatgaaaagatttg 813 | || |||| |||||||||||||| Sbjct: 5503804 ggcggataggcatgaaaagatttg 5503827 Score = 50.1 bits (25), Expect = 0.018 Identities = 64/77 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||||||||||||||| || | ||| ||||||||||| || || || || || Sbjct: 5503922 gaggaaatggattgggacaagaatggaacggtgaccttcaaggagttcctcttcgctttt 5503981 Query: 873 actcgctgggttgggat 889 ||||| ||||| ||||| Sbjct: 5503982 actcgttgggtggggat 5503998 Score = 48.1 bits (24), Expect = 0.072 Identities = 75/92 (81%) Strand = Plus / Plus Query: 345 ggaacttcggtcaagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggc 404 |||||||| || || || ||||| ||| |||| ||||||||| | ||||| ||| || | Sbjct: 5502276 ggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagt 5502335 Query: 405 ttgagaaaatgcaagactatctttcagcaatt 436 |||||||| |||| | ||||||||||||||| Sbjct: 5502336 ttgagaaactgcagaattatctttcagcaatt 5502367
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 139 bits (70), Expect = 3e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcagaagctg 497 ||||||||||||||||||||||| ||| || |||| || ||| |||| ||||| ||| || Sbjct: 47614 gatgaagattccaatggtgaaatagatcaacaagaacttaagcattgttttcaaaagttg 47673 Query: 498 gaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatgaa 557 || |||||||||||||| |||||||||| || || ||| | || || ||||| ||||| Sbjct: 47674 gatatctcattcacagatgaggagataaaagacctatttcaggcatgtgacatttatgaa 47733 Query: 558 gatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaat 617 | ||||||||||| | ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 47734 aacatgggcatgaaatttaatgagttcattgtcttcctgtgccttgtttatcttctgaat 47793 Query: 618 ga 619 || Sbjct: 47794 ga 47795 Score = 95.6 bits (48), Expect = 3e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 670 caacttttgagaccttggttgatgcatttgtcttcttggataagaacaaggatgggtatg 729 ||||||| ||||| ||||||||| |||| ||||||||||| || ||||| |||||||||| Sbjct: 48419 caactttcgagacattggttgattcattcgtcttcttggacaaaaacaaagatgggtatg 48478 Query: 730 tgagtaaggatgagatgattcaagcaataaatgagagcataccaggggaacgctctgctg 789 | || ||| |||||||||| ||||| || || || | ||| ||| ||||||||| ||| Sbjct: 48479 tcagcaagaatgagatgatacaagcgatcaacgaaaccatcggaggagaacgctcttctg 48538 Query: 790 gccgtatagccatgaaaagatttg 813 | || |||| |||||||||||||| Sbjct: 48539 ggcggataggcatgaaaagatttg 48562 Score = 50.1 bits (25), Expect = 0.018 Identities = 64/77 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||||||||||||||| || | ||| ||||||||||| || || || || || Sbjct: 48657 gaggaaatggattgggacaagaatggaacggtgaccttcaaggagttcctcttcgctttt 48716 Query: 873 actcgctgggttgggat 889 ||||| ||||| ||||| Sbjct: 48717 actcgttgggtggggat 48733 Score = 48.1 bits (24), Expect = 0.072 Identities = 75/92 (81%) Strand = Plus / Plus Query: 345 ggaacttcggtcaagtcgttcaacagtattatcatgaagttcgcgaaaatcgacaagggc 404 |||||||| || || || ||||| ||| |||| ||||||||| | ||||| ||| || | Sbjct: 47011 ggaacttctgttaaatcattcaatagtgttattatgaagttcccaaaaattgacgagagt 47070 Query: 405 ttgagaaaatgcaagactatctttcagcaatt 436 |||||||| |||| | ||||||||||||||| Sbjct: 47071 ttgagaaactgcagaattatctttcagcaatt 47102
>gb|BT021986.1| Arabidopsis thaliana At4g26470 mRNA, complete cds Length = 892 Score = 69.9 bits (35), Expect = 2e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 801 atgaaaagatttgaggagatggattgggacaagaacgggatggttaccttcaaggaattt 860 ||||| ||||||||||| ||||| |||||||||||||| ||||| | |||||| || ||| Sbjct: 706 atgaagagatttgaggaaatggactgggacaagaacggaatggtgaacttcaaagagttt 765 Query: 861 ctgtttgcattcactcgctgggttgggatag 891 || || ||||| || | ||||||||||||| Sbjct: 766 ctcttcgcatttacgcagtgggttgggatag 796
>gb|AF205116.1| Rubus alceifolius clone pRaCIRRI1G3 microsatellite sequence Length = 379 Score = 67.9 bits (34), Expect = 8e-08 Identities = 106/130 (81%) Strand = Plus / Minus Query: 684 ttggttgatgcatttgtcttcttggataagaacaaggatgggtatgtgagtaaggatgag 743 ||||| ||||||||||| |||||||| |||||||||||||| ||||| || || ||| Sbjct: 379 ttggtggatgcatttgtgttcttggacaagaacaaggatggttatgtcagcaaaagtgaa 320 Query: 744 atgattcaagcaataaatgagagcataccaggggaacgctctgctggccgtatagccatg 803 ||| |||| || || ||||| | | | |||| |||||||| |||| || ||||||||| Sbjct: 319 atggttcaggccattaatgaaactacatcaggagaacgctcctctgggcgaatagccatg 260 Query: 804 aaaagatttg 813 |||||||||| Sbjct: 259 aaaagatttg 250
>gb|AC145470.19| Medicago truncatula clone mth2-6m8, complete sequence Length = 110496 Score = 56.0 bits (28), Expect = 3e-04 Identities = 144/180 (80%), Gaps = 2/180 (1%) Strand = Plus / Minus Query: 438 gatgaagattccaatggtgaaattgataaagaagagctcaagaattgctttcag-aagct 496 ||||||||||| ||||| ||| ||| |||||||| | ||||| || |||||| ||||| Sbjct: 25310 gatgaagattctaatgggacaatagatcaagaagagttgaagaagtg-tttcagtaagct 25252 Query: 497 ggaaatctcattcacagaggaggagataagtgatctctttgaagcttgcgacataaatga 556 |||||| || || | ||||| |||| | |||||| |||||||| || || || ||||| Sbjct: 25251 ggaaatttctttttctgaggaagagaccaatgatctttttgaagcatgtgatattaatga 25192 Query: 557 agatatgggcatgaagtacaatgagttcattgtctttctgtgccttgtttatcttctcaa 616 ||| |||| ||||||| || |||||||||||| |||| || ||||| || |||||||| Sbjct: 25191 tgatttgggaatgaagttcagtgagttcattgtacttctttgtcttgtctaccttctcaa 25132
>dbj|AK227901.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-47-C09 Length = 1046 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| |||||||||||||| ||||| | |||||| || ||||| || ||||| Sbjct: 793 gaggaaatggactgggacaagaacggaatggtgaacttcaaagagtttctcttcgcattt 852 Query: 873 actcgctgggttgggatag 891 || | ||||||||||||| Sbjct: 853 acgcagtgggttgggatag 871
>ref|NM_118780.2| Arabidopsis thaliana calcium ion binding (AT4G26470) mRNA, complete cds Length = 890 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| |||||||||||||| ||||| | |||||| || ||||| || ||||| Sbjct: 765 gaggaaatggactgggacaagaacggaatggtgaacttcaaagagtttctcttcgcattt 824 Query: 873 actcgctgggttgggatag 891 || | ||||||||||||| Sbjct: 825 acgcagtgggttgggatag 843
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| |||||||||||||| ||||| | |||||| || ||||| || ||||| Sbjct: 69395 gaggaaatggactgggacaagaacggaatggtgaacttcaaagagtttctcttcgcattt 69454 Query: 873 actcgctgggttgggatag 891 || | ||||||||||||| Sbjct: 69455 acgcagtgggttgggatag 69473
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project) Length = 92657 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| |||||||||||||| ||||| | |||||| || ||||| || ||||| Sbjct: 1259 gaggaaatggactgggacaagaacggaatggtgaacttcaaagagtttctcttcgcattt 1318 Query: 873 actcgctgggttgggatag 891 || | ||||||||||||| Sbjct: 1319 acgcagtgggttgggatag 1337
>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project) Length = 80677 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Minus Query: 813 gaggagatggattgggacaagaacgggatggttaccttcaaggaatttctgtttgcattc 872 ||||| ||||| |||||||||||||| ||||| | |||||| || ||||| || ||||| Sbjct: 37013 gaggaaatggactgggacaagaacggaatggtgaacttcaaagagtttctcttcgcattt 36954 Query: 873 actcgctgggttgggatag 891 || | ||||||||||||| Sbjct: 36953 acgcagtgggttgggatag 36935
>gb|AC012374.13| Homo sapiens chromosome 15 clone ctd-2287a20 map 15q21, complete sequence Length = 142105 Score = 48.1 bits (24), Expect = 0.072 Identities = 24/24 (100%) Strand = Plus / Minus Query: 585 attgtctttctgtgccttgtttat 608 |||||||||||||||||||||||| Sbjct: 79408 attgtctttctgtgccttgtttat 79385
>gb|AC010999.6|AC010999 Homo sapiens chromosome 15 clone RP11-323F24 map 15q21.3, complete sequence Length = 221986 Score = 48.1 bits (24), Expect = 0.072 Identities = 24/24 (100%) Strand = Plus / Minus Query: 585 attgtctttctgtgccttgtttat 608 |||||||||||||||||||||||| Sbjct: 39973 attgtctttctgtgccttgtttat 39950
>gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H5 map 15q21.3, complete sequence Length = 185446 Score = 48.1 bits (24), Expect = 0.072 Identities = 24/24 (100%) Strand = Plus / Minus Query: 585 attgtctttctgtgccttgtttat 608 |||||||||||||||||||||||| Sbjct: 175051 attgtctttctgtgccttgtttat 175028
>gb|AC011546.6| Homo sapiens chromosome 19 clone LLNLR-271E2, complete sequence Length = 35383 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 19886 ttgtctttctgtgccttgtttat 19908
>gb|AC068721.4| Homo sapiens BAC clone RP11-545L5 from 4, complete sequence Length = 177270 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 66041 ttgtctttctgtgccttgtttat 66063
>gb|AC008413.7| Homo sapiens chromosome 5 clone CTC-281M20, complete sequence Length = 143200 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 132449 ttgtctttctgtgccttgtttat 132427
>gb|AC010220.5| Homo sapiens chromosome 5 clone CTC-254O18, complete sequence Length = 29439 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 25854 ttgtctttctgtgccttgtttat 25876
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence Length = 175075 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 139584 ttgtctttctgtgccttgtttat 139606
>gb|AC129223.5| Mus musculus BAC clone RP24-535L7 from 9, complete sequence Length = 150462 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 38113 ttgtctttctgtgccttgtttat 38135
>gb|AC134590.5| Mus musculus BAC clone RP23-368K22 from 9, complete sequence Length = 180271 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttat 608 ||||||||||||||||||||||| Sbjct: 168534 ttgtctttctgtgccttgtttat 168556
>emb|Z70041.1|HSU39H5 Human DNA sequence from clone LL0XNC01-39H5 on chromosome X, complete sequence Length = 16080 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 587 tgtctttctgtgccttgtttat 608 |||||||||||||||||||||| Sbjct: 15720 tgtctttctgtgccttgtttat 15741
>gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4, complete sequence Length = 194206 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 585 attgtctttctgtgccttgttt 606 |||||||||||||||||||||| Sbjct: 161075 attgtctttctgtgccttgttt 161054
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10, complete sequence Length = 258048 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 910 atgaatgaatgatgtggaagct 931 |||||||||||||||||||||| Sbjct: 139487 atgaatgaatgatgtggaagct 139508
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 850 tcaaggaatttctgtttgcatt 871 |||||||||||||||||||||| Sbjct: 17924 tcaaggaatttctgtttgcatt 17903
>gb|AF222685.1|AF222685 Homo sapiens chromosome 21 PAC 103K19 map 21q11.2, complete sequence Length = 85040 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 850 tcaaggaatttctgtttgcatt 871 |||||||||||||||||||||| Sbjct: 67898 tcaaggaatttctgtttgcatt 67877
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 850 tcaaggaatttctgtttgcatt 871 |||||||||||||||||||||| Sbjct: 226095 tcaaggaatttctgtttgcatt 226074
>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence Length = 137074 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 850 tcaaggaatttctgtttgcatt 871 |||||||||||||||||||||| Sbjct: 12314 tcaaggaatttctgtttgcatt 12293
>emb|AL929066.7| Mouse DNA sequence from clone RP23-68E1 on chromosome 2, complete sequence Length = 210907 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 365 caacagtattatcatgaagttc 386 |||||||||||||||||||||| Sbjct: 62796 caacagtattatcatgaagttc 62817
>ref|XM_001030830.1| Tetrahymena thermophila SB210 Protein kinase domain containing protein (TTHERM_01006380) mRNA, complete cds Length = 1248 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 aaattgataaagaagagctca 477 ||||||||||||||||||||| Sbjct: 1028 aaattgataaagaagagctca 1048
>gb|AC193158.1| Homo sapiens chromosome 8 clone WI2-2953G23, complete sequence Length = 41442 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 cattgtctttctgtgccttgtttat 608 |||||||||||||||||| |||||| Sbjct: 33540 cattgtctttctgtgcctggtttat 33516
>tpg|BK005578.1| TPA_exp: Saccharomyces cerevisiae checkpoint forkhead associated with RING 1 (CHF1) gene, complete cds Length = 1251 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 893 cgaaaacgaggacgaagatga 913 ||||||||||||||||||||| Sbjct: 1164 cgaaaacgaggacgaagatga 1184
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cggcgaagaaggaaaaatatc 81 ||||||||||||||||||||| Sbjct: 1035829 cggcgaagaaggaaaaatatc 1035809
>gb|AC073884.4| Homo sapiens BAC clone CTD-2006F7 from 7, complete sequence Length = 66224 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 797 agccatgaaaagatttgaggagatg 821 |||||||||| |||||||||||||| Sbjct: 65943 agccatgaaatgatttgaggagatg 65919
>gb|AC114964.2| Homo sapiens chromosome 5 clone RP11-275B7, complete sequence Length = 171025 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1091 gtaagcaaaatattgaaacat 1111 ||||||||||||||||||||| Sbjct: 2905 gtaagcaaaatattgaaacat 2885
>emb|AL391557.11| Human DNA sequence from clone RP11-506J19 on chromosome 1 Contains STSs and GSSs, complete sequence Length = 130715 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 tgtctttctgtgccttgttta 607 ||||||||||||||||||||| Sbjct: 25851 tgtctttctgtgccttgttta 25871
>emb|AL133289.9| Human DNA sequence from clone RP4-804P4 on chromosome 1q42.11-43 Contains part of a novel gene (FLJ11383), complete sequence Length = 100515 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 ttgtctttctgtgccttgtttatct 610 |||||||||||||||| |||||||| Sbjct: 84011 ttgtctttctgtgcctggtttatct 84035
>gb|AC010477.8| Homo sapiens chromosome 5 clone CTD-2313D3, complete sequence Length = 130888 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1091 gtaagcaaaatattgaaacat 1111 ||||||||||||||||||||| Sbjct: 52995 gtaagcaaaatattgaaacat 52975
>gb|AC023842.5|AC023842 Homo sapiens chromosome 8, clone RP11-374M4, complete sequence Length = 187351 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 cattgtctttctgtgccttgtttat 608 |||||||||||||||||| |||||| Sbjct: 133898 cattgtctttctgtgcctggtttat 133874
>gb|U00059.1|YSCH8263 Saccharomyces cerevisiae chromosome VIII cosmid 8263 Length = 39954 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 893 cgaaaacgaggacgaagatga 913 ||||||||||||||||||||| Sbjct: 26748 cgaaaacgaggacgaagatga 26728
>gb|AC000112.1|HSAC000112 Human PAC clone DJ149P21, complete sequence Length = 111118 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 cattgtctttctgtgccttgtttat 608 |||||||||||||||||| |||||| Sbjct: 65506 cattgtctttctgtgcctggtttat 65482
>gb|U51995.1| Caenorhabditis elegans cosmid F07G6, complete sequence Length = 38969 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 844 ttaccttcaaggaatttctgt 864 ||||||||||||||||||||| Sbjct: 11922 ttaccttcaaggaatttctgt 11902 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 223,679,833 Number of extensions: 12580011 Number of successful extensions: 275367 Number of sequences better than 10.0: 52 Number of HSP's gapped: 275346 Number of HSP's successfully gapped: 68 Length of query: 1168 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1145 Effective length of database: 18,503,978,556 Effective search space: 21187055446620 Effective search space used: 21187055446620 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)