ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf109n23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049506.1| Oryza sativa (japonica cultivar-group) Os01g0348000 (Os01g0348000) mRNA, complete cds Length = 1086 Score = 216 bits (109), Expect = 2e-52 Identities = 340/417 (81%) Strand = Plus / Plus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 428 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 487 Query: 533 cttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagatta 592 ||| | |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | Sbjct: 488 attgcgcgtcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatca 547 Query: 593 ggacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagca 652 ||| || ||||||||||||||||| |||||||| | |||||||||||||||| |||| Sbjct: 548 agaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagct 607 Query: 653 ccggctgcggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggca 712 ||||||| ||||||||||||| ||| |||| | ||| ||||| |||| || |||| Sbjct: 608 tcggctgcagcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggca 667 Query: 713 tcacgtcagaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagc 772 ||||||| ||||||| |||||| ||| | || |||| || | |||||||||| ||||| Sbjct: 668 tcacgtcggaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagc 727 Query: 773 tcatgttcgaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaag 832 | ||||||||||| ||||||| || |||||| ||||||||| ||||| |||| Sbjct: 728 tgctgttcgaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagc 787 Query: 833 ctcagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||||||||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 788 ggcagctggcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 844 Score = 123 bits (62), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 903 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 959 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| ||||||||||||||||||||||||||||| || || || || || ||||| || Sbjct: 960 ctggatcgccaagaactcgtggagcaacgactggggcgagcagggctacgtgtacctggc 1019 Query: 1065 aaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctaccc 1121 ||||||||| ||| || |||||| || |||||||||||||| || |||||||| Sbjct: 1020 caaggacgtgtggtggccccagggcacctgtggcctcgccacctccccattctaccc 1076 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 316 atgaacaggttcggcgacctca 337
>ref|NM_001049504.1| Oryza sativa (japonica cultivar-group) Os01g0347500 (Os01g0347500) mRNA, complete cds Length = 1086 Score = 208 bits (105), Expect = 4e-50 Identities = 339/417 (81%) Strand = Plus / Plus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 428 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 487 Query: 533 cttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagatta 592 ||| | |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | Sbjct: 488 attgcgcgtcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatca 547 Query: 593 ggacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagca 652 ||| || ||||||||||||||||| |||||||| | |||||||||||||||| |||| Sbjct: 548 agaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagct 607 Query: 653 ccggctgcggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggca 712 ||||||| ||||||||||||| ||| |||| | ||| ||||| |||| || |||| Sbjct: 608 tcggctgcagcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggca 667 Query: 713 tcacgtcagaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagc 772 ||||||| ||||||| |||||| ||| | || |||| || | |||||||||| ||||| Sbjct: 668 tcacgtcggaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagc 727 Query: 773 tcatgttcgaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaag 832 | ||||||||||| ||||||| || |||||| ||||||||| ||||| |||| Sbjct: 728 tgctgttcgaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagc 787 Query: 833 ctcagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| ||||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 788 ggcagttggcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 844 Score = 117 bits (59), Expect = 1e-22 Identities = 114/130 (87%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 903 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 959 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| |||||||||||||||||||||||||||||||| || || || || ||||| || Sbjct: 960 ctggatcgccaagaactcgtggagcaacgactggggtgagcagggctacgtgtacctggc 1019 Query: 1065 aaaggacgtg 1074 ||||||||| Sbjct: 1020 caaggacgtg 1029 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 316 atgaacaggttcggcgacctca 337
>ref|NM_001049462.1| Oryza sativa (japonica cultivar-group) Os01g0330300 (Os01g0330300) mRNA, complete cds Length = 1104 Score = 204 bits (103), Expect = 6e-49 Identities = 226/267 (84%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggcac 533 |||||||||||| ||||||||||||||||| || |||||||||||||||| ||| ||| | Sbjct: 447 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagctccagggctc 506 Query: 534 ttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattag 593 || | ||||||||||||||||||||||||||||| ||||| ||| || ||| ||| | Sbjct: 507 ctgcgcgtcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaa 566 Query: 594 gacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcac 653 ||| || ||||||||||||||||| |||||||| | |||||||||||||||| ||||| Sbjct: 567 gaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaa 626 Query: 654 cggctgcggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcat 713 ||| ||||||||||| | ||| ||| |||| | | ||| |||||| |||| || ||| | Sbjct: 627 cgggtgcggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgt 686 Query: 714 cacgtcagaggagaggtacccatacgc 740 |||||| |||||||||||||| ||||| Sbjct: 687 cacgtcggaggagaggtacccgtacgc 713 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 998 acaagtactggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtct 1057 ||||||||||||| ||||||||||||||||||| ||||||||| || || || || || | Sbjct: 971 acaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgt 1030 Query: 1058 acctcgcaaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttct 1117 |||| || ||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 1031 acctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttct 1090 Query: 1118 acccgac 1124 ||||||| Sbjct: 1091 acccgac 1097 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Plus Query: 947 tgaaccacgccgtcaccatcgtcggctactgcgag 981 ||||||||||||||||||||||||||||||||||| Sbjct: 923 tgaaccacgccgtcaccatcgtcggctactgcgag 957 Score = 52.0 bits (26), Expect = 0.005 Identities = 83/102 (81%) Strand = Plus / Plus Query: 835 cagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcggttcc 894 |||||||| ||||||| || | |||||| |||||||||||||| ||||| |||| | Sbjct: 808 cagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccg 867 Query: 895 gcgttccagttctactccggcggcatctaccgtggcccctgc 936 | ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 868 gagttccagttctacaagggcggcgtgtaccggggcccctgc 909
>ref|NM_001048940.1| Oryza sativa (japonica cultivar-group) Os01g0217300 (Os01g0217300) mRNA, complete cds Length = 1101 Score = 176 bits (89), Expect = 1e-40 Identities = 170/197 (86%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggcac 533 |||||||||||| ||||||||||||||||| || ||||||||||||||| ||| || | Sbjct: 444 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccagcgctc 503 Query: 534 ttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattag 593 || | |||||||||||||||||||||| |||||| ||||| || |||||||||| || Sbjct: 504 ctgcgcgtcgtgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcag 563 Query: 594 gacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcac 653 ||| || ||||||||||||||||| |||||||| | |||||||||||||||| ||||| Sbjct: 564 gaccggcgagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcag 623 Query: 654 cggctgcggcggcggcc 670 ||||||| ||||||||| Sbjct: 624 cggctgcagcggcggcc 640 Score = 145 bits (73), Expect = 5e-31 Identities = 153/179 (85%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 946 gtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagtac 1005 ||||||||||||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 919 gtgaaccacgccgtcgccatcgtcggctactgcgagggcttcggcggcg---acaagtac 975 Query: 1006 tggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgca 1065 ||||| ||||||||||||||| ||| ||||||||| || || || || ||||||||||| Sbjct: 976 tggatcgccaagaactcgtggggcagcgactggggcgagcagggctacgtctacctcgcc 1035 Query: 1066 aaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctacccgac 1124 ||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 1036 aaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgac 1094 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 322 atgaacaggttcggcgacctca 343
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 153 bits (77), Expect = 2e-33 Identities = 281/349 (80%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | ||| || Sbjct: 13842729 tcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatcaagaccggc 13842788 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 13842789 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcttcggctgc 13842848 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 ||||||||||||| ||| |||| | ||| ||||| |||| || ||||||||||| Sbjct: 13842849 agcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggcatcacgtcg 13842908 Query: 721 gaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagctcatgttc 780 ||||||| |||||| ||| | || |||| || | |||||||||| |||||| ||||| Sbjct: 13842909 gaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagctgctgttc 13842968 Query: 781 gaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaagctcagctg 840 |||||| ||||||| || |||||| ||||||||| ||||| |||| |||||| Sbjct: 13842969 gaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagcggcagctg 13843028 Query: 841 gcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 13843029 gcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 13843077 Score = 151 bits (76), Expect = 7e-33 Identities = 169/200 (84%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 ||||||||||||||||||||||||||||| ||||| ||| || ||| ||| | ||| || Sbjct: 12735451 tcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaagaccggc 12735510 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||| ||| Sbjct: 12735511 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaacgggtgc 12735570 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 |||||||| | ||| ||| |||| | | ||| |||||| |||| || ||| ||||||| Sbjct: 12735571 ggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgtcacgtcg 12735630 Query: 721 gaggagaggtacccatacgc 740 |||||||||||||| ||||| Sbjct: 12735631 gaggagaggtacccgtacgc 12735650 Score = 145 bits (73), Expect = 5e-31 Identities = 153/179 (85%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 946 gtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagtac 1005 ||||||||||||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 6400884 gtgaaccacgccgtcgccatcgtcggctactgcgagggcttcggcggcg---acaagtac 6400940 Query: 1006 tggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgca 1065 ||||| ||||||||||||||| ||| ||||||||| || || || || ||||||||||| Sbjct: 6400941 tggatcgccaagaactcgtggggcagcgactggggcgagcagggctacgtctacctcgcc 6401000 Query: 1066 aaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctacccgac 1124 ||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 6401001 aaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgac 6401059 Score = 145 bits (73), Expect = 5e-31 Identities = 280/349 (80%) Strand = Plus / Minus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | ||| || Sbjct: 13821570 tcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatcaagaccggc 13821511 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 13821510 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcttcggctgc 13821451 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 ||||||||||||| ||| |||| | ||| ||||| |||| || ||||||||||| Sbjct: 13821450 agcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggcatcacgtcg 13821391 Query: 721 gaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagctcatgttc 780 ||||||| |||||| ||| | || |||| || | |||||||||| |||||| ||||| Sbjct: 13821390 gaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagctgctgttc 13821331 Query: 781 gaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaagctcagctg 840 |||||| ||||||| || |||||| ||||||||| ||||| |||| ||| || Sbjct: 13821330 gaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagcggcagttg 13821271 Query: 841 gcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 13821270 gcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 13821222 Score = 139 bits (70), Expect = 3e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||||||| |||||| ||||| || |||||||||| ||||| || Sbjct: 6400476 tcgtgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggc 6400535 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 6400536 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcagcggctgc 6400595 Query: 661 ggcggcggcc 670 ||||||||| Sbjct: 6400596 agcggcggcc 6400605 Score = 123 bits (62), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 13843136 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 13843192 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| ||||||||||||||||||||||||||||| || || || || || ||||| || Sbjct: 13843193 ctggatcgccaagaactcgtggagcaacgactggggcgagcagggctacgtgtacctggc 13843252 Query: 1065 aaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctaccc 1121 ||||||||| ||| || |||||| || |||||||||||||| || |||||||| Sbjct: 13843253 caaggacgtgtggtggccccagggcacctgtggcctcgccacctccccattctaccc 13843309 Score = 117 bits (59), Expect = 1e-22 Identities = 114/130 (87%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 13821163 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 13821107 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| |||||||||||||||||||||||||||||||| || || || || ||||| || Sbjct: 13821106 ctggatcgccaagaactcgtggagcaacgactggggtgagcagggctacgtgtacctggc 13821047 Query: 1065 aaaggacgtg 1074 ||||||||| Sbjct: 13821046 caaggacgtg 13821037 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 998 acaagtactggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtct 1057 ||||||||||||| ||||||||||||||||||| ||||||||| || || || || || | Sbjct: 12735908 acaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgt 12735967 Query: 1058 acctcgcaaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttct 1117 |||| || ||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 12735968 acctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttct 12736027 Query: 1118 acccgac 1124 ||||||| Sbjct: 12736028 acccgac 12736034 Score = 89.7 bits (45), Expect = 2e-14 Identities = 105/125 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| ||||| ||||| ||| || Sbjct: 13825799 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13825858 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | ||||||| ||||||| || ||||||||||||||| |||| ||| |||||| Sbjct: 13825859 ctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggc 13825918 Query: 664 ggcgg 668 ||||| Sbjct: 13825919 ggcgg 13825923 Score = 89.7 bits (45), Expect = 2e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| ||||| ||||| ||| || Sbjct: 13831458 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 13831399 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | ||||||| ||||||| || ||||||||||||||| |||| ||| |||||| Sbjct: 13831398 ctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggc 13831339 Query: 664 ggcgg 668 ||||| Sbjct: 13831338 ggcgg 13831334 Score = 81.8 bits (41), Expect = 6e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| |||| ||||| ||| || Sbjct: 6395764 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgcagatcaggacggggaag 6395705 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | |||| || ||||||| || |||||||||||||||| ||| |||| |||| | Sbjct: 6395704 ctgacgccgctatcggagcaggagctggtggactgcgacaccggcagctccgggtgcgcc 6395645 Query: 664 ggcggccac 672 ||||||||| Sbjct: 6395644 ggcggccac 6395636 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 13821730 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 13821671 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 13842569 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 13842628 Score = 75.8 bits (38), Expect = 4e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagc 523 |||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 12735292 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagc 12735341 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaag 522 |||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 6400333 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaag 6400381 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Plus Query: 947 tgaaccacgccgtcaccatcgtcggctactgcgag 981 ||||||||||||||||||||||||||||||||||| Sbjct: 12735860 tgaaccacgccgtcaccatcgtcggctactgcgag 12735894 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Minus Query: 545 gctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggagc 604 |||||||||||||||||||||||||||| || || ||| ||||| ||||| ||| ||| Sbjct: 12729240 gctgggcgttcgcggcggtggcggcgatggaggggctgatgaagatcaggacggggcagc 12729181 Query: 605 tggtgtcgctgtccgagcaggtactcgtggactgcg 640 || | ||||||| ||||||| || |||||||||| Sbjct: 12729180 tgacgccgctgtcggagcaggagctggtggactgcg 12729145 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 13826113 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 13826164 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 13831144 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 13831093 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||||||||||||||| Sbjct: 24340519 tgctgggcgttcgcggcggtggcggcga 24340492 Score = 52.0 bits (26), Expect = 0.005 Identities = 83/102 (81%) Strand = Plus / Plus Query: 835 cagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcggttcc 894 |||||||| ||||||| || | |||||| |||||||||||||| ||||| |||| | Sbjct: 12735745 cagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccg 12735804 Query: 895 gcgttccagttctactccggcggcatctaccgtggcccctgc 936 | ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 12735805 gagttccagttctacaagggcggcgtgtaccggggcccctgc 12735846 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Minus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| ||||||| |||||| ||||| ||||| | ||||||||||||||| Sbjct: 6395450 gcagccggtgacggcgtacatcgacgcgagcgggccggcgttccagttctac 6395399 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1000 aagtactggattgccaagaactcgtggagcaa 1031 ||||||||||| ||||||||||||||| |||| Sbjct: 12728767 aagtactggatagccaagaactcgtggggcaa 12728736 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||| ||||||||||| Sbjct: 24348241 tgctgggcgttcgcggtggtggcggcga 24348214 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 6400211 atgaacaggttcggcgacctca 6400232 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 13821842 atgaacaggttcggcgacctca 13821821 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 13842457 atgaacaggttcggcgacctca 13842478
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 153 bits (77), Expect = 2e-33 Identities = 281/349 (80%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | ||| || Sbjct: 3031 tcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatcaagaccggc 3090 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 3091 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcttcggctgc 3150 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 ||||||||||||| ||| |||| | ||| ||||| |||| || ||||||||||| Sbjct: 3151 agcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggcatcacgtcg 3210 Query: 721 gaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagctcatgttc 780 ||||||| |||||| ||| | || |||| || | |||||||||| |||||| ||||| Sbjct: 3211 gaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagctgctgttc 3270 Query: 781 gaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaagctcagctg 840 |||||| ||||||| || |||||| ||||||||| ||||| |||| |||||| Sbjct: 3271 gaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagcggcagctg 3330 Query: 841 gcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 3331 gcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 3379 Score = 123 bits (62), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 3438 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 3494 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| ||||||||||||||||||||||||||||| || || || || || ||||| || Sbjct: 3495 ctggatcgccaagaactcgtggagcaacgactggggcgagcagggctacgtgtacctggc 3554 Query: 1065 aaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctaccc 1121 ||||||||| ||| || |||||| || |||||||||||||| || |||||||| Sbjct: 3555 caaggacgtgtggtggccccagggcacctgtggcctcgccacctccccattctaccc 3611 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 2871 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 2930 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 2759 atgaacaggttcggcgacctca 2780
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0440D10 Length = 144340 Score = 153 bits (77), Expect = 2e-33 Identities = 281/349 (80%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | ||| || Sbjct: 80132 tcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatcaagaccggc 80191 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 80192 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcttcggctgc 80251 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 ||||||||||||| ||| |||| | ||| ||||| |||| || ||||||||||| Sbjct: 80252 agcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggcatcacgtcg 80311 Query: 721 gaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagctcatgttc 780 ||||||| |||||| ||| | || |||| || | |||||||||| |||||| ||||| Sbjct: 80312 gaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagctgctgttc 80371 Query: 781 gaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaagctcagctg 840 |||||| ||||||| || |||||| ||||||||| ||||| |||| |||||| Sbjct: 80372 gaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagcggcagctg 80431 Query: 841 gcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 80432 gcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 80480 Score = 145 bits (73), Expect = 5e-31 Identities = 280/349 (80%) Strand = Plus / Minus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||| | | |||||| ||||| ||| || ||||||| | ||| || Sbjct: 58973 tcgtgctgggcgttcgcgtccgcggcggccatcgagggcctgcacaagatcaagaccggc 58914 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||||| Sbjct: 58913 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcttcggctgc 58854 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 ||||||||||||| ||| |||| | ||| ||||| |||| || ||||||||||| Sbjct: 58853 agcggcggccactccgacacggcgctcaacctggtggcgtcccgcggcggcatcacgtcg 58794 Query: 721 gaggagaggtacccatacgccggattccaaggaaagtgcgacgtggacaagctcatgttc 780 ||||||| |||||| ||| | || |||| || | |||||||||| |||||| ||||| Sbjct: 58793 gaggagaagtacccgtacacgggcgtccagggcagctgcgacgtgggcaagctgctgttc 58734 Query: 781 gaccaccaggcgtccatcaagggcttcaaggccgtgccgtccaacaacgaagctcagctg 840 |||||| ||||||| || |||||| ||||||||| ||||| |||| ||| || Sbjct: 58733 gaccactcggcgtccgtctccggcttcgccgccgtgccgcccaacgacgagcggcagttg 58674 Query: 841 gcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcg 889 ||| | ||||| || | |||||| |||||||||||||| ||||| |||| Sbjct: 58673 gcgcttgccgtggcgaggcagccggtgacggtgtacatcgacgcgagcg 58625 Score = 123 bits (62), Expect = 2e-24 Identities = 150/177 (84%), Gaps = 3/177 (1%) Strand = Plus / Plus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 80539 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 80595 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| ||||||||||||||||||||||||||||| || || || || || ||||| || Sbjct: 80596 ctggatcgccaagaactcgtggagcaacgactggggcgagcagggctacgtgtacctggc 80655 Query: 1065 aaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctaccc 1121 ||||||||| ||| || |||||| || |||||||||||||| || |||||||| Sbjct: 80656 caaggacgtgtggtggccccagggcacctgtggcctcgccacctccccattctaccc 80712 Score = 117 bits (59), Expect = 1e-22 Identities = 114/130 (87%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 945 tgtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagta 1004 ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| Sbjct: 58566 tgtgaaccacgccgtcaccatcgtcggctactgcgagaacttcggcg-gggaaa--agta 58510 Query: 1005 ctggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgc 1064 |||||| |||||||||||||||||||||||||||||||| || || || || ||||| || Sbjct: 58509 ctggatcgccaagaactcgtggagcaacgactggggtgagcagggctacgtgtacctggc 58450 Query: 1065 aaaggacgtg 1074 ||||||||| Sbjct: 58449 caaggacgtg 58440 Score = 89.7 bits (45), Expect = 2e-14 Identities = 105/125 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| ||||| ||||| ||| || Sbjct: 63202 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 63261 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | ||||||| ||||||| || ||||||||||||||| |||| ||| |||||| Sbjct: 63262 ctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggc 63321 Query: 664 ggcgg 668 ||||| Sbjct: 63322 ggcgg 63326 Score = 89.7 bits (45), Expect = 2e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| ||||| ||||| ||| || Sbjct: 68861 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgaagatcaggacggggcag 68802 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | ||||||| ||||||| || ||||||||||||||| |||| ||| |||||| Sbjct: 68801 ctgacgccgctgtcggagcaggagctggtggactgcgacaccaacagcaacgggtgcggc 68742 Query: 664 ggcgg 668 ||||| Sbjct: 68741 ggcgg 68737 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 59133 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 59074 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 473 agccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagcaccaaggca 532 ||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| Sbjct: 79972 agccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagttccaaggca 80031 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 63516 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 63567 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 68547 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 68496 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 59245 atgaacaggttcggcgacctca 59224 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 79860 atgaacaggttcggcgacctca 79881
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 151 bits (76), Expect = 7e-33 Identities = 169/200 (84%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 ||||||||||||||||||||||||||||| ||||| ||| || ||| ||| | ||| || Sbjct: 15850 tcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaagaccggc 15909 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||| ||| Sbjct: 15910 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaacgggtgc 15969 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 |||||||| | ||| ||| |||| | | ||| |||||| |||| || ||| ||||||| Sbjct: 15970 ggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgtcacgtcg 16029 Query: 721 gaggagaggtacccatacgc 740 |||||||||||||| ||||| Sbjct: 16030 gaggagaggtacccgtacgc 16049 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 998 acaagtactggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtct 1057 ||||||||||||| ||||||||||||||||||| ||||||||| || || || || || | Sbjct: 16307 acaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgt 16366 Query: 1058 acctcgcaaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttct 1117 |||| || ||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 16367 acctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttct 16426 Query: 1118 acccgac 1124 ||||||| Sbjct: 16427 acccgac 16433 Score = 75.8 bits (38), Expect = 4e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagc 523 |||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 15691 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagc 15740 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Plus Query: 947 tgaaccacgccgtcaccatcgtcggctactgcgag 981 ||||||||||||||||||||||||||||||||||| Sbjct: 16259 tgaaccacgccgtcaccatcgtcggctactgcgag 16293 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Minus Query: 545 gctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggagc 604 |||||||||||||||||||||||||||| || || ||| ||||| ||||| ||| ||| Sbjct: 9639 gctgggcgttcgcggcggtggcggcgatggaggggctgatgaagatcaggacggggcagc 9580 Query: 605 tggtgtcgctgtccgagcaggtactcgtggactgcg 640 || | ||||||| ||||||| || |||||||||| Sbjct: 9579 tgacgccgctgtcggagcaggagctggtggactgcg 9544 Score = 52.0 bits (26), Expect = 0.005 Identities = 83/102 (81%) Strand = Plus / Plus Query: 835 cagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcggttcc 894 |||||||| ||||||| || | |||||| |||||||||||||| ||||| |||| | Sbjct: 16144 cagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccg 16203 Query: 895 gcgttccagttctactccggcggcatctaccgtggcccctgc 936 | ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 16204 gagttccagttctacaagggcggcgtgtaccggggcccctgc 16245 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1000 aagtactggattgccaagaactcgtggagcaa 1031 ||||||||||| ||||||||||||||| |||| Sbjct: 9166 aagtactggatagccaagaactcgtggggcaa 9135
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 151 bits (76), Expect = 7e-33 Identities = 169/200 (84%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 ||||||||||||||||||||||||||||| ||||| ||| || ||| ||| | ||| || Sbjct: 102480 tcgtgctgggcgttcgcggcggtggcggccatcgagggcctgcacaggatcaagaccggc 102539 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||| ||| Sbjct: 102540 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcaacgggtgc 102599 Query: 661 ggcggcggccactcagactcggccatggccctcgtggccgcccgtggtggcatcacgtca 720 |||||||| | ||| ||| |||| | | ||| |||||| |||| || ||| ||||||| Sbjct: 102600 ggcggcgggcgctccgacacggcgctcggcctggtggcctcccgcggcggcgtcacgtcg 102659 Query: 721 gaggagaggtacccatacgc 740 |||||||||||||| ||||| Sbjct: 102660 gaggagaggtacccgtacgc 102679 Score = 109 bits (55), Expect = 3e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 998 acaagtactggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtct 1057 ||||||||||||| ||||||||||||||||||| ||||||||| || || || || || | Sbjct: 102937 acaagtactggatcgccaagaactcgtggagcagcgactggggcgagcagggctacgtgt 102996 Query: 1058 acctcgcaaaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttct 1117 |||| || ||||||||| ||| | |||||| ||||||||||||||||||||||||| Sbjct: 102997 acctggccaaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttct 103056 Query: 1118 acccgac 1124 ||||||| Sbjct: 103057 acccgac 103063 Score = 75.8 bits (38), Expect = 4e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaagc 523 |||||||||||| ||||||||||||||||| || |||||||||||||||| Sbjct: 102321 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaagc 102370 Score = 69.9 bits (35), Expect = 2e-08 Identities = 35/35 (100%) Strand = Plus / Plus Query: 947 tgaaccacgccgtcaccatcgtcggctactgcgag 981 ||||||||||||||||||||||||||||||||||| Sbjct: 102889 tgaaccacgccgtcaccatcgtcggctactgcgag 102923 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Minus Query: 545 gctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggagc 604 |||||||||||||||||||||||||||| || || ||| ||||| ||||| ||| ||| Sbjct: 96269 gctgggcgttcgcggcggtggcggcgatggaggggctgatgaagatcaggacggggcagc 96210 Query: 605 tggtgtcgctgtccgagcaggtactcgtggactgcg 640 || | ||||||| ||||||| || |||||||||| Sbjct: 96209 tgacgccgctgtcggagcaggagctggtggactgcg 96174 Score = 52.0 bits (26), Expect = 0.005 Identities = 83/102 (81%) Strand = Plus / Plus Query: 835 cagctggcgatcgccgtagccatgcagcccgtgacggtgtacattgacgccagcggttcc 894 |||||||| ||||||| || | |||||| |||||||||||||| ||||| |||| | Sbjct: 102774 cagctggccctcgccgtggcaaggcagccggtgacggtgtacatcgacgcgagcgccccg 102833 Query: 895 gcgttccagttctactccggcggcatctaccgtggcccctgc 936 | ||||||||||||| |||||| | ||||| ||||||||| Sbjct: 102834 gagttccagttctacaagggcggcgtgtaccggggcccctgc 102875 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1000 aagtactggattgccaagaactcgtggagcaa 1031 ||||||||||| ||||||||||||||| |||| Sbjct: 95796 aagtactggatagccaagaactcgtggggcaa 95765
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 145 bits (73), Expect = 5e-31 Identities = 153/179 (85%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 946 gtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagtac 1005 ||||||||||||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 23279 gtgaaccacgccgtcgccatcgtcggctactgcgagggcttcggcggcg---acaagtac 23335 Query: 1006 tggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgca 1065 ||||| ||||||||||||||| ||| ||||||||| || || || || ||||||||||| Sbjct: 23336 tggatcgccaagaactcgtggggcagcgactggggcgagcagggctacgtctacctcgcc 23395 Query: 1066 aaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctacccgac 1124 ||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 23396 aaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgac 23454 Score = 139 bits (70), Expect = 3e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||||||| |||||| ||||| || |||||||||| ||||| || Sbjct: 22871 tcgtgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggc 22930 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 22931 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcagcggctgc 22990 Query: 661 ggcggcggcc 670 ||||||||| Sbjct: 22991 agcggcggcc 23000 Score = 81.8 bits (41), Expect = 6e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| |||| ||||| ||| || Sbjct: 18159 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgcagatcaggacggggaag 18100 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | |||| || ||||||| || |||||||||||||||| ||| |||| |||| | Sbjct: 18099 ctgacgccgctatcggagcaggagctggtggactgcgacaccggcagctccgggtgcgcc 18040 Query: 664 ggcggccac 672 ||||||||| Sbjct: 18039 ggcggccac 18031 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaag 522 |||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 22728 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaag 22776 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Minus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| ||||||| |||||| ||||| ||||| | ||||||||||||||| Sbjct: 17845 gcagccggtgacggcgtacatcgacgcgagcgggccggcgttccagttctac 17794 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 22606 atgaacaggttcggcgacctca 22627
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 145 bits (73), Expect = 5e-31 Identities = 153/179 (85%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 946 gtgaaccacgccgtcaccatcgtcggctactgcgagggtcccggcgagggaaacaagtac 1005 ||||||||||||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 171950 gtgaaccacgccgtcgccatcgtcggctactgcgagggcttcggcggcg---acaagtac 172006 Query: 1006 tggattgccaagaactcgtggagcaacgactggggtgaacaaggatatgtctacctcgca 1065 ||||| ||||||||||||||| ||| ||||||||| || || || || ||||||||||| Sbjct: 172007 tggatcgccaagaactcgtggggcagcgactggggcgagcagggctacgtctacctcgcc 172066 Query: 1066 aaggacgtggcatggtccacgggcacatgcggcctcgccacctcgcccttctacccgac 1124 ||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 172067 aaggacgtgtggtggccgcagggcacctgcggcctcgccacctcgcccttctacccgac 172125 Score = 139 bits (70), Expect = 3e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 541 tcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggg 600 |||||||||||||||||||||| |||||| ||||| || |||||||||| ||||| || Sbjct: 171542 tcgtgctgggcgttcgcggcggcggcggccatcgaggggctgaacaagatcaggaccggc 171601 Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgc 660 ||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||||||| Sbjct: 171602 gagctggtgtcgctgtcggagcaggtgatggtggactgcgacaccgggagcagcggctgc 171661 Query: 661 ggcggcggcc 670 ||||||||| Sbjct: 171662 agcggcggcc 171671 Score = 81.8 bits (41), Expect = 6e-12 Identities = 107/129 (82%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| |||| ||||| ||| || Sbjct: 166830 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgcagatcaggacggggaag 166771 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | |||| || ||||||| || |||||||||||||||| ||| |||| |||| | Sbjct: 166770 ctgacgccgctatcggagcaggagctggtggactgcgacaccggcagctccgggtgcgcc 166711 Query: 664 ggcggccac 672 ||||||||| Sbjct: 166710 ggcggccac 166702 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 474 gccgtgctgcgttgactggcgctccagcggggctgtcaccggcgtcaag 522 |||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 171399 gccgtgctgcgtcgactggcgctccagcggcgccgtcaccggcgtcaag 171447 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Minus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| ||||||| |||||| ||||| ||||| | ||||||||||||||| Sbjct: 166516 gcagccggtgacggcgtacatcgacgcgagcgggccggcgttccagttctac 166465 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 atgaacaggttcggcgacctca 382 |||||||||||||||||||||| Sbjct: 171277 atgaacaggttcggcgacctca 171298
>dbj|AK243297.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100053I01, full insert sequence Length = 1388 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 508 gtcaccggcgtcaagcaccaaggcacttgtggatcgtgctgggcgttcgcggcggtggcg 567 ||||||||||||||| |||||||| | || || || |||||||||||||||||||||||| Sbjct: 528 gtcaccggcgtcaaggaccaaggcgcctgcgggtcttgctgggcgttcgcggcggtggcg 587 Query: 568 gcgatcgaaggcatgaacaagattaggacaggggagctggtgtcgctgtccgagcaggta 627 |||||||| || ||| ||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 588 gcgatcgaggggctgacgaagatcaggacggggcagctgacgccgctgtcggagcaggag 647 Query: 628 ctcgtggactgcgacaccgtgagcaccggctgcggcggcgg 668 || ||||||||||||||| |||| ||| ||||||||||| Sbjct: 648 ctggtggactgcgacaccaacagcaacgggtgcggcggcgg 688 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 878 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 929
>ref|NM_001049505.1| Oryza sativa (japonica cultivar-group) Os01g0347600 (Os01g0347600) mRNA, complete cds Length = 1032 Score = 113 bits (57), Expect = 2e-21 Identities = 135/161 (83%) Strand = Plus / Plus Query: 508 gtcaccggcgtcaagcaccaaggcacttgtggatcgtgctgggcgttcgcggcggtggcg 567 ||||||||||||||| |||||||| | || || || |||||||||||||||||||||||| Sbjct: 409 gtcaccggcgtcaaggaccaaggcgcctgcgggtcttgctgggcgttcgcggcggtggcg 468 Query: 568 gcgatcgaaggcatgaacaagattaggacaggggagctggtgtcgctgtccgagcaggta 627 |||||||| || ||| ||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 469 gcgatcgaggggctgacgaagatcaggacggggcagctgacgccgctgtcggagcaggag 528 Query: 628 ctcgtggactgcgacaccgtgagcaccggctgcggcggcgg 668 || ||||||||||||||| |||| ||| ||||||||||| Sbjct: 529 ctggtggactgcgacaccaacagcaacgggtgcggcggcgg 569 Score = 56.0 bits (28), Expect = 3e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| |||||||||||||| ||||| ||||| | ||||||||||||||| Sbjct: 759 gcagccggtgacggtgtacatcgacgcgagcgggccggcgttccagttctac 810
>gb|AY109416.1| Zea mays CL694_1 mRNA sequence Length = 3272 Score = 85.7 bits (43), Expect = 4e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| |||||||||| |||| ||| | Sbjct: 3184 tgctgggcgttctcggcggtggcggcggtggaagggctgaacaagatccggacggggcgg 3125 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| || |||||||||||| Sbjct: 3124 ctggtgtcgctgtcggagcaggagctggtggactgcgac 3086
>ref|NM_001070095.1| Oryza sativa (japonica cultivar-group) Os09g0497500 (Os09g0497500) mRNA, complete cds Length = 1322 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 534 ttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattag 593 |||||| || |||||||||||| | |||||||||||||| || || || ||| |||| | Sbjct: 491 ttgtggttcttgctgggcgttctccgcggtggcggcgatagaggggatcaaccagatcaa 550 Query: 594 gacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 || || ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 551 gaacggcgagctggtgtcgctgtcggagcaggagctcgtggactgcgac 599
>ref|NM_001048939.1| Oryza sativa (japonica cultivar-group) Os01g0217200 (Os01g0217200) mRNA, complete cds Length = 1050 Score = 81.8 bits (41), Expect = 6e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||||||||||||||||||||||| || ||| |||| ||||| ||| || Sbjct: 436 tgctgggcgttcgcggcggtggcggcgatcgaggggctgacgcagatcaggacggggaag 495 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccgtgagcaccggctgcggc 663 ||| | |||| || ||||||| || |||||||||||||||| ||| |||| |||| | Sbjct: 496 ctgacgccgctatcggagcaggagctggtggactgcgacaccggcagctccgggtgcgcc 555 Query: 664 ggcggccac 672 ||||||||| Sbjct: 556 ggcggccac 564 Score = 48.1 bits (24), Expect = 0.080 Identities = 45/52 (86%) Strand = Plus / Plus Query: 858 gcagcccgtgacggtgtacattgacgccagcggttccgcgttccagttctac 909 |||||| ||||||| |||||| ||||| ||||| | ||||||||||||||| Sbjct: 750 gcagccggtgacggcgtacatcgacgcgagcgggccggcgttccagttctac 801
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 534 ttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattag 593 |||||| || |||||||||||| | |||||||||||||| || || || ||| |||| | Sbjct: 482 ttgtggttcttgctgggcgttctccgcggtggcggcgatagaggggatcaaccagatcaa 541 Query: 594 gacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 || || ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 542 gaacggcgagctggtgtcgctgtcggagcaggagctcgtggactgcgac 590
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 534 ttgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattag 593 |||||| || |||||||||||| | |||||||||||||| || || || ||| |||| | Sbjct: 491 ttgtggttcttgctgggcgttctccgcggtggcggcgatagaggggatcaaccagatcaa 550 Query: 594 gacaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 || || ||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 551 gaacggcgagctggtgtcgctgtcggagcaggagctcgtggactgcgac 599
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 77.8 bits (39), Expect = 9e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| || ||||| ||||| ||| || Sbjct: 71974 tgctgggcgttctcggcggtggcggcggtggaagggctggcgaagatcaggacggggcag 71915 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| || |||||||||||| Sbjct: 71914 ctggtgtcgctgtcggagcaggagctggtggactgcgac 71876
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 77.8 bits (39), Expect = 9e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| || ||||| ||||| ||| || Sbjct: 30581 tgctgggcgttctcggcggtggcggcggtggaagggctggcgaagatcaggacggggcag 30522 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| || |||||||||||| Sbjct: 30521 ctggtgtcgctgtcggagcaggagctggtggactgcgac 30483
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 77.8 bits (39), Expect = 9e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| || ||||| ||||| ||| || Sbjct: 40510 tgctgggcgttctcggcggtggcggcggtggaagggctggcgaagatcaggacggggcag 40569 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| || |||||||||||| Sbjct: 40570 ctggtgtcgctgtcggagcaggagctggtggactgcgac 40608
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 77.8 bits (39), Expect = 9e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| | |||||||||||||| || || || ||| |||| | || || ||| Sbjct: 18948783 tgctgggcgttctccgcggtggcggcgatagaggggatcaaccagatcaagaacggcgag 18948724 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| ||||||||||||||| Sbjct: 18948723 ctggtgtcgctgtcggagcaggagctcgtggactgcgac 18948685 Score = 46.1 bits (23), Expect = 0.31 Identities = 35/39 (89%) Strand = Plus / Minus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgc 639 ||||||||||||||||| ||||||| ||||| |||||| Sbjct: 19683002 gagctggtgtcgctgtcagagcaggagctcgtagactgc 19682964 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Minus Query: 538 ggatcgtgctgggcgttcgcggcggtggcgg 568 |||||||||||||||||| || ||||||||| Sbjct: 22051066 ggatcgtgctgggcgttctcgacggtggcgg 22051036
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 77.8 bits (39), Expect = 9e-11 Identities = 84/99 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| || ||||| ||||| ||| || Sbjct: 30823233 tgctgggcgttctcggcggtggcggcggtggaagggctggcgaagatcaggacggggcag 30823292 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||| ||||||| || |||||||||||| Sbjct: 30823293 ctggtgtcgctgtcggagcaggagctggtggactgcgac 30823331
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence Length = 794 Score = 75.8 bits (38), Expect = 4e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 535 tgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattagg 594 ||||| ||||||||||| ||| || ||||||||| | |||||||||| || |||| || Sbjct: 48 tgtgggtcgtgctgggccttctcgacggtggcggtggtcgaaggcatctaccagatccgg 107 Query: 595 acaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacac 644 || ||| |||||||||| ||||| ||||||| || |||||||||||||| Sbjct: 108 acggggaagctggtgtccctgtcggagcaggagctggtggactgcgacac 157
>emb|CT834889.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105E22, full insert sequence Length = 1424 Score = 73.8 bits (37), Expect = 1e-09 Identities = 109/133 (81%) Strand = Plus / Plus Query: 508 gtcaccggcgtcaagcaccaaggcacttgtggatcgtgctgggcgttcgcggcggtggcg 567 ||||||||||||||| |||| ||| | || || || ||||||||||||||||||||||| Sbjct: 588 gtcaccggcgtcaaggaccagggcgcctgcgggtcaagctgggcgttcgcggcggtggcg 647 Query: 568 gcgatcgaaggcatgaacaagattaggacaggggagctggtgtcgctgtccgagcaggta 627 ||||| || || ||| ||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 648 gcgatggaggggctgatgaagatcaggacggggcagctgacgccgctgtcggagcaggag 707 Query: 628 ctcgtggactgcg 640 || |||||||||| Sbjct: 708 ctggtggactgcg 720 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1000 aagtactggattgccaagaactcgtggagcaa 1031 ||||||||||| ||||||||||||||| |||| Sbjct: 1098 aagtactggatagccaagaactcgtggggcaa 1129
>ref|NM_001049461.1| Oryza sativa (japonica cultivar-group) Os01g0330200 (Os01g0330200) mRNA, complete cds Length = 1074 Score = 73.8 bits (37), Expect = 1e-09 Identities = 109/133 (81%) Strand = Plus / Plus Query: 508 gtcaccggcgtcaagcaccaaggcacttgtggatcgtgctgggcgttcgcggcggtggcg 567 ||||||||||||||| |||| ||| | || || || ||||||||||||||||||||||| Sbjct: 433 gtcaccggcgtcaaggaccagggcgcctgcgggtcaagctgggcgttcgcggcggtggcg 492 Query: 568 gcgatcgaaggcatgaacaagattaggacaggggagctggtgtcgctgtccgagcaggta 627 ||||| || || ||| ||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 493 gcgatggaggggctgatgaagatcaggacggggcagctgacgccgctgtcggagcaggag 552 Query: 628 ctcgtggactgcg 640 || |||||||||| Sbjct: 553 ctggtggactgcg 565 Score = 48.1 bits (24), Expect = 0.080 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1000 aagtactggattgccaagaactcgtggagcaa 1031 ||||||||||| ||||||||||||||| |||| Sbjct: 943 aagtactggatagccaagaactcgtggggcaa 974
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A Length = 1299 Score = 71.9 bits (36), Expect = 5e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || || | | |||| | || ||||| |||||||| ||||| ||| || Sbjct: 508 tgctgggcgttctcgacgatcgtggcggtggagggcatcaacaagatcaggacggggaag 567 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgaca 643 |||||||||||||| ||||||| ||| |||||||||||| Sbjct: 568 ctggtgtcgctgtcggagcaggagctcatggactgcgaca 607
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A Length = 2752 Score = 71.9 bits (36), Expect = 5e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || || | | |||| | || ||||| |||||||| ||||| ||| || Sbjct: 1702 tgctgggcgttctcgacgatcgtggcggtggagggcatcaacaagatcaggacggggaag 1761 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgaca 643 |||||||||||||| ||||||| ||| |||||||||||| Sbjct: 1762 ctggtgtcgctgtcggagcaggagctcatggactgcgaca 1801
>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds Length = 1328 Score = 71.9 bits (36), Expect = 5e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || || | | |||| | || ||||| |||||||| ||||| ||| || Sbjct: 516 tgctgggcgttctcgacgatcgtggcggtggagggcatcaacaagatcaggacggggaag 575 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgaca 643 |||||||||||||| ||||||| ||| |||||||||||| Sbjct: 576 ctggtgtcgctgtcggagcaggagctcatggactgcgaca 615
>ref|NM_001074162.1| Oryza sativa (japonica cultivar-group) Os11g0255300 (Os11g0255300) mRNA, complete cds Length = 1509 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 597 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 656 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 657 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 699
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 33168 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 33227 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 33228 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 33270
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 8299232 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 8299173 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 8299172 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 8299130 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcg 570 |||||||||||||||||||||| Sbjct: 18914712 ggcgttcgcggcggtggcggcg 18914733
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 592 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 651 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 652 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 694
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 598 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 657 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 658 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 700
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 61.9 bits (31), Expect = 5e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| || ||||||||||| | || || |||||||||| | ||| ||| | Sbjct: 1702 tgctgggcgttctcgacggtggcggcggtggagggagtgaacaagatcaagacggggagg 1761 Query: 604 ctggtgtcgctgtccgagcaggtactcgtggactgcgacaccg 646 ||||| ||||||| ||||||| || |||||||||||||||| Sbjct: 1762 ttggtgacgctgtcggagcaggagctggtggactgcgacaccg 1804
>gb|AY110047.1| Zea mays CL878_1 mRNA sequence Length = 1403 Score = 61.9 bits (31), Expect = 5e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 535 tgtggatcgtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattagg 594 ||||| || |||||||||||| | || || ||||| ||||| ||||| ||| |||| | | Sbjct: 522 tgtggctcttgctgggcgttctccgccgttgcggccatcgagggcatcaaccagatcaag 581 Query: 595 acaggggagctggtgtcgctgtccgagcaggtactcgtggactgcgacacc 645 | ||| |||||||||| ||||| ||||||| || ||||||||||||||| Sbjct: 582 aacgggaagctggtgtccctgtcggagcaggagctggtggactgcgacacc 632
>gb|AY112580.1| Zea mays CL875_1 mRNA sequence Length = 1553 Score = 60.0 bits (30), Expect = 2e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||| |||| | ||| |||| ||||||| |||| | |||||| | ||||||| || Sbjct: 533 tgctgggcattcgtgacggcggcgacgatcgagagcatcaccaagatcacgacagggaag 592 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 593 ctggtgtcgctgtcggagcagg 614 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 947 tgaaccacgccgtcaccatcgtcggctac 975 ||||||||||| ||||| ||||||||||| Sbjct: 927 tgaaccacgccatcaccgtcgtcggctac 955
>gb|AY244511.1| Triticum monococcum cultivar G2528 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 58.0 bits (29), Expect = 8e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| ||| |||||| | || ||| | Sbjct: 81 tgctgggcgttctcggcggtggcggcggtggaagggctgaccaagatccgcacggggcgg 22 Query: 604 ctggtgtcgctgtccgagcag 624 |||||||||||||| |||||| Sbjct: 21 ctggtgtcgctgtcggagcag 1 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 508 gtcaccggcgtcaagcaccaaggcacttg 536 ||||||||||||||| |||||||| |||| Sbjct: 521 gtcaccggcgtcaaggaccaaggctcttg 493
>gb|AY244510.1| Triticum monococcum cultivar G1777 cysteine proteinase (CYS) gene, partial cds Length = 679 Score = 58.0 bits (29), Expect = 8e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| |||||||||||||| | ||||| ||| |||||| | || ||| | Sbjct: 81 tgctgggcgttctcggcggtggcggcggtggaagggctgaccaagatccgcacggggcgg 22 Query: 604 ctggtgtcgctgtccgagcag 624 |||||||||||||| |||||| Sbjct: 21 ctggtgtcgctgtcggagcag 1 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 508 gtcaccggcgtcaagcaccaaggcacttg 536 ||||||||||||||| |||||||| |||| Sbjct: 521 gtcaccggcgtcaaggaccaaggctcttg 493
>gb|AY110841.1| Zea mays CL908_1 mRNA sequence Length = 916 Score = 58.0 bits (29), Expect = 8e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 553 ttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggagctggtgtcg 612 |||||| |||||||||||||||||||| || ||||||| ||||| || |||| || || Sbjct: 273 ttcgcgacggtggcggcgatcgaaggcctgcacaagataaggacgggccagcttgtctcc 332 Query: 613 ctgtccgagcagg 625 ||||| ||||||| Sbjct: 333 ctgtcggagcagg 345
>ref|NM_001050097.1| Oryza sativa (japonica cultivar-group) Os01g0613500 (Os01g0613500) mRNA, complete cds Length = 1402 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||||||||||||||| Sbjct: 512 tgctgggcgttcgcggcggtggcggcga 539
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||||||||||||||| Sbjct: 86423 tgctgggcgttcgcggcggtggcggcga 86396 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Minus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||| ||||||||||| Sbjct: 94145 tgctgggcgttcgcggtggtggcggcga 94118
>dbj|AK070448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F12, full insert sequence Length = 1403 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||||||||||||||| Sbjct: 513 tgctgggcgttcgcggcggtggcggcga 540
>ref|NM_001070471.1| Oryza sativa (japonica cultivar-group) Os09g0562700 (Os09g0562700) mRNA, partial cds Length = 904 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 535 tgtggatcgtgctgggcgttcgcggcggtggcgg 568 ||||||||||||||||||||| || ||||||||| Sbjct: 88 tgtggatcgtgctgggcgttctcgacggtggcgg 121
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 19660 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 19701
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 36753 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 36794
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 119870 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 119911
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||||| ||||||| ||||||||||||||| Sbjct: 14928235 gagctggtgtcgctgttggagcaggagctcgtggactgcgac 14928276
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 22607122 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 22607163 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 24434080 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 24434121
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 26918937 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 26918978 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcga 571 ||||||||||||||||||||||| Sbjct: 3800476 ggcgttcgcggcggtggcggcga 3800498 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ggagtcggaggtgagggagaggttc 177 |||| |||||||||||||||||||| Sbjct: 2241444 ggagacggaggtgagggagaggttc 2241420
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 ||||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 97480 gagctggtgtcgctgtcggagcaggagctcgtagactgcgac 97521
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 535 tgtggatcgtgctgggcgttcgcggcggtggcgg 568 ||||||||||||||||||||| || ||||||||| Sbjct: 88 tgtggatcgtgctgggcgttctcgacggtggcgg 121
>ref|XM_313836.2| Anopheles gambiae str. PEST ENSANGP00000012227 (ENSANGG00000009738), partial mRNA Length = 993 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 526 caaggcacttgtggatcgtgctgggc 551 |||||||||||||||||||||||||| Sbjct: 313 caaggcacttgtggatcgtgctgggc 338
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgcgac 642 |||||||||||||||| ||||||| ||||||||||||||| Sbjct: 153612 gagctggtgtcgctgttggagcaggagctcgtggactgcgac 153571
>gb|AF019145.2|AF019145 Zea mays cysteine protease Mir1 (mir1) mRNA, complete cds Length = 1463 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 583 gtgctgggcgttctcggcggtggcggccatcga 615
>gb|DQ147253.1| Zea diploperennis isolate d8 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 525 gtgctgggcgttctcggcggtggcggccatcga 557
>gb|DQ147252.1| Zea diploperennis isolate d7 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 525 gtgctgggcgttctcggcggtggcggccatcga 557
>gb|DQ147250.1| Zea diploperennis isolate d5 cysteine protease Mir1 gene, partial cds Length = 1013 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 518 gtgctgggcgttctcggcggtggcggccatcga 550
>gb|DQ147249.1| Zea diploperennis isolate d4_116 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 525 gtgctgggcgttctcggcggtggcggccatcga 557
>gb|DQ147248.1| Zea diploperennis isolate d4 cysteine protease Mir1 gene, partial cds Length = 1018 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 523 gtgctgggcgttctcggcggtggcggccatcga 555
>gb|DQ147247.1| Zea diploperennis isolate d3 cysteine protease Mir1 gene, partial cds Length = 1015 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 523 gtgctgggcgttctcggcggtggcggccatcga 555
>gb|DQ147246.1| Zea diploperennis isolate d2 cysteine protease Mir1 gene, partial cds Length = 1020 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 525 gtgctgggcgttctcggcggtggcggccatcga 557
>gb|DQ147245.1| Zea diploperennis isolate d1 cysteine protease Mir1 (mir1) gene, partial cds Length = 1019 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 523 gtgctgggcgttctcggcggtggcggccatcga 555
>gb|DQ147244.1| Zea mays subsp. parviglumis isolate p15 cysteine protease Mir1 (mir1) gene, partial cds Length = 1014 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 514 gtgctgggcgttctcggcggtggcggccatcga 546
>gb|DQ147243.1| Zea mays subsp. parviglumis isolate p14 cysteine protease Mir1 (mir1) gene, partial cds Length = 1025 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 524 gtgctgggcgttctcggcggtggcggccatcga 556
>gb|DQ147242.1| Zea mays subsp. parviglumis isolate p13 cysteine protease Mir1 (mir1) gene, partial cds Length = 994 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 513 gtgctgggcgttctcggcggtggcggccatcga 545
>gb|DQ147241.1| Zea mays subsp. parviglumis isolate p12 cysteine protease Mir1 (mir1) gene, partial cds Length = 1006 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 511 gtgctgggcgttctcggcggtggcggccatcga 543
>gb|DQ147240.1| Zea mays subsp. parviglumis isolate p11 cysteine protease Mir1 (mir1) gene, partial cds Length = 1038 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 532 gtgctgggcgttctcggcggtggcggccatcga 564
>gb|DQ147239.1| Zea mays subsp. parviglumis isolate p9 cysteine protease Mir1 (mir1) gene, partial cds Length = 1023 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 522 gtgctgggcgttctcggcggtggcggccatcga 554
>gb|DQ147238.1| Zea mays subsp. parviglumis isolate p8 cysteine protease Mir1 (mir1) gene, partial cds Length = 1036 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 530 gtgctgggcgttctcggcggtggcggccatcga 562
>gb|DQ147237.1| Zea mays subsp. parviglumis isolate p6 cysteine protease Mir1 (mir1) gene, partial cds Length = 1045 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 540 gtgctgggcgttctcggcggtggcggccatcga 572
>gb|DQ147236.1| Zea mays subsp. parviglumis isolate p5 cysteine protease Mir1 (mir1) gene, partial cds Length = 1025 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 523 gtgctgggcgttctcggcggtggcggccatcga 555
>gb|DQ147235.1| Zea mays subsp. parviglumis isolate p4 cysteine protease Mir1 (mir1) gene, partial cds Length = 997 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 522 gtgctgggcgttctcggcggtggcggccatcga 554
>gb|DQ147234.1| Zea mays subsp. parviglumis isolate p3 cysteine protease Mir1 (mir1) gene, partial cds Length = 1031 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 526 gtgctgggcgttctcggcggtggcggccatcga 558
>gb|DQ147233.1| Zea mays subsp. parviglumis isolate p2 cysteine protease Mir1 (mir1) gene, partial cds Length = 987 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 510 gtgctgggcgttctcggcggtggcggccatcga 542
>gb|DQ147232.1| Zea mays subsp. parviglumis isolate p1 cysteine protease Mir1 (mir1) gene, partial cds Length = 1021 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||||||||| ||||| Sbjct: 520 gtgctgggcgttctcggcggtggcggccatcga 552
>ref|NM_001050098.1| Oryza sativa (japonica cultivar-group) Os01g0613800 (Os01g0613800) mRNA, complete cds Length = 1383 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||| ||||||||||| Sbjct: 561 tgctgggcgttcgcggtggtggcggcga 588
>gb|AC105306.13| Bos taurus clone rp42-158g13, complete sequence Length = 196377 Score = 48.1 bits (24), Expect = 0.080 Identities = 33/36 (91%) Strand = Plus / Minus Query: 1176 aatgcaaaattattatttttactatactttccttta 1211 ||||||||||||||||||| || || |||||||||| Sbjct: 15445 aatgcaaaattattattttaaccatgctttccttta 15410
>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome Length = 139342 Score = 48.1 bits (24), Expect = 0.080 Identities = 24/24 (100%) Strand = Plus / Plus Query: 538 ggatcgtgctgggcgttcgcggcg 561 |||||||||||||||||||||||| Sbjct: 50007 ggatcgtgctgggcgttcgcggcg 50030
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcga 571 |||||||||||||||| ||||||||||| Sbjct: 561 tgctgggcgttcgcggtggtggcggcga 588
>gb|AY111799.1| Zea mays CL872_-2 mRNA sequence Length = 1761 Score = 48.1 bits (24), Expect = 0.080 Identities = 42/48 (87%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagat 590 ||||||||||||| |||||||||| ||| | ||||| || |||||||| Sbjct: 616 gtgctgggcgttctcggcggtggcagcggtggaagggatcaacaagat 663
>gb|AF019146.1|AF019146 Zea mays cysteine proteinase Mir2 (mir2) mRNA, complete cds Length = 1761 Score = 48.1 bits (24), Expect = 0.080 Identities = 42/48 (87%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagat 590 ||||||||||||| |||||||||| ||| | ||||| || |||||||| Sbjct: 616 gtgctgggcgttctcggcggtggcagcggtggaagggatcaacaagat 663
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds Length = 1353 Score = 48.1 bits (24), Expect = 0.080 Identities = 27/28 (96%) Strand = Plus / Plus Query: 999 caagtactggattgccaagaactcgtgg 1026 |||||||||||| ||||||||||||||| Sbjct: 1011 caagtactggatcgccaagaactcgtgg 1038
>gb|AC167919.2| Mycosphaerella graminicola clone JGIBBWB-5H21, complete sequence Length = 35458 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 241 caagtcttcaagaacaacaccaactcc 267 |||||||||||||||||| |||||||| Sbjct: 24317 caagtcttcaagaacaaccccaactcc 24343
>ref|NM_001052560.1| Oryza sativa (japonica cultivar-group) Os02g0170000 (Os02g0170000) mRNA, complete cds Length = 2054 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcga 571 ||||||||||||||||||||||| Sbjct: 1650 ggcgttcgcggcggtggcggcga 1672
>dbj|AB262584.1| Triticum aestivum mRNA for cysteine proteinase, complete cds Length = 1439 Score = 46.1 bits (23), Expect = 0.31 Identities = 38/43 (88%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcaggtactcgtggactgcgacac 644 |||||||||||||||| ||||||| ||| | ||||||||||| Sbjct: 603 agctggtgtcgctgtcggagcaggagctcatcgactgcgacac 645
>gb|BT018670.1| Zea mays clone EL01N0510D09.d mRNA sequence Length = 1291 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 120 cccgccgccggcgcccccggcgt 142 ||||||||||||||||||||||| Sbjct: 218 cccgccgccggcgcccccggcgt 196
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 46.1 bits (23), Expect = 0.31 Identities = 35/39 (89%) Strand = Plus / Minus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgc 639 ||||||||||||||||| ||||||| ||||| |||||| Sbjct: 166077 gagctggtgtcgctgtcagagcaggagctcgtagactgc 166039
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 46.1 bits (23), Expect = 0.31 Identities = 35/39 (89%) Strand = Plus / Minus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgc 639 ||||||||||||||||| ||||||| ||||| |||||| Sbjct: 10269 gagctggtgtcgctgtcagagcaggagctcgtagactgc 10231
>emb|BX067338.1|CNS09O4E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC51AA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 993 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 925 agctggtgtcgctgtccgagcag 903
>emb|BX067337.1|CNS09O4D Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51AA02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 965 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 789 agctggtgtcgctgtccgagcag 811
>emb|BX066012.1|CNS09N3K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5AF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 822 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 591 agctggtgtcgctgtccgagcag 613
>emb|BX043358.1|CNS095MA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15DF10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 607 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 589 agctggtgtcgctgtccgagcag 567
>emb|BX035610.1|CNS08ZN2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7AB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 942 agctggtgtcgctgtccgagcag 920
>emb|BX035609.1|CNS08ZN1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA7AB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 714 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 522 agctggtgtcgctgtccgagcag 544
>emb|BX031212.1|CNS08W8W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 910 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 729 agctggtgtcgctgtccgagcag 751
>emb|BX030429.1|CNS08VN5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA45BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 961 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 918 agctggtgtcgctgtccgagcag 896
>emb|BX030428.1|CNS08VN4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA45BF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 490 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 360 agctggtgtcgctgtccgagcag 382
>emb|BX030073.1|CNS08VD9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA44DF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1040 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 783 agctggtgtcgctgtccgagcag 805
>emb|BX026447.1|CNS08SKJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4CH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 497 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 450 agctggtgtcgctgtccgagcag 428
>emb|BX026446.1|CNS08SKI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4CH09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1003 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 780 agctggtgtcgctgtccgagcag 802
>emb|BX021933.1|CNS08P35 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA32CC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 537 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 446 agctggtgtcgctgtccgagcag 468
>emb|BX017985.1|CNS08M1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA27AG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 994 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 798 agctggtgtcgctgtccgagcag 776
>emb|BX017984.1|CNS08M1G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA27AG02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 601 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 363 agctggtgtcgctgtccgagcag 385
>emb|BX008183.1|CNS08EH7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA13CB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 954 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Minus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 945 agctggtgtcgctgtccgagcag 923
>emb|BX008182.1|CNS08EH6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 988 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 779 agctggtgtcgctgtccgagcag 801
>emb|BX007759.1|CNS08E5F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA12DF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 991 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 475 agctggtgtcgctgtccgagcag 497
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcg 570 |||||||||||| |||||||||||||| Sbjct: 4334 tgctgggcgttctcggcggtggcggcg 4360 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 508 gtcaccggcgtcaagcaccaaggcacttg 536 ||||||||||||||| |||||||| |||| Sbjct: 3822 gtcaccggcgtcaaggaccaaggctcttg 3850
>ref|XM_393843.2| PREDICTED: Apis mellifera similar to CG3996-PA, transcript variant 1 (LOC410363), mRNA Length = 6648 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1101 cgccacctcgcccttctacccga 1123 ||||||||||||||||||||||| Sbjct: 3735 cgccacctcgcccttctacccga 3757
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 46.1 bits (23), Expect = 0.31 Identities = 29/31 (93%) Strand = Plus / Minus Query: 538 ggatcgtgctgggcgttcgcggcggtggcgg 568 |||||||||||||||||| || ||||||||| Sbjct: 93130 ggatcgtgctgggcgttctcgacggtggcgg 93100
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 46.1 bits (23), Expect = 0.31 Identities = 35/39 (89%) Strand = Plus / Minus Query: 601 gagctggtgtcgctgtccgagcaggtactcgtggactgc 639 ||||||||||||||||| ||||||| ||||| |||||| Sbjct: 28688 gagctggtgtcgctgtcagagcaggagctcgtagactgc 28650
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcga 571 ||||||||||||||||||||||| Sbjct: 56808 ggcgttcgcggcggtggcggcga 56830
>dbj|AK119658.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H09, full insert sequence Length = 1558 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcga 571 ||||||||||||||||||||||| Sbjct: 1155 ggcgttcgcggcggtggcggcga 1177
>dbj|AK065022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G04, full insert sequence Length = 2075 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcga 571 ||||||||||||||||||||||| Sbjct: 1650 ggcgttcgcggcggtggcggcga 1672
>ref|XM_320687.2| Anopheles gambiae str. PEST ENSANGP00000020002 (ENSANGG00000017513), partial mRNA Length = 1558 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 602 agctggtgtcgctgtccgagcag 624 ||||||||||||||||||||||| Sbjct: 611 agctggtgtcgctgtccgagcag 633
>dbj|AK243486.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100073G12, full insert sequence Length = 1269 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcg 570 |||||||||||||||||||||| Sbjct: 103 ggcgttcgcggcggtggcggcg 124
>ref|NM_001060748.1| Oryza sativa (japonica cultivar-group) Os04g0670500 (Os04g0670500) mRNA, complete cds Length = 1720 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| ||||||| || || | || ||||| |||||||| || || ||| Sbjct: 649 tgctgggcgttctcggcggtcgccgccgtggagggcatcaacaagatcgtcaccggcgag 708 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 709 ctggtgtcgctgtcggagcagg 730
>ref|NM_001059594.1| Oryza sativa (japonica cultivar-group) Os04g0472200 (Os04g0472200) mRNA, complete cds Length = 1166 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgccgccggcgcccccggcgt 142 |||||||||||||||||||||| Sbjct: 311 ccgccgccggcgcccccggcgt 332
>ref|NM_001058781.1| Oryza sativa (japonica cultivar-group) Os04g0208200 (Os04g0208200) mRNA, complete cds Length = 1050 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggc 569 |||||||||||| ||||||||||||| Sbjct: 457 tgctgggcgttctcggcggtggcggc 482
>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete sequence Length = 95419 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| ||||||| || || | || ||||| |||||||| || || ||| Sbjct: 23089 tgctgggcgttctcggcggtcgccgccgtggagggcatcaacaagatcgtcaccggcgag 23148 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 23149 ctggtgtcgctgtcggagcagg 23170
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcg 570 |||||||||||||||||||||| Sbjct: 179079 ggcgttcgcggcggtggcggcg 179100
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 ggcgttcgcggcggtggcggcg 570 |||||||||||||||||||||| Sbjct: 18434 ggcgttcgcggcggtggcggcg 18455
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1179 gcaaaattattatttttactatactt 1204 ||||||||||||||| |||||||||| Sbjct: 875731 gcaaaattattatttatactatactt 875756
>gb|AC117532.2| Homo sapiens chromosome 5 clone RP11-648M2, complete sequence Length = 177782 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1184 attattatttttactatacttt 1205 |||||||||||||||||||||| Sbjct: 80675 attattatttttactatacttt 80654
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggc 569 |||||||||||| ||||||||||||| Sbjct: 7212951 tgctgggcgttctcggcggtggcggc 7212976 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgccgccggcgcccccggcgt 142 |||||||||||||||||||||| Sbjct: 23575727 ccgccgccggcgcccccggcgt 23575706 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| ||||||| || || | || ||||| |||||||| || || ||| Sbjct: 34240450 tgctgggcgttctcggcggtcgccgccgtggagggcatcaacaagatcgtcaccggcgag 34240509 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 34240510 ctggtgtcgctgtcggagcagg 34240531
>gb|AC073427.7| Homo sapiens BAC clone RP11-746K19 from 4, complete sequence Length = 157152 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1184 attattatttttactatacttt 1205 |||||||||||||||||||||| Sbjct: 49501 attattatttttactatacttt 49480
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| ||||||| || || | || ||||| |||||||| || || ||| Sbjct: 151832 tgctgggcgttctcggcggtcgccgccgtggagggcatcaacaagatcgtcaccggcgag 151891 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 151892 ctggtgtcgctgtcggagcagg 151913
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgccgccggcgcccccggcgt 142 |||||||||||||||||||||| Sbjct: 18408 ccgccgccggcgcccccggcgt 18387
>dbj|AB109216.1| Triticum aestivum mRNA for cysteine protease, complete cds Length = 1260 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1001 agtactggattgccaagaactcgtgg 1026 |||||||||| ||||||||||||||| Sbjct: 1016 agtactggatcgccaagaactcgtgg 1041
>dbj|AK110545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B08, full insert sequence Length = 1166 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgccgccggcgcccccggcgt 142 |||||||||||||||||||||| Sbjct: 311 ccgccgccggcgcccccggcgt 332
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full insert sequence Length = 1722 Score = 44.1 bits (22), Expect = 1.2 Identities = 67/82 (81%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggcgatcgaaggcatgaacaagattaggacaggggag 603 |||||||||||| ||||||| || || | || ||||| |||||||| || || ||| Sbjct: 649 tgctgggcgttctcggcggtcgccgccgtggagggcatcaacaagatcgtcaccggcgag 708 Query: 604 ctggtgtcgctgtccgagcagg 625 |||||||||||||| ||||||| Sbjct: 709 ctggtgtcgctgtcggagcagg 730
>gb|AY103898.1| Zea mays PCO115124 mRNA sequence Length = 1622 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 cccgccgccggcgcccccggcg 141 |||||||||||||||||||||| Sbjct: 464 cccgccgccggcgcccccggcg 443
>ref|XM_724266.1| Plasmodium yoelii yoelii str. 17XNL casein kinase II subunit beta (PY01577) partial mRNA Length = 1059 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1169 ttgtgataatgcaaaattatta 1190 |||||||||||||||||||||| Sbjct: 747 ttgtgataatgcaaaattatta 768
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggc 569 |||||||||||| ||||||||||||| Sbjct: 571 tgctgggcgttctcggcggtggcggc 596
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 544 tgctgggcgttcgcggcggtggcggc 569 |||||||||||| ||||||||||||| Sbjct: 76688 tgctgggcgttctcggcggtggcggc 76713
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgccgccggcgcccccggcgt 142 |||||||||||||||||||||| Sbjct: 131630 ccgccgccggcgcccccggcgt 131609
>ref|XM_735943.1| Plasmodium chabaudi chabaudi Casein kinase II regulatory subunit (PC000453.03.0) partial mRNA Length = 771 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1169 ttgtgataatgcaaaattatta 1190 |||||||||||||||||||||| Sbjct: 459 ttgtgataatgcaaaattatta 480
>ref|XM_001011278.1| Tetrahymena thermophila SB210 Leucine Rich Repeat family protein (TTHERM_00146390) mRNA, complete cds Length = 831 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1259 aataaattttcgactgaatta 1279 ||||||||||||||||||||| Sbjct: 187 aataaattttcgactgaatta 207
>gb|AC187523.4| Pan troglodytes BAC clone CH251-493N2 from chromosome 7, complete sequence Length = 168538 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1179 gcaaaattattatttttactatact 1203 |||||||||||||| |||||||||| Sbjct: 149314 gcaaaattattattattactatact 149338
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 650 gcaccggctgcggcggcggccactc 674 ||||||||||||||||| ||||||| Sbjct: 1400495 gcaccggctgcggcggctgccactc 1400471
>gb|AC188558.3| Pan troglodytes BAC clone CH251-481A17 from chromosome 7, complete sequence Length = 203411 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1179 gcaaaattattatttttactatact 1203 |||||||||||||| |||||||||| Sbjct: 120592 gcaaaattattattattactatact 120568
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 tctgggtcgcaggtccacacc 345 ||||||||||||||||||||| Sbjct: 4049929 tctgggtcgcaggtccacacc 4049949
>ref|NM_001052394.1| Oryza sativa (japonica cultivar-group) Os02g0141400 (Os02g0141400) mRNA, complete cds Length = 1535 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ggagtcggaggtgagggagaggttc 177 |||| |||||||||||||||||||| Sbjct: 1157 ggagacggaggtgagggagaggttc 1181
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 gcaccggctgcggcggcggcc 670 ||||||||||||||||||||| Sbjct: 255711 gcaccggctgcggcggcggcc 255691
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 950 accacgccgtcaccatcgtcg 970 ||||||||||||||||||||| Sbjct: 315228 accacgccgtcaccatcgtcg 315208
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 cgcggcggtggcggcgatcga 575 ||||||||||||||||||||| Sbjct: 7078185 cgcggcggtggcggcgatcga 7078205
>gb|AC188109.1| Pongo pygmaeus abelii chromosome UNK clone CH276-68H12, complete sequence Length = 204391 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 aatgcaaaattattatttttactat 1200 ||||||||||||||||| ||||||| Sbjct: 134636 aatgcaaaattattattattactat 134612
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1181 aaaattattatttttactata 1201 ||||||||||||||||||||| Sbjct: 1075896 aaaattattatttttactata 1075876
>gb|AE014826.1| Plasmodium falciparum 3D7 chromosome 14 section 11 of 13 of the complete sequence Length = 250663 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1180 caaaattattatttttactat 1200 ||||||||||||||||||||| Sbjct: 26867 caaaattattatttttactat 26887 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1182 aaattattatttttactatactttc 1206 |||||||||||||||||||| |||| Sbjct: 147910 aaattattatttttactatattttc 147934
>gb|AC099571.3| Homo sapiens chromosome 1 clone RP11-438H8, complete sequence Length = 167231 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 aatgcaaaattattatttttactat 1200 ||||||||||||||||| ||||||| Sbjct: 100299 aatgcaaaattattattattactat 100323
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 799 aagggcttcaaggccgtgccg 819 ||||||||||||||||||||| Sbjct: 1775653 aagggcttcaaggccgtgccg 1775673
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1181 aaaattattatttttactata 1201 ||||||||||||||||||||| Sbjct: 626461 aaaattattatttttactata 626441
>gb|AE005808.1| Caulobacter crescentus CB15 section 134 of 359 of the complete genome Length = 12761 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 gttcgcggcggtggcggcgat 572 ||||||||||||||||||||| Sbjct: 7676 gttcgcggcggtggcggcgat 7696
>emb|AL356608.23| Human DNA sequence from clone RP11-724N1 on chromosome 10 Contains the 5' end of the CNNM2 gene for cyclin M2 and a CpG island, complete sequence Length = 161053 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1181 aaaattattatttttactatacttt 1205 |||||||||||| |||||||||||| Sbjct: 54295 aaaattattattattactatacttt 54271
>ref|XM_649516.1| Entamoeba histolytica HM-1:IMSS NOL1/NOP2/sun family protein (49.t00021) partial mRNA Length = 1536 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1199 atactttcctttaatttgatc 1219 ||||||||||||||||||||| Sbjct: 543 atactttcctttaatttgatc 523
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 ccggctgcggcggcggccact 673 ||||||||||||||||||||| Sbjct: 845850 ccggctgcggcggcggccact 845870
>gb|AC009144.5|AC009144 Homo sapiens chromosome 16 clone RP11-551E2, complete sequence Length = 173758 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1181 aaaattattatttttactatacttt 1205 |||||||||||| |||||||||||| Sbjct: 168082 aaaattattattattactatacttt 168058
>gb|AC083873.3|AC083873 Homo sapiens chromosome 7 clone RP11-372E15, complete sequence Length = 161635 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1179 gcaaaattattatttttactatact 1203 |||||||||||||| |||||||||| Sbjct: 78943 gcaaaattattattattactatact 78967
>gb|AC099570.2| Homo sapiens chromosome 1 clone RP11-430I15, complete sequence Length = 199825 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 aatgcaaaattattatttttactat 1200 ||||||||||||||||| ||||||| Sbjct: 18885 aatgcaaaattattattattactat 18909
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ggagtcggaggtgagggagaggttc 177 |||| |||||||||||||||||||| Sbjct: 28393 ggagacggaggtgagggagaggttc 28369
>dbj|AK106374.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D01, full insert sequence Length = 1535 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ggagtcggaggtgagggagaggttc 177 |||| |||||||||||||||||||| Sbjct: 1157 ggagacggaggtgagggagaggttc 1181
>gb|DQ147251.1| Zea diploperennis isolate d6 cysteine protease Mir1 gene, partial cds Length = 1029 Score = 42.1 bits (21), Expect = 4.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 543 gtgctgggcgttcgcggcggtggcggcgatcga 575 ||||||||||||| ||||||| ||||| ||||| Sbjct: 534 gtgctgggcgttctcggcggttgcggccatcga 566 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 192,020,749 Number of extensions: 11167402 Number of successful extensions: 269265 Number of sequences better than 10.0: 162 Number of HSP's gapped: 269217 Number of HSP's successfully gapped: 272 Length of query: 1294 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1271 Effective length of database: 18,503,978,556 Effective search space: 23518556744676 Effective search space used: 23518556744676 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
