| Clone Name | FLbaf109l16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243157.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100033K03, full insert sequence Length = 2324 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| ||| Sbjct: 1516 cacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgct 1575 Query: 1618 ga 1619 || Sbjct: 1576 ga 1577 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 1354 ctcttccttgtatatgaattg 1374
>ref|NM_001058610.1| Oryza sativa (japonica cultivar-group) Os04g0125700 (Os04g0125700) mRNA, complete cds Length = 2292 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| ||| Sbjct: 1489 cacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgct 1548 Query: 1618 ga 1619 || Sbjct: 1549 ga 1550 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 1327 ctcttccttgtatatgaattg 1347
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| ||| Sbjct: 1550143 cacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgct 1550084 Query: 1618 ga 1619 || Sbjct: 1550083 ga 1550082 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| ||||| | ||||||||| ||||||| || Sbjct: 2816797 cacagaaatatcaaaccaaacaacatactcctggacaaagagttcaacgccaagctagca 2816856 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 2816857 gacttcgggct 2816867 Score = 75.8 bits (38), Expect = 6e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 |||| ||||||||||||||||||| || ||||||||| ||||| | || |||||| |||| Sbjct: 1523364 catcctgcacagagatatcaaacccagtaacatactcctggacaaagaattcaacgccaa 1523423 Query: 1611 gcttgctgacttcgggct 1628 ||| || ||||||||||| Sbjct: 1523424 gctagcagacttcgggct 1523441 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Minus Query: 1559 acagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgctg 1618 ||||||||||||||||| |||||||| ||||||| ||| | |||||| |||||||||||| Sbjct: 3095617 acagagatatcaaaccaggcaacatagtcttggatgacaatttcaacaccaagcttgctg 3095558 Query: 1619 a 1619 | Sbjct: 3095557 a 3095557 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| | ||| | ||||||||| ||||||| || Sbjct: 3229412 cacagaaatatcaaaccaaacaacatactcctagacaaagagttcaacgccaagctagca 3229471 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 3229472 gacttcgggct 3229482 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Plus Query: 809 ccttgctaccgccggaggtggcggtggggttttctgcggccactggtacatctttccagc 868 ||||||| || |||||||||||||||||||||||| | |||| || || | ||| ||| Sbjct: 3138597 ccttgctcccaccggaggtggcggtggggttttctacatccaccgggtcagccttcgagc 3138656 Query: 869 tccatcagatattgtcttggtccttcaactc 899 ||||||||||| | || ||||| |||||||| Sbjct: 3138657 tccatcagatactatcatggtctttcaactc 3138687 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 866 agctccatcagatattgtcttggtccttcaactcaac 902 |||||||||||||| |||| ||||||||||||||||| Sbjct: 1438759 agctccatcagataatgtcatggtccttcaactcaac 1438723 Score = 56.0 bits (28), Expect = 6e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggac 1593 ||||| ||||||||||| |||||||||||||||||| Sbjct: 2798037 cacagggatatcaaaccgagcaacatactcttggac 2798072 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 164 cacccttctccttcagcttcgacttctccaccatatcca 202 ||||||||||||||| |||||||||||||| ||| |||| Sbjct: 2796069 cacccttctccttcaacttcgacttctccaacatgtcca 2796107 Score = 52.0 bits (26), Expect = 0.009 Identities = 68/82 (82%) Strand = Plus / Plus Query: 818 cgccggaggtggcggtggggttttctgcggccactggtacatctttccagctccatcaga 877 |||||||||||||||| || |||||||| ||||| || | | | || |||| ||||||| Sbjct: 1516774 cgccggaggtggcggttggattttctgcagccaccggcagagccgtcgagctgcatcaga 1516833 Query: 878 tattgtcttggtccttcaactc 899 || |||| ||||| |||||||| Sbjct: 1516834 tactgtcatggtctttcaactc 1516855 Score = 52.0 bits (26), Expect = 0.009 Identities = 77/94 (81%) Strand = Plus / Plus Query: 809 ccttgctaccgccggaggtggcggtggggttttctgcggccactggtacatctttccagc 868 ||||||| ||| |||||||||| ||||| |||||||| ||||| || || | ||| ||| Sbjct: 2796720 ccttgctcccgtcggaggtggcagtgggattttctgcagccaccggggcagccttcgagc 2796779 Query: 869 tccatcagatattgtcttggtccttcaactcaac 902 ||||||| ||| || ||||| ||||||||||| Sbjct: 2796780 tccatcaaatacactcatggtctttcaactcaac 2796813 Score = 50.1 bits (25), Expect = 0.036 Identities = 34/37 (91%) Strand = Plus / Minus Query: 866 agctccatcagatattgtcttggtccttcaactcaac 902 ||||||||||||| |||| ||||||||||||||||| Sbjct: 2242979 agctccatcagattatgtcatggtccttcaactcaac 2242943 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 2813513 ggcatggccttcttcctctccagctaccc 2813541 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 3226124 ggcatggccttcttcctctccagctaccc 3226152 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggac 1593 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 3209922 cacagggatatcaaaccgagcaacatactcctggac 3209957 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttgga 1592 |||||||| |||||| ||||||||||||| ||||| Sbjct: 30233617 cacagagacatcaaatcaagcaacatacttttgga 30233651 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 tccttcagcttcgacttctccaccatatcc 201 |||||||||||| ||||||||| ||||||| Sbjct: 1439447 tccttcagcttcaacttctccaacatatcc 1439418 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 tccttcagcttcgacttctccaccatatcc 201 |||||||||||| ||||||||| ||||||| Sbjct: 2243635 tccttcagcttcaacttctccaacatatcc 2243606 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 1553454 ctcttccttgtatatgaattg 1553434 Score = 42.1 bits (21), Expect = 8.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 435 tggcatggctttcttcctctccagctacccttc 467 ||||||||||||||||||| |||| | |||||| Sbjct: 2745522 tggcatggctttcttcctcgccagtttcccttc 2745490 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 3098173 ctcttccttgtatatgaattg 3098153
>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22, complete sequence Length = 152676 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| ||| Sbjct: 70309 cacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgct 70250 Query: 1618 ga 1619 || Sbjct: 70249 ga 70248 Score = 75.8 bits (38), Expect = 6e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 |||| ||||||||||||||||||| || ||||||||| ||||| | || |||||| |||| Sbjct: 43530 catcctgcacagagatatcaaacccagtaacatactcctggacaaagaattcaacgccaa 43589 Query: 1611 gcttgctgacttcgggct 1628 ||| || ||||||||||| Sbjct: 43590 gctagcagacttcgggct 43607 Score = 52.0 bits (26), Expect = 0.009 Identities = 68/82 (82%) Strand = Plus / Plus Query: 818 cgccggaggtggcggtggggttttctgcggccactggtacatctttccagctccatcaga 877 |||||||||||||||| || |||||||| ||||| || | | | || |||| ||||||| Sbjct: 36940 cgccggaggtggcggttggattttctgcagccaccggcagagccgtcgagctgcatcaga 36999 Query: 878 tattgtcttggtccttcaactc 899 || |||| ||||| |||||||| Sbjct: 37000 tactgtcatggtctttcaactc 37021 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 73620 ctcttccttgtatatgaattg 73600
>dbj|AK073177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004M16, full insert sequence Length = 2293 Score = 83.8 bits (42), Expect = 3e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| ||| Sbjct: 1490 cacagagatatcaaaccaggcaacgtactcttggacgacgatttcaacgccaagctcgct 1549 Query: 1618 ga 1619 || Sbjct: 1550 ga 1551 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 1328 ctcttccttgtatatgaattg 1348
>emb|CR855031.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140L04, complete sequence Length = 88891 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| ||||| | ||||||||| ||||||| || Sbjct: 37199 cacagaaatatcaaaccaaacaacatactcctggacaaagagttcaacgccaagctagca 37258 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 37259 gacttcgggct 37269 Score = 56.0 bits (28), Expect = 6e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggac 1593 ||||| ||||||||||| |||||||||||||||||| Sbjct: 23588 cacagggatatcaaaccgagcaacatactcttggac 23623 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 164 cacccttctccttcagcttcgacttctccaccatatcca 202 ||||||||||||||| |||||||||||||| ||| |||| Sbjct: 21620 cacccttctccttcaacttcgacttctccaacatgtcca 21658 Score = 52.0 bits (26), Expect = 0.009 Identities = 77/94 (81%) Strand = Plus / Plus Query: 809 ccttgctaccgccggaggtggcggtggggttttctgcggccactggtacatctttccagc 868 ||||||| ||| |||||||||| ||||| |||||||| ||||| || || | ||| ||| Sbjct: 22271 ccttgctcccgtcggaggtggcagtgggattttctgcagccaccggggcagccttcgagc 22330 Query: 869 tccatcagatattgtcttggtccttcaactcaac 902 ||||||| ||| || ||||| ||||||||||| Sbjct: 22331 tccatcaaatacactcatggtctttcaactcaac 22364 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 33930 ggcatggccttcttcctctccagctaccc 33958 Score = 42.1 bits (21), Expect = 8.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 435 tggcatggctttcttcctctccagctacccttc 467 ||||||||||||||||||| |||| | |||||| Sbjct: 2813 tggcatggctttcttcctcgccagtttcccttc 2781
>ref|NM_001058643.1| Oryza sativa (japonica cultivar-group) Os04g0141400 (Os04g0141400) mRNA, complete cds Length = 2147 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| ||||| | ||||||||| ||||||| || Sbjct: 1537 cacagaaatatcaaaccaaacaacatactcctggacaaagagttcaacgccaagctagca 1596 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 1597 gacttcgggct 1607 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 433 ggcatggccttcttcctctccagctaccc 461
>dbj|AK102268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088O08, full insert sequence Length = 2150 Score = 77.8 bits (39), Expect = 2e-10 Identities = 63/71 (88%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| ||||| | ||||||||| ||||||| || Sbjct: 1539 cacagaaatatcaaaccaaacaacatactcctggacaaagagttcaacgccaagctagca 1598 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 1599 gacttcgggct 1609 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 435 ggcatggccttcttcctctccagctaccc 463
>emb|AL662951.3|OSJN00154 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011E07, complete sequence Length = 165094 Score = 73.8 bits (37), Expect = 3e-09 Identities = 55/61 (90%) Strand = Plus / Minus Query: 1559 acagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgctg 1618 ||||||||||||||||| |||||||| ||||||| ||| | |||||| |||||||||||| Sbjct: 156692 acagagatatcaaaccaggcaacatagtcttggatgacaatttcaacaccaagcttgctg 156633 Query: 1619 a 1619 | Sbjct: 156632 a 156632 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 159248 ctcttccttgtatatgaattg 159228
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttgct 1617 |||||| |||||||||||| |||||||||| | ||| | ||||||||| ||||||| || Sbjct: 133851 cacagaaatatcaaaccaaacaacatactcctagacaaagagttcaacgccaagctagca 133910 Query: 1618 gacttcgggct 1628 ||||||||||| Sbjct: 133911 gacttcgggct 133921 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1559 acagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagctt 1614 ||||||||||||||||| |||||||| ||||||| ||| | |||||| |||||||| Sbjct: 56 acagagatatcaaaccaggcaacatagtcttggatgacaatttcaacaccaagctt 1 Score = 61.9 bits (31), Expect = 1e-05 Identities = 76/91 (83%) Strand = Plus / Plus Query: 809 ccttgctaccgccggaggtggcggtggggttttctgcggccactggtacatctttccagc 868 ||||||| || |||||||||||||||||||||||| | |||| || || | ||| ||| Sbjct: 43036 ccttgctcccaccggaggtggcggtggggttttctacatccaccgggtcagccttcgagc 43095 Query: 869 tccatcagatattgtcttggtccttcaactc 899 ||||||||||| | || ||||| |||||||| Sbjct: 43096 tccatcagatactatcatggtctttcaactc 43126 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 436 ggcatggctttcttcctctccagctaccc 464 |||||||| |||||||||||||||||||| Sbjct: 130563 ggcatggccttcttcctctccagctaccc 130591 Score = 48.1 bits (24), Expect = 0.14 Identities = 33/36 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggac 1593 ||||| ||||||||||| |||||||||||| ||||| Sbjct: 114361 cacagggatatcaaaccgagcaacatactcctggac 114396 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 ctcttccttgtatatgaattg 1431 ||||||||||||||||||||| Sbjct: 2612 ctcttccttgtatatgaattg 2592
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 67.9 bits (34), Expect = 2e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 ||||||||| ||||||||||| ||| |||||||||| ||||| || | ||||| |||| Sbjct: 1799078 catcttgcatagagatatcaagccagacaacatactcctggacaacaacttcaatgccaa 1799137 Query: 1611 gcttgctgacttcgggct 1628 ||||||||| |||||||| Sbjct: 1799138 gcttgctgatttcgggct 1799155 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 acggcacagaccagttcatcgccgtagagttcgac 570 |||||||||||| |||||||||||| ||||||||| Sbjct: 1771711 acggcacagaccggttcatcgccgtcgagttcgac 1771745 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 170 tctccttcagcttcgacttctcca 193 |||||||||||||||||||||||| Sbjct: 1771339 tctccttcagcttcgacttctcca 1771362 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 866 agctccatcagatattgtcttggtccttcaactc 899 |||||||||||||| | || |||||||||||||| Sbjct: 1772038 agctccatcagatactttcatggtccttcaactc 1772071
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 67.9 bits (34), Expect = 2e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 ||||||||| ||||||||||| ||| |||||||||| ||||| || | ||||| |||| Sbjct: 17531 catcttgcatagagatatcaagccagacaacatactcctggacaacaacttcaatgccaa 17590 Query: 1611 gcttgctgacttcgggct 1628 ||||||||| |||||||| Sbjct: 17591 gcttgctgatttcgggct 17608
>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04, complete sequence Length = 133121 Score = 67.9 bits (34), Expect = 2e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 ||||||||| ||||||||||| ||| |||||||||| ||||| || | ||||| |||| Sbjct: 50652 catcttgcatagagatatcaagccagacaacatactcctggacaacaacttcaatgccaa 50711 Query: 1611 gcttgctgacttcgggct 1628 ||||||||| |||||||| Sbjct: 50712 gcttgctgatttcgggct 50729 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 acggcacagaccagttcatcgccgtagagttcgac 570 |||||||||||| |||||||||||| ||||||||| Sbjct: 23285 acggcacagaccggttcatcgccgtcgagttcgac 23319 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 170 tctccttcagcttcgacttctcca 193 |||||||||||||||||||||||| Sbjct: 22913 tctccttcagcttcgacttctcca 22936 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 866 agctccatcagatattgtcttggtccttcaactc 899 |||||||||||||| | || |||||||||||||| Sbjct: 23612 agctccatcagatactttcatggtccttcaactc 23645
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 67.9 bits (34), Expect = 2e-07 Identities = 67/78 (85%) Strand = Plus / Plus Query: 1551 catcttgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaa 1610 ||||||||| ||||||||||| ||| |||||||||| ||||| || | ||||| |||| Sbjct: 1799078 catcttgcatagagatatcaagccagacaacatactcctggacaacaacttcaatgccaa 1799137 Query: 1611 gcttgctgacttcgggct 1628 ||||||||| |||||||| Sbjct: 1799138 gcttgctgatttcgggct 1799155 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 536 acggcacagaccagttcatcgccgtagagttcgac 570 |||||||||||| |||||||||||| ||||||||| Sbjct: 1771711 acggcacagaccggttcatcgccgtcgagttcgac 1771745 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 170 tctccttcagcttcgacttctcca 193 |||||||||||||||||||||||| Sbjct: 1771339 tctccttcagcttcgacttctcca 1771362 Score = 44.1 bits (22), Expect = 2.2 Identities = 31/34 (91%) Strand = Plus / Plus Query: 866 agctccatcagatattgtcttggtccttcaactc 899 |||||||||||||| | || |||||||||||||| Sbjct: 1772038 agctccatcagatactttcatggtccttcaactc 1772071
>gb|AC189298.1| Brassica rapa subsp. pekinensis clone KBrB028I01, complete sequence Length = 133068 Score = 65.9 bits (33), Expect = 6e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 90165 tcttgcacagagacatcaaaccgagcaacatactcttggac 90125
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 1556 tgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttg 1615 |||| ||||| ||||||||||| ||||||||| ||||||| | || ||| ||||||||| Sbjct: 15003028 tgcatagagacatcaaaccaagtaacatactcctggacgaaggtttgaacgccaagcttg 15003087 Query: 1616 ctgacttcgggct 1628 | ||||||||||| Sbjct: 15003088 ccgacttcgggct 15003100 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1762 accgacgtctacagcttcggaattgtcctactaga 1796 ||||||||||||||||||||| | ||||| ||||| Sbjct: 15003216 accgacgtctacagcttcggactcgtcctcctaga 15003250 Score = 42.1 bits (21), Expect = 8.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1295 atgaactcacgacaattagtgaaacaaggcacaaaaatctagtggagctgataggttggt 1354 ||||||||| || ||||||||| |||||||||| || ||||| |||| |||||||| Sbjct: 15001719 atgaactcaacaccattagtgaagcaaggcacaagaacctagtcaagctagaaggttggt 15001778 Query: 1355 gctgc 1359 ||||| Sbjct: 15001779 gctgc 15001783
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 1556 tgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttg 1615 |||| ||||| ||||||||||| ||||||||| ||||||| | || ||| ||||||||| Sbjct: 8932 tgcatagagacatcaaaccaagtaacatactcctggacgaaggtttgaacgccaagcttg 8991 Query: 1616 ctgacttcgggct 1628 | ||||||||||| Sbjct: 8992 ccgacttcgggct 9004 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1762 accgacgtctacagcttcggaattgtcctactaga 1796 ||||||||||||||||||||| | ||||| ||||| Sbjct: 9120 accgacgtctacagcttcggactcgtcctcctaga 9154 Score = 42.1 bits (21), Expect = 8.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1295 atgaactcacgacaattagtgaaacaaggcacaaaaatctagtggagctgataggttggt 1354 ||||||||| || ||||||||| |||||||||| || ||||| |||| |||||||| Sbjct: 7623 atgaactcaacaccattagtgaagcaaggcacaagaacctagtcaagctagaaggttggt 7682 Query: 1355 gctgc 1359 ||||| Sbjct: 7683 gctgc 7687
>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1157F01 Length = 181639 Score = 65.9 bits (33), Expect = 6e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 1556 tgcacagagatatcaaaccaagcaacatactcttggacgacgagttcaaccccaagcttg 1615 |||| ||||| ||||||||||| ||||||||| ||||||| | || ||| ||||||||| Sbjct: 143198 tgcatagagacatcaaaccaagtaacatactcctggacgaaggtttgaacgccaagcttg 143257 Query: 1616 ctgacttcgggct 1628 | ||||||||||| Sbjct: 143258 ccgacttcgggct 143270 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1762 accgacgtctacagcttcggaattgtcctactaga 1796 ||||||||||||||||||||| | ||||| ||||| Sbjct: 143386 accgacgtctacagcttcggactcgtcctcctaga 143420 Score = 42.1 bits (21), Expect = 8.9 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1295 atgaactcacgacaattagtgaaacaaggcacaaaaatctagtggagctgataggttggt 1354 ||||||||| || ||||||||| |||||||||| || ||||| |||| |||||||| Sbjct: 141889 atgaactcaacaccattagtgaagcaaggcacaagaacctagtcaagctagaaggttggt 141948 Query: 1355 gctgc 1359 ||||| Sbjct: 141949 gctgc 141953
>ref|NM_105594.2| Arabidopsis thaliana RPK1 (RECEPTOR-LIKE PROTEIN KINASE 1); kinase (RPK1) mRNA, complete cds Length = 2380 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1345 tcttgcatagagatatcaaaccgagtaacatactcttggac 1385
>gb|BT008896.1| Arabidopsis thaliana At1g69270 mRNA, complete cds Length = 1623 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1142 tcttgcatagagatatcaaaccgagtaacatactcttggac 1182
>gb|AY099858.1| Arabidopsis thaliana receptor protein kinase, putative (At1g69270) mRNA, complete cds Length = 2010 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1345 tcttgcatagagatatcaaaccgagtaacatactcttggac 1385
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 866 agctccatcagatattgtcttggtccttcaactcaac 902 |||||||||||||| |||| ||||||||||||||||| Sbjct: 97783 agctccatcagataatgtcatggtccttcaactcaac 97747 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 tccttcagcttcgacttctccaccatatcc 201 |||||||||||| ||||||||| ||||||| Sbjct: 98471 tccttcagcttcaacttctccaacatatcc 98442
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete sequence Length = 93802 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 55550 tcttgcatagagatatcaaaccgagtaacatactcttggac 55590
>gb|AC008262.4|AC008262 Genomic sequence for Arabidopsis thaliana BAC F4N2 from chromosome I, complete sequence Length = 99698 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 93213 tcttgcatagagatatcaaaccgagtaacatactcttggac 93173
>emb|BX816981.1|CNS0ADDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1822 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1190 tcttgcatagagatatcaaaccgagtaacatactcttggac 1230
>emb|BX817264.1|CNS0AD8E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH9ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1827 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1190 tcttgcatagagatatcaaaccgagtaacatactcttggac 1230
>gb|U55875.1|ATU55875 Arabidopsis thaliana protein kinase (RPK1) mRNA, complete cds Length = 1952 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1553 tcttgcacagagatatcaaaccaagcaacatactcttggac 1593 ||||||| |||||||||||||| || ||||||||||||||| Sbjct: 1284 tcttgcatagagatatcaaaccgagtaacatactcttggac 1324
>ref|NM_001058642.1| Oryza sativa (japonica cultivar-group) Os04g0141200 (Os04g0141200) mRNA, complete cds Length = 1929 Score = 56.0 bits (28), Expect = 6e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggac 1593 ||||| ||||||||||| |||||||||||||||||| Sbjct: 1450 cacagggatatcaaaccgagcaacatactcttggac 1485 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 164 cacccttctccttcagcttcgacttctccaccatatcca 202 ||||||||||||||| |||||||||||||| ||| |||| Sbjct: 95 cacccttctccttcaacttcgacttctccaacatgtcca 133 Score = 52.0 bits (26), Expect = 0.009 Identities = 77/94 (81%) Strand = Plus / Plus Query: 809 ccttgctaccgccggaggtggcggtggggttttctgcggccactggtacatctttccagc 868 ||||||| ||| |||||||||| ||||| |||||||| ||||| || || | ||| ||| Sbjct: 746 ccttgctcccgtcggaggtggcagtgggattttctgcagccaccggggcagccttcgagc 805 Query: 869 tccatcagatattgtcttggtccttcaactcaac 902 ||||||| ||| || ||||| ||||||||||| Sbjct: 806 tccatcaaatacactcatggtctttcaactcaac 839
>emb|BX815714.1|CNS0ACV5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZC07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1838 Score = 50.1 bits (25), Expect = 0.036 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1561 agagatatcaaaccaagcaacatactcttggac 1593 |||||||||||||| || ||||||||||||||| Sbjct: 1184 agagatatcaaaccgagtaacatactcttggac 1216
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 50.1 bits (25), Expect = 0.036 Identities = 34/37 (91%) Strand = Plus / Minus Query: 866 agctccatcagatattgtcttggtccttcaactcaac 902 ||||||||||||| |||| ||||||||||||||||| Sbjct: 67986 agctccatcagattatgtcatggtccttcaactcaac 67950 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 172 tccttcagcttcgacttctccaccatatcc 201 |||||||||||| ||||||||| ||||||| Sbjct: 68642 tccttcagcttcaacttctccaacatatcc 68613
>ref|NM_001060279.1| Oryza sativa (japonica cultivar-group) Os04g0598500 (Os04g0598500) mRNA, complete cds Length = 4710 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1558 cacagagatatcaaaccaagcaacatactcttgga 1592 |||||||| |||||| ||||||||||||| ||||| Sbjct: 1085 cacagagacatcaaatcaagcaacatacttttgga 1051
>ref|NM_001060278.1| Oryza sativa (japonica cultivar-group) Os04g0598600 (Os04g0598600) mRNA, complete cds Length = 2334 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttgga 1592 |||||||| |||||| ||||||||||||| ||||| Sbjct: 1699 cacagagacatcaaatcaagcaacatacttttgga 1733
>gb|AC189569.1| Brassica rapa subsp. pekinensis clone KBrH009I12, complete sequence Length = 131398 Score = 46.1 bits (23), Expect = 0.57 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1763 ccgacgtctacagcttcggaattgtcctact 1793 ||||| ||||||||||||| ||||||||||| Sbjct: 130822 ccgacatctacagcttcggcattgtcctact 130792
>gb|AC189373.1| Brassica rapa subsp. pekinensis clone KBrB048F07, complete sequence Length = 161856 Score = 46.1 bits (23), Expect = 0.57 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1763 ccgacgtctacagcttcggaattgtcctact 1793 ||||| ||||||||||||| ||||||||||| Sbjct: 223 ccgacatctacagcttcggcattgtcctact 193
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1550 gcatcttgcacagagatatcaaaccaagcaacata 1584 ||||||||||||| ||| |||||||||| |||||| Sbjct: 74478 gcatcttgcacagggatgtcaaaccaagtaacata 74444
>dbj|AK111909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079C23, full insert sequence Length = 4712 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1558 cacagagatatcaaaccaagcaacatactcttgga 1592 |||||||| |||||| ||||||||||||| ||||| Sbjct: 1086 cacagagacatcaaatcaagcaacatacttttgga 1052
>gb|AY776279.1| Mangifera indica putative receptor-like serine/threonine kinase gene, partial cds Length = 552 Score = 46.1 bits (23), Expect = 0.57 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttggacgac 1596 ||||||||||| ||| ||||||||||||| || |||||| Sbjct: 352 cacagagatattaaagcaagcaacatacttttagacgac 390
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 46.1 bits (23), Expect = 0.57 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacatactcttgga 1592 |||||||| |||||| ||||||||||||| ||||| Sbjct: 129911 cacagagacatcaaatcaagcaacatacttttgga 129945
>ref|NM_101527.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT1G16670) mRNA, complete cds Length = 1705 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 754 cacagagatatcaaagcaagcaacat 779
>ref|NM_119009.1| Arabidopsis thaliana kinase (AT4G28670) mRNA, complete cds Length = 1878 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 1354 cacagagatatcaaagcaagcaacat 1379
>ref|NM_115219.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT3G53590) mRNA, complete cds Length = 2352 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1564 gatatcaaaccaagcaacatactcttggac 1593 ||||||||| | |||||||||||||||||| Sbjct: 1696 gatatcaaaaccagcaacatactcttggac 1725
>gb|BT000152.1| Arabidopsis thaliana Unknown protein (At1g16670) mRNA, complete cds Length = 1341 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 499 cacagagatatcaaagcaagcaacat 524
>gb|AY059921.1| Arabidopsis thaliana Unknown protein (F19K19.4) mRNA, complete cds Length = 1693 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 742 cacagagatatcaaagcaagcaacat 767
>emb|AL161573.2|ATCHRIV69 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 69 Length = 197655 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 73973 cacagagatatcaaagcaagcaacat 73998
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 40017 cacagagatatcaaagcaagcaacat 39992
>emb|BX818657.1|CNS0AB8H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1460 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 742 cacagagatatcaaagcaagcaacat 767
>emb|BX818513.1|CNS0AB0V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1024 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1558 cacagagatatcaaaccaagcaacat 1583 ||||||||||||||| |||||||||| Sbjct: 719 cacagagatatcaaagcaagcaacat 744
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 818 cgccggaggtggcggtggggtt 839 |||||||||||||||||||||| Sbjct: 2052947 cgccggaggtggcggtggggtt 2052968
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 44.1 bits (22), Expect = 2.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1564 gatatcaaaccaagcaacatactcttggac 1593 ||||||||| | |||||||||||||||||| Sbjct: 108891 gatatcaaaaccagcaacatactcttggac 108862
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 tcgcgatcgggctcaacgtcg 415 ||||||||||||||||||||| Sbjct: 3332276 tcgcgatcgggctcaacgtcg 3332296
>gb|AC132112.5| Mus musculus BAC clone RP24-207F16 from chromosome 14, complete sequence Length = 155581 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 848 ccactggtacatctttccagctcca 872 |||||| |||||||||||||||||| Sbjct: 135537 ccactgatacatctttccagctcca 135561
>dbj|AK241606.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065184G04, full insert sequence Length = 1492 Score = 42.1 bits (21), Expect = 8.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 435 tggcatggctttcttcctctccagctacccttc 467 ||||||||||||||||||| |||| | |||||| Sbjct: 307 tggcatggctttcttcctcgccagtttcccttc 339
>ref|NM_001058640.1| Oryza sativa (japonica cultivar-group) Os04g0140400 (Os04g0140400) mRNA, complete cds Length = 2301 Score = 42.1 bits (21), Expect = 8.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 435 tggcatggctttcttcctctccagctacccttc 467 ||||||||||||||||||| |||| | |||||| Sbjct: 615 tggcatggctttcttcctcgccagtttcccttc 647
>gb|AC186756.1| Musa acuminata clone MA4_112I10, complete sequence Length = 102441 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 567 cgacgtgttcagcaacacctgggac 591 ||||||||||| ||||||||||||| Sbjct: 86769 cgacgtgttcaacaacacctgggac 86745
>ref|NM_124623.2| Arabidopsis thaliana HCF106 (HCF106) mRNA, complete cds Length = 1131 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1375 ggttattggtgttgttgcttt 1395 ||||||||||||||||||||| Sbjct: 366 ggttattggtgttgttgcttt 386
>ref|NM_119785.3| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase (AT4G36180) mRNA, complete cds Length = 3678 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 3223 tctacagcttcggcattgtcctact 3247
>gb|AC140311.2| Mus musculus BAC clone RP23-392M3 from chromosome 9, complete sequence Length = 195460 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tcacccttctccttcagcttc 183 ||||||||||||||||||||| Sbjct: 48240 tcacccttctccttcagcttc 48260
>gb|AY071795.1| Agabus disintegratus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 758 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1019 ttgtaatatttctgggagtaa 1039 ||||||||||||||||||||| Sbjct: 490 ttgtaatatttctgggagtaa 510
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 ggatggcgtacgctcaccctg 337 ||||||||||||||||||||| Sbjct: 2781486 ggatggcgtacgctcaccctg 2781466
>gb|AY080606.1| Arabidopsis thaliana putative receptor protein kinase (At4g36180) mRNA, partial cds Length = 1343 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 893 tctacagcttcggcattgtcctact 917
>emb|AL445192.3| Human DNA sequence from clone RP11-269H4 on chromosome 20 Contains the 3' end of the gene for P-Rex1 protein (KIAA1415, PREX1), complete sequence Length = 75954 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1236 ggaatgggaagatctggctgt 1256 ||||||||||||||||||||| Sbjct: 58311 ggaatgggaagatctggctgt 58291
>emb|AL356241.8| Human DNA sequence from clone RP11-58K5 on chromosome 13, complete sequence Length = 171068 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1662 caatgagttcatccccacagt 1682 ||||||||||||||||||||| Sbjct: 83833 caatgagttcatccccacagt 83813
>gb|AC158518.2| Mus musculus BAC clone RP24-86K19 from chromosome 9, complete sequence Length = 203656 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2256 attcatcactatattcttttc 2276 ||||||||||||||||||||| Sbjct: 8591 attcatcactatattcttttc 8611
>gb|AC159809.2| Mus musculus BAC clone RP24-216P6 from chromosome 9, complete sequence Length = 160712 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2256 attcatcactatattcttttc 2276 ||||||||||||||||||||| Sbjct: 150253 attcatcactatattcttttc 150273
>gb|AC010601.6| Homo sapiens chromosome 16 clone CTA-481E9, complete sequence Length = 110222 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1234 atggaatgggaagatctggct 1254 ||||||||||||||||||||| Sbjct: 73413 atggaatgggaagatctggct 73433
>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85 Length = 198750 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 1848 tctacagcttcggcattgtcctact 1824
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 192300 tctacagcttcggcattgtcctact 192276
>emb|AL133302.1|SPAPJ691 S.pombe chromosome I PCR product p691 Length = 6161 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2112 ctcttttagttaatcaacctcagct 2136 |||||||||||||| |||||||||| Sbjct: 3192 ctcttttagttaataaacctcagct 3216
>emb|AL022141.1|ATF23E13 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E13 (ESSAII project) Length = 94695 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 25127 tctacagcttcggcattgtcctact 25103
>gb|AC142260.6| Mus musculus BAC clone RP24-508M8 from chromosome 14, complete sequence Length = 148626 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 848 ccactggtacatctttccagctcca 872 |||||| |||||||||||||||||| Sbjct: 5348 ccactgatacatctttccagctcca 5372
>gb|BT005414.1| Arabidopsis thaliana clone U51172 putative HCF106 protein (At5g52440) mRNA, complete cds Length = 814 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1375 ggttattggtgttgttgcttt 1395 ||||||||||||||||||||| Sbjct: 285 ggttattggtgttgttgcttt 305
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 8.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 256 ctggtcgacctcacctacaactccatcac 284 ||||||||||||| |||||||||| |||| Sbjct: 2502987 ctggtcgacctcatctacaactccttcac 2502959
>dbj|AB019226.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24M7 Length = 73999 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1375 ggttattggtgttgttgcttt 1395 ||||||||||||||||||||| Sbjct: 58991 ggttattggtgttgttgcttt 59011
>dbj|AK118733.1| Arabidopsis thaliana At5g52440 mRNA for putative HCF106, complete cds, clone: RAFL21-08-G12 Length = 1059 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1375 ggttattggtgttgttgcttt 1395 ||||||||||||||||||||| Sbjct: 308 ggttattggtgttgttgcttt 328
>ref|XM_948858.1| Theileria annulata strain Ankara hypothetical protein (TA05865) partial mRNA Length = 1122 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1975 atggaggatgcaatgaaatac 1995 ||||||||||||||||||||| Sbjct: 733 atggaggatgcaatgaaatac 753
>emb|BX826731.1|CNS0A4AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 3540 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1769 tctacagcttcggaattgtcctact 1793 ||||||||||||| ||||||||||| Sbjct: 3085 tctacagcttcggcattgtcctact 3109
>gb|AC145614.3| Homo sapiens chromosome UNKNOWN clone RP11-1210E1, complete sequence Length = 188052 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1817 ccagggaggaaatcctgagga 1837 ||||||||||||||||||||| Sbjct: 184562 ccagggaggaaatcctgagga 184582
>gb|AC144898.3| Homo sapiens chromosome UNKNOWN clone RP11-247L13, complete sequence Length = 155112 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1817 ccagggaggaaatcctgagga 1837 ||||||||||||||||||||| Sbjct: 147475 ccagggaggaaatcctgagga 147495
>gb|AY674000.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 4 Length = 2304 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1550 gcatcttgcacagagatatcaaacc 1574 ||||| ||||||||||||||||||| Sbjct: 1574 gcatcgtgcacagagatatcaaacc 1598
>ref|NM_001009691.2| Rattus norvegicus similar to RIKEN cDNA 6330415M09 (predicted) (RGD1308384_predicted), mRNA gb|AY673998.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 2 Length = 3458 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1550 gcatcttgcacagagatatcaaacc 1574 ||||| ||||||||||||||||||| Sbjct: 1654 gcatcgtgcacagagatatcaaacc 1678
>gb|AY673997.1| Rattus norvegicus doublecortin kinase-2 (Dck2) mRNA, complete cds; transcript variant 1 Length = 2317 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1550 gcatcttgcacagagatatcaaacc 1574 ||||| ||||||||||||||||||| Sbjct: 1574 gcatcgtgcacagagatatcaaacc 1598
>gb|AF139188.1|AF139188 Arabidopsis thaliana HCF106 mRNA, complete cds; nuclear gene for chloroplast product Length = 1013 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1375 ggttattggtgttgttgcttt 1395 ||||||||||||||||||||| Sbjct: 285 ggttattggtgttgttgcttt 305
>emb|AJ871338.1| Nyctotherus ovalis partial gene for ubiquitin-protein ligase RSP5 Length = 1210 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1850 gggcgcagtttgtgaagaata 1870 ||||||||||||||||||||| Sbjct: 591 gggcgcagtttgtgaagaata 571 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 396,792,842 Number of extensions: 29231246 Number of successful extensions: 98066 Number of sequences better than 10.0: 84 Number of HSP's gapped: 98064 Number of HSP's successfully gapped: 142 Length of query: 2318 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2295 Effective length of database: 18,503,978,556 Effective search space: 42466630786020 Effective search space used: 42466630786020 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)