>LOC_Os07g08880:12007.t00763:unspliced-genomic SHL1, putative, expressed|
Length = 7920
Score = 273 bits (590), Expect(4) = e-118
Identities = 108/116 (93%), Positives = 116/116 (100%)
Frame = +1 / +3
Query: 172 GDCVLMRSADTSKPPYVAKVESIEAAGSRGTNVRVRVRWYYRPEESIGGRRPFHGSKEVF 351
GDCVLMR++DTSKPPYVA+VE+IEAAGSRGTNVRVRVRWYYRPEES+GGRRPFHG+KEVF
Sbjct: 2484 GDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRVRVRWYYRPEESMGGRRPFHGAKEVF 2663
Query: 352 LSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFDYKSASGSFVPDRIAV 519
LSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRF+YKSA+GSFVPDRIAV
Sbjct: 2664 LSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFEYKSATGSFVPDRIAV 2831
Score = 101 bits (215), Expect(4) = e-118
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1 / +2
Query: 589 FHPSCIGMTIKEAKKREHFFCQSCTDENGKTTENSHEATSQSEEK 723
FHPSCIGMTIK+AKK EHFFCQSCT ENGK ENSHEAT+QSEEK
Sbjct: 6758 FHPSCIGMTIKDAKKLEHFFCQSCTAENGKMAENSHEATAQSEEK 6892
Score = 69.3 bits (145), Expect(4) = e-118
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1 / +3
Query: 520 FCKCEMPYNPDDLMIQCEECSDW 588
FCKCEMPYNPDDLMIQCEECSDW
Sbjct: 5088 FCKCEMPYNPDDLMIQCEECSDW 5156
Score = 59.3 bits (123), Expect(4) = e-118
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1 / +2
Query: 94 PMAKTRPPKRILESYTIKGSDKVIK 168
PMAK+RPPKRILESYTIKGSDKVIK
Sbjct: 119 PMAKSRPPKRILESYTIKGSDKVIK 193
Score = 218 bits (470), Expect(5) = 3e-83
Identities = 101/116 (87%), Positives = 105/116 (90%)
Frame = -2 / -3
Query: 518 TAIRSGTKLPDADL*SKRQKKSSALTESSFV*LRKLWTLHFPSIVSALCTS*WSERNTSF 339
TA+RSGTKLP ADL SKRQKKSSALTESSFV*LRKL TLHFPS+VSALCTS* SERNTS
Sbjct: 2830 TAMRSGTKLPVADLYSKRQKKSSALTESSFV*LRKL*TLHFPSMVSALCTS**SERNTSL 2651
Query: 338 EP*NGRLPPIDSSGR*YHRTRTLTFVPRDPAASMDSTFATYGGFDVSADLISTQSP 171
P*NGRLPP+DSSGR*YHRTRTLTFVPRDPAAS+ ST AT GGFDVS LISTQSP
Sbjct: 2650 AP*NGRLPPMDSSGR*YHRTRTLTFVPRDPAASIASTLAT*GGFDVSDALISTQSP 2483
Score = 60.2 bits (125), Expect(5) = 3e-83
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2 / -3
Query: 590 NQSEHSSHWIIRSSGLYGISHLQN 519
+QSEHSSHWIIRSSGLYGISHLQN
Sbjct: 5158 HQSEHSSHWIIRSSGLYGISHLQN 5087
Score = 53.8 bits (111), Expect(5) = 3e-83
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -3 / -2
Query: 175 PQA**LCRTP*WCRTRVSSWAGAS*PW 95
P A**LCR+P*WCRTR S+WA A+ PW
Sbjct: 200 PHA**LCRSP*WCRTRGSAWAAATSPW 120
Score = 50.1 bits (103), Expect(5) = 3e-83
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -1 / -3
Query: 684 SCLPIFIGTALAEKVFSFLCFFNGHSNTRRMKP 586
S L IF TALAEK+ F C FN HSN RR+KP
Sbjct: 6853 SHLSIFRSTALAEKML*FFCIFNSHSNARRVKP 6755
Score = 24.0 bits (46), Expect(5) = 3e-83
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -2
Query: 752 HLLRLFDST 726
HLLRLFDST
Sbjct: 7478 HLLRLFDST 7452
Score = 182 bits (393), Expect(4) = 1e-73
Identities = 80/118 (67%), Positives = 97/118 (82%)
Frame = +3 / +2
Query: 168 AWGLRANEIS*YIKATICGKS*VHRGSRVSRHKCESTGSMVLSSRRIDWWEATISWFERG 347
+WGL ANE *YIKAT+CGKS* + G RV+RHKCESTG++VLS+R + W+A+ISW +RG
Sbjct: 2480 SWGLCANEGI*YIKATLCGKS*GY*GCRVTRHKCESTGAVVLSARGVHGWKASISWCQRG 2659
Query: 348 IPL*PL*CTEC*HNRGKMQCPQLP*LHKA*FCQCRGLLLPL*LQISIWQFCARPYCCV 521
+PL L* TEC*H+RGK+Q QLP*LHKA*FCQC GLLL L*+QIS + ARP+CCV
Sbjct: 2660 VPLGSL*RTEC*HHRGKVQRSQLP*LHKA*FCQC*GLLLSL*VQISHRKLRARPHCCV 2833
Score = 73.0 bits (153), Expect(4) = 1e-73
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 588 VSSFLYWNDH*RSKETRTLFLPELYR*KWEDN*EFS*SHVTVRRK 722
VS FL+WND+*R K+TR FLPELY KW+D *EFS*S+ +RRK
Sbjct: 6757 VSPFLHWNDY*RCKKTRAFFLPELYCGKWKDG*EFS*SYSAIRRK 6891
Score = 48.3 bits (99), Expect(4) = 1e-73
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3 / +2
Query: 519 VLQV*DAVQS**PYDPM*GMLRLVSS 596
VLQV*DA+QS**PYDPM*GML LVS+
Sbjct: 5087 VLQV*DAIQS**PYDPM*GML*LVSN 5164
Score = 47.3 bits (97), Expect(4) = 1e-73
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 96 HG*DAPAQEDTRVLHHQGVRQSHQAWG 176
HG A AQ D RVLHHQG+RQSHQA G
Sbjct: 121 HGEVAAAQADPRVLHHQGLRQSHQA*G 201
Score = 195 bits (420), Expect(4) = 2e-70
Identities = 80/116 (68%), Positives = 92/116 (79%)
Frame = -1 / -2
Query: 519 HSNTVGHKTARC*FVVKAAEEVLGIDRIKLCVATEAVDIAFSLYCVSTLYIIVVREEYLF 340
HSN VGH+ + *FV+KA EEVL IDRIKLCVATEAV++A SLY VSTLY+IV+REE+LF
Sbjct: 2831 HSNAVGHEASCG*FVLKATEEVLSIDRIKLCVATEAVNVALSLYGVSTLYVIVIREEHLF 2652
Query: 339 RTMKWSPPTNRFFWTIVPSNPYSHICASRPCCLDGLNFCHIWWL*CIS*SH*HAVP 172
TMKW+P T+ W IVP +PYSHICAS PC L+ LN CHI WL*CI H*H VP
Sbjct: 2651 GTMKWTPSTHGLLWPIVPPHPYSHICAS*PCSLNSLNSCHIGWL*CIRCPH*HTVP 2484
Score = 58.8 bits (122), Expect(4) = 2e-70
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -2 / -1
Query: 659 QLWQKKCSRFFASLMVIPIQEG*NQSEHSSHWII 558
QLWQKKCS FFASL+VIP+QEG*N SS +++
Sbjct: 6828 QLWQKKCSSFFASLIVIPMQEG*NLESKSSRYLL 6727
Score = 48.7 bits (100), Expect(4) = 2e-70
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 168 LDDFVGPLDGVGLEYPLGRARLSH 97
LDDFVG LDGVGLE PLGR RL H
Sbjct: 193 LDDFVGALDGVGLEDPLGRPRLRH 122
Score = 38.2 bits (77), Expect(4) = 2e-70
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3 / -2
Query: 721 FLLTVTWLHENSQLSSHFHRYSSGRK 644
FL LHENSQ S HF +YSSGRK
Sbjct: 6890 FLRIAL*LHENSQPSFHFPQYSSGRK 6813
Score = 182 bits (393), Expect(3) = 6e-59
Identities = 81/121 (66%), Positives = 88/121 (72%)
Frame = -3 / -1
Query: 532 HTCKTQQYGRAQNCQMLICSQSGRRSPRH*QNQALCSYGSCGHCIFPLLCQHSVHHSGQR 353
H TQQ GRA++ LIC+QS RRSP+H*QNQALCSYGSC C FPL CQHSV HS R
Sbjct: 2844 H*ILTQQCGRARSFLWLICTQSDRRSPQH*QNQALCSYGSCERCTFPLWCQHSVRHSDPR 2665
Query: 352 GIPLSNHEMVASHQSILLDDSTIEPVLSHLCLETLLPRWTQLLPHMVALMYQLISLARSP 173
G PL +HEM A H L DST PVLSHLCL TL P+ QLLPH VALMYQ+ SLA SP
Sbjct: 2664 GTPLWHHEMDAFHPWTPLADSTTAPVLSHLCLVTLQPQ*PQLLPHRVALMYQMPSLAHSP 2485
Query: 172 Q 170
Q
Sbjct: 2484 Q 2482
Score = 55.6 bits (115), Expect(3) = 6e-59
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -3 / -1
Query: 589 TSRSIPHIGS*GHQDCTASHTCKT 518
T++SIPHIGS*GHQDC ASHTC+T
Sbjct: 5157 TNQSIPHIGS*GHQDCMASHTCRT 5086
Score = 40.9 bits (83), Expect(3) = 6e-59
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2 / -1
Query: 167 LMTLSDPLMV*DSSILLGGRVLAM 96
LMTLS+PLMV*DS I LGGR AM
Sbjct: 192 LMTLSEPLMV*DSRIRLGGRDFAM 121
Score = 163 bits (350), Expect(4) = 1e-56
Identities = 80/117 (68%), Positives = 85/117 (72%)
Frame = +2 / +1
Query: 170 LGTAC**DQLIHQSHHMWQKLSPSRQQGLEAQM*EYGFDGTIVQKNRLVGGDHFMVRKRY 349
LGT C** LIHQSH MWQ+L R QG EAQM*EYG GTI Q++ V G HFMV KR
Sbjct: 2482 LGTVC**GHLIHQSHPMWQELRLLRLQGHEAQM*EYGCGGTIGQRSPWVEGVHFMVPKRC 2661
Query: 350 SSLTTMMYRVLTQ*RENAMSTASVATQSLILSMPRTSSAALTTNQHLAVLCPTVLLC 520
SS TM YRVLT *RE+A TASVATQSLILSM RTSS AL+TNQ CPT LLC
Sbjct: 2662 SSRITMTYRVLTP*RESATFTASVATQSLILSMLRTSSVALSTNQPQEASCPTALLC 2832
Score = 54.2 bits (112), Expect(4) = 1e-56
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +2 / +3
Query: 587 GFILLVLE*PLKKQRNENTFSARAVPMKMGRQLRILMKPRHSQKK 721
GF LL LE* LK Q+N + FSARAV KM R LRILMK + + KK
Sbjct: 6756 GFTLLALE*LLKMQKN*SIFSARAVLRKMERWLRILMKLQRNPKK 6890
Score = 41.8 bits (85), Expect(4) = 1e-56
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 524 ASVRCRTILMTL*SNVRNAPTG 589
ASVRC TILMTL*SNVRNA G
Sbjct: 5092 ASVRCHTILMTL*SNVRNALIG 5157
Score = 35.0 bits (70), Expect(4) = 1e-56
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 122 GYSSPTPSRGPTKSSSL 172
G SSPTPSR PTKSSS+
Sbjct: 147 GSSSPTPSRAPTKSSSV 197
Score = 46.0 bits (94), Expect = 5e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -1 / -2
Query: 588 PVGAFLTLDHKVIRIVRHLTLAK 520
P+ AFLTLDHKVIRIV HLTLA+
Sbjct: 5156 PIRAFLTLDHKVIRIVWHLTLAE 5088
>LOC_Os03g58530:12003.t05108:unspliced-genomic DNA binding protein, putative, expressed|
Length = 5208
Score = 230 bits (496), Expect(4) = 8e-92
Identities = 91/119 (76%), Positives = 104/119 (87%)
Frame = +1 / +1
Query: 163 IKPGDCVLMRSADTSKPPYVAKVESIEAAGSRGTNVRVRVRWYYRPEESIGGRRPFHGSK 342
+ GD VLM + D+SK PYVA+VE IEA G + + V+++VRWYYRPEESIGGRRPFHGSK
Sbjct: 2626 VPAGDTVLMMAPDSSKKPYVARVEEIEATGPQASQVKIKVRWYYRPEESIGGRRPFHGSK 2805
Query: 343 EVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFDYKSASGSFVPDRIAV 519
EVFLSDHYD QSADTIEGKC VH+FR YTKL SV+AEDFFCRF+YKSA+GSFVPDRIAV
Sbjct: 2806 EVFLSDHYDSQSADTIEGKCYVHTFRDYTKLRSVSAEDFFCRFEYKSATGSFVPDRIAV 2982
Score = 78.5 bits (165), Expect(4) = 8e-92
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +1 / +2
Query: 589 FHPSCIGMTIKEAKKREHFFCQSCTDENGKTTENSHEATSQSEEK 723
FHPSC+ +TIKEAKK EHF+C+SC ENGK + S+ AT QSEEK
Sbjct: 4217 FHPSCVEITIKEAKKLEHFYCKSCIAENGKDLQKSNGATVQSEEK 4351
Score = 65.7 bits (137), Expect(4) = 8e-92
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1 / +1
Query: 520 FCKCEMPYNPDDLMIQCEECSDW 588
FCKCEMPYNPD+LMIQCE+CSDW
Sbjct: 3652 FCKCEMPYNPDNLMIQCEDCSDW 3720
Score = 36.8 bits (74), Expect(4) = 8e-92
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / +3
Query: 109 RPPKRILESYTIKGSDKVIKPGD 177
+P KR+LES+TIKG D VIK D
Sbjct: 204 QPQKRVLESFTIKGPDGVIKRED 272
Score = 182 bits (391), Expect(4) = 2e-62
Identities = 84/116 (72%), Positives = 90/116 (77%)
Frame = -2 / -2
Query: 518 TAIRSGTKLPDADL*SKRQKKSSALTESSFV*LRKLWTLHFPSIVSALCTS*WSERNTSF 339
TAIRSGTKLP ADL SKRQKKSSALT+ S V* RK+WT H PS+VSALC S*WSERNTSF
Sbjct: 2981 TAIRSGTKLPVADLYSKRQKKSSALTDRSLV*SRKVWT*HLPSMVSALCES*WSERNTSF 2802
Query: 338 EP*NGRLPPIDSSGR*YHRTRTLTFVPRDPAASMDSTFATYGGFDVSADLISTQSP 171
EP NGR PP+DSSGR*YHRT T P AS+ ST ATYG FD S +IST SP
Sbjct: 2801 EPWNGRRPPMDSSGR*YHRTLIFT*EA*GPVASISSTLATYGFFDESGAIISTVSP 2634
Score = 56.1 bits (116), Expect(4) = 2e-62
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -2 / -2
Query: 590 NQSEHSSHWIIRSSGLYGISHLQNTAIRSGT 498
+QSE SSHWIIR SGLYGISHLQN +S T
Sbjct: 3722 HQSEQSSHWIIRLSGLYGISHLQNLLCQSTT 3630
Score = 42.8 bits (87), Expect(4) = 2e-62
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 659 QLWQKKCSRFFASLMVIPIQEG*NQSEH 576
QL Q KCS FFASLMVI QEG*N E+
Sbjct: 4287 QLLQ*KCSSFFASLMVISTQEG*NLQEN 4204
Score = 30.9 bits (61), Expect(4) = 2e-62
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 168 LDDFVGPLDGVGLEYPLGR 112
LDD VGPLDG L++PL R
Sbjct: 263 LDDPVGPLDGERLQHPLLR 207
Score = 140 bits (301), Expect(4) = 2e-46
Identities = 64/118 (54%), Positives = 77/118 (65%)
Frame = +3 / +3
Query: 168 AWGLRANEIS*YIKATICGKS*VHRGSRVSRHKCESTGSMVLSSRRIDWWEATISWFERG 347
+WG AN+ +* IK TICGK * + G+R S E G++VL RR+ WW A I WFE
Sbjct: 2631 SWGYCANDGT*LIKETICGKG*GN*GNRTSSLSSEDQGAVVLPPRRVHWWPAAIPWFEGS 2810
Query: 348 IPL*PL*CTEC*HNRGKMQCPQLP*LHKA*FCQCRGLLLPL*LQISIWQFCARPYCCV 521
I *PL* EC*H+RG++ CP L LH+A CQ GLLLPL*+QI Q CA PY CV
Sbjct: 2811 ISF*PL*FAEC*HHRGQVLCPHLSRLHQASICQR*GLLLPL*VQICHRQLCA*PYSCV 2984
Score = 43.2 bits (88), Expect(4) = 2e-46
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 519 VLQV*DAVQS**PYDPM*GMLRLV 590
VLQ+*DA+QS**PYDPM*G+L LV
Sbjct: 3651 VLQM*DAIQS**PYDPM*GLL*LV 3722
Score = 42.3 bits (86), Expect(4) = 2e-46
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 581 PTGFILLVLE*PLKKQRNENTFSARAVPMKMGR 679
P GFIL VL+*P KK+RN + F+ +AV +KM R
Sbjct: 4209 PAGFILPVLK*PSKKRRN*SIFTVKAVLLKMER 4307
Score = 31.3 bits (62), Expect(4) = 2e-46
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 108 APAQEDTRVLHHQGVRQSHQAWG 176
A A+ V+HHQG R+ HQA G
Sbjct: 203 AAAEAGAGVVHHQGARRGHQA*G 271
Score = 143 bits (307), Expect(4) = 4e-44
Identities = 63/116 (54%), Positives = 79/116 (68%)
Frame = -1 / -1
Query: 519 HSNTVGHKTARC*FVVKAAEEVLGIDRIKLCVATEAVDIAFSLYCVSTLYIIVVREEYLF 340
HS TV HK A FV+KAA+EVL DR KL V ++ VDI +LY VSTL IIVVR++Y
Sbjct: 2982 HSYTVRHKAACGRFVLKAAKEVLSADRSKLGVISKGVDITLALYGVSTLRIIVVRKKYFL 2803
Query: 339 RTMKWSPPTNRFFWTIVPSNPYSHICASRPCCLDGLNFCHIWWL*CIS*SH*HAVP 172
RTM+W P TN FW +VP + H+ R CCL+ LN CHIW+L* + H*H++P
Sbjct: 2802 RTMEWPPATNGLFWAVVPPHLDLHLRGLRSCCLNFLNPCHIWFL**VRCHH*HSIP 2635
Score = 49.6 bits (102), Expect(4) = 4e-44
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 589 TSRSIPHIGS*GHQDCTASHTCKT 518
TS+S PHIGS*G+QDC ASH CKT
Sbjct: 3721 TSQSNPHIGS*GYQDCMASHICKT 3650
Score = 33.1 bits (66), Expect(4) = 4e-44
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -3 / -2
Query: 673 HFHRYSSGRKXXXXXXXX*WSFQYKKDETSRSI 575
HF +YS K *W FQ++KDET R I
Sbjct: 4301 HFQQYSFYSKNALVSSLL*WLFQHRKDETCRKI 4203
Score = 23.5 bits (45), Expect(4) = 4e-44
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 176 SPGLMTLSDPLMV*DSS 126
S LMT S PLMV DSS
Sbjct: 271 SSRLMTPSGPLMVNDSS 221
Score = 141 bits (303), Expect(2) = 6e-38
Identities = 65/117 (55%), Positives = 79/117 (67%)
Frame = -3 / -3
Query: 520 TQQYGRAQNCQMLICSQSGRRSPRH*QNQALCSYGSCGHCIFPLLCQHSVHHSGQRGIPL 341
TQ YG+AQ+C IC+QSG+RSP+ *Q +A C+ CGH PL CQHS +HSGQ+ I
Sbjct: 2983 TQLYGQAQSCLWQICTQSGKRSPQR*QIEAWCNLERCGHNTCPLWCQHSANHSGQKEILP 2804
Query: 340 SNHEMVASHQSILLDDSTIEPVLSHLCLETLLPRWTQLLPHMVALMYQLISLARSPQ 170
SNH M A HQ LL ST P S LE LLP++ Q LPHMV+LM Q+ SLA+ PQ
Sbjct: 2803 SNHGMAAGHQWTLLGGSTTAP*SSLERLEVLLPQFPQPLPHMVSLMSQVPSLAQYPQ 2633
Score = 42.8 bits (87), Expect(2) = 6e-38
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -1 / -3
Query: 678 LPIFIGTALAEKVFSFLCFFNGHSNTRRMKPVGAFLTLDHKVIRIVR 538
L IF TA K+ FL FF+G+ NT RMKP G + + I +
Sbjct: 4306 LSIFSNTAFTVKML*FLRFFDGYFNTGRMKPAGKYFRTSTRYYEIAK 4166
Score = 115 bits (246), Expect(4) = 3e-36
Identities = 62/117 (52%), Positives = 70/117 (59%)
Frame = +2 / +2
Query: 170 LGTAC**DQLIHQSHHMWQKLSPSRQQGLEAQM*EYGFDGTIVQKNRLVGGDHFMVRKRY 349
LG C** L HQ +HMWQ L RQQ L+ * GT QK+ LV G H MVR++Y
Sbjct: 2633 LGILC**WHLTHQRNHMWQGLRKLRQQDLKPLK*RSRCGGTTAQKSPLVAGGHSMVRRKY 2812
Query: 350 SSLTTMMYRVLTQ*RENAMSTASVATQSLILSMPRTSSAALTTNQHLAVLCPTVLLC 520
LTTM+ RVLT *R + MST T S LS RTS AAL+TN A LC TV LC
Sbjct: 2813 FFLTTMIRRVLTP*RASVMSTPFEITPSFDLSALRTSFAALSTNLPQAALCLTV*LC 2983
Score = 41.4 bits (84), Expect(4) = 3e-36
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / +2
Query: 521 FASVRCRTILMTL*SNVRNAPTGFILL 601
FA+VRC TIL+TL*SNVR A TG I L
Sbjct: 3653 FANVRCHTILITL*SNVRIALTGEIQL 3733
Score = 39.6 bits (80), Expect(4) = 3e-36
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3 / +1
Query: 588 VSSFLYWNDH*RSKETRTLFLPELYR*KWEDN*EFS*SHVTVRRK 722
VSSFL N+H RS+ETR L +LY *KW+ + + + + RK
Sbjct: 4216 VSSFLC*NNHQRSEETRAFLL*KLYC*KWKGSTKVQWCYCAI*RK 4350
Score = 26.7 bits (52), Expect(4) = 3e-36
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 122 GYSSPTPSRGPTKSSSLGT 178
G S +PSRGPT SSS+ T
Sbjct: 217 GCWSRSPSRGPTGSSSVRT 273
Score = 45.1 bits (92), Expect = 0.001
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 594 MKPVGAFLTLDHKVIRIVRHLTLAKHSNTVGHKT 493
+ PV A LTLDHKVIRIV HLT AK ++ +++
Sbjct: 3726 ISPVRAILTLDHKVIRIVWHLTFAKPVMSINNRS 3625
>LOC_Os09g21770:12009.t01911:unspliced-genomic DNA binding protein, putative, expressed|
Length = 3407
Score = 173 bits (373), Expect(5) = 1e-78
Identities = 65/86 (75%), Positives = 78/86 (90%)
Frame = +1 / +3
Query: 265 NVRVRVRWYYRPEESIGGRRPFHGSKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSV 444
+VRVRVRWYYRPEES GGRR FHG+KE+FLSDH+D QSA TIEGKC VHSF++YTKLD+V
Sbjct: 342 SVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDTQSAHTIEGKCVVHSFKNYTKLDNV 521
Query: 445 NAEDFFCRFDYKSASGSFVPDRIAVF 522
EDFFCRF+YK+A+G+F PDR+AV+
Sbjct: 522 GPEDFFCRFEYKAATGAFTPDRVAVY 599
Score = 62.5 bits (130), Expect(5) = 1e-78
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1 / +2
Query: 520 FCKCEMPYNPDDLMIQCEECSDW 588
+CKCEMPYNPDDLM+QCE C DW
Sbjct: 731 YCKCEMPYNPDDLMVQCEGCKDW 799
Score = 59.3 bits (123), Expect(5) = 1e-78
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1 / +2
Query: 589 FHPSCIGMTIKEAKKREHFFCQSCTDENGKTTENSHEATSQSEEKPV 729
FHPSC+GMTI++AKK +HF C C ENG ++ S + + V
Sbjct: 2129 FHPSCMGMTIEQAKKLDHFLCADCVKENGTKRPSNSYPASSNSDSKV 2269
Score = 54.2 bits (112), Expect(5) = 1e-78
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1 / +3
Query: 163 IKPGDCVLMRSADTSKPPYVAKVESIEAAGSRGTNVRVR 279
++ GDCVLMR++DT K PYV +VE +E G VRVR
Sbjct: 246 VEVGDCVLMRASDTEKAPYVGRVERLETDGRGSVRVRVR 362
Score = 35.9 bits (72), Expect(5) = 1e-78
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 97 MAKTRPPKRILESYTIKGSDKVIK 168
MAKT+ K+ +ESYTIKG+ K+++
Sbjct: 91 MAKTKQGKKDVESYTIKGTTKIVR 162
Score = 116 bits (247), Expect(5) = 6e-34
Identities = 56/84 (66%), Positives = 59/84 (70%)
Frame = -2 / -2
Query: 518 TAIRSGTKLPDADL*SKRQKKSSALTESSFV*LRKLWTLHFPSIVSALCTS*WSERNTSF 339
TA RSG K P A L SKRQKKSS T SS V* K WT H PS+V AL S WSERN+S
Sbjct: 595 TATRSGVKAPVAALYSKRQKKSSGPTLSSLV*FLKEWTTHLPSMVWALWVSKWSERNSSL 416
Query: 338 EP*NGRLPPIDSSGR*YHRTRTLT 267
P N LPP+DSSGR*YHRTRT T
Sbjct: 415 APWNCLLPPLDSSGR*YHRTRTRT 344
Score = 35.4 bits (71), Expect(5) = 6e-34
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = -2 / -2
Query: 278 RTLTFVPRDPAASMDSTFATYGGFDVSADLISTQSP 171
RT T P+ S ST TYG F VS ISTQSP
Sbjct: 361 RTRTRTLPLPSVSSLSTLPTYGAFSVSDARISTQSP 254
Score = 32.2 bits (64), Expect(5) = 6e-34
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 672 IFIGTALAEKVFSFLCFFNGHSNTRRMKP 586
IF T A+++ F NGHS+TR M+P
Sbjct: 2212 IFFDTICAQEMI*FFGLLNGHSHTRWMEP 2126
Score = 25.4 bits (49), Expect(5) = 6e-34
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3 / -2
Query: 148 P*WCRTRVSSWAGAS*PW 95
P*WCR R S S PW
Sbjct: 142 P*WCRIRRPSCPAWSWPW 89
Score = 24.0 bits (46), Expect(5) = 6e-34
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3 / -1
Query: 589 TSRSIPHIGS*GHQDCTASHTCKT 518
TS IP H TAS TC T
Sbjct: 800 TSPCIPRTAPLDHPGYTASRTCST 729
Score = 64.3 bits (134), Expect(3) = 4e-11
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = -1 / -1
Query: 519 HSNTVGHKTARC*FVVKAAEEVLGIDRIKLCVATEAVDIAFSLYCVSTLYIIVVREEYLF 340
H + VG + A V++AAEEVLG D ++L V E VD A +L V L + VV EE L
Sbjct: 596 HGDAVGGEGAGGGLVLEAAEEVLGADVVELGVVLEGVDDALALDGVGALGVEVVGEEQLL 417
Query: 339 RTMKWSPPTNRFFWTIVPSNPYSH 268
M+ PP +VP +P+ H
Sbjct: 416 GAMELPPPALGLLRPVVPPHPHPH 345
Score = 27.2 bits (53), Expect(3) = 4e-11
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 647 KKCSRFFASLMVIPIQEG*N 588
+K S F A MVIPIQ+G N
Sbjct: 2187 RK*SNFLACSMVIPIQDGWN 2128
Score = 23.1 bits (44), Expect(3) = 4e-11
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 149 PLMV*DSSILLGGRVLAM 96
PLMV*DS+ L VLAM
Sbjct: 143 PLMV*DSTSFLPCLVLAM 90
Score = 50.6 bits (104), Expect(3) = 9e-11
Identities = 33/84 (39%), Positives = 39/84 (46%)
Frame = +2 / +1
Query: 278 GFDGTIVQKNRLVGGDHFMVRKRYSSLTTMMYRVLTQ*RENAMSTASVATQSLILSMPRT 457
G GT +++ GG M + SS TT R T R +A ST S T S S PRT
Sbjct: 355 GCGGTTGRRSPRAGGGSSMAPRSCSSPTTSTPRAPTPSRASASSTPSRTTPSSTTSAPRT 534
Query: 458 SSAALTTNQHLAVLCPTVLLCFAS 529
SSAA +T A PT C S
Sbjct: 535 SSAASSTRPPPAPSPPTASPCICS 606
Score = 34.5 bits (69), Expect(3) = 9e-11
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 96 HG*DAPAQEDTRVLHHQGVRQSHQAWG 176
HG D QE R+LHHQG Q +G
Sbjct: 90 HGQDQAGQEGRRILHHQGHHQDRPRYG 170
Score = 28.1 bits (55), Expect(3) = 9e-11
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 588 VSSFLYWNDH*RSKETRTLFLPELYR*KWED 680
V S LY NDH* ++ R+ + L + KW +
Sbjct: 2128 VPSILYGNDH*AGQKIRSFPVRRLCQRKWHE 2220
Score = 48.7 bits (100), Expect(2) = 8e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +3 / +2
Query: 279 GSMVLSSRRIDWWEATISWFERGIPL*PL*CTEC*HNRGKMQCPQLP*LHKA*FCQCRGL 458
G++VL + + E + W + +PL PL E H+RG+++ P L LH+A + RGL
Sbjct: 356 GAVVLPAGGVQGREEAVPWRQGAVPLRPLRHPERPHHRGQVRRPLLQELHQARQRRPRGL 535
Query: 459 LLPL*LQ 479
LLPL +Q
Sbjct: 536 LLPLRVQ 556
Score = 26.7 bits (52), Expect(2) = 8e-06
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 128 SSPTPSRGPTKSSSLGTA 181
S+PTPSR P +SS + A
Sbjct: 122 SNPTPSRAPPRSSEVRAA 175
Score = 43.7 bits (89), Expect = 0.003
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 587 QSEHSSHWIIRSSGLYGISHLQNTAIRSGTKLP 489
QS H SH IRSSGLYGISHLQ + T P
Sbjct: 798 QSLHPSHCTIRSSGLYGISHLQYLHTHTHTPKP 700
Score = 40.9 bits (83), Expect = 0.018
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3 / -3
Query: 520 TQQYGRAQNCQMLICSQSGRRSPRH*QNQALCSYGSCGHCIFPLLCQHSVHHSGQRGIPL 341
T++ GR + C++SGRRSPR + +A CS G P C S SG+RG
Sbjct: 597 TRRRGRG*RRRWRPCTRSGRRSPRGRRCRAWCSS*RSGRRTCPRWCGRSGCRSGRRGTAP 418
Query: 340 SNHEMVAS 317
H +S
Sbjct: 417 WRHGTASS 394
>LOC_Os08g32620:12008.t03007:unspliced-genomic DNA binding protein, putative, expressed|
Length = 3429
Score = 175 bits (376), Expect(5) = 2e-76
Identities = 65/86 (75%), Positives = 80/86 (93%)
Frame = +1 / +1
Query: 265 NVRVRVRWYYRPEESIGGRRPFHGSKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSV 444
+VRVRVRWYYRPEES GGRR FHG+KE+FLSDH+D+QSA+TIEGKC VHSF++YTKLD+V
Sbjct: 424 SVRVRVRWYYRPEESKGGRRQFHGAKELFLSDHFDMQSANTIEGKCVVHSFKNYTKLDNV 603
Query: 445 NAEDFFCRFDYKSASGSFVPDRIAVF 522
EDFFCRF+YK+A+G+F PDR+AV+
Sbjct: 604 GPEDFFCRFEYKAATGAFTPDRVAVY 681
Score = 62.9 bits (131), Expect(5) = 2e-76
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +1 / +3
Query: 520 FCKCEMPYNPDDLMIQCEECSDW 588
+CKCEMPYNPDDLM+QC++C DW
Sbjct: 810 YCKCEMPYNPDDLMVQCDDCKDW 878
Score = 55.6 bits (115), Expect(5) = 2e-76
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1 / +1
Query: 589 FHPSCIGMTIKEAKKREHFFCQSCTDENGKTTENSHEATSQSEEKPV 729
FHPSC+ MTI++AKK +HF C C ENG + A S E V
Sbjct: 1957 FHPSCMSMTIEQAKKLDHFVCSDCVKENGAKRPSHAYAGSTKYEPKV 2097
Score = 49.2 bits (101), Expect(5) = 2e-76
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +1 / +1
Query: 172 GDCVLMRSADTSKPPYVAKVESIEAAGSRGTNVRVR 279
GDCVLMR D+ PYVA+VE +E G VRVR
Sbjct: 337 GDCVLMRPVDSDNQPYVARVEKMELDGRGSVRVRVR 444
Score = 35.0 bits (70), Expect(5) = 2e-76
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +1 / +3
Query: 97 MAKTRPPKRILESYTIKGSDKVIK 168
MAKT+ KR ++SYTI G++KV++
Sbjct: 144 MAKTKQGKRDVDSYTISGTNKVVR 215
Score = 118 bits (252), Expect(3) = 7e-34
Identities = 56/84 (66%), Positives = 59/84 (70%)
Frame = -2 / -2
Query: 518 TAIRSGTKLPDADL*SKRQKKSSALTESSFV*LRKLWTLHFPSIVSALCTS*WSERNTSF 339
TA RSG K P A L SKRQKKSS T SS V* K WT H PS+V ALC S WSER +S
Sbjct: 677 TATRSGVKAPVAALYSKRQKKSSGPTLSSLV*FLKEWTTHLPSMVLALCMSKWSERKSSL 498
Query: 338 EP*NGRLPPIDSSGR*YHRTRTLT 267
P N LPP+DSSGR*YHRTRT T
Sbjct: 497 APWNCLLPPLDSSGR*YHRTRTRT 426
Score = 40.0 bits (81), Expect(3) = 7e-34
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -2 / -3
Query: 587 QSEHSSHWIIRSSGLYGISHLQ 522
QS SSH +RSSGLYGISHLQ
Sbjct: 877 QSLQSSHCTMRSSGLYGISHLQ 812
Score = 34.1 bits (68), Expect(3) = 7e-34
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2 / -2
Query: 278 RTLTFVPRDPAASMDSTFATYGGFDVSADLISTQSP 171
RT T P++S+ ST ATYG S ISTQSP
Sbjct: 443 RTRTRTLPRPSSSIFSTRATYGWLSESTGRISTQSP 336
Score = 66.6 bits (139), Expect = 3e-10
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = -1 / -1
Query: 519 HSNTVGHKTARC*FVVKAAEEVLGIDRIKLCVATEAVDIAFSLYCVSTLYIIVVREEYLF 340
H + VG + A V++AAEEVLG D ++L V E VD A +L V L++ VV EE L
Sbjct: 678 HGDAVGGEGAGGGLVLEAAEEVLGADVVELGVVLEGVDDALALDGVGALHVEVVGEEELL 499
Query: 339 RTMKWSPPTNRFFWTIVPSNPYSH 268
M+ PP +VP +P+ H
Sbjct: 498 GAMELPPPALGLLGPVVPPHPHPH 427
Score = 51.9 bits (107), Expect(2) = 3e-06
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +3 / +3
Query: 279 GSMVLSSRRIDWWEATISWFERGIPL*PL*CTEC*HNRGKMQCPQLP*LHKA*FCQCRGL 458
G++VL +R + E + W + +PL PL E H+RG+++ P L LH+A + RGL
Sbjct: 438 GAVVLPARGVQGREEAVPWRQGALPLRPLRHAERQHHRGQVRRPLLQELHQARQRRPRGL 617
Query: 459 LLPL*LQ 479
LLPL +Q
Sbjct: 618 LLPLRVQ 638
Score = 24.9 bits (48), Expect(2) = 3e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 122 GYSSPTPSRGPTKS 163
G S+PTPS PT+S
Sbjct: 169 GTSTPTPSPAPTRS 210
Score = 48.3 bits (99), Expect = 1e-04
Identities = 32/81 (39%), Positives = 37/81 (45%)
Frame = +2 / +2
Query: 278 GFDGTIVQKNRLVGGDHFMVRKRYSSLTTMMYRVLTQ*RENAMSTASVATQSLILSMPRT 457
G GT ++ GG M + SS TT R T R +A ST S T S S PRT
Sbjct: 437 GCGGTTGPRSPRAGGGSSMAPRSSSSPTTSTCRAPTPSRASASSTPSRTTPSSTTSAPRT 616
Query: 458 SSAALTTNQHLAVLCPTVLLC 520
SSAA +T A PT C
Sbjct: 617 SSAASSTRPPPAPSPPTASPC 679
Score = 41.8 bits (85), Expect(2) = 0.008
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = -3 / -3
Query: 520 TQQYGRAQNCQMLICSQSGRRSPRH*QNQALCSYGSCGHCIFPLLCQHSVHHSGQRGIPL 341
T++ GR + C++SGRRSPR + +A CS G P C S SG+RG
Sbjct: 679 TRRRGRG*RRRWRPCTRSGRRSPRGRRCRAWCSS*RSGRRTCPRWCWRSACRSGRRGRAP 500
Query: 340 SNHEMVASHQSILLDDSTIEP 278
H +S ST P
Sbjct: 499 WRHGTASSRPWTPRAGSTTAP 437
Score = 23.1 bits (44), Expect(2) = 0.008
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3 / -1
Query: 553 HQDCTASHTC 524
H C ASHTC
Sbjct: 843 HPGCMASHTC 814
>LOC_Os09g27630:12009.t02441:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
Length = 3341
Score = 29.5 bits (58), Expect(2) = 0.63
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 647 SARAVPMKMGRQLRILMKPRHSQKKSRWS 733
+A +VP+K R LR+L+ P S +RW+
Sbjct: 2621 AAASVPVK*PRALRVLVAPGSSALPARWT 2707
Score = 23.5 bits (45), Expect(2) = 0.63
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3 / +1
Query: 831 VFVADCDSF*CQAC 872
V VADC+ CQ C
Sbjct: 2785 VVVADCEMLFCQQC 2826
>LOC_Os12g07400:12012.t00624:unspliced-genomic hypothetical protein|
Length = 1021
Score = 26.3 bits (51), Expect(2) = 8.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1 / +1
Query: 217 YVAKVESIEAAGSRGTNVRVRVRWYYRPEE 306
Y+ + + AG+ GTN R+ + W + E
Sbjct: 172 YLGRCRDLGWAGNLGTNYRLLISWAFLTSE 261
Score = 26.3 bits (51), Expect(2) = 8.8
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1 / +3
Query: 565 QCEECSDWFHPSCIGMTIKEAKKREHFFCQSCTDENGK 678
Q ++CS W + S G++ +E + + S T G+
Sbjct: 537 QAQDCSSWAYSSTCGLSQREVGQAQDCSSWSITGFGGR 650
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 489,725,456
Number of extensions: 8018534
Number of successful extensions: 32886
Number of sequences better than 10.0: 32
Length of query: 399
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 349
Effective length of database: 52,799,986
Effective search space: 18427195114
Effective search space used: 18427195114
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)