| Clone Name | FLbaf112c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065606.1| Oryza sativa (japonica cultivar-group) Os07g0186400 (Os07g0186400) mRNA, complete cds Length = 1153 Score = 722 bits (364), Expect = 0.0 Identities = 586/660 (88%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 100 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 159 Query: 154 gacaaagtcatcaagcctggggactgcgtgctaatgagatcagctgatacatcaaagcca 213 |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 160 gacaaagtcatcaagcctggggactgtgtgctaatgagggcatctgatacatcaaagcca 219 Query: 214 ccatatgtggcaaaagttgagtccatcgaggcagcagggtctcgaggcacaaatgtgaga 273 || |||||||||| ||||||| | || ||||| |||||||| |||||||||||||||||| Sbjct: 220 ccctatgtggcaagagttgaggctattgaggctgcagggtcacgaggcacaaatgtgaga 279 Query: 274 gtacgggttcgatggtactatcgtccagaagaatcgattggtgggaggcgaccatttcat 333 |||||||| || ||||||||||| ||||| || || || ||||| ||||| ||||||||| Sbjct: 280 gtacgggtgcggtggtactatcggccagaggagtccatgggtggaaggcgtccatttcat 339 Query: 334 ggttcgaaagaggtattcctctctgaccactatgatgtacagagtgctgacacaatagag 393 ||| | |||||||| |||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 340 ggtgccaaagaggtgttcctctcggatcactatgacgtacagagtgctgacaccatagag 399 Query: 394 ggaaaatgcaatgtccacagcttccgtagctacacaaagcttgattctgtcaatgccgag 453 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 400 ggaaagtgcaacgttcacagcttccgtagctacacaaagcttgattctgtcaatgctgag 459 Query: 454 gacttcttctgccgctttgactacaaatcagcatctggcagttttgtgcccgaccgtatt 513 ||||||||||| |||||||| ||||||||||| | || || || ||||||||||| ||| Sbjct: 460 gacttcttctgtcgctttgagtacaaatcagccacaggaagcttcgtgcccgaccgcatt 519 Query: 514 gctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgag 573 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 520 gctgtgttctgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgag 579 Query: 574 gaatgctccgactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaa 633 |||||||| || |||||||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 580 gaatgctctgattggtttcacccttcttgcattggaatgactattaaagatgcaaaaaaa 639 Query: 634 cgagaacactttttctgccagagctgtaccgatgaaaatgggaagacaactgagaattct 693 | ||| || |||||||||||||||||||| | |||||||| |||| ||||||||||| Sbjct: 640 ctagagcattttttctgccagagctgtactgcggaaaatggaaagatggctgagaattct 699 Query: 694 catgaagccacgtcacagtcagaagaaaagccggtggagtcgaaaaggcggagaaggtga 753 |||||||| || | || || |||||||||| ||||||||| ||||| |||||||||||| Sbjct: 700 catgaagctacagcgcaatccgaagaaaagcaggtggagtcaaaaagacggagaaggtga 759
>dbj|AK101850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K07, full insert sequence Length = 1154 Score = 722 bits (364), Expect = 0.0 Identities = 586/660 (88%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 101 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 160 Query: 154 gacaaagtcatcaagcctggggactgcgtgctaatgagatcagctgatacatcaaagcca 213 |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 161 gacaaagtcatcaagcctggggactgtgtgctaatgagggcatctgatacatcaaagcca 220 Query: 214 ccatatgtggcaaaagttgagtccatcgaggcagcagggtctcgaggcacaaatgtgaga 273 || |||||||||| ||||||| | || ||||| |||||||| |||||||||||||||||| Sbjct: 221 ccctatgtggcaagagttgaggctattgaggctgcagggtcacgaggcacaaatgtgaga 280 Query: 274 gtacgggttcgatggtactatcgtccagaagaatcgattggtgggaggcgaccatttcat 333 |||||||| || ||||||||||| ||||| || || || ||||| ||||| ||||||||| Sbjct: 281 gtacgggtgcggtggtactatcggccagaggagtccatgggtggaaggcgtccatttcat 340 Query: 334 ggttcgaaagaggtattcctctctgaccactatgatgtacagagtgctgacacaatagag 393 ||| | |||||||| |||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 341 ggtgccaaagaggtgttcctctcggatcactatgacgtacagagtgctgacaccatagag 400 Query: 394 ggaaaatgcaatgtccacagcttccgtagctacacaaagcttgattctgtcaatgccgag 453 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 401 ggaaagtgcaacgttcacagcttccgtagctacacaaagcttgattctgtcaatgctgag 460 Query: 454 gacttcttctgccgctttgactacaaatcagcatctggcagttttgtgcccgaccgtatt 513 ||||||||||| |||||||| ||||||||||| | || || || ||||||||||| ||| Sbjct: 461 gacttcttctgtcgctttgagtacaaatcagccacaggaagcttcgtgcccgaccgcatt 520 Query: 514 gctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgag 573 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 521 gctgtgttctgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgag 580 Query: 574 gaatgctccgactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaa 633 |||||||| || |||||||| |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 581 gaatgctctgattggtttcacccttcttgtattggaatgactattaaagatgcaaaaaaa 640 Query: 634 cgagaacactttttctgccagagctgtaccgatgaaaatgggaagacaactgagaattct 693 | ||| || |||||||||||||||||||| | |||||||| |||| ||||| ||||| Sbjct: 641 ctagagcattttttctgccagagctgtactgcggaaaatggaaagatggctgaggattct 700 Query: 694 catgaagccacgtcacagtcagaagaaaagccggtggagtcgaaaaggcggagaaggtga 753 |||||||| || | || || |||||||||| ||||||||| ||||| |||||||||||| Sbjct: 701 catgaagctacagcgcaatccgaagaaaagcaggtggagtcaaaaagacggagaaggtga 760
>dbj|AK061201.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A12, full insert sequence Length = 1502 Score = 722 bits (364), Expect = 0.0 Identities = 586/660 (88%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 489 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 548 Query: 154 gacaaagtcatcaagcctggggactgcgtgctaatgagatcagctgatacatcaaagcca 213 |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 549 gacaaagtcatcaagcctggggactgtgtgctaatgagggcatctgatacatcaaagcca 608 Query: 214 ccatatgtggcaaaagttgagtccatcgaggcagcagggtctcgaggcacaaatgtgaga 273 || |||||||||| ||||||| | || ||||| |||||||| |||||||||||||||||| Sbjct: 609 ccctatgtggcaagagttgaggctattgaggctgcagggtcacgaggcacaaatgtgaga 668 Query: 274 gtacgggttcgatggtactatcgtccagaagaatcgattggtgggaggcgaccatttcat 333 |||||||| || ||||||||||| ||||| || || || ||||| ||||| ||||||||| Sbjct: 669 gtacgggtgcggtggtactatcggccagaggagtccatgggtggaaggcgtccatttcat 728 Query: 334 ggttcgaaagaggtattcctctctgaccactatgatgtacagagtgctgacacaatagag 393 ||| | |||||||| |||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 729 ggtgccaaagaggtgttcctctcggatcactatgacgtacagagtgctgacaccatagag 788 Query: 394 ggaaaatgcaatgtccacagcttccgtagctacacaaagcttgattctgtcaatgccgag 453 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 ggaaagtgcaacgttcacagcttccgtagctacacaaagcttgattctgtcaatgctgag 848 Query: 454 gacttcttctgccgctttgactacaaatcagcatctggcagttttgtgcccgaccgtatt 513 ||||||||||| |||||||| ||||||||||| | || || || ||||||||||| ||| Sbjct: 849 gacttcttctgtcgctttgagtacaaatcagccacaggaagcttcgtgcccgaccgcatt 908 Query: 514 gctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgag 573 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 909 gctgtgttctgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgag 968 Query: 574 gaatgctccgactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaa 633 |||||||| || |||||||| |||||||| ||||||||||| |||||||| ||||| ||| Sbjct: 969 gaatgctctgattggtttcacccttcttgcattggaatgactattaaagatgcaaaaaaa 1028 Query: 634 cgagaacactttttctgccagagctgtaccgatgaaaatgggaagacaactgagaattct 693 | ||| || |||||||||||||||||||| | |||||||| |||| ||||||||||| Sbjct: 1029 ctagagcattttttctgccagagctgtactgcggaaaatggaaagatggctgagaattct 1088 Query: 694 catgaagccacgtcacagtcagaagaaaagccggtggagtcgaaaaggcggagaaggtga 753 |||||||| || | || || |||||||||| ||||||||| ||||| |||||||||||| Sbjct: 1089 catgaagctacagcgcaatccgaagaaaagcaggtggagtcaaaaagacggagaaggtga 1148
>gb|AY109297.1| Zea mays PCO127283 mRNA sequence Length = 1233 Score = 599 bits (302), Expect = e-168 Identities = 563/650 (86%) Strand = Plus / Plus Query: 107 cgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtccgacaaagtcatca 166 |||| ||||||||| |||| ||||||||||| ||||||||||| || |||| |||||||| Sbjct: 84 cgcgaccgcccaagcggatcctcgagtcctataccatcaagggttcggacagagtcatca 143 Query: 167 agcctggggactgcgtgctaatgagatcagctgatacatcaaagccaccatatgtggcaa 226 ||||||| || |||||||||||||| || ||||| | ||||||||||| |||||||||| Sbjct: 144 agcctggcgattgcgtgctaatgagggcatctgatgcttcaaagccaccttatgtggcaa 203 Query: 227 aagttgagtccatcgaggcagcagggtctcgaggcacaaatgtgagagtacgggttcgat 286 ||||||| | || || |||||||| ||||||||||| |||||||||||||| || || | Sbjct: 204 gagttgaggcaattgaagcagcaggatctcgaggcaccaatgtgagagtacgagtgcggt 263 Query: 287 ggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagagg 346 |||| ||||| ||||| || || || ||||| |||| |||||||||||||| || |||| Sbjct: 264 ggtattatcgaccagaggagtccataggtggtcggcggccatttcatggttccaaggagg 323 Query: 347 tattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaatg 406 | |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||||| Sbjct: 324 ttttcctctctgaccactatgatgtacaaagtgctgacaccattgaggggaaatgcaatg 383 Query: 407 tccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgcc 466 ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 384 tccacagcttccgtagctatacaaagcttgattctgtcaatgctgaggatttcttctgcc 443 Query: 467 gctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgttttgca 526 |||| || || |||||||| ||||||| ||||| || || ||||| || |||||||||| Sbjct: 444 gcttcgagtataaatcagctactggcagctttgtaccagatcgtatagcagtgttttgca 503 Query: 527 agtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctccgact 586 |||| |||||||| |||||||| |||||||||||||||||||| |||||||| || |||| Sbjct: 504 agtgcgagatgccatacaatccagatgaccttatgatccaatgcgaggaatgttctgact 563 Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaacgagaacactttt 646 ||||||| ||| |||| ||||| ||||| || |||||||||||||||| || || |||| Sbjct: 564 ggtttcaccctgcttgcattgggatgacaatcaaagaagcaaagaaactcgagcattttt 623 Query: 647 tctgccagagctgtaccgatgaaaatgggaagacaactgagaattctcatgaagccacgt 706 ||||||||| |||||| | ||||||||| |||| ||||||||| |||||||| || Sbjct: 624 tctgccagacctgtacagctgaaaatggtaagatggttgagaattcacatgaagctacag 683 Query: 707 cacagtcagaagaaaagccggtggagtcgaaaaggcggagaaggtgatgg 756 | || ||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 684 cgcaatcagaagaaaagccggtggagtcaaaaaggcggcgaaggtgatgg 733
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 379 bits (191), Expect = e-101 Identities = 311/351 (88%) Strand = Plus / Plus Query: 170 ctggggactgcgtgctaatgagatcagctgatacatcaaagccaccatatgtggcaaaag 229 |||||||||| ||||||||||| || ||||||||||||||||||| |||||||||| || Sbjct: 4641312 ctggggactgtgtgctaatgagggcatctgatacatcaaagccaccctatgtggcaagag 4641371 Query: 230 ttgagtccatcgaggcagcagggtctcgaggcacaaatgtgagagtacgggttcgatggt 289 ||||| | || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 4641372 ttgaggctattgaggctgcagggtcacgaggcacaaatgtgagagtacgggtgcggtggt 4641431 Query: 290 actatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagaggtat 349 ||||||| ||||| || || || ||||| ||||| |||||||||||| | |||||||| | Sbjct: 4641432 actatcggccagaggagtccatgggtggaaggcgtccatttcatggtgccaaagaggtgt 4641491 Query: 350 tcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaatgtcc 409 ||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||| || | Sbjct: 4641492 tcctctcggatcactatgacgtacagagtgctgacaccatagagggaaagtgcaacgttc 4641551 Query: 410 acagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgccgct 469 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 4641552 acagcttccgtagctacacaaagcttgattctgtcaatgctgaggacttcttctgtcgct 4641611 Query: 470 ttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgt 520 |||| ||||||||||| | || || || ||||||||||| |||||||||| Sbjct: 4641612 ttgagtacaaatcagccacaggaagcttcgtgcccgaccgcattgctgtgt 4641662 Score = 109 bits (55), Expect = 2e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctc 581 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4643921 tgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgaggaatgctc 4643979 Score = 109 bits (55), Expect = 2e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaacgagaacactttt 646 ||||||| |||||||| ||||||||||| |||||||| ||||| |||| ||| || |||| Sbjct: 4645586 ggtttcacccttcttgcattggaatgactattaaagatgcaaaaaaactagagcattttt 4645645 Query: 647 tctgccagagctgtaccgatgaaaatgggaagacaactgagaattctcatgaagc 701 |||||||||||||||| | |||||||| |||| ||||||||||||||||||| Sbjct: 4645646 tctgccagagctgtactgcggaaaatggaaagatggctgagaattctcatgaagc 4645700 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 4638949 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 4639008 Query: 154 gacaaagtcatcaagc 169 |||||||||||||||| Sbjct: 4639009 gacaaagtcatcaagc 4639024
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 379 bits (191), Expect = e-101 Identities = 311/351 (88%) Strand = Plus / Plus Query: 170 ctggggactgcgtgctaatgagatcagctgatacatcaaagccaccatatgtggcaaaag 229 |||||||||| ||||||||||| || ||||||||||||||||||| |||||||||| || Sbjct: 106652 ctggggactgtgtgctaatgagggcatctgatacatcaaagccaccctatgtggcaagag 106711 Query: 230 ttgagtccatcgaggcagcagggtctcgaggcacaaatgtgagagtacgggttcgatggt 289 ||||| | || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 106712 ttgaggctattgaggctgcagggtcacgaggcacaaatgtgagagtacgggtgcggtggt 106771 Query: 290 actatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagaggtat 349 ||||||| ||||| || || || ||||| ||||| |||||||||||| | |||||||| | Sbjct: 106772 actatcggccagaggagtccatgggtggaaggcgtccatttcatggtgccaaagaggtgt 106831 Query: 350 tcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaatgtcc 409 ||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||| || | Sbjct: 106832 tcctctcggatcactatgacgtacagagtgctgacaccatagagggaaagtgcaacgttc 106891 Query: 410 acagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgccgct 469 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 106892 acagcttccgtagctacacaaagcttgattctgtcaatgctgaggacttcttctgtcgct 106951 Query: 470 ttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgt 520 |||| ||||||||||| | || || || ||||||||||| |||||||||| Sbjct: 106952 ttgagtacaaatcagccacaggaagcttcgtgcccgaccgcattgctgtgt 107002 Score = 109 bits (55), Expect = 2e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctc 581 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 109261 tgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgaggaatgctc 109319 Score = 109 bits (55), Expect = 2e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaacgagaacactttt 646 ||||||| |||||||| ||||||||||| |||||||| ||||| |||| ||| || |||| Sbjct: 110926 ggtttcacccttcttgcattggaatgactattaaagatgcaaaaaaactagagcattttt 110985 Query: 647 tctgccagagctgtaccgatgaaaatgggaagacaactgagaattctcatgaagc 701 |||||||||||||||| | |||||||| |||| ||||||||||||||||||| Sbjct: 110986 tctgccagagctgtactgcggaaaatggaaagatggctgagaattctcatgaagc 111040 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 104289 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 104348 Query: 154 gacaaagtcatcaagc 169 |||||||||||||||| Sbjct: 104349 gacaaagtcatcaagc 104364
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 379 bits (191), Expect = e-101 Identities = 311/351 (88%) Strand = Plus / Plus Query: 170 ctggggactgcgtgctaatgagatcagctgatacatcaaagccaccatatgtggcaaaag 229 |||||||||| ||||||||||| || ||||||||||||||||||| |||||||||| || Sbjct: 48685 ctggggactgtgtgctaatgagggcatctgatacatcaaagccaccctatgtggcaagag 48744 Query: 230 ttgagtccatcgaggcagcagggtctcgaggcacaaatgtgagagtacgggttcgatggt 289 ||||| | || ||||| |||||||| |||||||||||||||||||||||||| || |||| Sbjct: 48745 ttgaggctattgaggctgcagggtcacgaggcacaaatgtgagagtacgggtgcggtggt 48804 Query: 290 actatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagaggtat 349 ||||||| ||||| || || || ||||| ||||| |||||||||||| | |||||||| | Sbjct: 48805 actatcggccagaggagtccatgggtggaaggcgtccatttcatggtgccaaagaggtgt 48864 Query: 350 tcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaatgtcc 409 ||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||| || | Sbjct: 48865 tcctctcggatcactatgacgtacagagtgctgacaccatagagggaaagtgcaacgttc 48924 Query: 410 acagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgccgct 469 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 48925 acagcttccgtagctacacaaagcttgattctgtcaatgctgaggacttcttctgtcgct 48984 Query: 470 ttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgt 520 |||| ||||||||||| | || || || ||||||||||| |||||||||| Sbjct: 48985 ttgagtacaaatcagccacaggaagcttcgtgcccgaccgcattgctgtgt 49035 Score = 109 bits (55), Expect = 2e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctc 581 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51294 tgcaagtgtgagatgccatacaatcctgatgaccttatgatccaatgtgaggaatgctc 51352 Score = 109 bits (55), Expect = 2e-20 Identities = 100/115 (86%) Strand = Plus / Plus Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaacgagaacactttt 646 ||||||| |||||||| ||||||||||| |||||||| ||||| |||| ||| || |||| Sbjct: 52959 ggtttcacccttcttgcattggaatgactattaaagatgcaaaaaaactagagcattttt 53018 Query: 647 tctgccagagctgtaccgatgaaaatgggaagacaactgagaattctcatgaagc 701 |||||||||||||||| | |||||||| |||| ||||||||||||||||||| Sbjct: 53019 tctgccagagctgtactgcggaaaatggaaagatggctgagaattctcatgaagc 53073 Score = 103 bits (52), Expect = 1e-18 Identities = 70/76 (92%) Strand = Plus / Plus Query: 94 cccatggctaagacgcgcccgcccaagaggatactcgagtcctacaccatcaaggggtcc 153 |||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| Sbjct: 46322 cccatggcgaagtcgcggccgcccaagcggatcctcgagtcctacaccatcaagggctcc 46381 Query: 154 gacaaagtcatcaagc 169 |||||||||||||||| Sbjct: 46382 gacaaagtcatcaagc 46397
>ref|NM_001058113.1| Oryza sativa (japonica cultivar-group) Os03g0799600 (Os03g0799600) mRNA, complete cds Length = 1140 Score = 272 bits (137), Expect = 3e-69 Identities = 296/349 (84%) Strand = Plus / Plus Query: 286 tggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagag 345 |||||||| || |||||||| || |||||||| |||| ||||| ||||||||||| || Sbjct: 318 tggtactaccgcccagaagagtccattggtggccggcggccattccatggttcgaaggaa 377 Query: 346 gtattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaat 405 ||||| || ||||||||||||||| |||||||||||||| |||||||| || || || Sbjct: 378 gtatttctttctgaccactatgattcgcagagtgctgacaccatagagggcaagtgttat 437 Query: 406 gtccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgc 465 ||||||| ||| || ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 438 gtccacacctttcgagattacaccaagcttcgatctgtcagcgctgaggacttcttttgc 497 Query: 466 cgctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgttttgc 525 |||||||| |||||||| || | ||||| |||||||| |||||||| |||||||||||| Sbjct: 498 cgctttgagtacaaatctgccacaggcagctttgtgcctgaccgtatagctgtgttttgc 557 Query: 526 aagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctccgac 585 || ||||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||| Sbjct: 558 aaatgtgagatgccatacaatcctgataaccttatgatccaatgtgaggattgctctgac 617 Query: 586 tggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaac 634 |||||||||||||| ||| ||| ||| ||||| |||||||| ||||||| Sbjct: 618 tggtttcatccttcctgtgttgaaataaccatcaaagaagcgaagaaac 666 Score = 50.1 bits (25), Expect = 0.019 Identities = 73/89 (82%) Strand = Plus / Plus Query: 138 caccatcaaggggtccgacaaagtcatcaagcctggggactgcgtgctaatgagatcagc 197 ||||||||||||| ||||| ||||||||||||||||| |||||||||| || | Sbjct: 170 caccatcaaggggcccgacggggtcatcaagcctggggatactgtgctaatgatggcacc 229 Query: 198 tgatacatcaaagccaccatatgtggcaa 226 ||| |||||||| |||||||||||||| Sbjct: 230 tgactcatcaaagaaaccatatgtggcaa 258
>dbj|AK104450.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B02, full insert sequence Length = 1109 Score = 272 bits (137), Expect = 3e-69 Identities = 296/349 (84%) Strand = Plus / Plus Query: 286 tggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagag 345 |||||||| || |||||||| || |||||||| |||| ||||| ||||||||||| || Sbjct: 295 tggtactaccgcccagaagagtccattggtggccggcggccattccatggttcgaaggaa 354 Query: 346 gtattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaat 405 ||||| || ||||||||||||||| |||||||||||||| |||||||| || || || Sbjct: 355 gtatttctttctgaccactatgattcgcagagtgctgacaccatagagggcaagtgttat 414 Query: 406 gtccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgc 465 ||||||| ||| || ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 415 gtccacacctttcgagattacaccaagcttcgatctgtcagcgctgaggacttcttttgc 474 Query: 466 cgctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgttttgc 525 |||||||| |||||||| || | ||||| |||||||| |||||||| |||||||||||| Sbjct: 475 cgctttgagtacaaatctgccacaggcagctttgtgcctgaccgtatagctgtgttttgc 534 Query: 526 aagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctccgac 585 || ||||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||| Sbjct: 535 aaatgtgagatgccatacaatcctgataaccttatgatccaatgtgaggattgctctgac 594 Query: 586 tggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaac 634 |||||||||||||| ||| ||| ||| ||||| |||||||| ||||||| Sbjct: 595 tggtttcatccttcctgtgttgaaataaccatcaaagaagcgaagaaac 643 Score = 50.1 bits (25), Expect = 0.019 Identities = 73/89 (82%) Strand = Plus / Plus Query: 138 caccatcaaggggtccgacaaagtcatcaagcctggggactgcgtgctaatgagatcagc 197 ||||||||||||| ||||| ||||||||||||||||| |||||||||| || | Sbjct: 147 caccatcaaggggcccgacggggtcatcaagcctggggatactgtgctaatgatggcacc 206 Query: 198 tgatacatcaaagccaccatatgtggcaa 226 ||| |||||||| |||||||||||||| Sbjct: 207 tgactcatcaaagaaaccatatgtggcaa 235
>dbj|AK072569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128J04, full insert sequence Length = 1142 Score = 272 bits (137), Expect = 3e-69 Identities = 296/349 (84%) Strand = Plus / Plus Query: 286 tggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagag 345 |||||||| || |||||||| || |||||||| |||| ||||| ||||||||||| || Sbjct: 320 tggtactaccgcccagaagagtccattggtggccggcggccattccatggttcgaaggaa 379 Query: 346 gtattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaat 405 ||||| || ||||||||||||||| |||||||||||||| |||||||| || || || Sbjct: 380 gtatttctttctgaccactatgattcgcagagtgctgacaccatagagggcaagtgttat 439 Query: 406 gtccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgc 465 ||||||| ||| || ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 440 gtccacacctttcgagattacaccaagcttcgatctgtcagcgctgaggacttcttttgc 499 Query: 466 cgctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgttttgc 525 |||||||| |||||||| || | ||||| |||||||| |||||||| |||||||||||| Sbjct: 500 cgctttgagtacaaatctgccacaggcagctttgtgcctgaccgtatagctgtgttttgc 559 Query: 526 aagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctccgac 585 || ||||||||||| |||||||||||| |||||||||||||||||||||| ||||| ||| Sbjct: 560 aaatgtgagatgccatacaatcctgataaccttatgatccaatgtgaggattgctctgac 619 Query: 586 tggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaac 634 |||||||||||||| ||| ||| ||| ||||| |||||||| ||||||| Sbjct: 620 tggtttcatccttcctgtgttgaaataaccatcaaagaagcgaagaaac 668 Score = 50.1 bits (25), Expect = 0.019 Identities = 73/89 (82%) Strand = Plus / Plus Query: 138 caccatcaaggggtccgacaaagtcatcaagcctggggactgcgtgctaatgagatcagc 197 ||||||||||||| ||||| ||||||||||||||||| |||||||||| || | Sbjct: 172 caccatcaaggggcccgacggggtcatcaagcctggggatactgtgctaatgatggcacc 231 Query: 198 tgatacatcaaagccaccatatgtggcaa 226 ||| |||||||| |||||||||||||| Sbjct: 232 tgactcatcaaagaaaccatatgtggcaa 260
>emb|X77575.1|HVES43 H.vulgare (Dbg576) ES43 mRNA Length = 1058 Score = 226 bits (114), Expect = 1e-55 Identities = 351/430 (81%) Strand = Plus / Plus Query: 203 catcaaagccaccatatgtggcaaaagttgagtccatcgaggcagcagggtctcgaggca 262 |||||||||| ||||||||||| || ||||| |||||||||||||| |||| ||| Sbjct: 223 catcaaagcctccatatgtggccaagattgaggaaatcgaggcagcaggacctcggggcg 282 Query: 263 caaatgtgagagtacgggttcgatggtactatcgtccagaagaatcgattggtgggaggc 322 ||||||| | || || || |||||||| || |||||||| || ||||||||| || Sbjct: 283 caaatgtcaaggttaaagtgcggtggtactaccggccagaagagtctattggtgggcgga 342 Query: 323 gaccatttcatggttcgaaagaggtattcctctctgaccactatgatgtacagagtgctg 382 | ||||| ||| | || ||||| |||||||| |||||| | ||||| |||||||||| Sbjct: 343 ggccattccattgcgaaaaggaggtgttcctctccgaccaccaagatgtgcagagtgctg 402 Query: 383 acacaatagagggaaaatgcaatgtccacagcttccgtagctacacaaagcttgattctg 442 |||| |||||| | || ||||||||| |||||||||| |||||| ||||||| | ||| Sbjct: 403 acaccatagagtgcaagtgcaatgtctacagcttccgggactacaccaagcttgctgctg 462 Query: 443 tcaatgccgaggacttcttctgccgctttgactacaaatcagcatctggcagttttgtgc 502 ||||| | ||||||| || |||||||| || ||| | ||| | ||||| ||||||| Sbjct: 463 tcaatcctgaggactatttttgccgcttcgagtaccagtcaatcacaggcagctttgtgc 522 Query: 503 ccgaccgtattgctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatga 562 | ||||| || |||||||||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 523 ctgaccgcatagctgtgttttgcaagtgtgagatgccatacaaccctgacgatcttatga 582 Query: 563 tccaatgtgaggaatgctccgactggtttcatccttcttgtattggaatgaccattaaag 622 |||| |||||||||||||| || |||||||| ||| |||||||||||| |||||| |||| Sbjct: 583 tccagtgtgaggaatgctctgattggtttcaccctgcttgtattggaaagaccataaaag 642 Query: 623 aagcaaagaa 632 |||||||||| Sbjct: 643 aagcaaagaa 652 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Plus Query: 130 gagtcctacaccatcaaggggtccgac 156 |||||||||||||||||||| |||||| Sbjct: 150 gagtcctacaccatcaagggatccgac 176
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 133 bits (67), Expect = 2e-27 Identities = 193/235 (82%) Strand = Plus / Plus Query: 286 tggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagag 345 |||||||| || |||||||| || |||||||| |||| ||||| ||||||||||| || Sbjct: 33117548 tggtactaccgcccagaagagtccattggtggccggcggccattccatggttcgaaggaa 33117607 Query: 346 gtattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaat 405 ||||| || ||||||||||||||| |||||||||||||| |||||||| || || || Sbjct: 33117608 gtatttctttctgaccactatgattcgcagagtgctgacaccatagagggcaagtgttat 33117667 Query: 406 gtccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgc 465 ||||||| ||| || ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 33117668 gtccacacctttcgagattacaccaagcttcgatctgtcagcgctgaggacttcttttgc 33117727 Query: 466 cgctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgt 520 |||||||| |||||||| || | ||||| |||||||| |||||||| ||||||| Sbjct: 33117728 cgctttgagtacaaatctgccacaggcagctttgtgcctgaccgtatagctgtgt 33117782 Score = 101 bits (51), Expect = 6e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 519 gttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatg 578 ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| || Sbjct: 33118450 gttttgcaaatgtgagatgccatacaatcctgataaccttatgatccaatgtgaggattg 33118509 Query: 579 ctccgactggt 589 ||| ||||||| Sbjct: 33118510 ctctgactggt 33118520 Score = 48.1 bits (24), Expect = 0.074 Identities = 42/48 (87%) Strand = Plus / Plus Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaac 634 ||||||||||||| ||| ||| ||| ||||| |||||||| ||||||| Sbjct: 33119014 ggtttcatccttcctgtgttgaaataaccatcaaagaagcgaagaaac 33119061
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 133 bits (67), Expect = 2e-27 Identities = 193/235 (82%) Strand = Plus / Minus Query: 286 tggtactatcgtccagaagaatcgattggtgggaggcgaccatttcatggttcgaaagag 345 |||||||| || |||||||| || |||||||| |||| ||||| ||||||||||| || Sbjct: 96270 tggtactaccgcccagaagagtccattggtggccggcggccattccatggttcgaaggaa 96211 Query: 346 gtattcctctctgaccactatgatgtacagagtgctgacacaatagagggaaaatgcaat 405 ||||| || ||||||||||||||| |||||||||||||| |||||||| || || || Sbjct: 96210 gtatttctttctgaccactatgattcgcagagtgctgacaccatagagggcaagtgttat 96151 Query: 406 gtccacagcttccgtagctacacaaagcttgattctgtcaatgccgaggacttcttctgc 465 ||||||| ||| || ||||| |||||| ||||||| || ||||||||||| ||| Sbjct: 96150 gtccacacctttcgagattacaccaagcttcgatctgtcagcgctgaggacttcttttgc 96091 Query: 466 cgctttgactacaaatcagcatctggcagttttgtgcccgaccgtattgctgtgt 520 |||||||| |||||||| || | ||||| |||||||| |||||||| ||||||| Sbjct: 96090 cgctttgagtacaaatctgccacaggcagctttgtgcctgaccgtatagctgtgt 96036 Score = 101 bits (51), Expect = 6e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 519 gttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatg 578 ||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| || Sbjct: 95368 gttttgcaaatgtgagatgccatacaatcctgataaccttatgatccaatgtgaggattg 95309 Query: 579 ctccgactggt 589 ||| ||||||| Sbjct: 95308 ctctgactggt 95298 Score = 48.1 bits (24), Expect = 0.074 Identities = 42/48 (87%) Strand = Plus / Minus Query: 587 ggtttcatccttcttgtattggaatgaccattaaagaagcaaagaaac 634 ||||||||||||| ||| ||| ||| ||||| |||||||| ||||||| Sbjct: 94804 ggtttcatccttcctgtgttgaaataaccatcaaagaagcgaagaaac 94757
>gb|AY109695.1| Zea mays CL13667_1 mRNA sequence Length = 1086 Score = 81.8 bits (41), Expect = 5e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 522 ttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctc 581 |||||||||||||||||||||||| || |||||||| ||| | || ||||| | |||| Sbjct: 628 ttgcaagtgtgagatgccgtacaacccggatgacctcatggtgcagtgtgaaggatgcaa 569 Query: 582 cgactggtttcatccttcttgtattggaatgaccatt 618 |||||||| ||||| |||||||| |||||||||||| Sbjct: 568 ggactggttccatccgtcttgtatgggaatgaccatt 532 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 451 gaggacttcttctgccgctttgactacaa 479 |||||||||| |||||| ||||||||||| Sbjct: 699 gaggacttctactgccgatttgactacaa 671
>ref|NM_120070.2| Arabidopsis thaliana SHL1 (SHORT LIFE) (SHL1) mRNA, complete cds Length = 1194 Score = 75.8 bits (38), Expect = 3e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaa 576 ||||| |||||||||||||||||||| || || |||||| | ||| | ||||| ||||| Sbjct: 566 gtgttctgcaagtgtgagatgccgtataacccagatgacttgatggtgcaatgcgaggag 625 Query: 577 tgctccgactggtttcatccttcttgtattggaa 610 || || || |||||||||||||||||||| |||| Sbjct: 626 tgttctgagtggtttcatccttcttgtataggaa 659
>gb|AY079396.1| Arabidopsis thaliana putative ES43 protein (At4g39100) mRNA, complete cds Length = 718 Score = 75.8 bits (38), Expect = 3e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaa 576 ||||| |||||||||||||||||||| || || |||||| | ||| | ||||| ||||| Sbjct: 418 gtgttctgcaagtgtgagatgccgtataacccagatgacttgatggtgcaatgcgaggag 477 Query: 577 tgctccgactggtttcatccttcttgtattggaa 610 || || || |||||||||||||||||||| |||| Sbjct: 478 tgttctgagtggtttcatccttcttgtataggaa 511
>gb|AY050934.1| Arabidopsis thaliana putative ES43 protein (At4g39100) mRNA, complete cds Length = 922 Score = 75.8 bits (38), Expect = 3e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaa 576 ||||| |||||||||||||||||||| || || |||||| | ||| | ||||| ||||| Sbjct: 457 gtgttctgcaagtgtgagatgccgtataacccagatgacttgatggtgcaatgcgaggag 516 Query: 577 tgctccgactggtttcatccttcttgtattggaa 610 || || || |||||||||||||||||||| |||| Sbjct: 517 tgttctgagtggtttcatccttcttgtataggaa 550
>gb|AY088603.1| Arabidopsis thaliana clone 8278 mRNA, complete sequence Length = 1148 Score = 75.8 bits (38), Expect = 3e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaa 576 ||||| |||||||||||||||||||| || || |||||| | ||| | ||||| ||||| Sbjct: 566 gtgttctgcaagtgtgagatgccgtataacccagatgacttgatggtgcaatgcgaggag 625 Query: 577 tgctccgactggtttcatccttcttgtattggaa 610 || || || |||||||||||||||||||| |||| Sbjct: 626 tgttctgagtggtttcatccttcttgtataggaa 659
>gb|AF277453.1|AF277453 Arabidopsis thaliana putative PHD finger transcription factor (SHL1) mRNA, complete cds Length = 1062 Score = 75.8 bits (38), Expect = 3e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaa 576 ||||| |||||||||||||||||||| || || |||||| | ||| | ||||| ||||| Sbjct: 475 gtgttctgcaagtgtgagatgccgtataacccagatgacttgatggtgcaatgcgaggag 534 Query: 577 tgctccgactggtttcatccttcttgtattggaa 610 || || || |||||||||||||||||||| |||| Sbjct: 535 tgttctgagtggtttcatccttcttgtataggaa 568
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1132 taaggccctgtttggaacaataatagattatgataatctagatcatgaa 1180 |||||||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 8395 taaggccctgtttggaaccataatagattatgataatctggattatgaa 8443
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1132 taaggccctgtttggaacaataatagattatgataatctagatcatgaa 1180 |||||||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 60117 taaggccctgtttggaaccataatagattatgataatctggattatgaa 60165
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box transcription factor BM5A (VRN-H1) gene, complete cds Length = 12360 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1132 taaggccctgtttggaacaataatagattatgataatctagatcatgaa 1180 |||||||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 9166 taaggccctgtttggaaccataatagattatgataatctggattatgaa 9214
>gb|AY750993.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box transcription factor BM5A (VRN-H1) gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1132 taaggccctgtttggaacaataatagattatgataatctagatcatgaa 1180 |||||||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct: 14380 taaggccctgtttggaaccataatagattatgataatctggattatgaa 14428
>gb|AF142588.1|AF142588 Hordeum vulgare isoamylase 1 gene, partial cds Length = 3291 Score = 61.9 bits (31), Expect = 5e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 1134 aggccctgtttggaacaataatagattatgataat 1168 |||||||||||||||| |||||||||||||||||| Sbjct: 753 aggccctgtttggaaccataatagattatgataat 719
>gb|BT013292.1| Lycopersicon esculentum clone 134907F, mRNA sequence Length = 1040 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 512 ttgctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtg 571 ||||||||| || || ||||| ||||| ||||||||||||||||| ||| | ||||||| Sbjct: 514 ttgctgtgtactgtaaatgtgaaatgccatacaatcctgatgacctcatggttcaatgtg 573 Query: 572 aggaatgctccgactggtttcatccttcttgtat 605 ||| ||| ||||||||||| ||| ||||||| Sbjct: 574 agggctgcagtgactggtttcaccctacttgtat 607
>gb|DQ235172.1| Solanum tuberosum clone 155C09 unknown mRNA Length = 1036 Score = 58.0 bits (29), Expect = 8e-05 Identities = 104/129 (80%) Strand = Plus / Plus Query: 505 gaccgtattgctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatc 564 |||||| ||||||||| |||||||||||| ||||| || || || || || || ||| | Sbjct: 483 gaccgtgttgctgtgtattgcaagtgtgaaatgccctataacccggacgatctcatggta 542 Query: 565 caatgtgaggaatgctccgactggtttcatccttcttgtattggaatgaccattaaagaa 624 |||||||| | || |||||||| |||||| |||||| || ||||||||| ||||| Sbjct: 543 caatgtgaagggtgtaaagactggttccatcctatttgtatgggtatgaccattgaagaa 602 Query: 625 gcaaagaaa 633 ||||||||| Sbjct: 603 gcaaagaaa 611
>ref|NM_001069610.1| Oryza sativa (japonica cultivar-group) Os09g0386500 (Os09g0386500) mRNA, complete cds Length = 1139 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctcc 582 |||||||| ||||||||||| || || ||||| || ||| | || || |||| |||| Sbjct: 511 tgcaagtgcgagatgccgtataacccggatgatctaatggtgcagtgcgagggatgcaag 570 Query: 583 gactggtttcatccttcttgtattggaatgaccatt 618 |||||||| ||||| |||||||| |||||||||||| Sbjct: 571 gactggttccatccatcttgtatgggaatgaccatt 606 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 437 ccgaggacttcttctgccgcttcgagtacaa 467
>dbj|AK099307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141K03, full insert sequence Length = 1053 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctcc 582 |||||||| ||||||||||| || || ||||| || ||| | || || |||| |||| Sbjct: 498 tgcaagtgcgagatgccgtataacccggatgatctaatggtgcagtgcgagggatgcaag 557 Query: 583 gactggtttcatccttcttgtattggaatgaccatt 618 |||||||| ||||| |||||||| |||||||||||| Sbjct: 558 gactggttccatccatcttgtatgggaatgaccatt 593 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 424 ccgaggacttcttctgccgcttcgagtacaa 454
>dbj|AK064072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G12, full insert sequence Length = 1139 Score = 56.0 bits (28), Expect = 3e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtgaggaatgctcc 582 |||||||| ||||||||||| || || ||||| || ||| | || || |||| |||| Sbjct: 511 tgcaagtgcgagatgccgtataacccggatgatctaatggtgcagtgcgagggatgcaag 570 Query: 583 gactggtttcatccttcttgtattggaatgaccatt 618 |||||||| ||||| |||||||| |||||||||||| Sbjct: 571 gactggttccatccatcttgtatgggaatgaccatt 606 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 437 ccgaggacttcttctgccgcttcgagtacaa 467
>gb|BT014479.1| Lycopersicon esculentum clone 133830F, mRNA sequence Length = 1249 Score = 50.1 bits (25), Expect = 0.019 Identities = 52/61 (85%) Strand = Plus / Plus Query: 512 ttgctgtgttttgcaagtgtgagatgccgtacaatcctgatgaccttatgatccaatgtg 571 ||||||||| |||||||||||| ||||| ||||| || ||||| || ||| | ||||||| Sbjct: 628 ttgctgtgtattgcaagtgtgaaatgccctacaacccagatgatctcatggttcaatgtg 687 Query: 572 a 572 | Sbjct: 688 a 688
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 48.1 bits (24), Expect = 0.074 Identities = 45/52 (86%) Strand = Plus / Plus Query: 1131 gtaaggccctgtttggaacaataatagattatgataatctagatcatgaaga 1182 ||||||||| ||||| ||| |||||||||||| ||| | ||||| ||||||| Sbjct: 70611 gtaaggccccgtttgaaaccataatagattataatattatagattatgaaga 70662
>emb|CT829035.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055H17, full insert sequence Length = 1063 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 490 ccgaggacttcttctgccgcttcgagtacaa 520
>emb|CT833335.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051A11, full insert sequence Length = 1119 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 403 ccgaggacttcttctgccgcttcgagtacaa 433
>ref|NM_001068359.1| Oryza sativa (japonica cultivar-group) Os08g0421900 (Os08g0421900) mRNA, complete cds Length = 810 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 373 ccgaggacttcttctgccgcttcgagtacaa 403
>ref|NM_118335.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding (AT4G22140) mRNA, complete cds Length = 959 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Plus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 456 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 515 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 516 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 562 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 583 gactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaa 632 ||||||| ||||||| | ||| |||| ||||| ||| ||||||||||||| Sbjct: 728 gactggtatcatcctgcgtgtgttggcatgacgattgaagaagcaaagaa 777
>ref|NM_001036618.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding (AT4G22140) mRNA, complete cds Length = 1284 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Plus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 492 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 551 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 552 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 598 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 583 gactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaa 632 ||||||| ||||||| | ||| |||| ||||| ||| ||||||||||||| Sbjct: 764 gactggtatcatcctgcgtgtgttggcatgacgattgaagaagcaaagaa 813
>gb|BT011802.1| Arabidopsis thaliana At4g04260 mRNA sequence Length = 446 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Plus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 235 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 294 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 295 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 341
>gb|AY142507.1| Arabidopsis thaliana putative receptor protein (At4g22140) mRNA, complete cds Length = 622 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Plus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 119 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 178 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 179 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 225 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 583 gactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaa 632 ||||||| ||||||| | ||| |||| ||||| ||| ||||||||||||| Sbjct: 391 gactggtatcatcctgcgtgtgttggcatgacgattgaagaagcaaagaa 440
>dbj|AK222203.1| Arabidopsis thaliana mRNA for receptor like protein, complete cds, clone: RAFL25-08-H19 Length = 1277 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Plus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 457 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 516 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 517 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 563 Score = 44.1 bits (22), Expect = 1.1 Identities = 43/50 (86%) Strand = Plus / Plus Query: 583 gactggtttcatccttcttgtattggaatgaccattaaagaagcaaagaa 632 ||||||| ||||||| | ||| |||| ||||| ||| ||||||||||||| Sbjct: 729 gactggtatcatcctgcgtgtgttggcatgacgattgaagaagcaaagaa 778
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 20197993 ccgaggacttcttctgccgcttcgagtacaa 20198023
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 13128104 ccgaggacttcttctgccgcttcgagtacaa 13128134
>emb|AL161556.2|ATCHRIV56 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 56 Length = 196247 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Minus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 157214 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 157155 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 157154 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 157108
>emb|AL022140.1|ATF1N20 Arabidopsis thaliana DNA chromosome 4, BAC clone F1N20 (ESSA project) Length = 103270 Score = 46.1 bits (23), Expect = 0.29 Identities = 86/107 (80%) Strand = Plus / Minus Query: 311 ttggtgggaggcgaccatttcatggttcgaaagaggtattcctctctgaccactatgatg 370 ||||||| ||| ||| ||||||||| | |||||| | ||| | |||||||| | ||||| Sbjct: 102895 ttggtggtaggagacaatttcatggagccaaagagcttttcttgtctgaccattttgatg 102836 Query: 371 tacagagtgctgacacaatagagggaaaatgcaatgtccacagcttc 417 | || ||||| |||| || ||||||||||||| ||| |||| |||| Sbjct: 102835 ttcaaagtgcacacaccattgagggaaaatgcattgttcacaccttc 102789
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 50194 ccgaggacttcttctgccgcttcgagtacaa 50224
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 63779 ccgaggacttcttctgccgcttcgagtacaa 63809
>dbj|AK064578.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-E10, full insert sequence Length = 810 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 449 ccgaggacttcttctgccgctttgactacaa 479 |||||||||||||||||||||| || ||||| Sbjct: 373 ccgaggacttcttctgccgcttcgagtacaa 403
>gb|AC024568.6| Homo sapiens chromosome 5 clone CTD-2179L22, complete sequence Length = 128501 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1142 tttggaacaataatagattatg 1163 |||||||||||||||||||||| Sbjct: 115594 tttggaacaataatagattatg 115615
>gb|AC024578.3|AC024578 Homo sapiens chromosome 5 clone CTD-2363K11, complete sequence Length = 109685 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1142 tttggaacaataatagattatg 1163 |||||||||||||||||||||| Sbjct: 92211 tttggaacaataatagattatg 92190
>gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150676 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1035 tgccatgtggaatgttttgtgt 1056 |||||||||||||||||||||| Sbjct: 37851 tgccatgtggaatgttttgtgt 37830
>dbj|AB011445.1| Triticum aestivum WESR4 mRNA for Zinc-finger motif, partial cds Length = 367 Score = 44.1 bits (22), Expect = 1.1 Identities = 67/82 (81%) Strand = Plus / Plus Query: 537 gccgtacaatcctgatgaccttatgatccaatgtgaggaatgctccgactggtttcatcc 596 ||||||||| || |||||||| ||| | ||||| |||| |||| |||||||| ||||| Sbjct: 1 gccgtacaacccagatgacctcatggtgcaatgcgagggatgcaaagactggttccatcc 60 Query: 597 ttcttgtattggaatgaccatt 618 | ||||| |||||||||||| Sbjct: 61 aacctgtatgggaatgaccatt 82
>gb|AC104616.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0079H13 map E60284SA, complete sequence Length = 116863 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 914 aaatagaatttggacgctagtgtca 938 ||||||||||| ||||||||||||| Sbjct: 54147 aaatagaattttgacgctagtgtca 54123
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 914 aaatagaatttggacgctagtgtca 938 ||||||||||| ||||||||||||| Sbjct: 98270 aaatagaattttgacgctagtgtca 98294
>ref|XM_658841.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6329.2), mRNA Length = 9672 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 accgatgaaaatgggaagaca 681 ||||||||||||||||||||| Sbjct: 6595 accgatgaaaatgggaagaca 6615
>gb|AC000120.1| Homo sapiens BAC clone CTB-161K23 from 7, complete sequence Length = 142396 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 598 tcttgtattggaatgaccatt 618 ||||||||||||||||||||| Sbjct: 138812 tcttgtattggaatgaccatt 138832
>gb|AC141479.3| Mus musculus BAC clone RP23-281N15 from chromosome 12, complete sequence Length = 190974 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 757 gctggattaagttgatggaat 777 ||||||||||||||||||||| Sbjct: 23 gctggattaagttgatggaat 3
>gb|AC116471.8| Mus musculus chromosome 12, clone RP23-384N3, complete sequence Length = 240876 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 757 gctggattaagttgatggaat 777 ||||||||||||||||||||| Sbjct: 109000 gctggattaagttgatggaat 109020
>gb|AC103716.2| Homo sapiens chromosome 8, clone RP11-344I13, complete sequence Length = 180624 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1151 ataatagattatgataatcta 1171 ||||||||||||||||||||| Sbjct: 32453 ataatagattatgataatcta 32433
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 914 aaatagaatttggacgctagtgtca 938 ||||||||||| ||||||||||||| Sbjct: 5825595 aaatagaattttgacgctagtgtca 5825571
>gb|AC022679.9| Homo sapiens chromosome 8, clone RP11-386G21, complete sequence Length = 160766 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1151 ataatagattatgataatcta 1171 ||||||||||||||||||||| Sbjct: 41049 ataatagattatgataatcta 41069
>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete sequence Length = 189253 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 819 aggtctgtggtggtgtttgtg 839 ||||||||||||||||||||| Sbjct: 49586 aggtctgtggtggtgtttgtg 49566
>gb|AC087771.3|AC087771 Genomic Sequence for Medicago truncatula, clone 8D15, complete sequence Length = 69590 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 tgagaattctcatgaagccac 704 ||||||||||||||||||||| Sbjct: 11667 tgagaattctcatgaagccac 11687
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 42.1 bits (21), Expect = 4.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgac 555 |||||||||||||||||||| || || |||||| Sbjct: 133555 tgcaagtgtgagatgccgtataacccagatgac 133523
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 42.1 bits (21), Expect = 4.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgac 555 |||||||||||||||||||| || || |||||| Sbjct: 2092 tgcaagtgtgagatgccgtataacccagatgac 2060
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 42.1 bits (21), Expect = 4.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 523 tgcaagtgtgagatgccgtacaatcctgatgac 555 |||||||||||||||||||| || || |||||| Sbjct: 95545 tgcaagtgtgagatgccgtataacccagatgac 95513
>emb|AL591131.9| Mouse DNA sequence from clone RP23-151A11 on chromosome 11, complete sequence Length = 114878 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gagtagacaacaggaactttcccca 25 |||||||||||||| |||||||||| Sbjct: 47271 gagtagacaacagggactttcccca 47295
>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete sequence Length = 203901 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1043 ggaatgttttgtgtctttgtt 1063 ||||||||||||||||||||| Sbjct: 170813 ggaatgttttgtgtctttgtt 170833
>gb|AY104100.1| Zea mays PCO138599 mRNA sequence Length = 1040 Score = 42.1 bits (21), Expect = 4.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 517 gtgttttgcaagtgtgagatgccgtacaatcctgatgacct 557 |||| |||||| ||||||||||| ||||| || |||||||| Sbjct: 485 gtgtattgcaaatgtgagatgccatacaacccggatgacct 525
>gb|AC002324.1|AC002324 Mus musculus chromosome 11, clone 475_H_14, complete sequence Length = 171952 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gagtagacaacaggaactttcccca 25 |||||||||||||| |||||||||| Sbjct: 150555 gagtagacaacagggactttcccca 150531
>gb|AC002298.1|AC002298 Genomic sequence from Mouse 11, complete sequence Length = 42010 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gagtagacaacaggaactttcccca 25 |||||||||||||| |||||||||| Sbjct: 2128 gagtagacaacagggactttcccca 2104
>emb|Y12488.1|MMWHNGENE M.musculus whn gene Length = 47730 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gagtagacaacaggaactttcccca 25 |||||||||||||| |||||||||| Sbjct: 10333 gagtagacaacagggactttcccca 10309
>emb|AL772265.5| Mouse DNA sequence from clone RP23-2D7 on chromosome 2, complete sequence Length = 212009 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1043 ggaatgttttgtgtctttgtt 1063 ||||||||||||||||||||| Sbjct: 50838 ggaatgttttgtgtctttgtt 50858 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 207,172,497 Number of extensions: 10487732 Number of successful extensions: 196015 Number of sequences better than 10.0: 71 Number of HSP's gapped: 196002 Number of HSP's successfully gapped: 99 Length of query: 1197 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1174 Effective length of database: 18,503,978,556 Effective search space: 21723670824744 Effective search space used: 21723670824744 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)