ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf112c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q61070:EI24_MOUSE Etoposide-induced protein 2.4 - Mus musculus (... 103 1e-21
2O14681:EI24_HUMAN Etoposide-induced protein 2.4 - Homo sapiens (... 102 3e-21
3Q5UQ30:YL211_MIMIV Uncharacterized protein L211 - Mimivirus 47 2e-04
4P46061:RGP1_MOUSE Ran GTPase-activating protein 1 - Mus musculus... 32 4.1
5P54282:CAC1A_RAT Voltage-dependent P/Q-type calcium channel subu... 32 5.4
6P97445:CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel su... 32 5.4
7Q6BYE5:ASF1_DEBHA Histone chaperone ASF1 - Debaryomyces hansenii... 32 5.4
8Q4JAH5:APGM_SULAC 2,3-bisphosphoglycerate-independent phosphogly... 31 9.1

>Q61070:EI24_MOUSE Etoposide-induced protein 2.4 - Mus musculus (Mouse)|
          Length = 358
 Score =  103 bits (257), Expect = 1e-21
 Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
 Frame = +3

Query: 192 RIAQCFLLNGFIFLGSLLTLKSVVIPTLLWILPEQCDQSWGQHLCDHTAAVAMYSFLRSG 371
           RI QC   NG +F  SLL    V IP L  +          + + D +    ++S+L   
Sbjct: 88  RIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVT--------ARIIGDPSLHGDVWSWLEFF 139

Query: 372 LVEIFYVFWFYPLYIFSFIISTLWYGDIAKHALAVVKSKKLDASQASDSDPHNTSVSADR 551
           L  IF   W  PL++ S +++ +W+ DIA  A                       VS  +
Sbjct: 140 LTSIFSALWVLPLFVLSKVVNAIWFQDIADLAF---------------------EVSGRK 178

Query: 552 PEGFDGVAIGVGEQVYSILLLTIFFAEVTVIGYVPY--LGKAMNFLLLSLMYAYYCFEYK 725
           P  F  V+  + + ++++LL  +F  +   +   P   +G+ ++ L +SL+Y+ YCFEY+
Sbjct: 179 PHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYR 238

Query: 726 WNFFAVSLNHRLDFFESNWAFFAGFGSP-CVLPIFFFSPLTSYGVMAILYPLFVMTA 893
           W    + ++ RL   E NW ++ GFG P   L     S + S  + +IL+PLF+++A
Sbjct: 239 WFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA 295



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>O14681:EI24_HUMAN Etoposide-induced protein 2.4 - Homo sapiens (Human)|
          Length = 359

 Score =  102 bits (254), Expect = 3e-21
 Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
 Frame = +3

Query: 192 RIAQCFLLNGFIFLGSLLTLKSVVIPTLLWILPEQCDQSWGQHLCDHTAAVAMYSFLRSG 371
           RI QC   NG +F  SLL    V IP L  +          + + D +    ++S+L   
Sbjct: 89  RIFQCCAWNGGVFWFSLLLFYRVFIPVLQSVT--------ARIIGDPSLHGDVWSWLGFF 140

Query: 372 LVEIFYVFWFYPLYIFSFIISTLWYGDIAKHALAVVKSKKLDASQASDSDPHNTSVSADR 551
           L  IF   W  PL++ S +++ +W+ DIA  A                       VS  +
Sbjct: 141 LTSIFSAVWVLPLFVLSKVVNAIWFQDIADLAF---------------------EVSGRK 179

Query: 552 PEGFDGVAIGVGEQVYSILLLTIFFAEVTVIGYVPY--LGKAMNFLLLSLMYAYYCFEYK 725
           P  F  V+  + + ++++LL  +F  +   +   P   +G+ ++ L +SL+Y+ YCFEY+
Sbjct: 180 PHPFPSVSKIIADMLFNLLLQALFLIQGMFVSLFPIHLVGQLVSLLHMSLLYSLYCFEYR 239

Query: 726 WNFFAVSLNHRLDFFESNWAFFAGFGSP-CVLPIFFFSPLTSYGVMAILYPLFVMTA 893
           W    + ++ RL   E NW ++ GFG P   L     S + S  + +IL+PLF+++A
Sbjct: 240 WFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISA 296



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>Q5UQ30:YL211_MIMIV Uncharacterized protein L211 - Mimivirus|
          Length = 262

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
 Frame = +3

Query: 564 DGVAIGVGEQVYSILLLTIF-------FAEVTVIGYVPYLGKAMNFLLLSLMYAYYCFEY 722
           D + + +   VY + +  I        + ++ V+ Y+      + F++L+L +++ CF  
Sbjct: 113 DSIGLAIVSFVYQLSMYIIMELIDMMLYKKLDVVSYL------IKFIILTLYHSFCCFNN 166

Query: 723 KWNFFAVSLNHRLDFFESNWAFFAGFGS-PCVLPIFFFSPLTSY 851
            W++  + ++HR+   E  WA++ G+G+   ++ I+   PL  Y
Sbjct: 167 LWHYKNIDIHHRISLHEKLWAYYLGYGTIASLMYIYSNHPLMIY 210



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>P46061:RGP1_MOUSE Ran GTPase-activating protein 1 - Mus musculus (Mouse)|
          Length = 589

 Score = 32.3 bits (72), Expect = 4.1
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = -1

Query: 230 EDEPVEQEALRDSDRQSPRADAEGDDAVETRGLEEAGEPEHGS 102
           EDE  E+E   D + +    D E DD  E    EE   P+ GS
Sbjct: 363 EDEDEEEEGEEDDEEEEDEEDEEDDDEEEEEQEEEEEPPQRGS 405



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>P54282:CAC1A_RAT Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Rattus|
            norvegicus (Rat)
          Length = 2212

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -1

Query: 230  EDEPVEQEALRDSDRQSPRADAEGDDAVETRGLEEAGEPEHGSRLRLRGKR 78
            +D P  +   RD+ R +  AD EGDD  E +     G P H  R R   +R
Sbjct: 938  DDRPERRPRPRDATRPARAADGEGDDG-ERKRRHRHGPPAHDDRERRHRRR 987



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>P97445:CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Mus|
            musculus (Mouse)
          Length = 2368

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -1

Query: 230  EDEPVEQEALRDSDRQSPRADAEGDDAVETRGLEEAGEPEHGSRLRLRGKR 78
            +D P  +   RD+ R +  AD EGDD  E +     G P H  R R   +R
Sbjct: 938  DDRPERRPRPRDATRPARAADGEGDDG-ERKRRHRHGPPAHDDRERRHRRR 987



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>Q6BYE5:ASF1_DEBHA Histone chaperone ASF1 - Debaryomyces hansenii (Yeast) (Torulaspora|
           hansenii)
          Length = 264

 Score = 32.0 bits (71), Expect = 5.4
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 233 QEDEPVEQEALRDSDRQSPRADAEGDDAVETRGLEEAGE-PEHGSR 99
           +E+E  E+E   D + +    D EG++  E    EEA E  E+GS+
Sbjct: 172 EEEEEEEEEEEEDDEEEEEEKDVEGEEGEEGEDAEEAAEVEENGSK 217



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>Q4JAH5:APGM_SULAC 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -|
           Sulfolobus acidocaldarius
          Length = 413

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 459 KHALAVVKSKKLDASQASDSDPHNTSVSADRPEGFD 566
           +H +AVV S K  + + SD+DPH T V   + E  D
Sbjct: 148 EHRVAVVLSGKGLSDKISDTDPHETGVKVKKSEATD 183


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 214,435,007
Number of extensions: 4763968
Number of successful extensions: 14915
Number of sequences better than 10.0: 8
Number of HSP's gapped: 14886
Number of HSP's successfully gapped: 8
Length of query: 408
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 292
Effective length of database: 68,868,219
Effective search space: 20109519948
Effective search space used: 20109519948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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