ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf112c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001059370.1| Oryza sativa (japonica cultivar-group) Os04g... 307 5e-80
2dbj|AK067758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 1e-77
3emb|CR855172.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 168 3e-38
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 168 3e-38
5emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4,... 168 3e-38
6emb|CR854965.13| Zebrafish DNA sequence from clone DKEY-204L2, c... 42 4.6
7gb|AC149391.2| Phakopsora pachyrhizi clone JGIAFNA-5B17, complet... 42 4.6
8gb|AY735638.1| Arabidopsis thaliana chromosome 4 hypothetical pr... 42 4.6
9gb|AY735637.1| Arabidopsis thaliana chromosome 4 hypothetical pr... 42 4.6
10gb|AY735636.1| Arabidopsis thaliana chromosome 4 hypothetical pr... 42 4.6
11gb|BC073499.1| Xenopus laevis cDNA clone IMAGE:5572620, partial cds 42 4.6
12gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, co... 42 4.6
13ref|XM_824201.1| Trypanosoma brucei TREU927 hypothetical protein... 42 4.6
14gb|AC116607.5| Homo sapiens chromosome 18, clone RP11-323P22, co... 42 4.6
15gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 4.6
16gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, com... 42 4.6
17gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, co... 42 4.6
18gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, com... 42 4.6
19emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on ch... 42 4.6
20gb|AC025623.8| Homo sapiens chromosome 11, clone RP11-417O17, co... 42 4.6
21gb|AC104655.4| Homo sapiens BAC clone RP11-383P6 from 2, complet... 42 4.6
22emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 i... 42 4.6
23gb|AY924813.1| Arabidopsis thaliana hypothetical protein (At4g06... 42 4.6
24emb|CR854913.13| Zebrafish DNA sequence from clone DKEY-18P14 in... 42 4.6 
>ref|NM_001059370.1| Oryza sativa (japonica cultivar-group) Os04g0433200 (Os04g0433200)
           mRNA, complete cds
          Length = 2545
 Score =  307 bits (155), Expect = 5e-80
 Identities = 188/199 (94%)
 Strand = Plus / Plus

                                                                       
Query: 72  atggagtcgcttgcctcgcaagcgaagccggctgccgtgctctggctcgccggcttcctc 131
           |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 64  atggagtcgcttgcgtcgcaagcgaagccggcggccgtgctctggctcgccggcttcctc 123

                                                                       
Query: 132 caggccgcgcgtctccaccgcgtcgtctccttctgcgtcagctcgagggctctgtcgatc 191
           ||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||  |
Sbjct: 124 caggccgcgcgcctccaccgcgtcgtctccttctgcgccagctcgaggcctctgtcggcc 183

                                                                       
Query: 192 agaatcgcgcagtgcttcctgctcaacgggttcatcttcctggggagcttgctaaccttg 251
           || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | 
Sbjct: 184 aggatcgcgcagtgcttcctgctcaacgggttcatcttcctggggagcttgttaacccta 243

                              
Query: 252 aaatcggtggtcattccaa 270
           |||||||||||||||||||
Sbjct: 244 aaatcggtggtcattccaa 262



 Score =  272 bits (137), Expect = 3e-69
 Identities = 212/237 (89%)
 Strand = Plus / Plus

                                                                       
Query: 568 gggttgcgattggtgttggagaacaggtctattcgatacttcttttgactattttctttg 627
           ||||||| |||||| ||||||||||||||||||| || |||||||| |||||||||||| 
Sbjct: 728 gggttgcaattggtattggagaacaggtctattcaattcttcttttaactattttcttta 787

                                                                       
Query: 628 ctgaggttacagtaattggttacgtaccttaccttggtaaggcaatgaactttctgttac 687
            ||||||| |||||||||||||| |||||||| |||| ||| | ||||| || ||| || 
Sbjct: 788 ttgaggtttcagtaattggttacataccttactttgggaagcctatgaatttcctgctat 847

                                                                       
Query: 688 tgtctttgatgtatgcctactactgcttcgagtacaagtggaacttctttgcagtgagtc 747
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 848 tatctttgatgtatgcctactactgcttcgagtacaagtggaacttctttgcagtgagcc 907

                                                                    
Query: 748 tgaaccaccggcttgatttctttgagtcaaattgggctttctttgctggatttggta 804
           ||||  | ||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 908 tgaatgagcggcttgatttctttgagtcaaattgggccttttttgctggattcggta 964



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                        
Query: 801  ggtagtccatgtgtacttccgattttcttcttctctcctcttacaagttatggtgtgatg 860
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1655 ggtagtccatgtgtacttccaattttcttcttctctcctcttacaagttatggtgtaatg 1714

                       
Query: 861  gcaatacttta 871
            |||||||||||
Sbjct: 1715 gcaatacttta 1725



 Score =  111 bits (56), Expect = 6e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                        
Query: 886  tgacagctgctggtacacaagaagagcaagtcattgatgaactgaaaccttcgcatggag 945
            |||| ||||| ||||| |||| |||  |||| |||||| |||||||||||||||||||||
Sbjct: 2218 tgactgctgcaggtacccaagcagaaaaagtaattgatcaactgaaaccttcgcatggag 2277

                                                                        
Query: 946  ggaaactgaatagaatacctttattctttgtcgcgaagcgactaacgacacaagcgctgc 1005
            |||||||| | ||||||||| | |||||  | || |||||||||||||| |||| |||||
Sbjct: 2278 ggaaactgcagagaatacctgttttcttcatagctaagcgactaacgactcaagtgctgc 2337

                                            
Query: 1006 agttgttcccagaggcacaaaaggagcaatga 1037
            | ||||| ||||||| ||| || || ||||||
Sbjct: 2338 aattgtttccagaggtacacaaagaacaatga 2369



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 449 tgacattgctaagcatgctttggctgttgtgaaaagtaagaagctagatgcaagtcaagc 508
           ||||||||||||||||||||||| |||||||||||| ||||  |||||||||| | ||||
Sbjct: 543 tgacattgctaagcatgctttggatgttgtgaaaagaaagagcctagatgcaactaaagc 602

             
Query: 509 at 510
           ||
Sbjct: 603 at 604



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttctatgtattttggttttatcccctctacatcttcagctttataataagtacactttgg 443
           ||||||||||| ||||||||||| || ||||||||||||||  |  | ||||||||||||
Sbjct: 376 ttctatgtattatggttttatccactttacatcttcagcttcgtgttgagtacactttgg 435

                
Query: 444 tatgg 448
           |||||
Sbjct: 436 tatgg 440
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>dbj|AK067758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117O04, full
           insert sequence
          Length = 2548

 Score =  299 bits (151), Expect = 1e-77
 Identities = 187/199 (93%)
 Strand = Plus / Plus

                                                                       
Query: 72  atggagtcgcttgcctcgcaagcgaagccggctgccgtgctctggctcgccggcttcctc 131
           |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 65  atggagtcgcttgcgtcgcaagcgaagccggcggccgtgctctggctcgccggcttcctc 124

                                                                       
Query: 132 caggccgcgcgtctccaccgcgtcgtctccttctgcgtcagctcgagggctctgtcgatc 191
           ||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||  |
Sbjct: 125 caggccgcgcgcctccaccgcgtcgtctccttctgcgccagctagaggcctctgtcggcc 184

                                                                       
Query: 192 agaatcgcgcagtgcttcctgctcaacgggttcatcttcctggggagcttgctaaccttg 251
           || |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | 
Sbjct: 185 aggatcgcgcagtgcttcctgctcaacgggttcatcttcctggggagcttgttaacccta 244

                              
Query: 252 aaatcggtggtcattccaa 270
           |||||||||||||||||||
Sbjct: 245 aaatcggtggtcattccaa 263



 Score =  272 bits (137), Expect = 3e-69
 Identities = 212/237 (89%)
 Strand = Plus / Plus

                                                                       
Query: 568 gggttgcgattggtgttggagaacaggtctattcgatacttcttttgactattttctttg 627
           ||||||| |||||| ||||||||||||||||||| || |||||||| |||||||||||| 
Sbjct: 729 gggttgcaattggtattggagaacaggtctattcaattcttcttttaactattttcttta 788

                                                                       
Query: 628 ctgaggttacagtaattggttacgtaccttaccttggtaaggcaatgaactttctgttac 687
            ||||||| |||||||||||||| |||||||| |||| ||| | ||||| || ||| || 
Sbjct: 789 ttgaggtttcagtaattggttacataccttactttgggaagcctatgaatttcctgctat 848

                                                                       
Query: 688 tgtctttgatgtatgcctactactgcttcgagtacaagtggaacttctttgcagtgagtc 747
           | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 849 tatctttgatgtatgcctactactgcttcgagtacaagtggaacttctttgcagtgagcc 908

                                                                    
Query: 748 tgaaccaccggcttgatttctttgagtcaaattgggctttctttgctggatttggta 804
           ||||  | ||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 909 tgaatgagcggcttgatttctttgagtcaaattgggccttttttgctggattcggta 965



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                        
Query: 801  ggtagtccatgtgtacttccgattttcttcttctctcctcttacaagttatggtgtgatg 860
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1656 ggtagtccatgtgtacttccaattttcttcttctctcctcttacaagttatggtgtaatg 1715

                       
Query: 861  gcaatacttta 871
            |||||||||||
Sbjct: 1716 gcaatacttta 1726



 Score =  111 bits (56), Expect = 6e-21
 Identities = 128/152 (84%)
 Strand = Plus / Plus

                                                                        
Query: 886  tgacagctgctggtacacaagaagagcaagtcattgatgaactgaaaccttcgcatggag 945
            |||| ||||| ||||| |||| |||  |||| |||||| |||||||||||||||||||||
Sbjct: 2219 tgactgctgcaggtacccaagcagaaaaagtaattgatcaactgaaaccttcgcatggag 2278

                                                                        
Query: 946  ggaaactgaatagaatacctttattctttgtcgcgaagcgactaacgacacaagcgctgc 1005
            |||||||| | ||||||||| | |||||  | || |||||||||||||| |||| |||||
Sbjct: 2279 ggaaactgcagagaatacctgttttcttcatagctaagcgactaacgactcaagtgctgc 2338

                                            
Query: 1006 agttgttcccagaggcacaaaaggagcaatga 1037
            | ||||| ||||||| ||| || || ||||||
Sbjct: 2339 aattgtttccagaggtacacaaagaacaatga 2370



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 449 tgacattgctaagcatgctttggctgttgtgaaaagtaagaagctagatgcaagtcaagc 508
           ||||||||||||||||||||||| |||||||||||| ||||  |||||||||| | ||||
Sbjct: 544 tgacattgctaagcatgctttggatgttgtgaaaagaaagagcctagatgcaactaaagc 603

             
Query: 509 at 510
           ||
Sbjct: 604 at 605



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttctatgtattttggttttatcccctctacatcttcagctttataataagtacactttgg 443
           ||||||||||| ||||||||||| || ||||||||||||||  |  | ||||||||||||
Sbjct: 377 ttctatgtattatggttttatccactttacatcttcagcttcgtgttgagtacactttgg 436

                
Query: 444 tatgg 448
           |||||
Sbjct: 437 tatgg 441
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>emb|CR855172.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315E07, complete
             sequence
          Length = 80854

 Score =  168 bits (85), Expect = 3e-38
 Identities = 94/97 (96%)
 Strand = Plus / Plus

                                                                         
Query: 72    atggagtcgcttgcctcgcaagcgaagccggctgccgtgctctggctcgccggcttcctc 131
             |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 57366 atggagtcgcttgcgtcgcaagcgaagccggcggccgtgctctggctcgccggcttcctc 57425

                                                  
Query: 132   caggccgcgcgtctccaccgcgtcgtctccttctgcg 168
             ||||||||||| |||||||||||||||||||||||||
Sbjct: 57426 caggccgcgcgcctccaccgcgtcgtctccttctgcg 57462



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                         
Query: 801   ggtagtccatgtgtacttccgattttcttcttctctcctcttacaagttatggtgtgatg 860
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 61481 ggtagtccatgtgtacttccaattttcttcttctctcctcttacaagttatggtgtaatg 61540

                        
Query: 861   gcaatacttta 871
             |||||||||||
Sbjct: 61541 gcaatacttta 61551



 Score =  115 bits (58), Expect = 4e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                         
Query: 719   gtacaagtggaacttctttgcagtgagtctgaaccaccggcttgatttctttgagtcaaa 778
             ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||
Sbjct: 60707 gtacaagtggaacttctttgcagtgagcctgaatgagcggcttgatttctttgagtcaaa 60766

                                       
Query: 779   ttgggctttctttgctggatttggta 804
             |||||| || ||||||||||| ||||
Sbjct: 60767 ttgggccttttttgctggattcggta 60792



 Score =  105 bits (53), Expect = 4e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                         
Query: 170   cagctcgagggctctgtcgatcagaatcgcgcagtgcttcctgctcaacgggttcatctt 229
             |||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 57638 cagctcgaggcctctgtcggccaggatcgcgcagtgcttcctgctcaacgggttcatctt 57697

                      
Query: 230   cctggggag 238
             |||||||||
Sbjct: 57698 cctggggag 57706



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 631   aggttacagtaattggttacgtaccttaccttggtaaggcaatgaactttctgttactgt 690
             ||||| |||||||||||||| |||||||| |||| ||| | ||||| || ||| || | |
Sbjct: 60516 aggtttcagtaattggttacataccttactttgggaagcctatgaatttcctgctattat 60575

                                            
Query: 691   ctttgatgtatgcctactactgcttcgagta 721
             |||||||||||||||||||||||||||||||
Sbjct: 60576 ctttgatgtatgcctactactgcttcgagta 60606



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 886   tgacagctgctggtacacaagaagagcaagtcattgatgaactgaaaccttcgcatggag 945
             |||| ||||| ||||| |||| |||  |||| |||||| |||||||||||||||||||||
Sbjct: 62044 tgactgctgcaggtacccaagcagaaaaagtaattgatcaactgaaaccttcgcatggag 62103

                                                            
Query: 946   ggaaactgaatagaatacctttattctttgtcgcgaagcgactaacg 992
             |||||||| | ||||||||| | |||||  | || ||||||||||||
Sbjct: 62104 ggaaactgcagagaatacctgtgttcttcatagctaagcgactaacg 62150



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 568   gggttgcgattggtgttggagaacaggtctattcgatacttcttttgactattttcttt 626
             ||||||| |||||| ||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 60295 gggttgcaattggtattggagaacaggtctattcaattcttcttttaactattttcttt 60353



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 449   tgacattgctaagcatgctttggctgttgtgaaaagtaagaagctagatgcaagtcaagc 508
             ||||||||||||||||||||||| |||||||||||| ||||  |||||||||| | ||||
Sbjct: 60110 tgacattgctaagcatgctttggatgttgtgaaaagaaagagcctagatgcaactaaagc 60169

               
Query: 509   at 510
             ||
Sbjct: 60170 at 60171



 Score = 48.1 bits (24), Expect = 0.075
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 390   gtattttggttttatcccctctacatcttcagctttataataagtacactttggta 445
             ||||| ||||||||||| || ||||||||||||||  |  | ||||||||||||||
Sbjct: 59135 gtattatggttttatccactttacatcttcagcttcgtgttgagtacactttggta 59190



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 237   agcttgctaaccttgaaatcggtggtcattccaa 270
             |||||| ||||| | |||||||||||||||||||
Sbjct: 58231 agcttgttaaccctaaaatcggtggtcattccaa 58264
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score =  168 bits (85), Expect = 3e-38
 Identities = 94/97 (96%)
 Strand = Plus / Plus

                                                                            
Query: 72       atggagtcgcttgcctcgcaagcgaagccggctgccgtgctctggctcgccggcttcctc 131
                |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 21521877 atggagtcgcttgcgtcgcaagcgaagccggcggccgtgctctggctcgccggcttcctc 21521936

                                                     
Query: 132      caggccgcgcgtctccaccgcgtcgtctccttctgcg 168
                ||||||||||| |||||||||||||||||||||||||
Sbjct: 21521937 caggccgcgcgcctccaccgcgtcgtctccttctgcg 21521973



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                            
Query: 801      ggtagtccatgtgtacttccgattttcttcttctctcctcttacaagttatggtgtgatg 860
                |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 21525993 ggtagtccatgtgtacttccaattttcttcttctctcctcttacaagttatggtgtaatg 21526052

                           
Query: 861      gcaatacttta 871
                |||||||||||
Sbjct: 21526053 gcaatacttta 21526063



 Score =  115 bits (58), Expect = 4e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                            
Query: 719      gtacaagtggaacttctttgcagtgagtctgaaccaccggcttgatttctttgagtcaaa 778
                ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||
Sbjct: 21525217 gtacaagtggaacttctttgcagtgagcctgaatgagcggcttgatttctttgagtcaaa 21525276

                                          
Query: 779      ttgggctttctttgctggatttggta 804
                |||||| || ||||||||||| ||||
Sbjct: 21525277 ttgggccttttttgctggattcggta 21525302



 Score =  105 bits (53), Expect = 4e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                            
Query: 170      cagctcgagggctctgtcgatcagaatcgcgcagtgcttcctgctcaacgggttcatctt 229
                |||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 21522149 cagctcgaggcctctgtcggccaggatcgcgcagtgcttcctgctcaacgggttcatctt 21522208

                         
Query: 230      cctggggag 238
                |||||||||
Sbjct: 21522209 cctggggag 21522217



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                            
Query: 631      aggttacagtaattggttacgtaccttaccttggtaaggcaatgaactttctgttactgt 690
                ||||| |||||||||||||| |||||||| |||| ||| | ||||| || ||| || | |
Sbjct: 21525026 aggtttcagtaattggttacataccttactttgggaagcctatgaatttcctgctattat 21525085

                                               
Query: 691      ctttgatgtatgcctactactgcttcgagta 721
                |||||||||||||||||||||||||||||||
Sbjct: 21525086 ctttgatgtatgcctactactgcttcgagta 21525116



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                            
Query: 886      tgacagctgctggtacacaagaagagcaagtcattgatgaactgaaaccttcgcatggag 945
                |||| ||||| ||||| |||| |||  |||| |||||| |||||||||||||||||||||
Sbjct: 21526556 tgactgctgcaggtacccaagcagaaaaagtaattgatcaactgaaaccttcgcatggag 21526615

                                                               
Query: 946      ggaaactgaatagaatacctttattctttgtcgcgaagcgactaacg 992
                |||||||| | ||||||||| | |||||  | || ||||||||||||
Sbjct: 21526616 ggaaactgcagagaatacctgttttcttcatagctaagcgactaacg 21526662



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                           
Query: 568      gggttgcgattggtgttggagaacaggtctattcgatacttcttttgactattttcttt 626
                ||||||| |||||| ||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 21524805 gggttgcaattggtattggagaacaggtctattcaattcttcttttaactattttcttt 21524863



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 449      tgacattgctaagcatgctttggctgttgtgaaaagtaagaagctagatgcaagtcaagc 508
                ||||||||||||||||||||||| |||||||||||| ||||  |||||||||| | ||||
Sbjct: 21524620 tgacattgctaagcatgctttggatgttgtgaaaagaaagagcctagatgcaactaaagc 21524679

                  
Query: 509      at 510
                ||
Sbjct: 21524680 at 21524681



 Score = 48.1 bits (24), Expect = 0.075
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 390      gtattttggttttatcccctctacatcttcagctttataataagtacactttggta 445
                ||||| ||||||||||| || ||||||||||||||  |  | ||||||||||||||
Sbjct: 21523644 gtattatggttttatccactttacatcttcagcttcgtgttgagtacactttggta 21523699



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 237      agcttgctaaccttgaaatcggtggtcattccaa 270
                |||||| ||||| | |||||||||||||||||||
Sbjct: 21522741 agcttgttaaccctaaaatcggtggtcattccaa 21522774
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>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19,
             complete sequence
          Length = 156002

 Score =  168 bits (85), Expect = 3e-38
 Identities = 94/97 (96%)
 Strand = Plus / Plus

                                                                         
Query: 72    atggagtcgcttgcctcgcaagcgaagccggctgccgtgctctggctcgccggcttcctc 131
             |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 43966 atggagtcgcttgcgtcgcaagcgaagccggcggccgtgctctggctcgccggcttcctc 44025

                                                  
Query: 132   caggccgcgcgtctccaccgcgtcgtctccttctgcg 168
             ||||||||||| |||||||||||||||||||||||||
Sbjct: 44026 caggccgcgcgcctccaccgcgtcgtctccttctgcg 44062



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                         
Query: 801   ggtagtccatgtgtacttccgattttcttcttctctcctcttacaagttatggtgtgatg 860
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 48082 ggtagtccatgtgtacttccaattttcttcttctctcctcttacaagttatggtgtaatg 48141

                        
Query: 861   gcaatacttta 871
             |||||||||||
Sbjct: 48142 gcaatacttta 48152



 Score =  115 bits (58), Expect = 4e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                         
Query: 719   gtacaagtggaacttctttgcagtgagtctgaaccaccggcttgatttctttgagtcaaa 778
             ||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||
Sbjct: 47306 gtacaagtggaacttctttgcagtgagcctgaatgagcggcttgatttctttgagtcaaa 47365

                                       
Query: 779   ttgggctttctttgctggatttggta 804
             |||||| || ||||||||||| ||||
Sbjct: 47366 ttgggccttttttgctggattcggta 47391



 Score =  105 bits (53), Expect = 4e-19
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                         
Query: 170   cagctcgagggctctgtcgatcagaatcgcgcagtgcttcctgctcaacgggttcatctt 229
             |||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||
Sbjct: 44238 cagctcgaggcctctgtcggccaggatcgcgcagtgcttcctgctcaacgggttcatctt 44297

                      
Query: 230   cctggggag 238
             |||||||||
Sbjct: 44298 cctggggag 44306



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 631   aggttacagtaattggttacgtaccttaccttggtaaggcaatgaactttctgttactgt 690
             ||||| |||||||||||||| |||||||| |||| ||| | ||||| || ||| || | |
Sbjct: 47115 aggtttcagtaattggttacataccttactttgggaagcctatgaatttcctgctattat 47174

                                            
Query: 691   ctttgatgtatgcctactactgcttcgagta 721
             |||||||||||||||||||||||||||||||
Sbjct: 47175 ctttgatgtatgcctactactgcttcgagta 47205



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 886   tgacagctgctggtacacaagaagagcaagtcattgatgaactgaaaccttcgcatggag 945
             |||| ||||| ||||| |||| |||  |||| |||||| |||||||||||||||||||||
Sbjct: 48645 tgactgctgcaggtacccaagcagaaaaagtaattgatcaactgaaaccttcgcatggag 48704

                                                            
Query: 946   ggaaactgaatagaatacctttattctttgtcgcgaagcgactaacg 992
             |||||||| | ||||||||| | |||||  | || ||||||||||||
Sbjct: 48705 ggaaactgcagagaatacctgttttcttcatagctaagcgactaacg 48751



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                        
Query: 568   gggttgcgattggtgttggagaacaggtctattcgatacttcttttgactattttcttt 626
             ||||||| |||||| ||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 46894 gggttgcaattggtattggagaacaggtctattcaattcttcttttaactattttcttt 46952



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 449   tgacattgctaagcatgctttggctgttgtgaaaagtaagaagctagatgcaagtcaagc 508
             ||||||||||||||||||||||| |||||||||||| ||||  |||||||||| | ||||
Sbjct: 46709 tgacattgctaagcatgctttggatgttgtgaaaagaaagagcctagatgcaactaaagc 46768

               
Query: 509   at 510
             ||
Sbjct: 46769 at 46770



 Score = 48.1 bits (24), Expect = 0.075
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 390   gtattttggttttatcccctctacatcttcagctttataataagtacactttggta 445
             ||||| ||||||||||| || ||||||||||||||  |  | ||||||||||||||
Sbjct: 45733 gtattatggttttatccactttacatcttcagcttcgtgttgagtacactttggta 45788



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 237   agcttgctaaccttgaaatcggtggtcattccaa 270
             |||||| ||||| | |||||||||||||||||||
Sbjct: 44830 agcttgttaaccctaaaatcggtggtcattccaa 44863
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>emb|CR854965.13| Zebrafish DNA sequence from clone DKEY-204L2, complete sequence
          Length = 60984

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1186  taataaagaaactatggttgt 1206
             |||||||||||||||||||||
Sbjct: 41808 taataaagaaactatggttgt 41788
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>gb|AC149391.2| Phakopsora pachyrhizi clone JGIAFNA-5B17, complete sequence
          Length = 42251

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1184  aataataaagaaactatggtt 1204
             |||||||||||||||||||||
Sbjct: 13874 aataataaagaaactatggtt 13854
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>gb|AY735638.1| Arabidopsis thaliana chromosome 4 hypothetical protein AT4G06676
           mRNA, complete cds, alternatively spliced
          Length = 1473

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 695 gatgtatgcctactactgcttcgagtacaagtggaacttct 735
           ||||||||||||||| || | ||| || |||||||||||||
Sbjct: 701 gatgtatgcctactattgttacgaatataagtggaacttct 741
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>gb|AY735637.1| Arabidopsis thaliana chromosome 4 hypothetical protein AT4G06676
           mRNA, complete cds, alternatively spliced
          Length = 1479

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 695 gatgtatgcctactactgcttcgagtacaagtggaacttct 735
           ||||||||||||||| || | ||| || |||||||||||||
Sbjct: 696 gatgtatgcctactattgttacgaatataagtggaacttct 736
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>gb|AY735636.1| Arabidopsis thaliana chromosome 4 hypothetical protein AT4G06676
           mRNA, complete cds, alternatively spliced
          Length = 1468

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 695 gatgtatgcctactactgcttcgagtacaagtggaacttct 735
           ||||||||||||||| || | ||| || |||||||||||||
Sbjct: 696 gatgtatgcctactattgttacgaatataagtggaacttct 736
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>gb|BC073499.1| Xenopus laevis cDNA clone IMAGE:5572620, partial cds
          Length = 5935

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1074 cttgtcatggaagtgatcatgttca 1098
            ||||||||||||||||| |||||||
Sbjct: 2155 cttgtcatggaagtgataatgttca 2179
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>gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, complete sequence
          Length = 225242

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 824    tttcttcttctctcctcttac 844
              |||||||||||||||||||||
Sbjct: 107154 tttcttcttctctcctcttac 107134
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>ref|XM_824201.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.4140)
           partial mRNA
          Length = 2580

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 554 tgaaggatttgatggggttgc 574
           |||||||||||||||||||||
Sbjct: 677 tgaaggatttgatggggttgc 697
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>gb|AC116607.5| Homo sapiens chromosome 18, clone RP11-323P22, complete sequence
          Length = 179986

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 673   tgaactttctgttactgtctt 693
             |||||||||||||||||||||
Sbjct: 30686 tgaactttctgttactgtctt 30666
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 117     ctcgccggcttcctccaggccgcgc 141
               |||||||||||||||||||| ||||
Sbjct: 1248285 ctcgccggcttcctccaggcggcgc 1248261
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>gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, complete sequence
          Length = 157587

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 673   tgaactttctgttactgtctt 693
             |||||||||||||||||||||
Sbjct: 92177 tgaactttctgttactgtctt 92157
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>gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, complete sequence
          Length = 163931

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 673   tgaactttctgttactgtctt 693
             |||||||||||||||||||||
Sbjct: 99500 tgaactttctgttactgtctt 99520
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>gb|AC068405.5| Homo sapiens chromosome 11, clone RP11-71F16, complete sequence
          Length = 154774

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   agattttctatgtattttggt 399
             |||||||||||||||||||||
Sbjct: 95073 agattttctatgtattttggt 95093
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>emb|AL445492.10| Human DNA sequence from clone RP11-137O18 on chromosome 10 Contains part
              of the gene for VPS10 domain receptor protein SORCS 3
              (SORCS3), complete sequence
          Length = 149248

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 824    tttcttcttctctcctcttac 844
              |||||||||||||||||||||
Sbjct: 137171 tttcttcttctctcctcttac 137191
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>gb|AC025623.8| Homo sapiens chromosome 11, clone RP11-417O17, complete sequence
          Length = 151329

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 379    agattttctatgtattttggt 399
              |||||||||||||||||||||
Sbjct: 145184 agattttctatgtattttggt 145164
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>gb|AC104655.4| Homo sapiens BAC clone RP11-383P6 from 2, complete sequence
          Length = 95616

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 763   atttctttgagtcaaattggg 783
             |||||||||||||||||||||
Sbjct: 27130 atttctttgagtcaaattggg 27150
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>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
             complete sequence
          Length = 168607

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1161  tgtacatatacatatattgtg 1181
             |||||||||||||||||||||
Sbjct: 29367 tgtacatatacatatattgtg 29347
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>gb|AY924813.1| Arabidopsis thaliana hypothetical protein (At4g06676) mRNA,
           complete cds
          Length = 963

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 695 gatgtatgcctactactgcttcgagtacaagtggaacttct 735
           ||||||||||||||| || | ||| || |||||||||||||
Sbjct: 615 gatgtatgcctactattgttacgaatataagtggaacttct 655
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>emb|CR854913.13| Zebrafish DNA sequence from clone DKEY-18P14 in linkage group 5,
             complete sequence
          Length = 99265

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 746   tctgaaccaccggcttgatttctttgagt 774
             |||||||||| ||||||||||||||||||
Sbjct: 20622 tctgaaccac-ggcttgatttctttgagt 20649


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 228,130,296
Number of extensions: 12739604
Number of successful extensions: 313389
Number of sequences better than 10.0: 24
Number of HSP's gapped: 313384
Number of HSP's successfully gapped: 61
Length of query: 1226
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1203
Effective length of database: 18,503,978,556
Effective search space: 22260286202868
Effective search space used: 22260286202868
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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