ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf115e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Os04g0357700:Os04g0357700 45 2e-05
2AK120657:Os06g0595800 34 0.056
3AK099523:Os11g0449600 30 0.81
4AK109895:Os10g0566400 28 3.1
5Os05g0435300:Os05g0435300 27 6.9
6AK104802:Os02g0817600 27 6.9
7AK069892:Os02g0817600 27 6.9
8AK104501:Os02g0817600 27 9.0 
>Os04g0357700:Os04g0357700 |
          Length = 118
 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
 Frame = +3

Query: 177 YSIDTAVRQRMS---QSSMKLEEGVDPELSIDLEVHRRVLAG-ISPGALNRNR 323
           + ID AVR+       SS +LE+ V PEL +D+E+HRR+LAG +  GAL  +R
Sbjct: 45  HGIDVAVRRLAMVAPSSSARLEDAVAPELGVDMELHRRILAGNVGSGALRPDR 97
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>AK120657:Os06g0595800 |
          Length = 431

 Score = 34.3 bits (77), Expect = 0.056
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   GRPPPVAKHCHIHRKHFPVQSGREWAD 81
           G PPPV +H H+HR H P+Q     AD
Sbjct: 177 GAPPPVPRHGHLHRLHRPLQGEVPGAD 203
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>AK099523:Os11g0449600 |
          Length = 104

 Score = 30.4 bits (67), Expect = 0.81
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 363 YTNRGCQKKYQCRG 404
           YT RGC+ +YQCRG
Sbjct: 90  YTGRGCKSRYQCRG 103
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>AK109895:Os10g0566400 |
          Length = 438

 Score = 28.5 bits (62), Expect = 3.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 326 RLPRRVPGARRVVHQPRMPEEVPVP 400
           R+P RVP  RR    P +P  VP+P
Sbjct: 167 RVPERVPRRRRAPPPPGVPPRVPLP 191
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>Os05g0435300:Os05g0435300 |
          Length = 220

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 462 SNVHACAGGCRPESPAAPFSHGTGTSSGILGWCTTL 355
           S+V  C G CRP + A+     TG    +  W   +
Sbjct: 69  SSVAGCCGCCRPRAGASESRRVTGIVCSVFSWIAAI 104
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>AK104802:Os02g0817600 |
          Length = 280

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
 Frame = -3

Query: 450 ACAGGCRPESPAAPFSHGTGTSS-----GILGW 367
           A AGG R E P A  S GT  S      G++GW
Sbjct: 82  AAAGGKRAEGPTATTSPGTVASGHPHSFGVVGW 114
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>AK069892:Os02g0817600 |
          Length = 280

 Score = 27.3 bits (59), Expect = 6.9
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
 Frame = -3

Query: 450 ACAGGCRPESPAAPFSHGTGTSS-----GILGW 367
           A AGG R E P A  S GT  S      G++GW
Sbjct: 82  AAAGGKRAEGPTATTSPGTVASGHPHSFGVVGW 114
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>AK104501:Os02g0817600 |
          Length = 281

 Score = 26.9 bits (58), Expect = 9.0
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -3

Query: 450 ACAGGCRPESPAAPFSHGT------GTSSGILGW 367
           A AGG R E P A  S GT       +S G++GW
Sbjct: 82  AAAGGKRAEGPTATTSPGTVASGHPHSSFGVVGW 115


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,038,795
Number of extensions: 225968
Number of successful extensions: 722
Number of sequences better than 10.0: 8
Number of HSP's gapped: 721
Number of HSP's successfully gapped: 8
Length of query: 184
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 90
Effective length of database: 11,636,001
Effective search space: 1047240090
Effective search space used: 1047240090
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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