Clone Information

BLAST Search Result

Clone Name	FLbaf115e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os04g28850:12004.t02580:unspliced-genomic expressed protein	44	1e-07
2	LOC_Os06g39470:12006.t03645:unspliced-genomic 10-deacetylbac...	38	0.020
3	LOC_Os09g22460:12009.t01979:unspliced-genomic F-box domain c...	39	0.034
4	LOC_Os06g18790:12006.t01702:unspliced-genomic anthocyanidin ...	36	0.23
5	LOC_Os09g30438:12009.t003577:unspliced-genomic expressed pro...	33	0.30
6	LOC_Os11g26340:12011.t02250:unspliced-genomic expressed protein	35	0.31
7	LOC_Os09g30414:12009.t02722:unspliced-genomic aspartic prote...	33	0.39
8	LOC_Os06g45600:12006.t04248:unspliced-genomic hypothetical p...	35	0.43
9	LOC_Os09g17080:12009.t01495:unspliced-genomic F-box domain c...	34	0.80
10	LOC_Os03g43440:12003.t03739:unspliced-genomic CBL-interactin...	34	0.80
11	LOC_Os02g32960:12002.t02939:unspliced-genomic conserved hypo...	34	1.1
12	LOC_Os01g65190:12001.t05885:unspliced-genomic POT family pro...	33	1.5
13	LOC_Os04g41350:12004.t03695:unspliced-genomic AAP3, putative...	27	1.6
14	LOC_Os05g34890:12005.t03082:unspliced-genomic hypothetical p...	25	1.7
15	LOC_Os12g11890:12012.t01062:unspliced-genomic retrotransposo...	33	2.1
16	LOC_Os12g09600:12012.t00839:unspliced-genomic retrotransposo...	33	2.1
17	LOC_Os04g28840:12004.t02579:unspliced-genomic hypothetical p...	33	2.1
18	LOC_Os04g52290:12004.t04705:unspliced-genomic EMB2217, putat...	32	2.9
19	LOC_Os04g52280:12004.t04704:unspliced-genomic mannitol dehyd...	32	2.9
20	LOC_Os03g38230:12003.t03271:unspliced-genomic expressed protein	32	2.9
21	LOC_Os12g41090:12012.t03786:unspliced-genomic CBL-interactin...	32	3.9
22	LOC_Os01g65169:12001.t05882:unspliced-genomic peptide transp...	28	5.2
23	LOC_Os12g28177:12012.t02528:unspliced-genomic cell Division ...	31	5.4
24	LOC_Os12g28137:12012.t02524:unspliced-genomic cell Division ...	31	5.4
25	LOC_Os10g41660:12010.t03399:unspliced-genomic zinc finger, C...	31	5.4
26	LOC_Os05g50990:12005.t04529:unspliced-genomic protein bindin...	31	5.4
27	LOC_Os05g22614:12005.t01921:unspliced-genomic expressed protein	31	5.4
28	LOC_Os04g37740:12004.t03344:unspliced-genomic RING-H2 finger...	31	5.4
29	LOC_Os04g31804:12004.t02861:unspliced-genomic NAP1-1, putati...	31	5.4
30	LOC_Os03g05530:12003.t00425:unspliced-genomic nodulin-like p...	31	5.4
31	LOC_Os02g57200:12002.t05292:unspliced-genomic expressed protein	31	5.4
32	LOC_Os02g38710:12002.t03509:unspliced-genomic protein phosph...	31	5.4
33	LOC_Os05g33140:12005.t02909:unspliced-genomic basic endochit...	28	6.5
34	LOC_Os03g12520:12003.t01051:unspliced-genomic protein kinase...	25	6.8
35	LOC_Os12g44320:12012.t04098:unspliced-genomic ATP binding pr...	27	6.8
36	LOC_Os10g11740:12010.t00971:unspliced-genomic retrotransposo...	29	7.3
37	LOC_Os06g18010:12006.t01673:unspliced-genomic hydroquinone g...	31	7.4
38	LOC_Os04g31410:12004.t02823:unspliced-genomic expressed protein	31	7.4
39	LOC_Os01g70870:12001.t06385:unspliced-genomic zinc finger, C...	31	7.4
40	LOC_Os01g65130:12001.t05879:unspliced-genomic oligopeptide t...	31	7.4
41	LOC_Os05g11650:12005.t00997:unspliced-genomic expressed protein	23	8.1
42	LOC_Os08g17830:12008.t01654:unspliced-genomic transposon pro...	24	8.5
43	LOC_Os06g10260:12006.t00904:unspliced-genomic conserved hypo...	29	8.7

>LOC_Os04g28850:12004.t02580:unspliced-genomic expressed protein|
          Length = 673
 Score = 44.1 bits (90), Expect(2) = 1e-07
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +3 / +3

                                     
Query: 216 SSMKLEEGVDPELSIDLEVHRRVLAG 293
           SS +LE+ V PEL +D+E+HRR+LAG
Sbjct: 207 SSARLEDAVAPELGVDMELHRRILAG 284



 Score = 30.9 bits (61), Expect(2) = 1e-07
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3 / +3

                                                    
Query: 276 RRVLAGISPGALNRNRXXXXXXXXXXXXSYTNRGCQKKYQC 398
           R +   +  GAL  +R            SYT RGC+  Y+C
Sbjct: 270 RILAGNVGSGALRPDRPACVQSCPARGGSYTGRGCKTVYRC 392

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>LOC_Os06g39470:12006.t03645:unspliced-genomic 10-deacetylbaccatin III 10-O-acetyltransferase, putative, expressed|
          Length = 1671

 Score = 38.2 bits (77), Expect(2) = 0.020
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1 / +1

                                      
Query: 1   GRPPPVAKHCHIHRKHFPVQSGREWAD 81
           G PPPV +H H+HR H P+Q     AD
Sbjct: 769 GAPPPVPRHGHLHRLHRPLQGEVPGAD 849



 Score = 21.7 bits (41), Expect(2) = 0.020
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2 / +1

                        
Query: 344  PGARRVVHQPRM 379
            P  RR  HQPR+
Sbjct: 1249 PRPRRAAHQPRL 1284

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>LOC_Os09g22460:12009.t01979:unspliced-genomic F-box domain containing protein|
          Length = 1152

 Score = 38.6 bits (78), Expect = 0.034
 Identities = 23/50 (46%), Positives = 25/50 (50%)
 Frame = +2 / +3

                                                             
Query: 323 ARLPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACTFDRRK 472
           AR PRR PGA  VV  P +   VP   L  AA L G   PA A    RR+
Sbjct: 30  ARRPRRGPGAAAVVEPPELRAVVPALALRRAALLPGVDHPAPAQHRPRRR 179

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>LOC_Os06g18790:12006.t01702:unspliced-genomic anthocyanidin 3-O-glucosyltransferase, putative|
          Length = 972

 Score = 35.9 bits (72), Expect = 0.23
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2 / -3

                                                  
Query: 368 QPRMPEEVPVPWLNGAAGLSGRQPPAHACTFDRRKFSFC 484
           +PR P   P PW  G+ G+  R PPA   +    + S C
Sbjct: 526 RPRRPRRGPPPWS*GSTGIGSRSPPAPPRSLGAGRCSRC 410

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>LOC_Os09g30438:12009.t003577:unspliced-genomic expressed protein|
          Length = 2352

 Score = 32.7 bits (65), Expect(2) = 0.30
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2 / +1

                                                
Query: 332  PRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQP 439
            P RVPG+RR   + R  E+ P P     AG   R+P
Sbjct: 2041 PGRVPGSRRG*QRRRRREDEPAPASTARAGARRREP 2148



 Score = 23.5 bits (45), Expect(2) = 0.30
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1 / +2

                           
Query: 7   PPPVAKHCHIHRKHFP 54
           PPP  +H    R+H P
Sbjct: 356 PPPTRRHRRCRRRHRP 403

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>LOC_Os11g26340:12011.t02250:unspliced-genomic expressed protein|
          Length = 730

 Score = 35.4 bits (71), Expect = 0.31
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3 / +2

                                           
Query: 363 YTNRGCQKKYQCRG*TEQQGSLADNLLRTHAR 458
           YT RGC+ +YQCRG  +    + DN+   + R
Sbjct: 302 YTGRGCKSRYQCRGM*DISIRVHDNIFTPYVR 397

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>LOC_Os09g30414:12009.t02722:unspliced-genomic aspartic proteinase nepenthesin-2 precursor, putative, expressed|
          Length = 3154

 Score = 32.7 bits (65), Expect(2) = 0.39
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2 / -2

                                                
Query: 332  PRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQP 439
            P RVPG+RR   + R  E+ P P     AG   R+P
Sbjct: 1116 PGRVPGSRRG*QRRRRREDEPAPASTARAGARRREP 1009



 Score = 23.5 bits (45), Expect(2) = 0.39
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1 / -3

                            
Query: 7    PPPVAKHCHIHRKHFP 54
            PPP  +H    R+H P
Sbjct: 2801 PPPTRRHRRCRRRHRP 2754

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>LOC_Os06g45600:12006.t04248:unspliced-genomic hypothetical protein|
          Length = 795

 Score = 35.0 bits (70), Expect = 0.43
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -3 / -2

                                           
Query: 468 RRSNVHACAGGCRPESPAAPFSHGTGTSSGIL 373
           RR     C GG RP SPAA  +    TSSG L
Sbjct: 266 RRRCPRTCGGGGRPSSPAAASASTASTSSGYL 171

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>LOC_Os09g17080:12009.t01495:unspliced-genomic F-box domain containing protein|
          Length = 960

 Score = 34.1 bits (68), Expect = 0.80
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +2 / +3

                                                                 
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACTFDRRKFSFCI 487
           R  RR PGA  VV  P +  +VP   L   A L G   PA A    RR+  + +
Sbjct: 33  RRARRDPGAPAVVEPPELRVDVPALALRRVALLPGVDHPAPAQHRPRRRHEYSV 194

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>LOC_Os03g43440:12003.t03739:unspliced-genomic CBL-interacting serine/threonine-protein kinase 15, putative,|
           expressed
          Length = 1707

 Score = 34.1 bits (68), Expect = 0.80
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2 / +1

                                                  
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPP 442
           R PRR P  RR+ H+  +PE  P      A G++   PP
Sbjct: 718 RPPRRPPAVRRLQHRRHVPEGAPPRVRAPAVGVAAGAPP 834

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>LOC_Os02g32960:12002.t02939:unspliced-genomic conserved hypothetical protein|
          Length = 703

 Score = 33.6 bits (67), Expect = 1.1
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2 / +1

                                    
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVP 400
           RLPRR PG R +  +PR P + P P
Sbjct: 385 RLPRRRPGLRLLARRPRPPAQPPRP 459

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>LOC_Os01g65190:12001.t05885:unspliced-genomic POT family protein, expressed|
          Length = 4108

 Score = 33.1 bits (66), Expect = 1.5
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2 / +3

                               
Query: 335 RRVPGARRVVHQPRMPEEVP 394
           RRVPGARRV+ +   P++VP
Sbjct: 324 RRVPGARRVLRRAGQPDDVP 383

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>LOC_Os04g41350:12004.t03695:unspliced-genomic AAP3, putative, expressed|
          Length = 1794

 Score = 26.7 bits (52), Expect(2) = 1.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2 / +3

                              
Query: 326 RLPRRVPGARRVVHQPRMP 382
           R PRRV   RR VH+P  P
Sbjct: 246 RAPRRVLPHRRPVHRPAQP 302



 Score = 23.5 bits (45), Expect(2) = 1.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2 / +2

                                      
Query: 398 PWLNGAAGLSGRQPPAHACTFDRRKFS 478
           P  + +A  S   PP+  CT ++  FS
Sbjct: 374 PTSSASASASPSPPPSACCTVNQNPFS 454

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>LOC_Os05g34890:12005.t03082:unspliced-genomic hypothetical protein|
          Length = 803

 Score = 24.9 bits (48), Expect(3) = 1.7
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2 / +2

                                 
Query: 326 RLPRRVPGARRVVHQPRMPEEV 391
           RLP R+P  R VV     PEEV
Sbjct: 548 RLPHRLPLCRVVVGLGMAPEEV 613



 Score = 21.7 bits (41), Expect(3) = 1.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1 / +1

                       
Query: 7   PPPVAKHCHIHR 42
           PP   + CH+HR
Sbjct: 109 PPMTEELCHLHR 144



 Score = 21.7 bits (41), Expect(3) = 1.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1 / +1

                      
Query: 58  QSGREWADTSL 90
           QSGR+W D  L
Sbjct: 295 QSGRQWMDREL 327

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>LOC_Os12g11890:12012.t01062:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2860

 Score = 32.7 bits (65), Expect = 2.1
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2 / +3

                                                    
Query: 347  GARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACTFDR 466
            G R  VH P  P  V V +L+  AG      P  AC+ DR
Sbjct: 1785 GVRHQVHNPGEPRRVLVDFLSCGAGDGDGGNPLQACSQDR 1904

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>LOC_Os12g09600:12012.t00839:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2433

 Score = 32.7 bits (65), Expect = 2.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2 / +3

                                   
Query: 460 ERACVRRRLSAREPCCSVQPRHWY 389
           E  C + RL  R PC   QPR WY
Sbjct: 81  ENTCRQARLHWRRPCSRRQPRGWY 152

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>LOC_Os04g28840:12004.t02579:unspliced-genomic hypothetical protein|
          Length = 2106

 Score = 32.7 bits (65), Expect = 2.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2 / +3

                                                
Query: 341 VPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHA 451
           VPGAR  VH+P +     +P    A  L+G + PA A
Sbjct: 270 VPGARAAVHRPGLHIRTRMPRQRAALSLTGEK*PAPA 380

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>LOC_Os04g52290:12004.t04705:unspliced-genomic EMB2217, putative, expressed|
          Length = 2968

 Score = 32.2 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2 / -1

                                                       
Query: 329  LPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACT 457
            LP   P     +H    P   P P L    GL G  PP   CT
Sbjct: 1102 LPSSSPPRAPSLHPTSQPSPAPPPRLCSPPGLHGAPPPPSPCT 974

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>LOC_Os04g52280:12004.t04704:unspliced-genomic mannitol dehydrogenase, putative, expressed|
          Length = 6057

 Score = 32.2 bits (64), Expect = 2.9
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2 / +2

                                                       
Query: 329  LPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACT 457
            LP   P     +H    P   P P L    GL G  PP   CT
Sbjct: 5702 LPSSSPPRAPSLHPTSQPSPAPPPRLCSPPGLHGAPPPPSPCT 5830

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>LOC_Os03g38230:12003.t03271:unspliced-genomic expressed protein|
          Length = 1941

 Score = 32.2 bits (64), Expect = 2.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2 / +3

                                    
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVP 400
           RLPRR PG R    +PR P + P P
Sbjct: 468 RLPRRRPGLRLPARRPRPPPQPPRP 542

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>LOC_Os12g41090:12012.t03786:unspliced-genomic CBL-interacting serine/threonine-protein kinase 15, putative,|
           expressed
          Length = 1519

 Score = 31.8 bits (63), Expect = 3.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2 / +3

                                                  
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPP 442
           R PRR P  RR+ H+  +PE  P      A G+    PP
Sbjct: 708 RPPRRPPPLRRLQHRRHVPEGAPPRVRAPAVGVPAGAPP 824

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>LOC_Os01g65169:12001.t05882:unspliced-genomic peptide transporter PTR2-B, putative, expressed|
          Length = 5731

 Score = 27.6 bits (54), Expect(2) = 5.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2 / +3

                               
Query: 335 RRVPGARRVVHQPRMPEEVP 394
           RRVPGA RV  +   P +VP
Sbjct: 225 RRVPGAHRVQRRAGQPGDVP 284



 Score = 25.4 bits (49), Expect(2) = 5.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = +1 / +1

                                         
Query: 382  RRSTSAVAERSSRALWPTTSCARMHVRST 468
            RRST        RA  PTTS AR    ST
Sbjct: 5311 RRSTGRRRGEEERAGSPTTSTARTSTTST 5397

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>LOC_Os12g28177:12012.t02528:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed|
          Length = 1877

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3 / +2

                                 
Query: 423 SPAAPFSHGTGTSSGILGWCTT 358
           +P++  S GT TS G  GWC+T
Sbjct: 395 APSSACSPGTRTSRGATGWCST 460

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>LOC_Os12g28137:12012.t02524:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed|
          Length = 1987

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3 / +1

                                 
Query: 423 SPAAPFSHGTGTSSGILGWCTT 358
           +P++  S GT TS G  GWC+T
Sbjct: 505 APSSACSPGTRTSRGATGWCST 570

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>LOC_Os10g41660:12010.t03399:unspliced-genomic zinc finger, C3HC4 type family protein, expressed|
          Length = 1564

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2 / +2

                                    
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVP 400
           R+P RVP  RR    P +P  VP+P
Sbjct: 500 RVPERVPRRRRAPPPPGVPPRVPLP 574

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>LOC_Os05g50990:12005.t04529:unspliced-genomic protein binding protein, putative, expressed|
          Length = 4397

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2 / +2

                                              
Query: 341  VPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPP 442
            VPG RRV  QPR     P P    A  + G  PP
Sbjct: 1031 VPGQRRVPQQPRRRAHRPRPPRRSAPRVRGGHPP 1132

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>LOC_Os05g22614:12005.t01921:unspliced-genomic expressed protein|
          Length = 5962

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2 / -2

                                        
Query: 445  RRRLSAREPCCSVQPRHWYFFWHPRLVY 362
            ++   AR P C + P   YF W  RLV+
Sbjct: 4158 KKTCEARGPICQLLPLSLYFLWKKRLVW 4075

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>LOC_Os04g37740:12004.t03344:unspliced-genomic RING-H2 finger protein ATL5G, putative, expressed|
          Length = 1754

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2 / +1

                                    
Query: 326 RLPRRVPGARRVVHQPRMPEEVPVP 400
           RLPRRVPG R     P++   VP P
Sbjct: 769 RLPRRVPGRRAGAPSPQVRPRVPRP 843

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>LOC_Os04g31804:12004.t02861:unspliced-genomic NAP1-1, putative, expressed|
          Length = 15951

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +2 / -3

                                                  
Query: 353 RRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAHACTFDRR 469
           RR   +PR+P  +P+P     A   G  P A  C  +RR
Sbjct: 262 RRSTTRPRLPILLPIPTSQSDAPKPGDAPRAPLCRLERR 146

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>LOC_Os03g05530:12003.t00425:unspliced-genomic nodulin-like protein, putative, expressed|
          Length = 5357

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2 / +2

                                          
Query: 469  TSIERACVRRRLSAREPCCSVQPRHWYFFW 380
            +S+     RRR  +  PC ++ PR W+  W
Sbjct: 4433 SSLSYGAPRRRAPSSSPCSTLSPRSWWPSW 4522

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>LOC_Os02g57200:12002.t05292:unspliced-genomic expressed protein|
          Length = 5369

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2 / +2

                                                     
Query: 535  VPTRLPHYSKIAESNINTK*EFTSIERACVRRRLSAREPCC 413
            VP++ P++ + A S I       +  R C ++ +S R PCC
Sbjct: 4454 VPSKRPYFRERAASFIKPGHVKPTCNRQCTKKFVSGRFPCC 4576

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>LOC_Os02g38710:12002.t03509:unspliced-genomic protein phosphatase 2C containing protein, expressed|
          Length = 6322

 Score = 31.3 bits (62), Expect = 5.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2 / -1

                                         
Query: 457  RACVRRRLSAREPCCSVQPRHWYFFWHPR 371
            R C RR  S R   C  QP+ W ++W  R
Sbjct: 5791 RWCCRRP*SRRRCSCQCQPQRWDWWWWSR 5705

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>LOC_Os05g33140:12005.t02909:unspliced-genomic basic endochitinase 1 precursor, putative, expressed|
          Length = 1367

 Score = 28.1 bits (55), Expect(2) = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1 / -1

                         
Query: 4   RPPPVAKHCHIHRK 45
           RPPP  +H H+HR+
Sbjct: 311 RPPPPRRHPHLHRR 270



 Score = 22.6 bits (43), Expect(2) = 6.5
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3 / -1

                           
Query: 33  HTQKTFPGPEWQRMGR 80
           HT +  P P W R  R
Sbjct: 122 HTARRLPAPPWPRRPR 75

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>LOC_Os03g12520:12003.t01051:unspliced-genomic protein kinase 1, putative, expressed|
          Length = 3284

 Score = 24.9 bits (48), Expect(2) = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2 / -3

                          
Query: 457  RACVRRRLSAREPC 416
            R C+  R+S REPC
Sbjct: 1620 RICIPCRMSCREPC 1579



 Score = 23.1 bits (44), Expect(2) = 6.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3 / -3

                          
Query: 552  IFFFFLFQQDCHII 511
            +FFFF F+ D H++
Sbjct: 1737 VFFFFGFRIDQHVV 1696

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>LOC_Os12g44320:12012.t04098:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 2833

 Score = 27.2 bits (53), Expect(2) = 6.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3 / -1

                                
Query: 468  RRSNVHACAGGCRPESPAAP 409
            RR     C+  CR  SPAAP
Sbjct: 2290 RRCPCPTCSSSCRARSPAAP 2231



 Score = 24.4 bits (47), Expect(2) = 6.8
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3 / -1

                                   
Query: 429  PESPAAPFSHGTGTSSGILGWCT 361
            P +PA     GTGT     G CT
Sbjct: 1957 PATPAGRRRRGTGTGPATRGSCT 1889

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>LOC_Os10g11740:12010.t00971:unspliced-genomic retrotransposon, putative, centromere-specific|
          Length = 2174

 Score = 29.0 bits (57), Expect(2) = 7.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2 / -2

                       
Query: 368 QPRMPEEVPVPW 403
           QPR+PE VP PW
Sbjct: 595 QPRIPEVVPTPW 560



 Score = 22.1 bits (42), Expect(2) = 7.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3 / -2

                                
Query: 3   ASSSSCKALPHTQKTFPGPEW 65
           + S  C   PHT +  P P W
Sbjct: 952 SQSGPCCRRPHT*RVSPRP*W 890

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>LOC_Os06g18010:12006.t01673:unspliced-genomic hydroquinone glucosyltransferase, putative, expressed|
          Length = 1620

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2 / +1

                                                   
Query: 329 LPRRVPGARRVVHQPRMPEEVPVPWLNGAAGLSGRQPPAH 448
           +PRR    RR   + R P  VP P     AG +  QPP H
Sbjct: 544 IPRRQRWRRRRRRRRRHPRRVPHPQGLHPAGAARSQPPLH 663

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>LOC_Os04g31410:12004.t02823:unspliced-genomic expressed protein|
          Length = 791

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2 / +2

                                     
Query: 323 ARLPRRVPGARRVVHQPRMPEEVPVP 400
           A + R++PGAR +VH+   P  +P P
Sbjct: 344 AEVHRQLPGARGIVHREGQPVHLPQP 421

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>LOC_Os01g70870:12001.t06385:unspliced-genomic zinc finger, C2H2 type family protein, expressed|
          Length = 3758

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2 / +3

                                  
Query: 460  ERACVRRRLSAREPCCSVQPRH 395
            E    RRRL+ R+ CC   PRH
Sbjct: 2928 ETRSCRRRLAWRDACCPASPRH 2993

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>LOC_Os01g65130:12001.t05879:unspliced-genomic oligopeptide transporter, putative, expressed|
          Length = 4183

 Score = 30.9 bits (61), Expect = 7.4
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2 / +2

                               
Query: 335 RRVPGARRVVHQPRMPEEVP 394
           RRVPGARRV  +   P +VP
Sbjct: 263 RRVPGARRVQRRAEQPGDVP 322

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>LOC_Os05g11650:12005.t00997:unspliced-genomic expressed protein|
          Length = 1724

 Score = 22.6 bits (43), Expect(3) = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1 / -2

                           
Query: 4    RPPPVAKHCHIHRKH 48
            +PPP A    +HR+H
Sbjct: 1576 QPPPPAAAGELHRRH 1532



 Score = 22.6 bits (43), Expect(3) = 8.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2 / -1

                                 
Query: 326  RLPRRVPGARRVVHQPRMPEE 388
            R   R PGARR     R PEE
Sbjct: 1226 RARERRPGARRGAALRRAPEE 1164



 Score = 22.6 bits (43), Expect(3) = 8.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2 / -3

                          
Query: 428 GRQPPAHACTFDRRK 472
           GR PPA A   DRR+
Sbjct: 708 GRAPPARARRGDRRR 664

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>LOC_Os08g17830:12008.t01654:unspliced-genomic transposon protein, putative, unclassified|
          Length = 6690

 Score = 24.0 bits (46), Expect(2) = 8.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2 / +3

                                 
Query: 389  VPVPWLNGAAGLSGRQPPAHA 451
            VPVP  +GA     R+PPA A
Sbjct: 5685 VPVPQRHGADHAELRRPPAGA 5747



 Score = 23.5 bits (45), Expect(2) = 8.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2 / +3

                        
Query: 341  VPGARRVVHQPR 376
            +PG RR VH PR
Sbjct: 5550 LPGVRRRVHDPR 5585

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>LOC_Os06g10260:12006.t00904:unspliced-genomic conserved hypothetical protein|
          Length = 1356

 Score = 28.6 bits (56), Expect(2) = 8.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2 / +3

                                           
Query: 371 PRMPEEVPVPWLNGAAGLSGRQPPAHACTFDR 466
           P  P   P P   G  G   R+P  HACT +R
Sbjct: 450 PGGPAARPAPRHGGHGGCLQRRPCRHACTGER 545



 Score = 21.7 bits (41), Expect(2) = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1 / +3

                             
Query: 1   GRPPPVAKHCHIHRKHFP 54
           G PP   +H H HR+  P
Sbjct: 306 GAPPLPRRHRHRHRRA*P 359


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 180,149,780
Number of extensions: 2596005
Number of successful extensions: 15356
Number of sequences better than 10.0: 43
Length of query: 184
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 136
Effective length of database: 52,912,542
Effective search space: 7196105712
Effective search space used: 7196105712
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result