ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111p24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068948:Os03g0852500 182 3e-46
2AK111240:Os08g0360000 70 2e-12
3Os06g0505100:Os06g0505100 31 1.3
4AK066010:Os11g0465200 28 6.2

>AK068948:Os03g0852500 |
          Length = 158
 Score =  182 bits (461), Expect = 3e-46
 Identities = 84/100 (84%), Positives = 92/100 (92%)
 Frame = +1

Query: 130 AWEVLRRHFSRKRAVDIRRINPKVPKEEAVAISGRLLQILADNGPLTVGNTWNHAKDAAI 309
           AWEVL+RHFSRKRAVD+RRINPKVPKEEAVAISGRLLQI  D+GPLTVGNTWNHAKDA I
Sbjct: 20  AWEVLKRHFSRKRAVDVRRINPKVPKEEAVAISGRLLQIFTDHGPLTVGNTWNHAKDAGI 79

Query: 310 DGLNSKTHMKVLLKWMWGRRIIKLSCTQVGNTKKFLYSPF 429
            GLNSKTHMK+LLKWM GRRI+KL+C   GN+KKFLYSP+
Sbjct: 80  SGLNSKTHMKILLKWMTGRRIVKLNCVGTGNSKKFLYSPY 119



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>AK111240:Os08g0360000 |
          Length = 132

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 30/92 (32%), Positives = 55/92 (59%)
 Frame = +1

Query: 148 RHFSRKRAVDIRRINPKVPKEEAVAISGRLLQILADNGPLTVGNTWNHAKDAAIDGLNSK 327
           R  ++K    +  I    P E+A +I+  +  ++ ++GPLT+ + W+H KD  + GL SK
Sbjct: 7   RWAAKKGKPKMAPIELPAPPEQAQSITRTIFDVVREHGPLTISDVWDHVKDVGLRGLTSK 66

Query: 328 THMKVLLKWMWGRRIIKLSCTQVGNTKKFLYS 423
             MK++++WM  ++ ++L C   G  K+FLY+
Sbjct: 67  RQMKIMMRWMREKQKLRLICDHDGPHKQFLYT 98



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>Os06g0505100:Os06g0505100 |
          Length = 2366

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 410 FLVLPTCVHESLMILLPHIHLSRTFMWVLLLRP---SIAASLAWFQVLPT 270
           F +  TC H  L+    H+H     +WVL   P   ++   L+W Q+L T
Sbjct: 319 FFLQLTCSHSKLVRFYTHMHHYSYLLWVLWYLPGTITLCLFLSWSQLLAT 368



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>AK066010:Os11g0465200 |
          Length = 513

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 23/73 (31%), Positives = 34/73 (46%)
 Frame = -1

Query: 347 SRTFMWVLLLRPSIAASLAWFQVLPTVRGPLSARIWRRRPEMATASSLGTLGLIRRISTA 168
           +RT++W LLL P I   L +   L      L+AR  R+ P   +  +L  +G +  I   
Sbjct: 6   ARTWLW-LLLSPLILLLLHYALAL------LTARRARKNPLPPSPPALPFIGHLHLIGAL 58

Query: 167 RFREKCLLSTSHA 129
                C L+T HA
Sbjct: 59  PHVSLCCLATKHA 71


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 18,027,943
Number of extensions: 370269
Number of successful extensions: 1212
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1212
Number of HSP's successfully gapped: 4
Length of query: 286
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 186
Effective length of database: 11,395,755
Effective search space: 2119610430
Effective search space used: 2119610430
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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