ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111p24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q05192:FTF1B_DROME Nuclear hormone receptor FTZ-F1 beta - Drosop... 32 3.2
2P24711:INVO_TARBA Involucrin - Tarsius bancanus (Western tarsier... 31 5.5

>Q05192:FTF1B_DROME Nuclear hormone receptor FTZ-F1 beta - Drosophila melanogaster|
           (Fruit fly)
          Length = 808
 Score = 32.0 bits (71), Expect = 3.2
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = -2

Query: 808 LTLTDPPFWPQISHNASQGS*IRSIRFSCHHYSTSESTTQSPANW----PASEICGNPNG 641
           LT    P+ P +S N S  S       SC+ YS+  S T SP       PA  + GN +G
Sbjct: 264 LTSRHAPYTPSLSRNNSDAS-----HSSCYSYSSEFSPTHSPIQARHAPPAGTLYGNHHG 318

Query: 640 PSRNL 626
             R +
Sbjct: 319 IYRQM 323



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>P24711:INVO_TARBA Involucrin - Tarsius bancanus (Western tarsier) (Horsfield's|
           tarsier)
          Length = 387

 Score = 31.2 bits (69), Expect = 5.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
 Frame = +3

Query: 276 QHLEPRQGCCDRRPQQQDPHEGPAQVDVGEEDH---------QALVHAGGQHQEVPLLPV 428
           Q  E   G   ++PQ+Q+ H G  Q   G+E H         +  VH G Q QE+    V
Sbjct: 90  QEQEVHPGKQQQKPQEQEAHLGKKQEPQGQEVHLGKQQQKTQEQEVHLGKQQQELQEQEV 149

Query: 429 H 431
           H
Sbjct: 150 H 150


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 107,584,160
Number of extensions: 2101984
Number of successful extensions: 5955
Number of sequences better than 10.0: 2
Number of HSP's gapped: 5946
Number of HSP's successfully gapped: 2
Length of query: 286
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 174
Effective length of database: 69,965,399
Effective search space: 12173979426
Effective search space used: 12173979426
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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