ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf115d02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099569:Os08g0425200 | 245 | 3e-65 | 2 | AK070287:Os03g0807900 | 44 | 1e-04 | 3 | AK060962:Os03g0807900 | 44 | 1e-04 | 4 | AK109499:Os12g0626000 | 30 | 1.5 | 5 | AK122178:Os06g0106800 | 30 | 2.0 | 6 | AK105911:Os06g0106800 | 30 | 2.0 | 7 | AK105782:Os06g0106800 | 30 | 2.0 | 8 | AK105650:Os06g0106800 | 30 | 2.0 | 9 | AK073364:Os06g0106800 | 30 | 2.0 | 10 | Os11g0598300:Os11g0598300 | 28 | 5.8 | 11 | AK064585:Os11g0579400 | 28 | 5.8 | 12 | AK071668:Os04g0219000 | 28 | 7.5 | 13 | Os04g0196500:Os04g0196500 | 28 | 9.8 |
|---|
>AK099569:Os08g0425200 | Length = 186 Score = 245 bits (625), Expect = 3e-65 Identities = 132/185 (71%), Positives = 144/185 (77%), Gaps = 10/185 (5%) Frame = +1 Query: 31 MVSSRCAV--LPHPAGVAP----RRRQHLPAQA--LWGPEXXXXXX--LVSFEAPPRCHK 180 M S RCA L HPAGVA RRR L Q LWG E S E PPRC K Sbjct: 1 MASPRCAAVALLHPAGVAAGGGARRRVLLLDQERPLWGTEVRRRRRRRFSSLETPPRCSK 60 Query: 181 MYVPGFGEGSPEKKAAISLLNFFNYLAVRIVLAQLESYNREAYVELKEFTSRNSVNDADS 360 MYVPGFGEGSPEKKAA +L +FFNY+AVR+VL QLESYNREAY EL +F +RNS+NDAD+ Sbjct: 61 MYVPGFGEGSPEKKAARNLQHFFNYIAVRVVLTQLESYNREAYGELMDFVNRNSLNDADT 120 Query: 361 FCKNLIRESPRHKALAMRILEVRSAYMKNDFEWDNLKKLSFKMVDEANIKLMRDYVLETS 540 FCK LIRESPRHK LAMRILEVRSAY+K+DFEWDNLK+LSFKMVDEAN KLMRDYVLETS Sbjct: 121 FCKKLIRESPRHKQLAMRILEVRSAYVKHDFEWDNLKRLSFKMVDEANTKLMRDYVLETS 180 Query: 541 HIEDE 555 HIED+ Sbjct: 181 HIEDD 185
>AK070287:Os03g0807900 | Length = 195 Score = 44.3 bits (103), Expect = 1e-04 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +1 Query: 229 ISLLNFFNYLAVRIVLAQLESYNREAYVELKEFTSRNSVNDADSFCKNLIRESPRHKALA 408 + L+N F Y AV+ VL QL N +Y L F + N D F + L +E + LA Sbjct: 83 VQLINVFTYKAVKTVLTQLYEMNPPSYRWLYNFVAVNKPTDGKVFLRALGKEK---QELA 139 Query: 409 MRILEVR-SAYMKNDFEWDNLKKLSFKMVDEANIKLMRDYVLET 537 R++ R Y K + D+ + ++ + + N+ LMR+ ++ET Sbjct: 140 ERVMITRLHLYSKWIKKCDH--AMMYERISDENLALMRERLMET 181
>AK060962:Os03g0807900 | Length = 195 Score = 44.3 bits (103), Expect = 1e-04 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +1 Query: 229 ISLLNFFNYLAVRIVLAQLESYNREAYVELKEFTSRNSVNDADSFCKNLIRESPRHKALA 408 + L+N F Y AV+ VL QL N +Y L F + N D F + L +E + LA Sbjct: 83 VQLINVFTYKAVKTVLTQLYEMNPPSYRWLYNFVAVNKPTDGKVFLRALGKEK---QELA 139 Query: 409 MRILEVR-SAYMKNDFEWDNLKKLSFKMVDEANIKLMRDYVLET 537 R++ R Y K + D+ + ++ + + N+ LMR+ ++ET Sbjct: 140 ERVMITRLHLYSKWIKKCDH--AMMYERISDENLALMRERLMET 181
>AK109499:Os12g0626000 | Length = 246 Score = 30.4 bits (67), Expect = 1.5 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 153 LRGPAPVPQDVRSRLWRGLAGEKGGDQSAQLLQLP 257 +R P P P D+++ WR L GE G +++L LP Sbjct: 163 MRCPCPCPSDLQA--WRNLVGEDGDAYASELSWLP 195
>AK122178:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 498 GEHKAHEGLCPGDQPHRRRRVKISHVSSAHLPCRSQSIR 614 G H+ H G P R R+ + H +AH P R ++R Sbjct: 420 GVHRRHAGAVPAAAGGARWRLPVPHGHAAHRPARHAAVR 458
>AK105911:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 498 GEHKAHEGLCPGDQPHRRRRVKISHVSSAHLPCRSQSIR 614 G H+ H G P R R+ + H +AH P R ++R Sbjct: 420 GVHRRHAGAVPAAAGGARWRLPVPHGHAAHRPARHAAVR 458
>AK105782:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 498 GEHKAHEGLCPGDQPHRRRRVKISHVSSAHLPCRSQSIR 614 G H+ H G P R R+ + H +AH P R ++R Sbjct: 420 GVHRRHAGAVPAAAGGARWRLPVPHGHAAHRPARHAAVR 458
>AK105650:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 498 GEHKAHEGLCPGDQPHRRRRVKISHVSSAHLPCRSQSIR 614 G H+ H G P R R+ + H +AH P R ++R Sbjct: 420 GVHRRHAGAVPAAAGGARWRLPVPHGHAAHRPARHAAVR 458
>AK073364:Os06g0106800 | Length = 499 Score = 30.0 bits (66), Expect = 2.0 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +3 Query: 498 GEHKAHEGLCPGDQPHRRRRVKISHVSSAHLPCRSQSIR 614 G H+ H G P R R+ + H +AH P R ++R Sbjct: 420 GVHRRHAGAVPAAAGGARWRLPVPHGHAAHRPARHAAVR 458
>Os11g0598300:Os11g0598300 | Length = 1422 Score = 28.5 bits (62), Expect = 5.8 Identities = 21/64 (32%), Positives = 32/64 (50%) Frame = -1 Query: 363 EAVSVVHGVAACELLELNICFSVVTLKLCQHNPDSQVIEEVEQTDRRLFLRRALSKAGNV 184 E++S VHG+ E LELN L C +N +E + +L LR L K G++ Sbjct: 1262 ESISGVHGLPKFEELELNSSSCGRLLSSCFYN-----VERI----AKLTLRGTLLKQGDL 1312 Query: 183 HLVA 172 ++A Sbjct: 1313 RIIA 1316
>AK064585:Os11g0579400 | Length = 356 Score = 28.5 bits (62), Expect = 5.8 Identities = 21/64 (32%), Positives = 32/64 (50%) Frame = -1 Query: 363 EAVSVVHGVAACELLELNICFSVVTLKLCQHNPDSQVIEEVEQTDRRLFLRRALSKAGNV 184 E++S VHG+ E LELN L C +N +E + +L LR L K G++ Sbjct: 196 ESISGVHGLPKFEELELNSSSCGRLLSSCFYN-----VERI----AKLTLRGTLLKQGDL 246 Query: 183 HLVA 172 ++A Sbjct: 247 RIIA 250
>AK071668:Os04g0219000 | Length = 171 Score = 28.1 bits (61), Expect = 7.5 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +1 Query: 37 SSRCAVLP--HPAGVAPRRRQHLPAQ 108 S RC LP HP VAPR+ LPA+ Sbjct: 129 SGRCGYLPLRHPPHVAPRQIHRLPAR 154
>Os04g0196500:Os04g0196500 | Length = 1449 Score = 27.7 bits (60), Expect = 9.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 635 FITMCSSNSVYLGLEMVRSRDDAAMGLHHPDTEPVVGSYR 754 F+ + S Y+ L M+RS+D+AA + H V S R Sbjct: 609 FLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEVESGR 648 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,775,580 Number of extensions: 539716 Number of successful extensions: 1544 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1542 Number of HSP's successfully gapped: 13 Length of query: 270 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 171 Effective length of database: 11,435,796 Effective search space: 1955521116 Effective search space used: 1955521116 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
