ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC126797.4| Mus musculus BAC clone RP23-443F6 from 1, complet... 46 0.46
2gb|AF034617.1|AF034617 Spinacia oleracea cytosolic heat shock 70... 46 0.46
3gb|CP000479.1| Mycobacterium avium 104, complete genome 44 1.8
4gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 44 1.8
5dbj|AB046433.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 44 1.8
6gb|AF262042.1|T15F17 Arabidopsis thaliana BAC T15F17 44 1.8
7gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 1.8
8gb|AF033852.1|AF033852 Spinacia oleracea cytosolic heat shock 70... 44 1.8
9gb|AF034616.1|AF034616 Spinacia oleracea cytosolic heat shock 70... 44 1.8
10ref|XM_001010652.1| Tetrahymena thermophila SB210 hypothetical p... 42 7.3
11ref|NR_003246.1| Homo sapiens golgi autoantigen, golgin subfamil... 42 7.3
12gb|CP000423.1| Lactobacillus casei ATCC 334, complete genome 42 7.3
13emb|CU104673.1| Gorilla DNA sequence from clone CH255-559J12, co... 42 7.3
14ref|XM_928707.2| PREDICTED: Homo sapiens similar to golgi autoan... 42 7.3
15ref|XM_001130543.1| PREDICTED: Homo sapiens similar to golgi aut... 42 7.3
16tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain... 42 7.3
17gb|AC186081.5| Canis Familiaris chromosome 5, clone XX-10I19, co... 42 7.3
18gb|AC183769.2| Pan troglodytes BAC clone CH251-341N5 from chromo... 42 7.3
19gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, c... 42 7.3
20gb|L48339.1|PSEPHZ Pseudomonas chlororaphis strain 30-84 PhzF (p... 42 7.3
21gb|AC170166.1| Homo sapiens chromosome 15 clone WI2-2404I6, comp... 42 7.3
22gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial ... 42 7.3
23gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and... 42 7.3
24gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, com... 42 7.3
25gb|AC115358.7| Mus musculus BAC clone RP23-190I17 from chromosom... 42 7.3
26gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, co... 42 7.3
27gb|AF100662.1| Caenorhabditis elegans fosmid H34C03, complete se... 42 7.3
28gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, c... 42 7.3
29gb|AC048382.7| Homo sapiens chromosome 15, clone RP11-182J1, com... 42 7.3
30gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, com... 42 7.3
31gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, c... 42 7.3
32gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, co... 42 7.3
33gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromo... 42 7.3
34gb|AC073561.4| Mus musculus strain C57BL/6J chromosome 12 clone ... 42 7.3
35gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, com... 42 7.3
36gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, co... 42 7.3
37gb|AC022748.10| Homo sapiens chromosome 15, clone RP11-160C18, c... 42 7.3
38gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, com... 42 7.3
39dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 7.3
40gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, comple... 42 7.3
41gb|AC080033.10| Homo sapiens chromosome 8, clone RP11-885J16, co... 42 7.3
42gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, comple... 42 7.3
43gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, comple... 42 7.3
44emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chr... 42 7.3
45emb|BX323860.7| Human DNA sequence from clone RP11-552D4 on chro... 42 7.3
46emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chr... 42 7.3
47emb|BX248415.2| Human DNA sequence from clone RP11-109P13 on chr... 42 7.3
48emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on ch... 42 7.3
49emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chr... 42 7.3
50gb|AC136704.9| Homo sapiens chromosome 15, clone RP11-671M22, co... 42 7.3
51gb|AF338108.1|AF338108 Cowdria ruminantium clone 11hw hypothetic... 42 7.3
52emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 42 7.3
53emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 42 7.3
54emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 42 7.3
55emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chro... 42 7.3
56emb|CR936812.1| Homo sapiens mRNA; cDNA DKFZp686C168 (from clone... 42 7.3
57gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 1... 42 7.3
58gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, com... 42 7.3
59gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete ... 42 7.3
60emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chrom... 42 7.3
61gb|AC146099.3| Pan troglodytes BAC clone RP43-5L2 from chromosom... 42 7.3
62gb|AC010931.17| Homo sapiens chromosome 15, clone RP11-247C2, co... 42 7.3
63dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 42 7.3
64gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, com... 42 7.3
65gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y,... 42 7.3
66gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, c... 42 7.3
67gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, com... 42 7.3
68dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 42 7.3
69gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, c... 42 7.3
70dbj|AP000368.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 7.3
71gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, com... 42 7.3
72dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 42 7.3
73gb|AC087856.6| Homo sapiens chromosome 8, clone RP11-4K16, compl... 42 7.3
74emb|CR354443.4| Human DNA sequence from clone DAMA-236L13 on chr... 42 7.3
75gb|AF266285.1|AF266285 Homo sapiens golgin-like protein (GLP) ge... 42 7.3
76gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 7.3
77gb|AC009514.2|AC009514 Homo sapiens chromosome 8 clone RP11-4K16... 42 7.3
78emb|AL953852.6| Zebrafish DNA sequence from clone CH211-213C6 in... 42 7.3 
>gb|AC126797.4| Mus musculus BAC clone RP23-443F6 from 1, complete sequence
          Length = 192663
 Score = 46.1 bits (23), Expect = 0.46
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 1605  ttcttgattcttgagctgtgcctgaggcacc 1635
             ||||||||||||||||| |||||| ||||||
Sbjct: 89189 ttcttgattcttgagctttgcctggggcacc 89219
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>gb|AF034617.1|AF034617 Spinacia oleracea cytosolic heat shock 70 protein (HSC70-3alpha)
            gene, complete cds
          Length = 5903

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 1855 tagaagcagcatatatagctcag 1877
            |||||||||||||||||||||||
Sbjct: 4726 tagaagcagcatatatagctcag 4704
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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 266     ctgttcgcgatcttcgagcccg 287
               ||||||||||||||||||||||
Sbjct: 2276521 ctgttcgcgatcttcgagcccg 2276500
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 137     cgcggcgacgagctggaaacgg 158
               ||||||||||||||||||||||
Sbjct: 2302538 cgcggcgacgagctggaaacgg 2302517
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>dbj|AB046433.1| Arabidopsis thaliana DNA, chromosome 5 centromere region,
            clone:F11C12
          Length = 116966

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1440 atcaagaaaagaaattgaatactgaa 1465
            |||||||| |||||||||||||||||
Sbjct: 6139 atcaagaacagaaattgaatactgaa 6164
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>gb|AF262042.1|T15F17 Arabidopsis thaliana BAC T15F17
          Length = 68352

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1440  atcaagaaaagaaattgaatactgaa 1465
             |||||||| |||||||||||||||||
Sbjct: 14480 atcaagaacagaaattgaatactgaa 14505
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 266     ctgttcgcgatcttcgagcccg 287
               ||||||||||||||||||||||
Sbjct: 2161757 ctgttcgcgatcttcgagcccg 2161778
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>gb|AF033852.1|AF033852 Spinacia oleracea cytosolic heat shock 70 protein (HSC70) mRNA,
            complete cds
          Length = 2184

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1855 tagaagcagcatatatagctca 1876
            ||||||||||||||||||||||
Sbjct: 2146 tagaagcagcatatatagctca 2125
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>gb|AF034616.1|AF034616 Spinacia oleracea cytosolic heat shock 70 protein (HSC70-3beta) gene,
            complete cds
          Length = 6425

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1855 tagaagcagcatatatagctca 1876
            ||||||||||||||||||||||
Sbjct: 5248 tagaagcagcatatatagctca 5227
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>ref|XM_001010652.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00112570)
            mRNA, complete cds
          Length = 2631

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 911  cattctggtcaagatgttttc 931
            |||||||||||||||||||||
Sbjct: 2547 cattctggtcaagatgttttc 2527
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>ref|NR_003246.1| Homo sapiens golgi autoantigen, golgin subfamily a-like pseudogene
           (FLJ40113) on chromosome 15
          Length = 13179

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 245 tcccattcccacccagagatactgt 269
           ||||||| |||||||||||||||||
Sbjct: 982 tcccattgccacccagagatactgt 958
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>gb|CP000423.1| Lactobacillus casei ATCC 334, complete genome
          Length = 2895264

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1429   ggatcattttgatcaagaaaagaaattga 1457
              ||||||| ||| |||||||||||||||||
Sbjct: 430364 ggatcatcttgctcaagaaaagaaattga 430336
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>emb|CU104673.1| Gorilla DNA sequence from clone CH255-559J12, complete sequence
          Length = 169876

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 63209 ccagtcttatgattcttgatt 63189
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>ref|XM_928707.2| PREDICTED: Homo sapiens similar to golgi autoantigen, golgin
            subfamily a-like, transcript variant 1 (LOC642346), mRNA
          Length = 11585

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 245  tcccattcccacccagagatactgt 269
            ||||||| |||||||||||||||||
Sbjct: 1271 tcccattgccacccagagatactgt 1247
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>ref|XM_001130543.1| PREDICTED: Homo sapiens similar to golgi autoantigen, golgin
            subfamily a-like, transcript variant 3 (LOC728636), mRNA
          Length = 11548

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 245  tcccattcccacccagagatactgt 269
            ||||||| |||||||||||||||||
Sbjct: 1271 tcccattgccacccagagatactgt 1247
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>tpe|BN000872.1| TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus,
               strain C57BL/6
          Length = 2500000

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1313    aaagaatcacatgctgagaaa 1333
               |||||||||||||||||||||
Sbjct: 1622149 aaagaatcacatgctgagaaa 1622169
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>gb|AC186081.5| Canis Familiaris chromosome 5, clone XX-10I19, complete sequence
          Length = 208272

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 592   taaatctgtcattttgctctc 612
             |||||||||||||||||||||
Sbjct: 18881 taaatctgtcattttgctctc 18861
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>gb|AC183769.2| Pan troglodytes BAC clone CH251-341N5 from chromosome 15, complete
             sequence
          Length = 171942

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 45599 tcccattgccacccagagatactgt 45623



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 118492 tcccattgccacccagagatactgt 118516
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>gb|AC009712.22| Homo sapiens chromosome 15, clone RP11-361M10, complete sequence
          Length = 213746

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 41201 tcccattaccacccagagatactgt 41177
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>gb|L48339.1|PSEPHZ Pseudomonas chlororaphis strain 30-84 PhzF (phzF), PhzA (phzA), PhzB
            (phzB), PhzC (phzC), and PhzD (phzD) genes, complete cds
          Length = 5698

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 426  tcgccgccttcaagcatgccg 446
            |||||||||||||||||||||
Sbjct: 1081 tcgccgccttcaagcatgccg 1101
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>gb|AC170166.1| Homo sapiens chromosome 15 clone WI2-2404I6, complete sequence
          Length = 39839

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 245 tcccattcccacccagagatactgt 269
           ||||||| |||||||||||||||||
Sbjct: 445 tcccattgccacccagagatactgt 421
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>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence
          Length = 114045

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    ggcggcggcgcgcgaggtggg 69
             |||||||||||||||||||||
Sbjct: 44726 ggcggcggcgcgcgaggtggg 44706
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>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b,
              G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3,
              BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete
              cds
          Length = 184666

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1593   ccagtcttatgattcttgatt 1613
              |||||||||||||||||||||
Sbjct: 108599 ccagtcttatgattcttgatt 108619
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>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence
          Length = 188138

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 128178 tcccattgccacccagagatactgt 128202
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>gb|AC115358.7| Mus musculus BAC clone RP23-190I17 from chromosome 18, complete
             sequence
          Length = 218573

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 842   tatgaatttgctatttatgag 862
             |||||||||||||||||||||
Sbjct: 48828 tatgaatttgctatttatgag 48808
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>gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, complete sequence
          Length = 168159

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 160465 tcccattgccacccagagatactgt 160489
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>gb|AF100662.1| Caenorhabditis elegans fosmid H34C03, complete sequence
          Length = 27748

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 600   tcattttgctctcatcctttc 620
             |||||||||||||||||||||
Sbjct: 13741 tcattttgctctcatcctttc 13721
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>gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, complete sequence
          Length = 213676

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 54733 tcccattgccacccagagatactgt 54709
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>gb|AC048382.7| Homo sapiens chromosome 15, clone RP11-182J1, complete sequence
          Length = 171486

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 24624 tcccattgccacccagagatactgt 24648
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>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence
          Length = 157246

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 24660 tcccattgccacccagagatactgt 24684



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 106442 tcccattgccacccagagatactgt 106466
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>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence
          Length = 175310

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 26912 tcccattgccacccagagatactgt 26888



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 105495 tcccattgccacccagagatactgt 105471
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>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence
          Length = 233775

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 100091 tcccattgccacccagagatactgt 100115
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>gb|AC182398.3| Pan troglodytes BAC clone CH251-119B5 from chromosome 15, complete
             sequence
          Length = 150565

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 34775 tcccattaccacccagagatactgt 34799
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>gb|AC073561.4| Mus musculus strain C57BL/6J chromosome 12 clone RP23-18L19, complete
             sequence
          Length = 184953

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1313  aaagaatcacatgctgagaaa 1333
             |||||||||||||||||||||
Sbjct: 44472 aaagaatcacatgctgagaaa 44452
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>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence
          Length = 169125

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 96276 tcccattgccacccagagatactgt 96300
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>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence
          Length = 193680

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 28086 tcccattgccacccagagatactgt 28062



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 106690 tcccattgccacccagagatactgt 106666
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>gb|AC022748.10| Homo sapiens chromosome 15, clone RP11-160C18, complete sequence
          Length = 163642

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 88679 tcccattgccacccagagatactgt 88703
to top
>gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, complete sequence
          Length = 167587

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 122782 tcccattgccacccagagatactgt 122806
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 592    taaatctgtcattttgctctc 612
              |||||||||||||||||||||
Sbjct: 848080 taaatctgtcattttgctctc 848060
to top
>gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, complete sequence
          Length = 137699

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 32503 tcccattgccacccagagatactgt 32479



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 111417 tcccattgccacccagagatactgt 111393
to top
>gb|AC080033.10| Homo sapiens chromosome 8, clone RP11-885J16, complete sequence
          Length = 141262

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1236   ttttagatcctatttgtattg 1256
              |||||||||||||||||||||
Sbjct: 119088 ttttagatcctatttgtattg 119068
to top
>gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, complete sequence
          Length = 155351

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 47250 tcccattgccacccagagatactgt 47274



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 126220 tcccattgccacccagagatactgt 126244
to top
>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence
          Length = 148698

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 72941 tcccattgccacccagagatactgt 72917
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>emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chromosome 6, complete
             sequence
          Length = 69009

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 21023 ccagtcttatgattcttgatt 21003
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>emb|BX323860.7| Human DNA sequence from clone RP11-552D4 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 142067

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 732    accagtggaaggggcagtgga 752
              |||||||||||||||||||||
Sbjct: 117763 accagtggaaggggcagtgga 117743
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>emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chromosome 6 Contains the
             AIF1 gene for allograft inflammatory factor 1, the BAT2
             genes for HLA-B associated transcript 2, the BAT3 gene for
             HLA-B associated transcript 3, the APOM gene for
             apolipoprotein M, the C6orf47 gene for chromosome 6 open
             reading frame 47, the BAT4 gene for HLA-B associated
             transcript 4, the CSNK2B gene for casein kinase 2, beta
             polypeptide, the LY6G5B gene for lymphocyte antigen 6
             complex, locus G5B, the bQB195H10.12 gene for a novel
             protein, the LY6G5C gene for lymphocyte antigen 6 complex,
             locus G5C, the BAT5 gene for HLA-B associated transcript
             5, the 5' end for LY6G6D gene for lymphocyte antigen 6
             complex, locus G6D and 7 CpG islands, complete sequence
          Length = 99109

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 29945 ccagtcttatgattcttgatt 29925
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>emb|BX248415.2| Human DNA sequence from clone RP11-109P13 on chromosome 1 Contains the
             5' end of the FHR-4 gene for the complement factor
             H-related protein 4, complete sequence
          Length = 69853

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 663   aaagggatgaccagagaaaaa 683
             |||||||||||||||||||||
Sbjct: 30826 aaagggatgaccagagaaaaa 30846
to top
>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a
              ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for
              HLA-B associated transcript 1, the ATP6V1G gene for ATPase,
              H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1
              gene for nuclear factor of kappa light polypeptide gene
              enhancer in B-cells inhibitor-like 1, the LTA gene for
              lymphotoxin alpha, the TNF gene for tumour necrosis factor,
              the LTB gene for lymphotoxin beta, the LST1 gene for
              leukocyte specific transcript 1, the LY117 gene for
              lymphocyte antigen 117, the AIF1 gene for alograft
              imflammatory factor 1, the BAT2 gene for HLA-B associated
              transcript 2, the BAT3 gene for HLA-B associated transcript
              3, the APOM gene for apolipoprotein M, the 3' end of the
              gene for chromosome 6, open reading frame 47 and four CpG
              islands, complete sequence
          Length = 132330

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1593   ccagtcttatgattcttgatt 1613
              |||||||||||||||||||||
Sbjct: 114144 ccagtcttatgattcttgatt 114124
to top
>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the
              gene for a novel protein similar to similar to
              peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal
              protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B
              associated transcript 1, the ATP6V1G gene for ATPase, H+
              transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1
              gene for nuclear factor of kappa light polypeptide gene
              enhancer in B-cells inhibitor-like 1, the LTA gene for
              lymphotoxin alpha, the TNF gene for tumour necrosis factor,
              the LTB gene for lymphotoxin beta, the LST1 gene for
              leukocyte specific transcript 1, the LY117 gene for
              lymphocyte antigen 117, the AIF1 gene for  alograft
              imflammatory factor 1, the BAT2 gene for HLA-B associated
              transcript 2, the 3' end of the BAT3 gene for HLA-B
              associated transcript 3 and two CpG islands, complete
              sequence
          Length = 135784

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1593   ccagtcttatgattcttgatt 1613
              |||||||||||||||||||||
Sbjct: 127910 ccagtcttatgattcttgatt 127890
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>gb|AC136704.9| Homo sapiens chromosome 15, clone RP11-671M22, complete sequence
          Length = 74342

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 42019 tcccattgccacccagagatactgt 42043
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>gb|AF338108.1|AF338108 Cowdria ruminantium clone 11hw hypothetical iron-sulfur cofactor
            synthesis protein 1, hypothetical iron-sulfur cofactor
            synthesis protein 2, and NIFU-like protein genes,
            complete cds
          Length = 4122

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1857 gaagcagcatatatagctcag 1877
            |||||||||||||||||||||
Sbjct: 2882 gaagcagcatatatagctcag 2902
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1857   gaagcagcatatatagctcag 1877
              |||||||||||||||||||||
Sbjct: 702270 gaagcagcatatatagctcag 702290
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1857   gaagcagcatatatagctcag 1877
              |||||||||||||||||||||
Sbjct: 697899 gaagcagcatatatagctcag 697919
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1857   gaagcagcatatatagctcag 1877
              |||||||||||||||||||||
Sbjct: 722423 gaagcagcatatatagctcag 722443
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>emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chromosome 6, complete
             sequence
          Length = 83849

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 29938 ccagtcttatgattcttgatt 29918
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>emb|CR936812.1| Homo sapiens mRNA; cDNA DKFZp686C168 (from clone DKFZp686C168)
          Length = 6557

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 245 tcccattcccacccagagatactgt 269
           ||||||| |||||||||||||||||
Sbjct: 955 tcccattgccacccagagatactgt 931
to top
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence
          Length = 157200

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 37590 tcccattgccacccagagatactgt 37614



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 127423 tcccattgccacccagagatactgt 127447
to top
>gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, complete sequence
          Length = 95499

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 58533 tcccattgccacccagagatactgt 58557
to top
>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence
          Length = 189557

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 21224 tcccattgccacccagagatactgt 21248
to top
>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete
             sequence
          Length = 101422

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 98355 ccagtcttatgattcttgatt 98335
to top
>gb|AC146099.3| Pan troglodytes BAC clone RP43-5L2 from chromosome 7, complete sequence
          Length = 196770

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 195716 tcccattgccacccagagatactgt 195692
to top
>gb|AC010931.17| Homo sapiens chromosome 15, clone RP11-247C2, complete sequence
          Length = 93600

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 90996 tcccattaccacccagagatactgt 90972
to top
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1593   ccagtcttatgattcttgatt 1613
              |||||||||||||||||||||
Sbjct: 302554 ccagtcttatgattcttgatt 302574
to top
>gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, complete sequence
          Length = 132528

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 78689 tcccattgccacccagagatactgt 78713
to top
>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence
          Length = 177769

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 119344 tcccattgccacccagagatactgt 119320
to top
>gb|AC068338.14| Homo sapiens chromosome 15, clone RP11-817O13, complete sequence
          Length = 174192

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 91939 tcccattaccacccagagatactgt 91963



 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 116216 tcccattaccacccagagatactgt 116240
to top
>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence
          Length = 169605

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 245    tcccattcccacccagagatactgt 269
              ||||||| |||||||||||||||||
Sbjct: 136293 tcccattgccacccagagatactgt 136269
to top
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470F10
          Length = 185294

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 592   taaatctgtcattttgctctc 612
             |||||||||||||||||||||
Sbjct: 10818 taaatctgtcattttgctctc 10798
to top
>gb|AC104758.12| Homo sapiens chromosome 15, clone RP11-114H24, complete sequence
          Length = 175763

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   tcccattcccacccagagatactgt 269
             ||||||| |||||||||||||||||
Sbjct: 71974 tcccattaccacccagagatactgt 71998
to top
>dbj|AP000368.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6B6
          Length = 37511

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1219  atttagtccaatcaagtttttagat 1243
             |||||||| ||||||||||||||||
Sbjct: 33057 atttagtcaaatcaagtttttagat 33033
to top
>gb|AC013486.12| Homo sapiens chromosome 15, clone RP11-2M12, complete sequence
          Length = 162060

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 245  tcccattcccacccagagatactgt 269
            ||||||| |||||||||||||||||
Sbjct: 3253 tcccattaccacccagagatactgt 3229
to top
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0427G12
          Length = 185545

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 592    taaatctgtcattttgctctc 612
              |||||||||||||||||||||
Sbjct: 147300 taaatctgtcattttgctctc 147280
to top
>gb|AC087856.6| Homo sapiens chromosome 8, clone RP11-4K16, complete sequence
          Length = 169060

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1236   ttttagatcctatttgtattg 1256
              |||||||||||||||||||||
Sbjct: 151453 ttttagatcctatttgtattg 151473
to top
>emb|CR354443.4| Human DNA sequence from clone DAMA-236L13 on chromosome 6, complete
             sequence
          Length = 132551

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1593  ccagtcttatgattcttgatt 1613
             |||||||||||||||||||||
Sbjct: 22577 ccagtcttatgattcttgatt 22557
to top
>gb|AF266285.1|AF266285 Homo sapiens golgin-like protein (GLP) gene, complete cds
          Length = 21500

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 245  tcccattcccacccagagatactgt 269
            ||||||| |||||||||||||||||
Sbjct: 7224 tcccattaccacccagagatactgt 7200
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 270     tcgcgatcttcgagcccgacg 290
               |||||||||||||||||||||
Sbjct: 2514061 tcgcgatcttcgagcccgacg 2514041
to top
>gb|AC009514.2|AC009514 Homo sapiens chromosome 8 clone RP11-4K16, complete sequence
          Length = 169059

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1236   ttttagatcctatttgtattg 1256
              |||||||||||||||||||||
Sbjct: 151452 ttttagatcctatttgtattg 151472
to top
>emb|AL953852.6| Zebrafish DNA sequence from clone CH211-213C6 in linkage group 6,
             complete sequence
          Length = 200882

 Score = 42.1 bits (21), Expect = 7.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1434  attttgatcaagaaaagaaat 1454
             |||||||||||||||||||||
Sbjct: 56686 attttgatcaagaaaagaaat 56706


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 336,568,334
Number of extensions: 18507086
Number of successful extensions: 333488
Number of sequences better than 10.0: 78
Number of HSP's gapped: 333488
Number of HSP's successfully gapped: 86
Length of query: 1901
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1878
Effective length of database: 18,503,978,556
Effective search space: 34750471728168
Effective search space used: 34750471728168
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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