ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf109j09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK121577:Os04g0310500 30 0.98
2AK063780:Os04g0310500 30 0.98
3Os05g0491700:Os05g0491700 30 1.7
4Os09g0547900:Os09g0547900 29 2.2
5AK102436:Os06g0623300 28 3.7
6Os08g0447600:Os08g0447600 28 4.8
7AK121249:Os04g0310500 28 6.3
8AK105790:Os06g0224900 28 6.3
9AK071365:Os05g0350700 28 6.3
10AK065678:Os06g0224900 28 6.3
11AK121397:Os06g0286500 27 8.3

>AK121577:Os04g0310500 |
          Length = 99
 Score = 30.4 bits (67), Expect = 0.98
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +3

Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVYK 320
           RGV +++ L   +C    +S   R F++ +   +K +NP L V+ +   G  P L   Y 
Sbjct: 9   RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARYD 65

Query: 321 NHNERVVCVR 350
              ER  CVR
Sbjct: 66  MGVER--CVR 73



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>AK063780:Os04g0310500 |
          Length = 99

 Score = 30.4 bits (67), Expect = 0.98
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +3

Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVYK 320
           RGV +++ L   +C    +S   R F++ +   +K +NP L V+ +   G  P L   Y 
Sbjct: 9   RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARYD 65

Query: 321 NHNERVVCVR 350
              ER  CVR
Sbjct: 66  MGVER--CVR 73



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>Os05g0491700:Os05g0491700 |
          Length = 286

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = -3

Query: 111 RRRASAWVGRRKCGRREGMAAESGLWGWRT 22
           RR  + W GRR  G   GMAA  G  GWRT
Sbjct: 233 RRPGTGWGGRRPAGGG-GMAAGHGPAGWRT 261



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>Os09g0547900:Os09g0547900 |
          Length = 1229

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -2

Query: 586  LTKGRSNSSRVLAIDLKQFNRNTATVCLGTLTHIFSSVV-HVPW-TLGRFVTCL 431
            L  GR+ +S ++AI L+  ++   +VC+G++  +  +   H  W TLG F T L
Sbjct: 978  LQAGRNFASEIMAIILRSLDKFENSVCVGSMRIVLDAPCRHCVWYTLGLFGTRL 1031



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>AK102436:Os06g0623300 |
          Length = 321

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 225 SHLPALKEKNPQLEVVTQLVRGQHPNLKGVYKNHNERVVCVRNLA 359
           S +P+ +  NP++EV+   V G    LK  ++   +RVV V ++A
Sbjct: 88  SPVPSGRSTNPEVEVIAPAVTGTLNVLKACHEAKVKRVVMVSSIA 132



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>Os08g0447600:Os08g0447600 |
          Length = 168

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 111 RRRASAWVGRRKCGRREGMAAESGLWGWR 25
           RRR  A   RR+ GRR      SG  GWR
Sbjct: 111 RRRGRAASRRRRRGRRRARVGRSGGGGWR 139



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>AK121249:Os04g0310500 |
          Length = 100

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVY 317
           RGV +++ L   +C    +S   R F++ +   +K +NP L V+ +   G  P L   Y
Sbjct: 9   RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARY 64



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>AK105790:Os06g0224900 |
          Length = 378

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = +3

Query: 417 VKLRTRHVTKRPSVQGTWTTELKM*VKVPRQTVAVFLLNCLRSMARTLLLLDLPFVSSYS 596
           VKL TR++ +RP +  +++ E ++   +PR  +  FL       A+ LL  +L F S+ +
Sbjct: 295 VKLETRYIARRP-IMISYSLERRL---LPRHRLLRFL------SAKGLLDGELDFYSAVA 344

Query: 597 LIQKK 611
           L +KK
Sbjct: 345 LTEKK 349



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>AK071365:Os05g0350700 |
          Length = 1251

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +2

Query: 323 P*RESGLCQKFSTRGHHVAGQ*AKVFSGQESGEAENETRDETA*CPGDMDDG 478
           P R S  C + + RG H     ++   G ESG AE + RD++    G++DDG
Sbjct: 502 PRRASINCSQQTRRGDHGLSTGSE---GDESGVAEKKLRDKSK-RAGELDDG 549



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>AK065678:Os06g0224900 |
          Length = 392

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 21/65 (32%), Positives = 37/65 (56%)
 Frame = +3

Query: 417 VKLRTRHVTKRPSVQGTWTTELKM*VKVPRQTVAVFLLNCLRSMARTLLLLDLPFVSSYS 596
           VKL TR++ +RP +  +++ E ++   +PR  +  FL       A+ LL  +L F S+ +
Sbjct: 309 VKLETRYIARRP-IMISYSLERRL---LPRHRLLRFL------SAKGLLDGELDFYSAVA 358

Query: 597 LIQKK 611
           L +KK
Sbjct: 359 LTEKK 363



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>AK121397:Os06g0286500 |
          Length = 974

 Score = 27.3 bits (59), Expect = 8.3
 Identities = 21/88 (23%), Positives = 40/88 (45%)
 Frame = +3

Query: 129 VMALRGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLK 308
           ++ + G+   +K++    +WG   R         LP+  E NP LE + ++V   + +L 
Sbjct: 380 ILTIGGILATKKIM----EWGKFYR--------ELPSELESNPSLEAMRRMVTLSYNHL- 426

Query: 309 GVYKNHNERVVCVRNLAPEDIMLQASRL 392
               +H +      ++ PED  +Q  RL
Sbjct: 427 ---PSHLKPCFLYLSIFPEDFEIQRGRL 451


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,628,187
Number of extensions: 350872
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1012
Number of HSP's successfully gapped: 11
Length of query: 205
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 109
Effective length of database: 11,555,919
Effective search space: 1259595171
Effective search space used: 1259595171
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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