| Clone Name | FLbaf109j09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK121577:Os04g0310500 | 30 | 0.98 | 2 | AK063780:Os04g0310500 | 30 | 0.98 | 3 | Os05g0491700:Os05g0491700 | 30 | 1.7 | 4 | Os09g0547900:Os09g0547900 | 29 | 2.2 | 5 | AK102436:Os06g0623300 | 28 | 3.7 | 6 | Os08g0447600:Os08g0447600 | 28 | 4.8 | 7 | AK121249:Os04g0310500 | 28 | 6.3 | 8 | AK105790:Os06g0224900 | 28 | 6.3 | 9 | AK071365:Os05g0350700 | 28 | 6.3 | 10 | AK065678:Os06g0224900 | 28 | 6.3 | 11 | AK121397:Os06g0286500 | 27 | 8.3 |
|---|
>AK121577:Os04g0310500 | Length = 99 Score = 30.4 bits (67), Expect = 0.98 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVYK 320 RGV +++ L +C +S R F++ + +K +NP L V+ + G P L Y Sbjct: 9 RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARYD 65 Query: 321 NHNERVVCVR 350 ER CVR Sbjct: 66 MGVER--CVR 73
>AK063780:Os04g0310500 | Length = 99 Score = 30.4 bits (67), Expect = 0.98 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVYK 320 RGV +++ L +C +S R F++ + +K +NP L V+ + G P L Y Sbjct: 9 RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARYD 65 Query: 321 NHNERVVCVR 350 ER CVR Sbjct: 66 MGVER--CVR 73
>Os05g0491700:Os05g0491700 | Length = 286 Score = 29.6 bits (65), Expect = 1.7 Identities = 16/30 (53%), Positives = 17/30 (56%) Frame = -3 Query: 111 RRRASAWVGRRKCGRREGMAAESGLWGWRT 22 RR + W GRR G GMAA G GWRT Sbjct: 233 RRPGTGWGGRRPAGGG-GMAAGHGPAGWRT 261
>Os09g0547900:Os09g0547900 | Length = 1229 Score = 29.3 bits (64), Expect = 2.2 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Frame = -2 Query: 586 LTKGRSNSSRVLAIDLKQFNRNTATVCLGTLTHIFSSVV-HVPW-TLGRFVTCL 431 L GR+ +S ++AI L+ ++ +VC+G++ + + H W TLG F T L Sbjct: 978 LQAGRNFASEIMAIILRSLDKFENSVCVGSMRIVLDAPCRHCVWYTLGLFGTRL 1031
>AK102436:Os06g0623300 | Length = 321 Score = 28.5 bits (62), Expect = 3.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +3 Query: 225 SHLPALKEKNPQLEVVTQLVRGQHPNLKGVYKNHNERVVCVRNLA 359 S +P+ + NP++EV+ V G LK ++ +RVV V ++A Sbjct: 88 SPVPSGRSTNPEVEVIAPAVTGTLNVLKACHEAKVKRVVMVSSIA 132
>Os08g0447600:Os08g0447600 | Length = 168 Score = 28.1 bits (61), Expect = 4.8 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 111 RRRASAWVGRRKCGRREGMAAESGLWGWR 25 RRR A RR+ GRR SG GWR Sbjct: 111 RRRGRAASRRRRRGRRRARVGRSGGGGWR 139
>AK121249:Os04g0310500 | Length = 100 Score = 27.7 bits (60), Expect = 6.3 Identities = 17/59 (28%), Positives = 29/59 (49%) Frame = +3 Query: 141 RGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLKGVY 317 RGV +++ L +C +S R F++ + +K +NP L V+ + G P L Y Sbjct: 9 RGVKEIRFL---FCQSSPASAPAREFVKKNYGDIKARNPSLPVLIRECSGVEPQLWARY 64
>AK105790:Os06g0224900 | Length = 378 Score = 27.7 bits (60), Expect = 6.3 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +3 Query: 417 VKLRTRHVTKRPSVQGTWTTELKM*VKVPRQTVAVFLLNCLRSMARTLLLLDLPFVSSYS 596 VKL TR++ +RP + +++ E ++ +PR + FL A+ LL +L F S+ + Sbjct: 295 VKLETRYIARRP-IMISYSLERRL---LPRHRLLRFL------SAKGLLDGELDFYSAVA 344 Query: 597 LIQKK 611 L +KK Sbjct: 345 LTEKK 349
>AK071365:Os05g0350700 | Length = 1251 Score = 27.7 bits (60), Expect = 6.3 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = +2 Query: 323 P*RESGLCQKFSTRGHHVAGQ*AKVFSGQESGEAENETRDETA*CPGDMDDG 478 P R S C + + RG H ++ G ESG AE + RD++ G++DDG Sbjct: 502 PRRASINCSQQTRRGDHGLSTGSE---GDESGVAEKKLRDKSK-RAGELDDG 549
>AK065678:Os06g0224900 | Length = 392 Score = 27.7 bits (60), Expect = 6.3 Identities = 21/65 (32%), Positives = 37/65 (56%) Frame = +3 Query: 417 VKLRTRHVTKRPSVQGTWTTELKM*VKVPRQTVAVFLLNCLRSMARTLLLLDLPFVSSYS 596 VKL TR++ +RP + +++ E ++ +PR + FL A+ LL +L F S+ + Sbjct: 309 VKLETRYIARRP-IMISYSLERRL---LPRHRLLRFL------SAKGLLDGELDFYSAVA 358 Query: 597 LIQKK 611 L +KK Sbjct: 359 LTEKK 363
>AK121397:Os06g0286500 | Length = 974 Score = 27.3 bits (59), Expect = 8.3 Identities = 21/88 (23%), Positives = 40/88 (45%) Frame = +3 Query: 129 VMALRGVWQLQKLVVNYCDWGGSSRGIRAFMESHLPALKEKNPQLEVVTQLVRGQHPNLK 308 ++ + G+ +K++ +WG R LP+ E NP LE + ++V + +L Sbjct: 380 ILTIGGILATKKIM----EWGKFYR--------ELPSELESNPSLEAMRRMVTLSYNHL- 426 Query: 309 GVYKNHNERVVCVRNLAPEDIMLQASRL 392 +H + ++ PED +Q RL Sbjct: 427 ---PSHLKPCFLYLSIFPEDFEIQRGRL 451 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,628,187 Number of extensions: 350872 Number of successful extensions: 1012 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1012 Number of HSP's successfully gapped: 11 Length of query: 205 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 109 Effective length of database: 11,555,919 Effective search space: 1259595171 Effective search space used: 1259595171 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)