ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf106o11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Y10118:Os04g0623700 182 2e-46
2AK071587:Os04g0623700 182 2e-46
3AK101412:Os09g0318600 31 1.4
4AK109119: 29 4.2 
>Y10118:Os04g0623700 |
          Length = 132
 Score =  182 bits (463), Expect = 2e-46
 Identities = 89/106 (83%), Positives = 99/106 (93%)
 Frame = +1

Query: 193 MVLMQADPFLSELTNMYERTTEKGSVWVTMKRSSMKCKARLKKMADKGELVEYRCLVRAS 372
           MV++Q DPFLSELT+MYER+TEKGSVWVTMKRSSMKC+ARLKKMA KGE VEYRCLVRA+
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 373 DGKRNISTSLSAKEYLKFQASYSLVLKAHMHALKKRERKDRKKTVE 510
           DGK+NI T+LSAKEYLKFQASY+ VLKAHMHALKKRERKD+KK  E
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAE 106
to top
>AK071587:Os04g0623700 |
          Length = 132

 Score =  182 bits (463), Expect = 2e-46
 Identities = 89/106 (83%), Positives = 99/106 (93%)
 Frame = +1

Query: 193 MVLMQADPFLSELTNMYERTTEKGSVWVTMKRSSMKCKARLKKMADKGELVEYRCLVRAS 372
           MV++Q DPFLSELT+MYER+TEKGSVWVTMKRSSMKC+ARLKKMA KGE VEYRCLVRA+
Sbjct: 1   MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRAT 60

Query: 373 DGKRNISTSLSAKEYLKFQASYSLVLKAHMHALKKRERKDRKKTVE 510
           DGK+NI T+LSAKEYLKFQASY+ VLKAHMHALKKRERKD+KK  E
Sbjct: 61  DGKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAE 106
to top
>AK101412:Os09g0318600 |
          Length = 527

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
 Frame = -1

Query: 467 ACMWALRTREYEAWNFRYSFADSE--------VEMFLLPSEARTRHRYSTSSPLSAIFFN 312
           +C++  RT + ++W +  S  DSE         E+ +   EA+ +   S+S     +   
Sbjct: 251 SCLFTKRTMQSDSWEYMSSSEDSEEMPGKEIGEEVCMTSKEAKVKRSTSSSEMQEDM--- 307

Query: 311 LALHFIEDRFMVTQTEPFSVVRSYMLVSSLRNGSAC 204
                I++   +T+ EP S+    +L++SL+   AC
Sbjct: 308 ----LIKNPEELTEVEP-SISNEKLLLASLKQQDAC 338
to top
>AK109119: |
          Length = 940

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 384 PLAIGGTDQAPVLHQLPLVRHLLQ-PSLALHRGSLHGDPDGALLRGPLVHVGQLAQE 217
           PL+ G TD++ +   + ++RH  + P   LH  ++H D  G  +    V V + AQE
Sbjct: 483 PLSPGTTDRSWLSLPMAIIRHEFRDPHRFLHAAAMHADMHGLPVPKVSVAVNRAAQE 539


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,831,164
Number of extensions: 494382
Number of successful extensions: 1613
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1613
Number of HSP's successfully gapped: 4
Length of query: 314
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 213
Effective length of database: 11,355,714
Effective search space: 2418767082
Effective search space used: 2418767082
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top