ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf106n06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063218:Os02g0191800 127 7e-30
2AK107791:Os06g0633100 97 1e-20
3Os08g0446800:Os08g0446800 51 9e-07
4AK121532:Os04g0529700 30 2.0
5Os07g0567000:Os07g0567000 28 5.9
6AK072487:Os10g0564200 28 5.9
7AK119742: 28 7.8
8AK109157: 28 7.8
9AK119924:Os04g0211900 28 7.8

>AK063218:Os02g0191800 |
          Length = 148
 Score =  127 bits (319), Expect = 7e-30
 Identities = 76/125 (60%), Positives = 83/125 (66%), Gaps = 15/125 (12%)
 Frame = +3

Query: 87  AAVDAQMNAGGASSSPTMIP--------PPFWSTPTPYLFIGFAVVMSLIAVALAVLLCS 242
           AA  A    GGA++S + +P        PPFWSTPTPYLFIGF VVM+LIAVALAVLLC+
Sbjct: 6   AADMAMGGIGGAAASTSSVPAMPAAVAPPPFWSTPTPYLFIGFGVVMALIAVALAVLLCT 65

Query: 243 ------XXXXXXXXXXXAVPAGMMSVRVLTPLDREV-PKVVVVMAGDDMPSFLASATPLD 401
                             VP GMMSVRVL PLDRE  P+VVVVMAGDD PSFLASATPL 
Sbjct: 66  RRKDGGRGVGGEERGDVVVPPGMMSVRVLAPLDREAPPRVVVVMAGDDSPSFLASATPLA 125

Query: 402 FAEAA 416
           FA AA
Sbjct: 126 FAAAA 130



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>AK107791:Os06g0633100 |
          Length = 128

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 58/104 (55%), Positives = 65/104 (62%)
 Frame = +3

Query: 87  AAVDAQMNAGGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLLCSXXXXXXXX 266
           AA  +   AGG    P M     W TPTPYLF+GFAV+M LIAVAL VL+C+        
Sbjct: 16  AATSSSAAAGGGGGHPGM-----WRTPTPYLFLGFAVMMGLIAVALLVLVCTRRKNHGDA 70

Query: 267 XXXAVPAGMMSVRVLTPLDREVPKVVVVMAGDDMPSFLASATPL 398
              A  A   SV+VL PLDRE PKVVV+MAGD  PSFLASA PL
Sbjct: 71  GSSASAAA--SVKVLVPLDRE-PKVVVIMAGDTAPSFLASAKPL 111



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>Os08g0446800:Os08g0446800 |
          Length = 180

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
 Frame = +3

Query: 87  AAVDAQMNAGGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLLCSXXXXXXXX 266
           AAV A + AGGA++         W +P PYLF G A ++ LIA AL +L CS        
Sbjct: 17  AAVVAPVAAGGAAAHSA------WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 70

Query: 267 XXXA-----VPAGMMSVRVLTPLDREVP------KVVVVMAGDDMPSFLASATPLDFAEA 413
              A        G        P   E+P      K++V+MAGD  P++L  ATP+    +
Sbjct: 71  EGGAGGRGGNDDGGAPADGAKPAASELPPPIWEEKILVIMAGDVKPTYL--ATPMSSRAS 128

Query: 414 AKVQRS 431
           +   RS
Sbjct: 129 SFGDRS 134



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>AK121532:Os04g0529700 |
          Length = 464

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 87  AAVDAQMNA-GGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLL 236
           A V  + NA   A   PTM PPP    P P L +  ++   L+ ++L  LL
Sbjct: 2   APVATKANAMAPAPPPPTMAPPPTPRKPLPLLLLSLSLPFLLLLLSLVFLL 52



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>Os07g0567000:Os07g0567000 |
          Length = 500

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 129 SPTMIPPPFWSTPTPYLFIGFAVVMSLIAVA 221
           SP ++PPP  S P P   + F +  SL+++A
Sbjct: 14  SPILVPPPPASPPPPPRLLAFLLPRSLLSLA 44



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>AK072487:Os10g0564200 |
          Length = 336

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 87  AAVDAQMNAGGASSSPTMIPPPFWS 161
           AA  A +++GGA  S   +PPP W+
Sbjct: 30  AAAAAAVSSGGAGGSGRRLPPPCWT 54



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>AK119742: |
          Length = 994

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 303 RVLTPLDREVPKVVVVMAGDDMPSFLA 383
           RVL  +DRE PK VVV  G  +P  +A
Sbjct: 777 RVLDIVDRENPKGVVVSVGGQLPQNIA 803



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>AK109157: |
          Length = 218

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = -3

Query: 493 GERATVSYTAAATSLAPHWQYDLCTLAASAKSSGVALARKDGMSSPA 353
           G  ATV  +AAAT   P ++ D    A  A ++GVA  R+ G+S PA
Sbjct: 5   GRLATVDSSAAATR-KPGYRPD----AMGAGAAGVARGRRRGLSVPA 46



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>AK119924:Os04g0211900 |
          Length = 428

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 96  DAQMNAGGASSSPTMIPPPF-WS-TPTPYLFIGFAVVMSLIAVALAVLL 236
           DA     G    P   PP F W  TPT Y+F     V S +AVA  +LL
Sbjct: 172 DASDRLVGCEWRPLPRPPFFPWDLTPTDYIFPPVVTVKSHVAVASYILL 220


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,040,747
Number of extensions: 313538
Number of successful extensions: 1152
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1146
Number of HSP's successfully gapped: 9
Length of query: 232
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 135
Effective length of database: 11,515,878
Effective search space: 1554643530
Effective search space used: 1554643530
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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