| Clone Name | FLbaf106n06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063218:Os02g0191800 | 127 | 7e-30 | 2 | AK107791:Os06g0633100 | 97 | 1e-20 | 3 | Os08g0446800:Os08g0446800 | 51 | 9e-07 | 4 | AK121532:Os04g0529700 | 30 | 2.0 | 5 | Os07g0567000:Os07g0567000 | 28 | 5.9 | 6 | AK072487:Os10g0564200 | 28 | 5.9 | 7 | AK119742: | 28 | 7.8 | 8 | AK109157: | 28 | 7.8 | 9 | AK119924:Os04g0211900 | 28 | 7.8 |
|---|
>AK063218:Os02g0191800 | Length = 148 Score = 127 bits (319), Expect = 7e-30 Identities = 76/125 (60%), Positives = 83/125 (66%), Gaps = 15/125 (12%) Frame = +3 Query: 87 AAVDAQMNAGGASSSPTMIP--------PPFWSTPTPYLFIGFAVVMSLIAVALAVLLCS 242 AA A GGA++S + +P PPFWSTPTPYLFIGF VVM+LIAVALAVLLC+ Sbjct: 6 AADMAMGGIGGAAASTSSVPAMPAAVAPPPFWSTPTPYLFIGFGVVMALIAVALAVLLCT 65 Query: 243 ------XXXXXXXXXXXAVPAGMMSVRVLTPLDREV-PKVVVVMAGDDMPSFLASATPLD 401 VP GMMSVRVL PLDRE P+VVVVMAGDD PSFLASATPL Sbjct: 66 RRKDGGRGVGGEERGDVVVPPGMMSVRVLAPLDREAPPRVVVVMAGDDSPSFLASATPLA 125 Query: 402 FAEAA 416 FA AA Sbjct: 126 FAAAA 130
>AK107791:Os06g0633100 | Length = 128 Score = 96.7 bits (239), Expect = 1e-20 Identities = 58/104 (55%), Positives = 65/104 (62%) Frame = +3 Query: 87 AAVDAQMNAGGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLLCSXXXXXXXX 266 AA + AGG P M W TPTPYLF+GFAV+M LIAVAL VL+C+ Sbjct: 16 AATSSSAAAGGGGGHPGM-----WRTPTPYLFLGFAVMMGLIAVALLVLVCTRRKNHGDA 70 Query: 267 XXXAVPAGMMSVRVLTPLDREVPKVVVVMAGDDMPSFLASATPL 398 A A SV+VL PLDRE PKVVV+MAGD PSFLASA PL Sbjct: 71 GSSASAAA--SVKVLVPLDRE-PKVVVIMAGDTAPSFLASAKPL 111
>Os08g0446800:Os08g0446800 | Length = 180 Score = 50.8 bits (120), Expect = 9e-07 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 11/126 (8%) Frame = +3 Query: 87 AAVDAQMNAGGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLLCSXXXXXXXX 266 AAV A + AGGA++ W +P PYLF G A ++ LIA AL +L CS Sbjct: 17 AAVVAPVAAGGAAAHSA------WHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 70 Query: 267 XXXA-----VPAGMMSVRVLTPLDREVP------KVVVVMAGDDMPSFLASATPLDFAEA 413 A G P E+P K++V+MAGD P++L ATP+ + Sbjct: 71 EGGAGGRGGNDDGGAPADGAKPAASELPPPIWEEKILVIMAGDVKPTYL--ATPMSSRAS 128 Query: 414 AKVQRS 431 + RS Sbjct: 129 SFGDRS 134
>AK121532:Os04g0529700 | Length = 464 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +3 Query: 87 AAVDAQMNA-GGASSSPTMIPPPFWSTPTPYLFIGFAVVMSLIAVALAVLL 236 A V + NA A PTM PPP P P L + ++ L+ ++L LL Sbjct: 2 APVATKANAMAPAPPPPTMAPPPTPRKPLPLLLLSLSLPFLLLLLSLVFLL 52
>Os07g0567000:Os07g0567000 | Length = 500 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 129 SPTMIPPPFWSTPTPYLFIGFAVVMSLIAVA 221 SP ++PPP S P P + F + SL+++A Sbjct: 14 SPILVPPPPASPPPPPRLLAFLLPRSLLSLA 44
>AK072487:Os10g0564200 | Length = 336 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 87 AAVDAQMNAGGASSSPTMIPPPFWS 161 AA A +++GGA S +PPP W+ Sbjct: 30 AAAAAAVSSGGAGGSGRRLPPPCWT 54
>AK119742: | Length = 994 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 303 RVLTPLDREVPKVVVVMAGDDMPSFLA 383 RVL +DRE PK VVV G +P +A Sbjct: 777 RVLDIVDRENPKGVVVSVGGQLPQNIA 803
>AK109157: | Length = 218 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = -3 Query: 493 GERATVSYTAAATSLAPHWQYDLCTLAASAKSSGVALARKDGMSSPA 353 G ATV +AAAT P ++ D A A ++GVA R+ G+S PA Sbjct: 5 GRLATVDSSAAATR-KPGYRPD----AMGAGAAGVARGRRRGLSVPA 46
>AK119924:Os04g0211900 | Length = 428 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +3 Query: 96 DAQMNAGGASSSPTMIPPPF-WS-TPTPYLFIGFAVVMSLIAVALAVLL 236 DA G P PP F W TPT Y+F V S +AVA +LL Sbjct: 172 DASDRLVGCEWRPLPRPPFFPWDLTPTDYIFPPVVTVKSHVAVASYILL 220 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,040,747 Number of extensions: 313538 Number of successful extensions: 1152 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1146 Number of HSP's successfully gapped: 9 Length of query: 232 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 135 Effective length of database: 11,515,878 Effective search space: 1554643530 Effective search space used: 1554643530 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)