ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf109h21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9UUI5:YIY8_SCHPO Uncharacterized protein C22F8.08 - Schizosacch... 36 0.48
2P36304:POLR_KYMVJ RNA replicase polyprotein - Kennedya yellow mo... 36 0.48
3Q8VI59:PCX3_MOUSE Pecanex-like protein 3 - Mus musculus (Mouse) 33 3.1
4O43516:WIPF1_HUMAN WAS/WASL-interacting protein family member 1 ... 33 5.3
5Q9GIH9:MATK_LILHE Maturase K - Lilium henryi (Henry's lily) 33 5.3

>Q9UUI5:YIY8_SCHPO Uncharacterized protein C22F8.08 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 926
 Score = 36.2 bits (82), Expect = 0.48
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 18/78 (23%)
 Frame = -2

Query: 1318 QVIYGKFLFTMKLDDIFRCSCFPRENFGKT-------ISRISWSLNFARVIVQ------- 1181
            QV    FLF+ +  D+   SC PR   GKT        SR   +L FA  +         
Sbjct: 512  QVSVDMFLFSSQYQDVATLSCLPRYTSGKTQFYHRWNASRSEDALKFASELTNYLSMEIE 571

Query: 1180 ----VRVRGNNGLTVPNF 1139
                +RVRG+NGL + +F
Sbjct: 572  LEAVMRVRGSNGLRMSSF 589



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>P36304:POLR_KYMVJ RNA replicase polyprotein - Kennedya yellow mosaic virus (strain|
           Jervis bay) (KYMV)
          Length = 1874

 Score = 36.2 bits (82), Expect = 0.48
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
 Frame = +2

Query: 200 PNDRVFVRVDNNAYTIPGFGDDEDPSLSPTAAAADQLPSSTSGPLPDHVRQQILELGLPD 379
           P+ ++ VR      ++P F    DP    T   + Q+P S   P    + Q +    +P+
Sbjct: 254 PDPKLLVR------SLPPFSRSPDPE---TDLVSFQVPKSVELPQATFLSQPLRHRLVPE 304

Query: 380 DGYNYLF-HLRELRPSAV--PSSFVPNHTTRPEHVPLDVKAYD 499
             YN LF + R +R   V  P+ FV   + +PEH  +   A+D
Sbjct: 305 SVYNALFTYTRAVRTLRVSDPAGFVRTQSNKPEHKWVTPSAWD 347



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>Q8VI59:PCX3_MOUSE Pecanex-like protein 3 - Mus musculus (Mouse)|
          Length = 1620

 Score = 33.5 bits (75), Expect = 3.1
 Identities = 23/51 (45%), Positives = 23/51 (45%)
 Frame = -1

Query: 617  GRRPSRLASLVPSLRPPYTWSSPRPTLPRPCQKQPAPCLHHRPSRPGERAL 465
            G RPS   S     RPP     P P LP P    PAP    RPSRP   AL
Sbjct: 1470 GPRPSLSGS--GDGRPPPLLQWPPPRLPGPPPASPAPTEGPRPSRPSGPAL 1518



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>O43516:WIPF1_HUMAN WAS/WASL-interacting protein family member 1 - Homo sapiens (Human)|
          Length = 503

 Score = 32.7 bits (73), Expect = 5.3
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = -1

Query: 617 GRRPSRLASLVPSLRPPYTWSSPRPTLPRPCQKQPAPCLHHRPSRPG 477
           G RPS     VP   PP     P P+ PRP     AP     PSRPG
Sbjct: 272 GNRPSIHREAVPP-PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPG 317



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>Q9GIH9:MATK_LILHE Maturase K - Lilium henryi (Henry's lily)|
          Length = 512

 Score = 32.7 bits (73), Expect = 5.3
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -1

Query: 1142 LQIHHCFLKQARPLHLPHFHLNTFQHIQHTSGSH*QIHPPPQRWLSQVFHEQNLLAFYIL 963
            +QI  C+++    LHL  F L+ +Q++  T  S+  I+         VF ++N   F+ L
Sbjct: 168  VQILQCWIQDVPSLHLLRFFLHKYQNLNKTIQSNKTIY---------VFSKENKRLFWFL 218

Query: 962  HQRIHFDC 939
            H     +C
Sbjct: 219  HNSYVSEC 226


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 249,883,363
Number of extensions: 5157428
Number of successful extensions: 16484
Number of sequences better than 10.0: 5
Number of HSP's gapped: 16411
Number of HSP's successfully gapped: 5
Length of query: 617
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 498
Effective length of database: 68,045,334
Effective search space: 33886576332
Effective search space used: 33886576332
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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