ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf106m14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os08g37990:12008.t03535:unspliced-genomic expressed protein| Length = 909 Score = 74.4 bits (156), Expect(5) = 1e-28 Identities = 27/39 (69%), Positives = 28/39 (71%) Frame = -1 / -1 Query: 510 CGYHHRRFAWGRPGTLSTQTHCCCSPRRHPQ*CGRIPWQ 394 C HRR AW R GTLST+T CCCSPR HPQ* G PWQ Sbjct: 261 CRRRHRRRAWERQGTLSTRTRCCCSPRHHPQ*YGMTPWQ 145 Score = 35.4 bits (71), Expect(5) = 1e-28 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = -2 / -2 Query: 1139 NNRRLQ*IYMAATVN 1095 NNRRLQ*IYMAATVN Sbjct: 860 NNRRLQ*IYMAATVN 816 Score = 33.6 bits (67), Expect(5) = 1e-28 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 / -1 Query: 684 RQATRAAP*PWLTQSKHRRQGSHCHRHRPGIPCP 583 R+ R AP W + KHRR+G+ RHR + P Sbjct: 432 RRPVRKAPSLWPDRLKHRRRGNRRRRHRRRLHTP 331 Score = 32.7 bits (65), Expect(5) = 1e-28 Identities = 12/16 (75%), Positives = 15/16 (93%) Frame = -3 / -3 Query: 811 ALLPAFLRELVENLVC 764 ++LPAFL EL+ENLVC Sbjct: 565 SVLPAFLPELIENLVC 518 Score = 30.9 bits (61), Expect(5) = 1e-28 Identities = 11/15 (73%), Positives = 14/15 (93%) Frame = -1 / -3 Query: 1056 NTMEGKTEDPKKAFL 1012 ++MEGK +DPKKAFL Sbjct: 787 SSMEGKNKDPKKAFL 743 Score = 78.0 bits (164), Expect(5) = 1e-26 Identities = 30/30 (100%), Positives = 30/30 (100%) Frame = +3 / +3 Query: 396 AMESSHITGDDGEGCNSSESGWTMYLASPM 485 AMESSHITGDDGEGCNSSESGWTMYLASPM Sbjct: 147 AMESSHITGDDGEGCNSSESGWTMYLASPM 236 Score = 35.9 bits (72), Expect(5) = 1e-26 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +1 / +2 Query: 1009 REEGFFWVLSFAFHGVLP 1062 R+EGFFW+L FAFH P Sbjct: 740 RKEGFFWILVFAFHRASP 793 Score = 34.1 bits (68), Expect(5) = 1e-26 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = +3 / +3 Query: 1095 VNCCCHVNLLQPSVII 1142 VNCC HVNLL PSVI+ Sbjct: 816 VNCCRHVNLL*PSVIL 863 Score = 28.1 bits (55), Expect(5) = 1e-26 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +2 / +2 Query: 602 RWR*Q*LPCLRCFDWVSQGQGA 667 RWR + P LRCF+ Q +GA Sbjct: 350 RWRRRRFPRLRCFNRSGQSEGA 415 Score = 23.5 bits (45), Expect(5) = 1e-26 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +2 / +2 Query: 764 AYQVLDELPQES 799 A+Q+LDEL QES Sbjct: 518 AHQILDELRQES 553 Score = 76.2 bits (160), Expect(3) = 4e-19 Identities = 32/48 (66%), Positives = 37/48 (77%) Frame = +2 / +2 Query: 395 CHGILPHHWG*RRGLQQQ*VWVDNVPGLPHAKRRWW*PQGKRQRWKQC 538 CHG++P+HWG* RGLQQQ V VDNVP L HA+RR Q +RQR KQC Sbjct: 146 CHGVIPYHWG*WRGLQQQRVRVDNVPCLSHARRR*RRRQKERQRRKQC 289 Score = 33.1 bits (66), Expect(3) = 4e-19 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +2 / +2 Query: 1094 G*LLLPCKSTATFGY 1138 G*LL PCKST TFGY Sbjct: 815 G*LLPPCKSTVTFGY 859 Score = 29.0 bits (57), Expect(3) = 4e-19 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = +3 / +1 Query: 1008 EGGRLFLGPQFCLP 1049 E GRLFL P FCLP Sbjct: 739 EKGRLFLDPCFCLP 780 Score = 60.6 bits (126), Expect(4) = 4e-18 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = -2 / -2 Query: 485 HGGGQVHCPPRLTAVAALAVIPSDVGGFHGR 393 HG G+VHCPP L AVAALA+IPSD+G HGR Sbjct: 236 HGRGKVHCPPGLAAVAALAIIPSDMG*LHGR 144 Score = 32.7 bits (65), Expect(4) = 4e-18 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -3 / -3 Query: 1135 TEGCSRFTWQQQLT 1094 TEG SRFTW+QQLT Sbjct: 856 TEGYSRFTWRQQLT 815 Score = 29.9 bits (59), Expect(4) = 4e-18 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -2 / -1 Query: 1061 GRTPWKAKLRTQKKPSSL 1008 G WKAK R QKKPS L Sbjct: 792 GEALWKAKTRIQKKPSFL 739 Score = 29.5 bits (58), Expect(4) = 4e-18 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = -1 / -1 Query: 804 CRLSCGSSSRTWYA 763 CRLSC SSSR W A Sbjct: 558 CRLSCRSSSRIWCA 517 Score = 58.8 bits (122), Expect(3) = 1e-10 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = +1 / +1 Query: 382 LRACLPWNPPTSLGMTARAATAVSLGGQCTWPPPC 486 L + LPW+ P SLGM ARAATA S GGQCT P PC Sbjct: 133 LSSPLPWSHPISLGMMARAATAASPGGQCTLPLPC 237 Score = 25.4 bits (49), Expect(3) = 1e-10 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 / +3 Query: 1013 RKAFFGSSVLPSM 1051 RKAFFGS LPS+ Sbjct: 744 RKAFFGSLFLPSI 782 Score = 24.4 bits (47), Expect(3) = 1e-10 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +1 / +1 Query: 1096 LTVAAM*IYC 1125 LTVAAM*IYC Sbjct: 817 LTVAAM*IYC 846 Score = 41.4 bits (84), Expect(4) = 3e-09 Identities = 18/34 (52%), Positives = 20/34 (58%) Frame = -3 / -3 Query: 487 CMGEARYIVHXXXXXXXXXXXXPVMWEDSMAGRR 386 CMGEARYIVH PV+W+DSMA R Sbjct: 238 CMGEARYIVHPDSLLLQPSPSSPVIWDDSMAEER 137 Score = 31.8 bits (63), Expect(4) = 3e-09 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = -1 / -1 Query: 1137 *PKVAVDLHGSNS*P 1093 *PKV VDLHG NS*P Sbjct: 858 *PKVTVDLHGGNS*P 814 Score = 24.9 bits (48), Expect(4) = 3e-09 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -2 / -2 Query: 806 VAGFLAGARREPGM 765 +AGFLAGA RE G+ Sbjct: 560 LAGFLAGAHREFGV 519 Score = 23.5 bits (45), Expect(4) = 3e-09 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 / -3 Query: 1073 VVNHGRTPWKAKLRTQKK 1020 VVNHGR+ + K + KK Sbjct: 805 VVNHGRSSMEGKNKDPKK 752
>LOC_Os09g29780:12009.t02656:unspliced-genomic expressed protein| Length = 3631 Score = 58.8 bits (122), Expect = 7e-08 Identities = 22/30 (73%), Positives = 24/30 (80%) Frame = +3 / -2 Query: 393 PAMESSHITGDDGEGCNSSESGWTMYLASP 482 P MES + DDGE CNS+ESGWTMYLASP Sbjct: 2694 PVMESPRLIEDDGEECNSNESGWTMYLASP 2605 Score = 50.1 bits (103), Expect = 3e-05 Identities = 18/32 (56%), Positives = 20/32 (62%) Frame = -1 / +3 Query: 489 FAWGRPGTLSTQTHCCCSPRRHPQ*CGRIPWQ 394 + WG PGT ST+ H CC P HPQ* IP Q Sbjct: 2598 YVWGMPGTSSTRIHYCCIPHHHPQ*AEGIPSQ 2693 Score = 44.1 bits (90), Expect = 0.002 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +1 / -3 Query: 400 WNPPTSLGMTARAATAVSLGGQCTWPPP 483 WNP SL M R AT ++ GG+CTW PP Sbjct: 2687 WNPLGSLRMMVRNATVMNPGGRCTWHPP 2604 Score = 38.2 bits (77), Expect = 0.12 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +2 / -1 Query: 392 ACHGILPHHWG*RRGLQQQ*VWVDNVPGLPH 484 +C GI H G* G+QQ *+ VD+VPG+PH Sbjct: 2695 SCDGIPSAH*G*W*GMQQ**IRVDDVPGIPH 2603 Score = 35.4 bits (71), Expect = 0.79 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 / +1 Query: 482 GGGQVHCPPRLTAVAALAVIPSDVGGFHGRQ 390 GG QVH PP VA L +I ++ GFH R+ Sbjct: 2605 GGCQVHRPPGFITVAFLTIILNEPRGFHHRR 2697
>LOC_Os08g17820:12008.t01653:unspliced-genomic actin binding protein, putative, expressed| Length = 10957 Score = 39.1 bits (79), Expect = 0.062 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 / +3 Query: 233 QCSSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLH 349 + +SP +S L P S +A VPL +H CF LFLH Sbjct: 9909 EATSPPHFSGELVAPVSNPSAVVPLL*TTHVCFILLFLH 10025 Score = 31.8 bits (63), Expect = 10.0 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 / +3 Query: 1059 PMVDHHPPITSRVNCCCHVNLLQPS 1133 P HHPP+ ++NC LLQ S Sbjct: 1386 PHHHHHPPVVHQINCLLRHRLLQAS 1460
>LOC_Os02g34030:12002.t03044:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4272 Score = 31.3 bits (62), Expect(2) = 0.082 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 / -1 Query: 344 LHSISFSFTRSSRCAPACHGILPHHWG 424 +H ++F SS C H + P HWG Sbjct: 3072 IHVMNFPSLMSSHCNQQSHSLHPRHWG 2992 Score = 30.4 bits (60), Expect(2) = 0.082 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +1 / -1 Query: 283 YFCCICSLGYL*PFLFHFLVSP 348 Y CCIC+L + PFL F + P Sbjct: 3504 YLCCICTLRHCDPFLSLFHLHP 3439
>LOC_Os04g41000:12004.t03661:unspliced-genomic expressed protein| Length = 4037 Score = 36.8 bits (74), Expect = 0.30 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = -1 / -1 Query: 705 HHSVVGPRQATRAAP*PWLTQSKHRRQGSHCHRHRPGIPCPLSCHG 568 H SV+ + P PW++ S+H R S + RP P PL+ G Sbjct: 401 HRSVMVHGCTSSLQPRPWISSSRHSRPSSPVQQRRPPPPPPLAVPG 264
>LOC_Os09g26570:12009.t02336:unspliced-genomic prenyl-dependent CAAX protease, putative, expressed| Length = 2987 Score = 35.4 bits (71), Expect = 0.79 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +2 / -3 Query: 218 ARYPVQCSSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRSS 379 A +P CS+ + + P ST + ++ HS +++LHS S FT S Sbjct: 780 AGFPTHCSNHLWFCHQVVSPLSTRGTAALRSLCLHSTLEYIYLHSFSEGFTLHS 619
>LOC_Os12g11500:12012.t01025:unspliced-genomic resistance protein SlVe1 precursor, putative| Length = 2982 Score = 35.0 bits (70), Expect = 1.1 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 / -1 Query: 324 LVSLSCFSIPFHSHSLDLLVARLPAMESSHITGDDGEGCNSS 449 L + CF P SLDL++ ++ A + ++ D EGC+++ Sbjct: 1617 LQAFPCFPCPLRYSSLDLVIGKVKASDVRKVSQDIWEGCHAA 1492
>LOC_Os04g34720:12004.t03146:unspliced-genomic DNA binding protein, putative, expressed| Length = 9017 Score = 35.0 bits (70), Expect = 1.1 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +1 / +3 Query: 220 SLSSPVFFSK*LFILSLHPCFYFCCICSLGYL*PF 324 S S P FF+ LFIL LHP Y+ L +*PF Sbjct: 1548 SPSPPRFFTFFLFILRLHPTLYYPTQAPLALI*PF 1652
>LOC_Os11g38580:12011.t03401:unspliced-genomic expressed protein| Length = 4822 Score = 34.5 bits (69), Expect = 1.5 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = +2 / -3 Query: 239 SSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 SSPSS+S F P + ++ L+ FS C +FL SFSF Sbjct: 1529 SSPSSFSSFFSPPPTCFSSVPSLSSFSLFCSSFLSSSFTSFSF 1401
>LOC_Os03g13040:12003.t01099:unspliced-genomic haemolysin-III related family protein, expressed| Length = 4532 Score = 34.5 bits (69), Expect = 1.5 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -1 / -1 Query: 618 HCHRHRPGIPCPLSCHGR 565 HCHRHRP P P S GR Sbjct: 2096 HCHRHRPTAPLPASPAGR 2043
>LOC_Os12g11930:12012.t01064:unspliced-genomic disease resistance protein SlVe2 precursor, putative, expressed| Length = 3273 Score = 34.1 bits (68), Expect = 2.0 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 / -1 Query: 324 LVSLSCFSIPFHSHSLDLLVARLPAMESSHITGDDGEGCNSS 449 L + CF P SLDL++ ++ A + + D EGC+++ Sbjct: 1908 LQAFPCFPCPLRYSSLDLVIGKVKASDVRKVPQDIWEGCHAA 1783
>LOC_Os11g18320:12011.t01603:unspliced-genomic expressed protein| Length = 9674 Score = 34.1 bits (68), Expect = 2.0 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +2 / +1 Query: 227 PVQCSSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSIS 358 P QC S F C P+ S++SVP+ S S F ++ L++IS Sbjct: 2047 P*QCHFHSIGLFPACHPSLNSSSSVPVTHVSFSLFLYVTLYNIS 2178
>LOC_Os05g10670:12005.t00901:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed| Length = 2247 Score = 34.1 bits (68), Expect = 2.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 / -2 Query: 1080 PITSRVNCCCHVNLLQPSVIIIIFI 1154 P+T CCCH PS IIII + Sbjct: 254 PLTGDATCCCHGGACAPSPIIIILL 180
>LOC_Os12g11410:12012.t01016:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 2707 Score = 34.1 bits (68), Expect = 2.0 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = -1 / -1 Query: 705 HHSVVGPRQATRAAP*PWLTQSKHRRQGSHCHRHRPGIPCPLSCHGR 565 HH P A + P T S HR + H HRHR P H R Sbjct: 325 HHCRQPPPPAPQPPQSPAATVSHHRHRHRHRHRHRHPCPAATVSHHR 185
>LOC_Os07g35660:12007.t03241:unspliced-genomic receptor-like serine-threonine protein kinase, putative, expressed| Length = 6903 Score = 28.6 bits (56), Expect(2) = 2.6 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 / -3 Query: 406 PPTSLGMTARAATAVSLGGQCTWPPPCK 489 PPTS TA A + + T PPPC+ Sbjct: 742 PPTSPACTAPARRSSGTSRRRTRPPPCR 659 Score = 22.1 bits (42), Expect(2) = 2.6 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +2 / -3 Query: 470 PGLPHAKRRWW*PQGKRQR 526 PG P R W * G+R+R Sbjct: 649 PGPPPRSRPWR*RAGRRRR 593
>LOC_Os10g24640:12010.t01889:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3797 Score = 33.6 bits (67), Expect = 2.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +2 / -1 Query: 344 LHSISFSFTRSSRCAPACHGILPHHWG 424 +H ++F SSRC H + P HWG Sbjct: 3752 IHLMNFPSLMSSRCNQQSHSLHPRHWG 3672
>LOC_Os03g47740:12003.t04134:unspliced-genomic BEL1-related homeotic protein 30, putative, expressed| Length = 6654 Score = 33.6 bits (67), Expect = 2.8 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / +2 Query: 1053 CSPMVDHHPPITSRVNCCCHVNL 1121 CS ++ HHPP S N CC NL Sbjct: 389 CSTLIVHHPPPHS*PNLCCDSNL 457
>LOC_Os02g06870:12002.t00584:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4132 Score = 33.6 bits (67), Expect = 2.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 / +2 Query: 10 PSTNTRTEPSPMKRGGHGW 66 P T + T PSP KR GHGW Sbjct: 590 PITFSPTSPSPTKRHGHGW 646
>LOC_Os04g36570:12004.t03278:unspliced-genomic expressed protein| Length = 2242 Score = 29.5 bits (58), Expect(2) = 3.0 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +2 / +3 Query: 350 SISFSFTRSSRCAPACHGILPHHWG*RRG 436 S +F F RS R P CH H G*RRG Sbjct: 99 SSAFFFPRSCRPDPRCHHRGGPHRG*RRG 185 Score = 25.8 bits (50), Expect(2) = 3.0 Identities = 12/37 (32%), Positives = 15/37 (40%) Frame = +3 / +3 Query: 1041 CLPWCSPMVDHHPPITSRVNCCCHVNLLQPSVIIIIF 1151 C PW P H C + LLQ S+ +I F Sbjct: 777 CRPWSRPPCRHRFCTCGPYTAPCRLLLLQVSMPVICF 887
>LOC_Os12g19590:12012.t01802:unspliced-genomic nucleotide binding protein, putative, expressed| Length = 9201 Score = 33.1 bits (66), Expect = 3.8 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +3 / -3 Query: 1044 LPWCSPMVDHHPPITSRVNCCCHVN 1118 +P C P + HHPPIT+ C +N Sbjct: 1882 IPTCQPQILHHPPITTGPCCWLPLN 1808
>LOC_Os11g35920:12011.t03140:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 10316 Score = 33.1 bits (66), Expect = 3.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +2 / -1 Query: 227 PVQCSSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFL 346 P+Q P + L + ASTS+A V + H+C F+FL Sbjct: 6944 PMQTQ*PCP*ATLLALSASTSSAVVTELLTRHTCLVFVFL 6825
>LOC_Os04g32460:12004.t02925:unspliced-genomic transport inhibitor response 1 protein, putative, expressed| Length = 4496 Score = 33.1 bits (66), Expect = 3.8 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +2 / +1 Query: 461 DNVPGLPHAKRRWW*PQGKRQRWKQ 535 D + LP + RWW +G+R+RW++ Sbjct: 778 DPIV*LPRRRLRWWWGRGRRRRWRR 852
>LOC_Os05g39070:12005.t03449:unspliced-genomic NLI interacting factor-like phosphatase family protein, expressed| Length = 2371 Score = 33.1 bits (66), Expect = 3.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +1 / -3 Query: 7 PPSTNTRTEPSPMKRGGHGW 66 PP+T TR PSP + G GW Sbjct: 233 PPATRTRPPPSPPRAGPRGW 174
>LOC_Os04g17340:12004.t01486:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3335 Score = 33.1 bits (66), Expect = 3.9 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -1 / +3 Query: 363 ENEMEWRNKKVKQEWLKIAKGTDAAEVEAGMQRK 262 + E+ R KK KQEW +K T A EVEA ++ Sbjct: 2406 QQEINHRLKKTKQEWRVKSKVTTADEVEANKAKR 2507
>LOC_Os03g56110:12003.t04871:unspliced-genomic homeobox protein rough sheath 1, putative, expressed| Length = 5946 Score = 33.1 bits (66), Expect = 3.9 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 / -1 Query: 642 SKHRRQGSHCHRHRPGIPCPL 580 S HRR+G CHR R +P PL Sbjct: 5307 SFHRREGRACHRRRLPVPLPL 5245
>LOC_Os04g44730:12004.t04011:unspliced-genomic lanC-like protein 2, putative, expressed| Length = 4241 Score = 28.6 bits (56), Expect(2) = 5.1 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 / +1 Query: 311 IFSHSCFTFLFLHSISFSFT 370 IF+ SCF +FL +SF+F+ Sbjct: 2071 IFNFSCFKIVFLIELSFNFS 2130 Score = 26.7 bits (52), Expect(2) = 5.1 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +3 / +1 Query: 354 FHSHSLDLLVARLPAMESS 410 F SHSL+LL+ P MES+ Sbjct: 4117 FESHSLNLLMYPFPDMESN 4173
>LOC_Os07g20310:12007.t01836:unspliced-genomic expressed protein| Length = 898 Score = 32.7 bits (65), Expect = 5.3 Identities = 9/27 (33%), Positives = 19/27 (70%) Frame = +3 / +1 Query: 1089 SRVNCCCHVNLLQPSVIIIIFIQCLPA 1169 +R++CCC ++ P + ++F++C PA Sbjct: 478 ARLHCCCAIHPTLPLPLPLLFLRCAPA 558
>LOC_Os03g60110:12003.t05254:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 4439 Score = 32.7 bits (65), Expect = 5.3 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -2 / +3 Query: 1061 GRTPWKAKLRTQKKPSSLFSNA 996 G+TPWKA+LRT + P++ F + Sbjct: 3192 GQTPWKARLRTSE*PTAHFDRS 3257
>LOC_Os03g38590:12003.t03302:unspliced-genomic SC3 protein, putative, expressed| Length = 4396 Score = 32.7 bits (65), Expect = 5.3 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 / +3 Query: 227 PVQCSSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSI 355 P SSP+S F P+ +P + S SCFT ++ +++ Sbjct: 633 PFAVSSPASSPCFFVSPSENIQTHLPFLLDSSSCFTCIYRYAL 761
>LOC_Os03g26704:12003.t02354:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6743 Score = 32.7 bits (65), Expect = 5.3 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 / -2 Query: 257 SFFLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRSSRCA 388 S L + ASTS+A V + + HSC F+F S S C+ Sbjct: 2758 SNLLALSASTSSAVVTVLLTRHSCLVFIFFSR*LISCRTS*NCS 2627
>LOC_Os02g58090:12002.t05380:unspliced-genomic splicing factor 3B subunit 2, putative, expressed| Length = 5061 Score = 32.7 bits (65), Expect = 5.3 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 / -2 Query: 209 GRLARYPVQCSSPSSYSFFLCIPASTSAASVPLAIFSHS 325 GR C SFF C+P S+S+ S P A F+ S Sbjct: 788 GRCEERTFFCLLDKPPSFFCCVPCSSSSESDPAAFFAAS 672
>LOC_Os02g41910:12002.t03778:unspliced-genomic F-box domain containing protein, expressed| Length = 1427 Score = 32.7 bits (65), Expect = 5.3 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +3 / -3 Query: 930 CMCLMHHRSILKMGMYPSLIVRSIGEEGGRLFLGPQFCLPWCSPMVDHHPPITSRV 1097 C+ L+ R + ++ SL+ + E L L C+ WCS + H TSR+ Sbjct: 366 CVALLSRRGL*LNFLWSSLLRKKPATEWPSLLLEKFVCMKWCSDVTACHCLQTSRI 199
>LOC_Os01g13550:12001.t01217:unspliced-genomic beta-amylase, putative, expressed| Length = 4410 Score = 32.7 bits (65), Expect = 5.3 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 / +1 Query: 1014 GRLFLGPQFCLPWCSPMVDHHP 1079 GRL + P+ PWC P V H P Sbjct: 3070 GRLMIDPKIY*PWCMP*VSHSP 3135
>LOC_Os07g48890:12007.t04517:unspliced-genomic poly, putative, expressed| Length = 5455 Score = 32.7 bits (65), Expect = 5.3 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +1 / +2 Query: 235 VFFSK*LFILSLHPCFYFCCICSLGYL*PFLFHFLVSPFH 354 +FF *L L CF+ C SLG++* FL V H Sbjct: 2948 IFFPL*LLYFHL*WCFFSCSASSLGFI*RFLQLMFVRDIH 3067
>LOC_Os07g45360:12007.t04175:unspliced-genomic ATP-dependent RNA helicase DDX52, putative, expressed| Length = 4301 Score = 32.7 bits (65), Expect = 5.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -1 / -1 Query: 708 CHHSVVGPRQATRAAP*PWLTQSKHRRQ 625 C S R TRA+P PWLT ++ RR+ Sbjct: 134 CGRSACRRRAPTRASPSPWLTFARRRRR 51
>LOC_Os07g17270:12007.t01587:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6981 Score = 32.7 bits (65), Expect = 5.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 / +2 Query: 477 RPGTLSTQTHCCCSPRRHPQ*CGRIPWQAGAQR 379 RPGT ++ + C RR CG P + GA+R Sbjct: 6815 RPGTHTSSSRTSCVSRRGEMSCGAAPIRGGAER 6913
>LOC_Os05g41010:12005.t03640:unspliced-genomic oxidoreductase, putative, expressed| Length = 2935 Score = 25.8 bits (50), Expect(3) = 6.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 / +3 Query: 4 SPPSTNTRTEPSPMKRGGH 60 SPPS++ S KRGGH Sbjct: 57 SPPSSSLTRSLSAAKRGGH 113 Score = 24.9 bits (48), Expect(3) = 6.1 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 / +1 Query: 470 PGLPHAKRRWW*PQGKRQRWKQ 535 P L +RRW +G R+RW++ Sbjct: 292 PHLRRRRRRWRCCRGWRRRWRR 357 Score = 23.1 bits (44), Expect(3) = 6.1 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +1 / +1 Query: 403 NPPTSLGMTARAATAVSLGGQCTWPPP 483 +PP S+ T A T+ S PPP Sbjct: 88 SPPRSVAATVAATTSTSSSPPQPPPPP 168
>LOC_Os07g01820:12007.t00079:unspliced-genomic MADS-box transcription factor 15, putative, expressed| Length = 6482 Score = 25.8 bits (50), Expect(2) = 6.3 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 / +2 Query: 227 PVQCSSPSSYSFFLCIPASTSAASVPLAIFSHS 325 P+Q SS + C+P +S+ L+IFS S Sbjct: 596 PIQASSATPGGGVSCMPPHFGKSSLSLSIFSLS 694 Score = 23.5 bits (45), Expect(2) = 6.3 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 / +2 Query: 322 FLFHFLVSPFHFIL 363 F FLVSPF F+L Sbjct: 683 FSLSFLVSPFSFLL 724
>LOC_Os11g27550:12011.t02369:unspliced-genomic hypothetical protein| Length = 490 Score = 32.2 bits (64), Expect = 7.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 / -1 Query: 206 RGRLARYPVQCSSPSSYSFFLCIPASTSAASVP 304 R A YP C+SPS +P+S++AA P Sbjct: 148 RSSAASYPSPCASPSGAGSRASLPSSSTAAQTP 50
>LOC_Os11g20510:12011.t01820:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6219 Score = 32.2 bits (64), Expect = 7.3 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 / -2 Query: 251 SYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRS 376 S+S C A TS+A + HSCF F+F SF+ S Sbjct: 2705 SFSQSFCFSAVTSSAIGSRFLTRHSCFGFVFFSRWLISFSTS 2580
>LOC_Os10g12590:12010.t01036:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2428 Score = 32.2 bits (64), Expect = 7.3 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 / -1 Query: 272 IPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRSS 379 + ASTS+A V L + SHSC F IS +F + S Sbjct: 1156 LSASTSSAVVTLLLTSHSCLVFFSQWLISCTF*KRS 1049 Score = 32.2 bits (64), Expect = 7.3 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = -1 / +3 Query: 381 REDLVNENEMEWRNKKVKQEWLKIAKGTDAAEVEA 277 RE E+ KK KQEWL +K T A EVEA Sbjct: 1047 RERFQKVQEINHWLKKTKQEWLVKSKVTTADEVEA 1151
>LOC_Os05g08310:12005.t00711:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6383 Score = 32.2 bits (64), Expect = 7.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 / -3 Query: 257 SFFLCIPASTSAASVPLAIFSHSCFTFLFL 346 S L + ASTS+A V + + HSC F+FL Sbjct: 2532 SNLLALLASTSSAVVTVLLTRHSCLVFVFL 2443
>LOC_Os02g52230:12002.t04804:unspliced-genomic transport inhibitor response 1 protein, putative, expressed| Length = 3470 Score = 32.2 bits (64), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +3 / +2 Query: 339 CFSIPFHSHSLDLLVARLPAM 401 C S+PF+ +L+ LVAR PAM Sbjct: 1577 CVSVPFNFEALEALVARSPAM 1639
>LOC_Os01g47080:12001.t04157:unspliced-genomic pyruvate kinase isozyme G, chloroplast precursor, putative,| expressed Length = 7340 Score = 32.2 bits (64), Expect = 7.3 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = +2 / +3 Query: 491 RRWW*PQGKRQRWKQ 535 RRWW QG+R+RW++ Sbjct: 129 RRWWLRQGRRRRWRR 173
>LOC_Os11g06460:12011.t00538:unspliced-genomic ribosome inactivating protein, expressed| Length = 2281 Score = 32.2 bits (64), Expect = 7.3 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 / -1 Query: 624 GSHCHRHRPGIPCPLSC 574 G HCH R +PCP SC Sbjct: 265 GRHCHPERLRLPCPSSC 215
>LOC_Os08g29410:12008.t02696:unspliced-genomic hypothetical protein| Length = 1212 Score = 32.2 bits (64), Expect = 7.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -1 / +2 Query: 684 RQATRAAP*PWLTQSKHRRQGSHCHRHRPGIPCPLSCH 571 RQ T +AP W RR+ S C R + P+ CH Sbjct: 1076 RQRTSSAPHSWEAHRLCRRRTSRCPLRRQTLVLPVLCH 1189
>LOC_Os08g14940:12008.t01368:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 3302 Score = 32.2 bits (64), Expect = 7.3 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 / -1 Query: 609 RHRPGIPCPLSCHGRGK 559 R +P +PCPL CHG K Sbjct: 83 REQPKLPCPLDCHG*SK 33
>LOC_Os07g09450:12007.t00819:unspliced-genomic mitochondrial import inner membrane translocase subunit TIM14,| putative, expressed Length = 3690 Score = 32.2 bits (64), Expect = 7.3 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 / -3 Query: 684 RQATRAAP*PWLTQSKHRRQGSHCHRHRP 598 RQ A P P S+HRR+G RHRP Sbjct: 2308 RQGQAAPPPPPPPPSRHRRRGRRSARHRP 2222
>LOC_Os04g06500:12004.t00533:unspliced-genomic conserved hypothetical protein| Length = 2707 Score = 32.2 bits (64), Expect = 7.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 / +1 Query: 498 HRRFAWGRPGTLSTQTHCCCSPR 430 H+R ++ PG+ S Q HC C PR Sbjct: 121 HQRLSFFDPGSGSPQLHCSCRPR 189
>LOC_Os04g17050:12004.t01458:unspliced-genomic glutaredoxin family protein, expressed| Length = 8514 Score = 24.9 bits (48), Expect(2) = 8.2 Identities = 11/28 (39%), Positives = 13/28 (46%) Frame = -1 / +2 Query: 504 YHHRRFAWGRPGTLSTQTHCCCSPRRHP 421 + RR GRP +T CC S R P Sbjct: 413 WRRRRPRKGRPWICCRRTWCCTSTRPAP 496 Score = 24.0 bits (46), Expect(2) = 8.2 Identities = 10/23 (43%), Positives = 10/23 (43%) Frame = -1 / +2 Query: 633 RRQGSHCHRHRPGIPCPLSCHGR 565 RR H H P PC L GR Sbjct: 317 RRPHPRHHHHHPRGPCQLESLGR 385
>LOC_Os06g45990:12006.t04287:unspliced-genomic patellin-5, putative, expressed| Length = 2307 Score = 25.8 bits (50), Expect(2) = 9.1 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 / -1 Query: 239 SSPSSYSFFLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRSS 379 SSP S SFF + S+S+ + FS + + F S + +F +S Sbjct: 675 SSPCSSSFFSSVTGSSSSFFSSPSFFSPAASSTAFSSSAAAAFFLAS 535 Score = 23.1 bits (44), Expect(2) = 9.1 Identities = 5/7 (71%), Positives = 7/7 (100%) Frame = +1 / -2 Query: 469 TWPPPCK 489 +WPPPC+ Sbjct: 545 SWPPPCR 525
>LOC_Os04g38026:12004.t03373:unspliced-genomic sugar transport protein 5, putative, expressed| Length = 6078 Score = 27.6 bits (54), Expect(2) = 9.3 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = -3 / +2 Query: 400 MAGRRATXXXXXXX*NGMEKQESETRMAKDSQGNRCSRSRSRDAEKE*ITTW 245 ++GR+A K+ + MA+ S N CS ++ R + E ++ W Sbjct: 5249 VSGRKAATKIVMVRSQPA*KRNTPYFMAQSSAMNTCSSTKERQSATEMLSAW 5404 Score = 27.2 bits (53), Expect(2) = 9.3 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -1 / +1 Query: 645 QSKHRRQGSHCHRH 604 +++ RR+G HCH H Sbjct: 3655 RARERRRGQHCHAH 3696
>LOC_Os02g26670:12002.t02361:unspliced-genomic expressed protein| Length = 1411 Score = 24.9 bits (48), Expect(3) = 9.5 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +3 / -1 Query: 1077 PPITSRVNCCC 1109 PP+T R CCC Sbjct: 832 PPMTRRRRCCC 800 Score = 24.4 bits (47), Expect(3) = 9.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +1 / -3 Query: 373 IFSLRACLPWNPPTS 417 + SL LPW PPTS Sbjct: 1151 LLSLSL*LPWPPPTS 1107 Score = 21.7 bits (41), Expect(3) = 9.5 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +2 / -3 Query: 1031 SSVLPSMVFSHG*PPPP 1081 SSV PS S PPPP Sbjct: 944 SSVSPSTPQSETLPPPP 894
>LOC_Os12g06680:12012.t00553:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6214 Score = 31.8 bits (63), Expect = 10.0 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 / -2 Query: 257 SFFLCIPASTSAASVPLAIFSHSCFTFLFL 346 S + ASTS+A V + + HSC F+FL Sbjct: 3078 SNLFALSASTSSAVVTVLLTRHSCLVFIFL 2989
>LOC_Os11g44830:12011.t04011:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6087 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 / -1 Query: 263 FLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 FL +PA S++ +I H CFT FL IS +F Sbjct: 3576 FLYVPAIVSSSVCWESILIHGCFTVEFLGEISDAF 3472
>LOC_Os11g41190:12011.t03657:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6087 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 / -1 Query: 263 FLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 FL +PA S++ +I H CFT FL IS +F Sbjct: 3576 FLYVPAIVSSSVCWESILIHGCFTVEFLGEISDAF 3472
>LOC_Os11g38300:12011.t03372:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6086 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 / -1 Query: 263 FLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 FL +PA S++ +I H CFT FL IS +F Sbjct: 3575 FLYVPAIVSSSVCWESILIHGCFTVEFLGEISDAF 3471
>LOC_Os05g44786:12005.t03967:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6088 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 / -1 Query: 263 FLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 FL +PA S++ +I H CFT FL IS +F Sbjct: 3577 FLYVPAIVSSSVCWESILIHGCFTVEFLGEISDAF 3473
>LOC_Os05g06590:12005.t00549:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2815 Score = 31.8 bits (63), Expect = 10.0 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 / -3 Query: 266 LCIPASTSAASVPLAIFSHSCFTFLFLHSISFSFTRSSRCA 388 L + AS+S+A+V + + HSC F+F S S +C+ Sbjct: 1604 LALSASSSSAAVTVLLARHSCLGFVFFSRWLISCCTS*KCS 1482
>LOC_Os05g02090:12005.t00108:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5417 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 / -1 Query: 263 FLCIPASTSAASVPLAIFSHSCFTFLFLHSISFSF 367 FL +PA S++ +I H CFT FL IS +F Sbjct: 2906 FLYVPAIVSSSVCWESILIHGCFTVEFLGEISDAF 2802
>LOC_Os02g14880:12002.t01282:unspliced-genomic hypothetical protein| Length = 387 Score = 31.8 bits (63), Expect = 10.0 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 / -3 Query: 1053 CSPMVDHHPPITSRVNCC 1106 CSP+ HH + SR +CC Sbjct: 112 CSPLYAHHRSVASRAHCC 59
>LOC_Os10g01134:12010.t00013:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 6317 Score = 31.8 bits (63), Expect = 10.0 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -1 / +2 Query: 510 CGYHHRRFAWGRPGTLSTQTHCCCSPRRH 424 C HRR+ W PG CCC R+H Sbjct: 17 C*LAHRRYQWRLPGPHRRCCCCCCWFRQH 103
>LOC_Os02g10140:12002.t00862:unspliced-genomic TGACG-sequence-specific DNA-binding protein TGA-2.1, putative| Length = 2946 Score = 31.8 bits (63), Expect = 10.0 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 / -1 Query: 361 LIH*IFSLRACLPWNPPTSLGMTARAATAVSLGGQCTWPPP 483 LI+ + S AC W PP S+ +A + S G + PPP Sbjct: 1476 LINKLPSSLACFSWLPPCSVQASAASWRPASWGPRAPTPPP 1354 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 454,746,305 Number of extensions: 7500616 Number of successful extensions: 42312 Number of sequences better than 10.0: 63 Length of query: 396 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 346 Effective length of database: 52,799,986 Effective search space: 18268795156 Effective search space used: 18268795156 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
