ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111n06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070377:Os02g0465500 327 2e-89
2Os04g0495000:Os04g0495000 32 1.4
3AK066418:Os12g0617900 30 4.0
4AK065064:Os12g0617900 30 4.0
5AK062331:Os05g0480500 30 4.0
6Os03g0646900:Os03g0646900 30 5.2
7AK105103:Os01g0821900 30 5.2
8Os11g0470200:Os11g0470200 29 6.8
9AK120211:Os05g0144400 29 6.8
10AK120835:Os10g0483400 29 8.8

>AK070377:Os02g0465500 |
          Length = 247
 Score =  327 bits (837), Expect = 2e-89
 Identities = 167/241 (69%), Positives = 192/241 (79%)
 Frame = +1

Query: 331  MSKPENMFSLLNLDAEDDGGNDXXXXXXXXXXXXXXAASKPDKCVQNDTTIVSCNGGALA 510
            MS+  N F +L+LD E  G +D              A +  +    +DT +++ + G+L 
Sbjct: 1    MSELANKFLVLHLDGEGGGADDTEEALIQTSSSIKEADAGENAL--SDTLVLNYDEGSLV 58

Query: 511  SSSGGYRMPLVWIDLEMTGLDILKDRILEIACIVTDGKLTKQIEGPNLVISQSKACLDNM 690
            SSSG Y+MPLVWIDLEMTGLD+ KDRILEIACI+TDGKLTKQIEGP+LVI+Q K  LDNM
Sbjct: 59   SSSGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKKDLLDNM 118

Query: 691  NEWCKTHHASSGLTERVLQSEISEGDAEKQVLDFLMKHVGSGTPSIAGNSVYVDLLFLKK 870
            +EWCKTHHA+SGLT+RVLQS ISE DAE QVLDF+ KHVGS  P IAGNSVYVDLLFLK 
Sbjct: 119  DEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVDLLFLKN 178

Query: 871  YMPQLAAIFSHVIVDVSSIMALCTRWYPKERKQTPRKGKSHRAMDDIKESIAELKYYKAN 1050
            YMPQLAAIFSHVIVDVSSIMALC RWYPKERK+TP+KGK HRAM+DIKESIAELKYY+ N
Sbjct: 179  YMPQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAELKYYEDN 238

Query: 1051 I 1053
            I
Sbjct: 239  I 239



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>Os04g0495000:Os04g0495000 |
          Length = 450

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 1231 ICHRWPQT*EEL*ARRGQVGKLPS 1160
            +CHRWP T  +L AR GQV   P+
Sbjct: 86   LCHRWPSTKRQLRARAGQVPAEPN 109



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>AK066418:Os12g0617900 |
          Length = 998

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 763 GDAEKQVLDFLMKHVGSGTPSIAGNSVYVDLLFLKKYMPQLAAIFSHVIVDVSSIMAL 936
           GD   Q  D +      G PS AG+  Y+D LFL  Y+ +      H +  ++ ++AL
Sbjct: 710 GDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDR----GQHSLETITLLLAL 763



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>AK065064:Os12g0617900 |
          Length = 1009

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 763 GDAEKQVLDFLMKHVGSGTPSIAGNSVYVDLLFLKKYMPQLAAIFSHVIVDVSSIMAL 936
           GD   Q  D +      G PS AG+  Y+D LFL  Y+ +      H +  ++ ++AL
Sbjct: 710 GDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDR----GQHSLETITLLLAL 763



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>AK062331:Os05g0480500 |
          Length = 167

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 197 STGVSSCPSRSGPRHLRPPPPADLHQRPRTR 289
           S+  SSCPS + P H  PPP A L   P +R
Sbjct: 72  SSSSSSCPSTAAPPH--PPPAATLRVAPPSR 100



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>Os03g0646900:Os03g0646900 |
          Length = 851

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 763 GDAEKQVLDFLMKHVGSGTPSIAGNSVYVDLLFLKKYM 876
           GD   Q  D +      G PS AG+  Y+D LFL  Y+
Sbjct: 524 GDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYV 561



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>AK105103:Os01g0821900 |
          Length = 775

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
 Frame = -1

Query: 824 DGVPEP-------TCFMRKSNTCFSASPSEISLCSTLSVNPLD-----A*WVLHHSFILS 681
           D +PE         C  RK+N+C +  P  I L    S NPL      A   +HH  I+ 
Sbjct: 355 DNIPETFLSDNQGLCSSRKNNSCIAIMPKPIVLNPNSSTNPLSQATPTAPSSMHHKKIIL 414

Query: 680 KQALL*LITKLGPSICFVSLPSV 612
             + L  I   G  I  V + SV
Sbjct: 415 SVSTLIAIAGGGTIIIGVIIISV 437



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>Os11g0470200:Os11g0470200 |
          Length = 407

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -2

Query: 952 GTTGCTKP*YCSHQQSRERRWLQAVAYTSLEIVNLRKLNSQLL 824
           GT G T P Y  H Q  E+         +LEI+  RKLN   L
Sbjct: 252 GTLGYTAPEYAIHGQLSEKVDTYGFGVVTLEIIGGRKLNDARL 294



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>AK120211:Os05g0144400 |
          Length = 883

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +1

Query: 763 GDAEKQVLDFLMKHVGSGTPSIAGNSVYVDLLFLKKYMPQLAAIFSHVIVDVSSIMAL 936
           GD   Q  D +      G PS AG+  Y+D LFL  Y+ +      H +  ++ ++AL
Sbjct: 585 GDLHGQFGDLMRLFDEYGYPSTAGDITYIDYLFLGDYVDR----GQHSLETITLLLAL 638



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>AK120835:Os10g0483400 |
          Length = 387

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 952 GTTGCTKP*YCSHQQSRERRWLQAVAYTSLEIVNLRKLNSQLL 824
           GT G T P Y  H Q  E+    +     LEI++ RKLN   L
Sbjct: 232 GTLGYTAPEYAIHGQLSEKVDTYSFGVVVLEIISGRKLNDARL 274


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 32,462,941
Number of extensions: 682591
Number of successful extensions: 2236
Number of sequences better than 10.0: 10
Number of HSP's gapped: 2224
Number of HSP's successfully gapped: 10
Length of query: 453
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 349
Effective length of database: 11,235,591
Effective search space: 3921221259
Effective search space used: 3921221259
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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