| Clone Name | FLbaf111n03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001071603.1| Oryza sativa (japonica cultivar-group) Os10g0517400 (Os10g0517400) mRNA, complete cds Length = 1406 Score = 680 bits (343), Expect = 0.0 Identities = 858/1029 (83%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 142 accgccgccgcctgccgccgcgctgcgcctcggaccac---tcttctggccgtgggaaaa 198 |||| ||||||||||||||||||||||| ||| || | |||||||||||||| | || Sbjct: 174 accgtcgccgcctgccgccgcgctgcgcatcgcgccgcccctcttctggccgtggcagaa 233 Query: 199 ggtgaatgttgggcccctttcagtttcccccatgggttttggaacatgggcttggggcaa 258 |||||| || || |||||||| ||||| || ||||| |||||||||||||||||||| || Sbjct: 234 ggtgaaagtcggtcccctttctgtttcgcctatgggatttggaacatgggcttgggggaa 293 Query: 259 ccagctgctctggggctacgaggaaagcatggacagtgaactgcaggagtgtttcaattt 318 |||||| || ||||| || | ||||||||||| | |||||| ||||||||||||||||| Sbjct: 294 ccagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaattt 353 Query: 319 ggctctgaagaatggcataaaccttttcgacaccgccgactcctatggaactgggaagtt 378 ||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| | ||| Sbjct: 354 ggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggtt 413 Query: 379 gaacggccaaagcgaaaggctgctcggcaaatttatccgcgagtgccaagggccaataaa 438 ||| || || ||||||||||| ||||| |||||||||||||||| ||||||| || || Sbjct: 414 gaatggtcagagcgaaaggctcctcggtaaatttatccgcgagtatgaagggccgatgaa 473 Query: 439 atctccagacgacgtggtcatcgcaacgaagtttgccgcgtatccttggcgactaacgtc 498 || || || || ||| |||| ||||| |||||||| || ||||||||||| ||||| || Sbjct: 474 gtcccctgatgatgtgatcattgcaaccaagtttgcagcatatccttggcggctaacatc 533 Query: 499 cggccagtttgtcaacgcctgcaggtcgtcattagaaaggttacagatcgaccgtctcgg 558 ||||| ||||||| |||||||| ||| || || ||||| || ||| | || || ||||| Sbjct: 534 aggccaatttgtcagcgcctgcaagtcttctttggaaagattgcagcttgatcggctcgg 593 Query: 559 aatagggcagctgcattggtctactgccaactatgcgcctctgcaggagcgcgctctctg 618 ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 594 gataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgctctttg 653 Query: 619 ggacggtctagttgaaatgtatgacaagggtcttgtccgggccgtgggtgtgagcaatta 678 ||| ||||||||||| |||||||| |||||| | || || || || || || |||||||| Sbjct: 654 ggatggtctagttgagatgtatgaaaagggtttggttcgtgctgtcggcgtcagcaatta 713 Query: 679 cgggccgaagcagcttctgaagatccacagctacctagcatccagaggtgtccccctgag 738 ||||| |||||||||||||||||||||||| | ||| |||| |||||||| || |||| Sbjct: 714 tgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgttccattgag 773 Query: 739 ctcagctcaggtgcagttctcgctgctgagcatgggtgaggagcagatggagctgaaaac 798 |||||||||||| |||||||| || ||||||||||| || |||||||||||||||||||| Sbjct: 774 ctcagctcaggttcagttctcactactgagcatgggggatgagcagatggagctgaaaac 833 Query: 799 cgtgtgcgactctctgggcgttcgtctcatcgcttatagcccgcttgggctgggcatgct 858 ||||| || ||| ||||| ||||||| || |||||||| || ||||| | || ||||| Sbjct: 834 tgtgtgtgattctttgggcattcgtctgattgcttatagtccacttggattaggaatgct 893 Query: 859 caccgggaagtacgacgcctctaaccttccaaatgggccaagatctgtgttgttccggca 918 || || ||||| | ||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 894 gacaggaaagtatactacttctaaccttccaagtggaccaaggtctgtgttgttccggca 953 Query: 919 gattcttcctgggctggagtccctgctgtcttgcttgaagagtattgccgaccgaaaggg 978 |||||||||||| |||| || |||||| |||| |||| || ||||| || | ||||| Sbjct: 954 aattcttcctgggttggaatctctgctgacttgtctgaaaagaattgcagaaaggaaggg 1013 Query: 979 caaaaccatgtcccaggtggctataaactggtgcatttgcaaaggcgcaattccgattcc 1038 || |||||||| || ||||| ||||| |||||||| ||||| ||| ||||||| ||||| Sbjct: 1014 gaagaccatgtctcaagtggccataaattggtgcatctgcaagggcacaattcctattcc 1073 Query: 1039 cggcgtgaaaacagttagacacgtggaggacaacttgggtgcgcttggctggaggctgag 1098 || || |||||||| || ||||| ||||| |||||||| || || ||||||||||| || Sbjct: 1074 aggtgtcaaaacagtcaggcacgtcgaggataacttgggagcactgggctggaggcttag 1133 Query: 1099 ccctggtgagatctcagagctggaagccgcggcgatggagtgccccaagaaaatggttca 1158 ||||| ||| | |||||||| ||||| || || ||||||| || |||| |||||| || Sbjct: 1134 ccctgctgaagtttcagagctcgaagctgcagcaatggagtctccgaagagaatggtcca 1193 Query: 1159 gaacatatt 1167 ||||||||| Sbjct: 1194 gaacatatt 1202
>dbj|AK120676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161O11, full insert sequence Length = 1407 Score = 680 bits (343), Expect = 0.0 Identities = 858/1029 (83%), Gaps = 3/1029 (0%) Strand = Plus / Plus Query: 142 accgccgccgcctgccgccgcgctgcgcctcggaccac---tcttctggccgtgggaaaa 198 |||| ||||||||||||||||||||||| ||| || | |||||||||||||| | || Sbjct: 175 accgtcgccgcctgccgccgcgctgcgcatcgcgccgcccctcttctggccgtggcagaa 234 Query: 199 ggtgaatgttgggcccctttcagtttcccccatgggttttggaacatgggcttggggcaa 258 |||||| || || |||||||| ||||| || ||||| |||||||||||||||||||| || Sbjct: 235 ggtgaaagtcggtcccctttctgtttcgcctatggggtttggaacatgggcttgggggaa 294 Query: 259 ccagctgctctggggctacgaggaaagcatggacagtgaactgcaggagtgtttcaattt 318 |||||| || ||||| || | ||||||||||| | |||||| ||||||||||||||||| Sbjct: 295 ccagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaattt 354 Query: 319 ggctctgaagaatggcataaaccttttcgacaccgccgactcctatggaactgggaagtt 378 ||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| | ||| Sbjct: 355 ggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggtt 414 Query: 379 gaacggccaaagcgaaaggctgctcggcaaatttatccgcgagtgccaagggccaataaa 438 ||| || || ||||||||||| ||||| |||||||||||||||| ||||||| || || Sbjct: 415 gaatggtcagagcgaaaggctcctcggtaaatttatccgcgagtatgaagggccgatgaa 474 Query: 439 atctccagacgacgtggtcatcgcaacgaagtttgccgcgtatccttggcgactaacgtc 498 || || || || ||| |||| ||||| |||||||| || ||||||||||| ||||| || Sbjct: 475 gtcccctgatgatgtgatcattgcaaccaagtttgcagcatatccttggcggctaacatc 534 Query: 499 cggccagtttgtcaacgcctgcaggtcgtcattagaaaggttacagatcgaccgtctcgg 558 ||||| ||||||| |||||||| ||| || || ||||| || ||| | || || ||||| Sbjct: 535 aggccaatttgtcagcgcctgcaagtcttctttggaaagattgcagcttgatcggctcgg 594 Query: 559 aatagggcagctgcattggtctactgccaactatgcgcctctgcaggagcgcgctctctg 618 ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||| || Sbjct: 595 gataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgctctttg 654 Query: 619 ggacggtctagttgaaatgtatgacaagggtcttgtccgggccgtgggtgtgagcaatta 678 ||| ||||||||||| |||||||| |||||| | || || || || || || |||||||| Sbjct: 655 ggatggtctagttgagatgtatgaaaagggtttggttcgtgctgtcggcgtcagcaatta 714 Query: 679 cgggccgaagcagcttctgaagatccacagctacctagcatccagaggtgtccccctgag 738 ||||| |||||||||||||||||||||||| | ||| |||| |||||||| || |||| Sbjct: 715 tgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgttccattgag 774 Query: 739 ctcagctcaggtgcagttctcgctgctgagcatgggtgaggagcagatggagctgaaaac 798 |||||||||||| |||||||| || ||||||||||| || |||||||||||||||||||| Sbjct: 775 ctcagctcaggttcagttctcactactgagcatgggggatgagcagatggagctgaaaac 834 Query: 799 cgtgtgcgactctctgggcgttcgtctcatcgcttatagcccgcttgggctgggcatgct 858 ||||| || ||| ||||| ||||||| || |||||||| || ||||| | || ||||| Sbjct: 835 tgtgtgtgattctttgggcattcgtctgattgcttatagtccacttggattaggaatgct 894 Query: 859 caccgggaagtacgacgcctctaaccttccaaatgggccaagatctgtgttgttccggca 918 || || ||||| | ||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 895 gacaggaaagtatactacttctaaccttccaagtggaccaaggtctgtgttgttccggca 954 Query: 919 gattcttcctgggctggagtccctgctgtcttgcttgaagagtattgccgaccgaaaggg 978 |||||||||||| |||| || |||||| |||| |||| || ||||| || | ||||| Sbjct: 955 aattcttcctgggttggaatctctgctgacttgtctgaaaagaattgcagaaaggaaggg 1014 Query: 979 caaaaccatgtcccaggtggctataaactggtgcatttgcaaaggcgcaattccgattcc 1038 || |||||||| || ||||| ||||| |||||||| ||||| ||| ||||||| ||||| Sbjct: 1015 gaagaccatgtctcaagtggccataaattggtgcatctgcaagggcacaattcctattcc 1074 Query: 1039 cggcgtgaaaacagttagacacgtggaggacaacttgggtgcgcttggctggaggctgag 1098 || || |||||||| || ||||| ||||| |||||||| || || ||||||||||| || Sbjct: 1075 aggtgtcaaaacagtcaggcacgtcgaggataacttgggagcactgggctggaggcttag 1134 Query: 1099 ccctggtgagatctcagagctggaagccgcggcgatggagtgccccaagaaaatggttca 1158 ||||| ||| | |||||||| ||||| || || ||||||| || |||| |||||| || Sbjct: 1135 ccctgctgaagtttcagagctcgaagctgcagcaatggagtctccgaagagaatggtcca 1194 Query: 1159 gaacatatt 1167 ||||||||| Sbjct: 1195 gaacatatt 1203
>gb|DQ244297.1| Zea mays clone 4442 mRNA sequence Length = 1350 Score = 609 bits (307), Expect = e-170 Identities = 817/987 (82%) Strand = Plus / Plus Query: 152 cctgccgccgcgctgcgcctcggaccactcttctggccgtgggaaaaggtgaatgttggg 211 ||||||||||| || || ||||| || ||||||||||| |||||||||||||| | || Sbjct: 163 cctgccgccgcccttcggctcgggccgctcttctggccatgggaaaaggtgaaaatcggc 222 Query: 212 cccctttcagtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgg 271 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| || ||| Sbjct: 223 cccctttctgtttcccccatgggttttggaacatgggcatggggaaaccagctactttgg 282 Query: 272 ggctacgaggaaagcatggacagtgaactgcaggagtgtttcaatttggctctgaagaat 331 ||||| | ||||||||||||| ||||| ||||| || |||||| ||||||| | |||| Sbjct: 283 ggctatcaagaaagcatggacaacgaacttcaggattgcttcaatctggctctaaggaat 342 Query: 332 ggcataaaccttttcgacaccgccgactcctatggaactgggaagttgaacggccaaagc 391 |||||||||||||| ||||| |||||||| || |||||||| | ||||||||| || ||| Sbjct: 343 ggcataaacctttttgacactgccgactcttacggaactggaaggttgaacggacagagc 402 Query: 392 gaaaggctgctcggcaaatttatccgcgagtgccaagggccaataaaatctccagacgac 451 ||| |||| ||||| ||||| |||| |||| ||||| || ||||||||||| || Sbjct: 403 gaacggctactcggtaaattcatccttgagtttgaagggaggattaaatctccagatgat 462 Query: 452 gtggtcatcgcaacgaagtttgccgcgtatccttggcgactaacgtccggccagtttgtc 511 || ||||| ||||| |||||||| || |||||||||||||| || || || ||||||||| Sbjct: 463 gtagtcatagcaactaagtttgctgcatatccttggcgacttacatcggggcagtttgtc 522 Query: 512 aacgcctgcaggtcgtcattagaaaggttacagatcgaccgtctcggaatagggcagctg 571 | |||||||| ||| || || ||||| ||||| | || || ||||| ||||||||||| Sbjct: 523 agcgcctgcaagtcttctttggaaagattacaacttgatcggctcgggatagggcagcta 582 Query: 572 cattggtctactgccaactatgcgcctctgcaggagcgcgctctctgggacggtctagtt 631 |||||||||||||| |||||||| || ||||||||||||| |||||||| || |||||| Sbjct: 583 cattggtctactgctaactatgcacccttgcaggagcgcgccctctgggatggactagtt 642 Query: 632 gaaatgtatgacaagggtcttgtccgggccgtgggtgtgagcaattacgggccgaagcag 691 ||||||||||| ||||| ||||| | || || ||||| ||||||||||||||||||||| Sbjct: 643 gaaatgtatgaaaagggccttgtaagtgctgtcggtgtcagcaattacgggccgaagcag 702 Query: 692 cttctgaagatccacagctacctagcatccagaggtgtccccctgagctcagctcaggtg 751 |||||||||||||||||||| ||||| || ||||| || ||| |||||||||||||||| Sbjct: 703 cttctgaagatccacagctatctagcttctagaggagttcccttgagctcagctcaggtt 762 Query: 752 cagttctcgctgctgagcatgggtgaggagcagatggagctgaaaaccgtgtgcgactct 811 ||||||||| | |||||||||||||| || |||||||||||||||| ||||| || || Sbjct: 763 cagttctcgttactgagcatgggtgacgatcagatggagctgaaaagtgtgtgtgattca 822 Query: 812 ctgggcgttcgtctcatcgcttatagcccgcttgggctgggcatgctcaccgggaagtac 871 ||||| |||| ||||||| |||||||||||||| | || |||||||| |||||||| Sbjct: 823 ttgggcattcgcatcatcgcatatagcccgcttggattaggaatgctcactgggaagtat 882 Query: 872 gacgcctctaaccttccaaatgggccaagatctgtgttgttccggcagattcttcctggg 931 | || |||||||| ||||| || ||||| || ||| ||||||| || || ||||||||| Sbjct: 883 ggtgcttctaacctcccaaaaggaccaaggtcagtgctgttccgacaaatccttcctggg 942 Query: 932 ctggagtccctgctgtcttgcttgaagagtattgccgaccgaaagggcaaaaccatgtcc 991 |||||| | |||||||||||| ||| || |||||||| ||||| || |||||| | Sbjct: 943 ctggagcctctgctgtcttgcctgagaaggattgccgaaaagaaggggaagaccatgcct 1002 Query: 992 caggtggctataaactggtgcatttgcaaaggcgcaattccgattcccggcgtgaaaaca 1051 |||||||| || ||||||||||| ||||| ||| || |||| || || ||||| ||||| Sbjct: 1003 caggtggccatcaactggtgcatgtgcaagggcacagttcctatcccaggcgtcaaaacg 1062 Query: 1052 gttagacacgtggaggacaacttgggtgcgcttggctggaggctgagccctggtgagatc 1111 | || || || |||| ||| |||| ||||| ||||||||||| || ||| |||||| Sbjct: 1063 atgaggcatgtccaggagaacctgggcgcgctcggctggaggctcagttctgccgagatc 1122 Query: 1112 tcagagctggaagccgcggcgatggag 1138 || ||||| || |||| ||||||||| Sbjct: 1123 tcggagctcgagtccgcagcgatggag 1149
>gb|AY105273.1| Zea mays PCO080549 mRNA sequence Length = 560 Score = 381 bits (192), Expect = e-102 Identities = 436/516 (84%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 437 aaatctccagacgacgtggtcatcgcaacgaagtttgccgcgtatccttggcgactaacg 496 ||||||||||| || |||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 41 aaatctccagatgatgtggtcatagcaactaagtttgctgcatatccttggcgacttaca 100 Query: 497 tccggccagtttgtcaacgcctgcaggtcgtcattagaaaggttacagatcgaccgtctc 556 || || |||||||||| |||||||| ||| || || ||||| ||||| | || | ||| Sbjct: 101 tcggggcagtttgtcagcgcctgcaagtcttctttggaaagattacaacttgataggctc 160 Query: 557 ggaatagggcagctgcattggtctactgccaactatgcgcctctgcaggagcgcgctctc 616 || |||||||||||||||||||||||||| |||||||| || |||||||||| || ||| Sbjct: 161 gggatagggcagctgcattggtctactgctaactatgcacccttgcaggagcgtgccctc 220 Query: 617 tgggacggtctagttgaaatgtatgacaagggtcttgtccgggccgtgggtgtgagcaat 676 ||||| || ||||||||||||||||| ||||| ||||| | || || ||||| |||||| Sbjct: 221 tgggatggactagttgaaatgtatgaaaagggccttgtaagtgctgtcggtgtcagcaat 280 Query: 677 tacgggccgaagcagcttctgaagatccacagctacctagcatccagaggtgtccccctg 736 ||||||||||||||||||||||||||||||||||| ||||| || ||||| || ||| || Sbjct: 281 tacgggccgaagcagcttctgaagatccacagctatctagcttctagaggagt-cccttg 339 Query: 737 agctcagctcaggtgcagttctcgctgctgagcatgggtgaggagcagatggagctgaaa 796 |||||||||||||| ||||||||| | |||||||||||||| || ||||||||||||||| Sbjct: 340 agctcagctcaggttcagttctcgttactgagcatgggtgacgatcagatggagctgaaa 399 Query: 797 accgtgtgcgactctctgggcgttcgtctcatcgcttatagcccgcttgggctgggcatg 856 | ||||| || || ||||| |||| ||||||| |||||||||||||| | || ||| Sbjct: 400 agtgtgtgtgattcattgggcattcgcatcatcgcatatagcccgcttggattaggaatg 459 Query: 857 ctcaccgggaagtacgacgcctctaaccttccaaatgggccaagatctgtgttgttccgg 916 ||||| |||||||| | || |||||||| ||||| || ||||| || ||| ||||||| Sbjct: 460 ctcactgggaagtatggtgcttctaacctcccaaaaggaccaaggtcagtgctgttccga 519 Query: 917 cagattcttcctgggctggagtccctgctgtcttgc 952 || || ||||||||||||||| | |||||||||||| Sbjct: 520 caaatccttcctgggctggagcctctgctgtcttgc 555
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 224 bits (113), Expect = 6e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 198 aggtgaatgttgggcccctttcagtttcccccatgggttttggaacatgggcttggggca 257 ||||||| || || |||||||| ||||| || ||||| |||||||||||||||||||| | Sbjct: 19479982 aggtgaaagtcggtcccctttctgtttcgcctatgggatttggaacatgggcttggggga 19480041 Query: 258 accagctgctctggggctacgaggaaagcatggacagtgaactgcaggagtgtttcaatt 317 ||||||| || ||||| || | ||||||||||| | |||||| |||||||||||||||| Sbjct: 19480042 accagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaatt 19480101 Query: 318 tggctctgaagaatggcataaaccttttcgacaccgccgactcctatggaactgggaagt 377 |||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| | || Sbjct: 19480102 tggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggt 19480161 Query: 378 tgaacggccaaagcgaaaggctgctcggcaaatttatccgcgagt 422 |||| || || ||||||||||| ||||| |||||||||||||||| Sbjct: 19480162 tgaatggtcagagcgaaaggctcctcggtaaatttatccgcgagt 19480206 Score = 115 bits (58), Expect = 4e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 554 ctcggaatagggcagctgcattggtctactgccaactatgcgcctctgcaggagcgcgct 613 ||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 19480629 ctcgggataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgct 19480688 Query: 614 ctctgggacggtctagttgaaatgtatgacaagg 647 || ||||| ||||||||||| |||||||| |||| Sbjct: 19480689 ctttgggatggtctagttgagatgtatgaaaagg 19480722 Score = 111 bits (56), Expect = 6e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 992 caggtggctataaactggtgcatttgcaaaggcgcaattccgattcccggcgtgaaaaca 1051 |||||||| ||||| |||||||| ||||| ||| ||||||| ||||| || || |||||| Sbjct: 19481639 caggtggccataaattggtgcatctgcaagggcacaattcctattccaggtgtcaaaaca 19481698 Query: 1052 gttagacacgtggaggacaacttgggtgcgcttggctggaggctgagccctggtgagatc 1111 || || ||||| ||||| |||||||| || || ||||||||||| ||||||| ||| | Sbjct: 19481699 gtcaggcacgtcgaggataacttgggagcactgggctggaggcttagccctgctgaagtt 19481758 Query: 1112 tcagagctggaagccgcggcgatggagtgccccaagaaaatggttcagaacatatt 1167 |||||||| ||||| || || ||||||| || |||| |||||| ||||||||||| Sbjct: 19481759 tcagagctcgaagctgcagcaatggagtctccgaagagaatggtccagaacatatt 19481814 Score = 89.7 bits (45), Expect = 2e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 746 caggtgcagttctcgctgctgagcatgggtgaggagcagatggagctgaaaaccgtgtgc 805 ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 19481100 caggttcagttctcactactgagcatgggggatgagcagatggagctgaaaactgtgtgt 19481159 Query: 806 gactctctgggcgttcgtctcatcgcttatagcccgcttgg 846 || ||| ||||| ||||||| || |||||||| || ||||| Sbjct: 19481160 gattctttgggcattcgtctgattgcttatagtccacttgg 19481200 Score = 87.7 bits (44), Expect = 9e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 671 agcaattacgggccgaagcagcttctgaagatccacagctacctagcatccagaggtgtc 730 |||||||| ||||| |||||||||||||||||||||||| | ||| |||| |||||||| Sbjct: 19480946 agcaattatgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgtt 19481005 Query: 731 cccctgagctcagctcaggt 750 || |||||||||||||||| Sbjct: 19481006 ccattgagctcagctcaggt 19481025 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 456 tcatcgcaacgaagtttgccgcgtatccttggcgactaacgtccggccagtttgtcaacg 515 |||| ||||| |||||||| || ||||||||||| ||||| || ||||| ||||||| || Sbjct: 19480348 tcattgcaaccaagtttgcagcatatccttggcggctaacatcaggccaatttgtcagcg 19480407 Query: 516 cctgca 521 |||||| Sbjct: 19480408 cctgca 19480413 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 902 tctgtgttgttccggcagattcttcctgggctggagtccctgctgtcttg 951 ||||||||||||||||| |||||||||||| |||| || |||||| |||| Sbjct: 19481354 tctgtgttgttccggcaaattcttcctgggttggaatctctgctgacttg 19481403 Score = 48.1 bits (24), Expect = 0.081 Identities = 27/28 (96%) Strand = Plus / Plus Query: 142 accgccgccgcctgccgccgcgctgcgc 169 |||| ||||||||||||||||||||||| Sbjct: 19478809 accgtcgccgcctgccgccgcgctgcgc 19478836 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 2656429 ccgccgccgcctgccgccgcgc 2656450
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 224 bits (113), Expect = 6e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 198 aggtgaatgttgggcccctttcagtttcccccatgggttttggaacatgggcttggggca 257 ||||||| || || |||||||| ||||| || ||||| |||||||||||||||||||| | Sbjct: 107848 aggtgaaagtcggtcccctttctgtttcgcctatgggatttggaacatgggcttggggga 107907 Query: 258 accagctgctctggggctacgaggaaagcatggacagtgaactgcaggagtgtttcaatt 317 ||||||| || ||||| || | ||||||||||| | |||||| |||||||||||||||| Sbjct: 107908 accagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaatt 107967 Query: 318 tggctctgaagaatggcataaaccttttcgacaccgccgactcctatggaactgggaagt 377 |||||||||||||||||||||||||||| ||||| || ||||| ||||||||||| | || Sbjct: 107968 tggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggt 108027 Query: 378 tgaacggccaaagcgaaaggctgctcggcaaatttatccgcgagt 422 |||| || || ||||||||||| ||||| |||||||||||||||| Sbjct: 108028 tgaatggtcagagcgaaaggctcctcggtaaatttatccgcgagt 108072 Score = 115 bits (58), Expect = 4e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 554 ctcggaatagggcagctgcattggtctactgccaactatgcgcctctgcaggagcgcgct 613 ||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 108495 ctcgggataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgct 108554 Query: 614 ctctgggacggtctagttgaaatgtatgacaagg 647 || ||||| ||||||||||| |||||||| |||| Sbjct: 108555 ctttgggatggtctagttgagatgtatgaaaagg 108588 Score = 111 bits (56), Expect = 6e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 992 caggtggctataaactggtgcatttgcaaaggcgcaattccgattcccggcgtgaaaaca 1051 |||||||| ||||| |||||||| ||||| ||| ||||||| ||||| || || |||||| Sbjct: 109505 caggtggccataaattggtgcatctgcaagggcacaattcctattccaggtgtcaaaaca 109564 Query: 1052 gttagacacgtggaggacaacttgggtgcgcttggctggaggctgagccctggtgagatc 1111 || || ||||| ||||| |||||||| || || ||||||||||| ||||||| ||| | Sbjct: 109565 gtcaggcacgtcgaggataacttgggagcactgggctggaggcttagccctgctgaagtt 109624 Query: 1112 tcagagctggaagccgcggcgatggagtgccccaagaaaatggttcagaacatatt 1167 |||||||| ||||| || || ||||||| || |||| |||||| ||||||||||| Sbjct: 109625 tcagagctcgaagctgcagcaatggagtctccgaagagaatggtccagaacatatt 109680 Score = 89.7 bits (45), Expect = 2e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 746 caggtgcagttctcgctgctgagcatgggtgaggagcagatggagctgaaaaccgtgtgc 805 ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 108966 caggttcagttctcactactgagcatgggggatgagcagatggagctgaaaactgtgtgt 109025 Query: 806 gactctctgggcgttcgtctcatcgcttatagcccgcttgg 846 || ||| ||||| ||||||| || |||||||| || ||||| Sbjct: 109026 gattctttgggcattcgtctgattgcttatagtccacttgg 109066 Score = 87.7 bits (44), Expect = 9e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 671 agcaattacgggccgaagcagcttctgaagatccacagctacctagcatccagaggtgtc 730 |||||||| ||||| |||||||||||||||||||||||| | ||| |||| |||||||| Sbjct: 108812 agcaattatgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgtt 108871 Query: 731 cccctgagctcagctcaggt 750 || |||||||||||||||| Sbjct: 108872 ccattgagctcagctcaggt 108891 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 456 tcatcgcaacgaagtttgccgcgtatccttggcgactaacgtccggccagtttgtcaacg 515 |||| ||||| |||||||| || ||||||||||| ||||| || ||||| ||||||| || Sbjct: 108214 tcattgcaaccaagtttgcagcatatccttggcggctaacatcaggccaatttgtcagcg 108273 Query: 516 cctgca 521 |||||| Sbjct: 108274 cctgca 108279 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 902 tctgtgttgttccggcagattcttcctgggctggagtccctgctgtcttg 951 ||||||||||||||||| |||||||||||| |||| || |||||| |||| Sbjct: 109220 tctgtgttgttccggcaaattcttcctgggttggaatctctgctgacttg 109269 Score = 48.1 bits (24), Expect = 0.081 Identities = 27/28 (96%) Strand = Plus / Plus Query: 142 accgccgccgcctgccgccgcgctgcgc 169 |||| ||||||||||||||||||||||| Sbjct: 106675 accgtcgccgcctgccgccgcgctgcgc 106702
>ref|NM_124738.2| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase (AT5G53580) mRNA, complete cds Length = 1299 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Plus Query: 221 gtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgggg 273 ||||| || ||||||||||| |||||||||||||| || ||||| || ||||| Sbjct: 204 gtttctcctatgggttttgggacatgggcttggggtaatcagcttctttgggg 256
>gb|BT012653.1| Arabidopsis thaliana At5g53580 gene, complete cds Length = 1098 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Plus Query: 221 gtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgggg 273 ||||| || ||||||||||| |||||||||||||| || ||||| || ||||| Sbjct: 139 gtttctcctatgggttttgggacatgggcttggggtaatcagcttctttgggg 191
>dbj|AK221481.1| Arabidopsis thaliana mRNA for aldo/keto reductase-like protein, complete cds, clone: RAFL07-43-L22 Length = 1271 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Plus Query: 221 gtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgggg 273 ||||| || ||||||||||| |||||||||||||| || ||||| || ||||| Sbjct: 199 gtttctcctatgggttttgggacatgggcttggggtaatcagcttctttgggg 251
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6 Length = 82952 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Minus Query: 221 gtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgggg 273 ||||| || ||||||||||| |||||||||||||| || ||||| || ||||| Sbjct: 52930 gtttctcctatgggttttgggacatgggcttggggtaatcagcttctttgggg 52878
>emb|BX830085.1|CNS0A1A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1270 Score = 50.1 bits (25), Expect = 0.020 Identities = 46/53 (86%) Strand = Plus / Plus Query: 221 gtttcccccatgggttttggaacatgggcttggggcaaccagctgctctgggg 273 ||||| || ||||||||||| |||||||||||||| || ||||| || ||||| Sbjct: 190 gtttctcctatgggttttgggacatgggcttggggtaatcagcttctttgggg 242
>gb|AC189020.1| Gallus gallus chromosome Z clone CH261-179F4, complete sequence Length = 165403 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Plus Query: 309 gtttcaatttggctctgaagaatggca 335 ||||||||||||| ||||||||||||| Sbjct: 76567 gtttcaatttggcactgaagaatggca 76593
>gb|AC186384.2| Pan troglodytes BAC clone CH251-680J1 from chromosome 14, complete sequence Length = 215740 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 211094 aggagcagatggagctgaaaacc 211116
>gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, complete sequence Length = 151504 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 84072 aggagcagatggagctgaaaacc 84094
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 tcaccgccgccgcctgccgccgc 162 ||||||||||||||||||||||| Sbjct: 24686045 tcaccgccgccgcctgccgccgc 24686067 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 30547614 ccgccgccgcctgccgccgcgc 30547593 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 12495356 caccgccgccgcctgccgccg 12495376
>gb|AY182007.1| Monoblepharella sp. JEL15 mitochondrion, complete genome Length = 60432 Score = 46.1 bits (23), Expect = 0.32 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 tgggcccctttcagtttcccccatggg 234 |||||||||||||| |||||||||||| Sbjct: 25802 tgggcccctttcagattcccccatggg 25776
>emb|AL732604.5| Human DNA sequence from clone RP11-27G9 on chromosome X Contains a SET translocation (myeloid leukemia-associated) (SET) pseudogene, complete sequence Length = 166517 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 49711 aggagcagatggagctgaaaacc 49689
>emb|AL627233.9| Human DNA sequence from clone RP11-305I2 on chromosome X Contains the CYLC1 gene for cylicin, basic protein of sperm head cytoskeleton 1, complete sequence Length = 75523 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 190 aggagcagatggagctgaaaacc 168
>emb|AL159987.19| Human DNA sequence from clone RP11-167P23 on chromosome X Contains two novel genes, a forkhead box N1 (FOXN1) pseudogene and the 5' end of the RRAGB gene for Ras-related GTP binding B, complete sequence Length = 119024 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 68484 aggagcagatggagctgaaaacc 68462
>emb|AL158143.14| Human DNA sequence from clone RP5-1074I8 on chromosome X, complete sequence Length = 27063 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 25253 aggagcagatggagctgaaaacc 25231
>gb|AY189988.1| Pan paniscus clone BoCh-1639 LINE-1 element Length = 6057 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 1170 aggagcagatggagctgaaaacc 1192
>gb|AC073541.4| Homo sapiens chromosome 19 clone RP11-21H14, complete sequence Length = 176941 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 777 aggagcagatggagctgaaaacc 799 ||||||||||||||||||||||| Sbjct: 123167 aggagcagatggagctgaaaacc 123189
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 tcaccgccgccgcctgccgccgc 162 ||||||||||||||||||||||| Sbjct: 19726 tcaccgccgccgcctgccgccgc 19748
>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0040H10 Length = 173301 Score = 46.1 bits (23), Expect = 0.32 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 tcaccgccgccgcctgccgccgc 162 ||||||||||||||||||||||| Sbjct: 169238 tcaccgccgccgcctgccgccgc 169260
>emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chromosome 13, complete sequence Length = 239180 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1090 gaggctgagccctggtgagatc 1111 |||||||||||||||||||||| Sbjct: 75019 gaggctgagccctggtgagatc 75040
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 233 ggttttggaacatgggcttggggcaa 258 ||||||||||| |||||||||||||| Sbjct: 1834664 ggttttggaacttgggcttggggcaa 1834639
>gb|AC137746.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0030J05, complete sequence Length = 147352 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 127603 ccgccgccgcctgccgccgcgc 127582
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 12628755 ccgccgccgcctgccgccgcgc 12628734
>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence Length = 185904 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 159309 ccgccgccgcctgccgccgcgc 159330
>emb|AL591644.14| Human DNA sequence from clone RP11-443B9 on chromosome 9 Contains a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1) pseudogene, complete sequence Length = 97747 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 actccctctctccctgccctcc 45 |||||||||||||||||||||| Sbjct: 68338 actccctctctccctgccctcc 68359
>gb|AC154223.1| Mus musculus BAC clone RP24-138G21 from chromosome 13, complete sequence Length = 153042 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1090 gaggctgagccctggtgagatc 1111 |||||||||||||||||||||| Sbjct: 9247 gaggctgagccctggtgagatc 9268
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccgccgccgcctgccgccgcgc 164 |||||||||||||||||||||| Sbjct: 46177 ccgccgccgcctgccgccgcgc 46156
>gb|AC010505.6|AC010505 Homo sapiens chromosome 19 clone LLNLF-119C9, complete sequence Length = 39443 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 gcccctttcagtttcccccatg 232 |||||||||||||||||||||| Sbjct: 30903 gcccctttcagtttcccccatg 30924
>emb|CT829911.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA018D11, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cgccgccgcctgccgccgcgc 164 ||||||||||||||||||||| Sbjct: 138 cgccgccgcctgccgccgcgc 118
>emb|CR855147.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148A10, complete sequence Length = 96027 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cgccgccgcctgccgccgcgc 164 ||||||||||||||||||||| Sbjct: 16593 cgccgccgcctgccgccgcgc 16573
>ref|NM_001064056.1| Oryza sativa (japonica cultivar-group) Os06g0324000 (Os06g0324000) mRNA, complete cds Length = 1304 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 78 caccgccgccgcctgccgccg 58
>ref|NM_001060473.1| Oryza sativa (japonica cultivar-group) Os04g0625200 (Os04g0625200) mRNA, complete cds Length = 879 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cgccgccgcctgccgccgcgc 164 ||||||||||||||||||||| Sbjct: 75 cgccgccgcctgccgccgcgc 55
>gb|AC187349.2| Rhesus macaque BAC clone CH250-51H12 from chromosome unknown, complete sequence Length = 183522 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1234 gcaggttgctttctcttctgtgcct 1258 ||||||||||||||||| ||||||| Sbjct: 27384 gcaggttgctttctcttttgtgcct 27360
>ref|XM_001118826.1| PREDICTED: Macaca mulatta similar to ETS domain-containing protein Elk-1 (ELK1), partial mRNA Length = 979 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1106 gagatctcagagctggaagccgcgg 1130 |||||||||| |||||||||||||| Sbjct: 917 gagatctcagggctggaagccgcgg 893
>ref|XR_010957.1| PREDICTED: Macaca mulatta similar to ETS domain-containing protein Elk-1 (LOC701980), mRNA Length = 2380 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1106 gagatctcagagctggaagccgcgg 1130 |||||||||| |||||||||||||| Sbjct: 671 gagatctcagggctggaagccgcgg 647
>gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, complete sequence Length = 184760 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1246 ctcttctgtgcctagttcagagttc 1270 |||| |||||||||||||||||||| Sbjct: 152113 ctctcctgtgcctagttcagagttc 152089
>gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, complete sequence Length = 207359 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1246 ctcttctgtgcctagttcagagttc 1270 |||| |||||||||||||||||||| Sbjct: 3837 ctctcctgtgcctagttcagagttc 3813
>gb|AC018712.5| Homo sapiens BAC clone RP11-343H10 from 2, complete sequence Length = 156833 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1223 ataagagcagagcaggttgct 1243 ||||||||||||||||||||| Sbjct: 128780 ataagagcagagcaggttgct 128760
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cgccgccgcctgccgccgcgc 164 ||||||||||||||||||||| Sbjct: 31820646 cgccgccgcctgccgccgcgc 31820626
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 tcgtcaccgccgccgcctgcc 157 ||||||||||||||||||||| Sbjct: 293245 tcgtcaccgccgccgcctgcc 293225
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1090 gaggctgagccctggtgagat 1110 ||||||||||||||||||||| Sbjct: 180925 gaggctgagccctggtgagat 180905
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 cgccgccgcctgccgccgcgc 164 ||||||||||||||||||||| Sbjct: 153916 cgccgccgcctgccgccgcgc 153896
>gb|AC119427.3| Homo sapiens chromosome 1 clone RP11-27G14, complete sequence Length = 181148 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1104 gtgagatctcagagctggaag 1124 ||||||||||||||||||||| Sbjct: 153540 gtgagatctcagagctggaag 153520
>dbj|AP004750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0421H01 Length = 142638 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 69090 caccgccgccgcctgccgccg 69110
>dbj|AK109614.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G10, full insert sequence Length = 1304 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 78 caccgccgccgcctgccgccg 58
>gb|AC152169.2| Mus musculus BAC clone RP23-79L13 from chromosome 14, complete sequence Length = 236748 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ctccctctctccctgccctcc 45 ||||||||||||||||||||| Sbjct: 33820 ctccctctctccctgccctcc 33840
>emb|AJ416556.1|CRE416556 Chlamydomonas reinhardtii phot gene for putative blue light receptor, exons 1-13 Length = 10656 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 2685 caccgccgccgcctgccgccg 2665
>gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, complete sequence Length = 210342 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1086 gctggaggctgagccctggtg 1106 ||||||||||||||||||||| Sbjct: 79617 gctggaggctgagccctggtg 79637
>ref|NM_010430.1| Mus musculus hypermethylated in cancer 1 (Hic1), mRNA Length = 3491 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 1061 caccgccgccgcctgccgccg 1081
>gb|AF036582.1|AF036582 Mus musculus hypermethylated in cancer 1 (Hic1) gene, complete cds Length = 6306 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 3447 caccgccgccgcctgccgccg 3467
>gb|AF036334.1|AF036334 Mus musculus hypermethylated in cancer 1 (Hic1) mRNA, partial cds Length = 3030 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 595 caccgccgccgcctgccgccg 615
>emb|AL603905.19| Mouse DNA sequence from clone RP23-143A14 on chromosome 11 Contains the 3' end of a novel gene, the Hic1 gene for hypermethylated in cancer 1, a novel gene, the gene for the ortholog of human candidate tumor suppressor in ovarian cancer 2 OVCA2, the Dph2l1 gene for DPH2-like 1 (S. cerevisiae), the Rtn4rl1 gene for reticulon 4 receptor-like 1 and two CpG islands, complete sequence Length = 209782 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 caccgccgccgcctgccgccg 161 ||||||||||||||||||||| Sbjct: 86693 caccgccgccgcctgccgccg 86673
>emb|CT030724.7| Mouse DNA sequence from clone RP24-63K13 on chromosome 9, complete sequence Length = 155546 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1155 ttcagaacatatttcagacca 1175 ||||||||||||||||||||| Sbjct: 81525 ttcagaacatatttcagacca 81545
>emb|AL845492.10| Mouse DNA sequence from clone RP23-222P7 on chromosome 2, complete sequence Length = 225684 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1242 ctttctcttctgtgcctagtt 1262 ||||||||||||||||||||| Sbjct: 112733 ctttctcttctgtgcctagtt 112713
>dbj|D14485.1|MUSDBPA Mouse mRNA for dbpA murine homologue, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 5.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 gccgccgcctgccgccgcgctgcgc 169 |||||||||||||||||||| |||| Sbjct: 57 gccgccgcctgccgccgcgccgcgc 81
>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence Length = 207088 Score = 42.1 bits (21), Expect = 5.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1155 ttcagaacatatttcagacca 1175 ||||||||||||||||||||| Sbjct: 17565 ttcagaacatatttcagacca 17585 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 210,386,342 Number of extensions: 11287154 Number of successful extensions: 264807 Number of sequences better than 10.0: 61 Number of HSP's gapped: 264803 Number of HSP's successfully gapped: 83 Length of query: 1309 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1286 Effective length of database: 18,503,978,556 Effective search space: 23796116423016 Effective search space used: 23796116423016 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)