ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111m17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001049073.1| Oryza sativa (japonica cultivar-group) Os01g0238600 (Os01g0238600) mRNA, complete cds Length = 852 Score = 270 bits (136), Expect = 8e-69 Identities = 312/367 (85%), Gaps = 4/367 (1%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||||||| Sbjct: 313 atcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaacgag 372 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 ||||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||| Sbjct: 373 caagttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatg 432 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacct 486 ||||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 433 ttcaaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacct 492 Query: 487 gccagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaac 546 |||||||||||||| || || || ||||||||||| | ||||||||| ||| |||||||| Sbjct: 493 gccagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaac 552 Query: 547 gtggctgagtaattgttgaagtttccgtgccttttcccgccataaaaacgaagcattatg 606 ||| | |||||||||| | | || || |||| || ||||||| || ||||||| ||| Sbjct: 553 gtgaccgagtaattgtcgttgatt-cgccccttcccctgccataacaaggaagcatgatg 611 Query: 607 aat--gaatattatcaagcctttg-gtaagcttgtttatttcttatggtggtagtagata 663 | | ||||||||| || |||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 612 actgagaatattatgaaccctttgcctaagcatgtttatttggtatggtggtagtagata 671 Query: 664 agatcaa 670 ||||||| Sbjct: 672 agatcaa 678 Score = 127 bits (64), Expect = 7e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 145 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 204 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 157 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 216 Query: 205 accaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||| |||||||||||||| |||||||||||| ||||||| Sbjct: 217 accagcggccacaccctcaccgtcaaggtcgtcagcgcca 256 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 752 ctgcttgtattgctgttgtaatggaacaagctcag 786 |||| |||||||||| ||| ||||||||||||||| Sbjct: 743 ctgcctgtattgctgctgtgatggaacaagctcag 777
>dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D04, full insert sequence Length = 854 Score = 270 bits (136), Expect = 8e-69 Identities = 312/367 (85%), Gaps = 4/367 (1%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||||||| Sbjct: 314 atcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaacgag 373 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 ||||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||| Sbjct: 374 caagttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatg 433 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacct 486 ||||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 434 ttcaaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacct 493 Query: 487 gccagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaac 546 |||||||||||||| || || || ||||||||||| | ||||||||| ||| |||||||| Sbjct: 494 gccagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaac 553 Query: 547 gtggctgagtaattgttgaagtttccgtgccttttcccgccataaaaacgaagcattatg 606 ||| | |||||||||| | | || || |||| || ||||||| || ||||||| ||| Sbjct: 554 gtgaccgagtaattgtcgttgatt-cgccccttcccctgccataacaaggaagcatgatg 612 Query: 607 aat--gaatattatcaagcctttg-gtaagcttgtttatttcttatggtggtagtagata 663 | | ||||||||| || |||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 613 actgagaatattatgaaccctttgcctaagcatgtttatttggtatggtggtagtagata 672 Query: 664 agatcaa 670 ||||||| Sbjct: 673 agatcaa 679 Score = 127 bits (64), Expect = 7e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 145 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 204 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 158 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 217 Query: 205 accaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||| |||||||||||||| |||||||||||| ||||||| Sbjct: 218 accagcggccacaccctcaccgtcaaggtcgtcagcgcca 257 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 752 ctgcttgtattgctgttgtaatggaacaagctcag 786 |||| |||||||||| ||| ||||||||||||||| Sbjct: 744 ctgcctgtattgctgctgtgatggaacaagctcag 778
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 202 bits (102), Expect = 1e-48 Identities = 257/305 (84%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 369 agttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgtt 428 ||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||||| Sbjct: 7671257 agttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatgtt 7671316 Query: 429 caaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacctgc 488 ||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 7671317 caaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacctgc 7671376 Query: 489 cagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaacgt 548 |||||||||||| || || || ||||||||||| | ||||||||| ||| |||||||||| Sbjct: 7671377 cagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaacgt 7671436 Query: 549 ggctgagtaattgttgaagtttccgtgccttttcccgccataaaaacgaagcattatgaa 608 | | |||||||||| | | || || |||| || ||||||| || ||||||| |||| Sbjct: 7671437 gaccgagtaattgtcgttgatt-cgccccttcccctgccataacaaggaagcatgatgac 7671495 Query: 609 t--gaatattatcaagcctttg-gtaagcttgtttatttcttatggtggtagtagataag 665 | ||||||||| || |||||| ||||| ||||||||| ||||||||||||||||||| Sbjct: 7671496 tgagaatattatgaaccctttgcctaagcatgtttatttggtatggtggtagtagataag 7671555 Query: 666 atcaa 670 ||||| Sbjct: 7671556 atcaa 7671560 Score = 127 bits (64), Expect = 7e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 145 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 204 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 7669227 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 7669286 Query: 205 accaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||| |||||||||||||| |||||||||||| ||||||| Sbjct: 7669287 accagcggccacaccctcaccgtcaaggtcgtcagcgcca 7669326 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 163 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 222 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 31633542 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 31633483 Query: 223 atcgtcaaggt 233 ||| |||||| Sbjct: 31633482 gtcgccaaggt 31633472 Score = 71.9 bits (36), Expect = 4e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||||||| Sbjct: 7669383 atcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaacgag 7669442 Query: 367 caag 370 |||| Sbjct: 7669443 caag 7669446 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 406 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 31632392 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 31632334 Score = 54.0 bits (27), Expect = 8e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 365 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 31633398 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 31633340 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 752 ctgcttgtattgctgttgtaatggaacaagctcag 786 |||| |||||||||| ||| ||||||||||||||| Sbjct: 7671625 ctgcctgtattgctgctgtgatggaacaagctcag 7671659
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 202 bits (102), Expect = 1e-48 Identities = 257/305 (84%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 369 agttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgtt 428 ||||||| |||||||| |||||||||||| ||| |||||||||| ||||| |||||||| Sbjct: 81833 agttgacttgttgaagcctggtgctacagtgatcatgcgcaatgccaaaatcgacatgtt 81892 Query: 429 caaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacctgc 488 ||||| || ||||||||||| ||||||||||||||| | |||| |||||||||||||| Sbjct: 81893 caaaggctcaatgaggcttgcggtggacaagtgggggcgtatagaggctacagaacctgc 81952 Query: 489 cagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaacgt 548 |||||||||||| || || || ||||||||||| | ||||||||| ||| |||||||||| Sbjct: 81953 cagctttactgttaaggaggacaacaacttgtcactagtagagtatgagttggttaacgt 82012 Query: 549 ggctgagtaattgttgaagtttccgtgccttttcccgccataaaaacgaagcattatgaa 608 | | |||||||||| | | || || |||| || ||||||| || ||||||| |||| Sbjct: 82013 gaccgagtaattgtcgttgatt-cgccccttcccctgccataacaaggaagcatgatgac 82071 Query: 609 t--gaatattatcaagcctttg-gtaagcttgtttatttcttatggtggtagtagataag 665 | ||||||||| || |||||| ||||| ||||||||| ||||||||||||||||||| Sbjct: 82072 tgagaatattatgaaccctttgcctaagcatgtttatttggtatggtggtagtagataag 82131 Query: 666 atcaa 670 ||||| Sbjct: 82132 atcaa 82136 Score = 127 bits (64), Expect = 7e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 145 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 204 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 79803 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 79862 Query: 205 accaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||| |||||||||||||| |||||||||||| ||||||| Sbjct: 79863 accagcggccacaccctcaccgtcaaggtcgtcagcgcca 79902 Score = 71.9 bits (36), Expect = 4e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||||||| Sbjct: 79959 atcgcggagtgcctcatcggcgacgagaccggcgccatcgtcttcaccgcccgcaacgag 80018 Query: 367 caag 370 |||| Sbjct: 80019 caag 80022 Score = 46.1 bits (23), Expect = 0.21 Identities = 32/35 (91%) Strand = Plus / Plus Query: 752 ctgcttgtattgctgttgtaatggaacaagctcag 786 |||| |||||||||| ||| ||||||||||||||| Sbjct: 82201 ctgcctgtattgctgctgtgatggaacaagctcag 82235
>gb|DQ244338.1| Zea mays clone 5135 mRNA sequence Length = 825 Score = 159 bits (80), Expect = 2e-35 Identities = 206/248 (83%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| || |||||||| ||| |||| | || ||||||||||||||| Sbjct: 303 atcgccgagtgcctcgtcggggacgagaccggcgtcatcgtattcaccgcccgcaacgac 362 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 |||||||| || ||||| | | ||| || | |||||||||||||| ||||| |||||| Sbjct: 363 caagttgatttgctgaagcccgatgccacggtgatcttgcgcaatgccaaaatcgacatg 422 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacct 486 ||||||| || ||||||||||| |||||||| |||||| || | || |||||||| || Sbjct: 423 ttcaaaggatcaatgaggcttgcagtggacaaatgggggcggattgaggctacagagcca 482 Query: 487 gccagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaac 546 |||||||| || ||||| ||||| ||||||||||| | |||||||| || |||||||| Sbjct: 483 gccagcttcacagtgaaggaagacaacaacttgtcccttgtagagtatgaattggttaac 542 Query: 547 gtggctga 554 |||||||| Sbjct: 543 gtggctga 550 Score = 111 bits (56), Expect = 4e-21 Identities = 103/118 (87%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 130 gcggcggcgcagggcgg---cgagaagccggcgctcaggaagcctgtgttcgtcaaggtg 186 |||||||| |||||||| ||| |||||||||||| ||||||| || ||| |||||| Sbjct: 123 gcggcggcacagggcggtagcgacaagccggcgctccggaagcccgtcttcaccaaggtc 182 Query: 187 gaccagctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||||| Sbjct: 183 gaccagctcaagccgggcactaacgggcacaccctcaccgtcaaggtcgtcagcgcca 240
>ref|NM_001061547.1| Oryza sativa (japonica cultivar-group) Os05g0244600 (Os05g0244600) mRNA, complete cds Length = 678 Score = 159 bits (80), Expect = 2e-35 Identities = 104/112 (92%) Strand = Plus / Plus Query: 131 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 190 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 100 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 159 Query: 191 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgc 242 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 160 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgc 211 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct: 279 atcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaacgag 338 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 ||||| ||| || ||| | | || |||||| |||||||| ||||| | ||| || ||| Sbjct: 339 caagtggacatgctgatgccaggaaatacagcaatcttgcggaatgcgagaatcgatatg 398 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 ||||| | || ||||||||||| || ||||||||||| Sbjct: 399 ttcaagggctcaatgaggcttgctgtcgacaagtgggg 436
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 159 bits (80), Expect = 2e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 131 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 190 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 14519 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 14460 Query: 191 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgc 242 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 14459 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgc 14408 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct: 14340 atcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaacgag 14281 Query: 367 caag 370 |||| Sbjct: 14280 caag 14277 Score = 48.1 bits (24), Expect = 0.052 Identities = 60/72 (83%) Strand = Plus / Minus Query: 393 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 452 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 10388 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 10329 Query: 453 ggacaagtgggg 464 ||||||||||| Sbjct: 10328 cgacaagtgggg 10317
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 159 bits (80), Expect = 2e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 131 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 190 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 90500 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 90441 Query: 191 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgc 242 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 90440 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgc 90389 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct: 90321 atcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaacgag 90262 Query: 367 caag 370 |||| Sbjct: 90261 caag 90258 Score = 48.1 bits (24), Expect = 0.052 Identities = 60/72 (83%) Strand = Plus / Minus Query: 393 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 452 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 86369 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 86310 Query: 453 ggacaagtgggg 464 ||||||||||| Sbjct: 86309 cgacaagtgggg 86298
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 159 bits (80), Expect = 2e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 131 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 190 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 8682077 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 8682018 Query: 191 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgc 242 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 8682017 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgc 8681966 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct: 8681898 atcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaacgag 8681839 Query: 367 caag 370 |||| Sbjct: 8681838 caag 8681835 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 40197 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 40140 Score = 48.1 bits (24), Expect = 0.052 Identities = 60/72 (83%) Strand = Plus / Minus Query: 393 tacagccatcttgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgt 452 |||||| |||||||| ||||| | ||| || |||||||| | || ||||||||||| || Sbjct: 8677946 tacagcaatcttgcggaatgcgagaatcgatatgttcaagggctcaatgaggcttgctgt 8677887 Query: 453 ggacaagtgggg 464 ||||||||||| Sbjct: 8677886 cgacaagtgggg 8677875
>dbj|AK073979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033077H09, full insert sequence Length = 679 Score = 159 bits (80), Expect = 2e-35 Identities = 104/112 (92%) Strand = Plus / Plus Query: 131 cggcggcgcagggcggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggacc 190 |||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 101 cggcggcgaagggcggagagaagccggcgctgaggaagccggtgttcgtcaaggtggacc 160 Query: 191 agctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgagcgc 242 ||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct: 161 agctcaagccgggcacctgcggccacaccctcaccgtcaaggtcgtcagcgc 212 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| ||||||||||| || |||| |||| |||||||||||||| Sbjct: 280 atcgccgagtgcctcgtcggcgacgagaccggggtcatcgtcttcaccgcccgcaacgag 339 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 ||||| ||| || ||| | | || |||||| |||||||| ||||| | ||| || ||| Sbjct: 340 caagtggacatgctgatgccaggaaatacagcaatcttgcggaatgcgagaatcgatatg 399 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 ||||| | || ||||||||||| || ||||||||||| Sbjct: 400 ttcaagggctcaatgaggcttgctgtcgacaagtgggg 437
>gb|AY108146.1| Zea mays PCO079748 mRNA sequence Length = 836 Score = 159 bits (80), Expect = 2e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| || |||||||| ||| ||||| |||| ||||||||||||||| Sbjct: 234 atcgccgagtgcctcgtcggggacgagaccggcgccatcgtcttcaccgcccgcaacgac 293 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 ||||||||| || ||||| | ||| |||| |||||||||||||| ||||| |||||| Sbjct: 294 caagttgacttgctgaagcccaatgcgacagtgatcttgcgcaatgccaaaatagacatg 353 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacct 486 ||||||| || ||||||||||| ||||||||||||||| || | || ||| ||| || Sbjct: 354 ttcaaaggatcaatgaggcttgcagtggacaagtgggggcggattgaggctgtagagcca 413 Query: 487 gccagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaac 546 ||||| || || ||||| ||||| |||||| |||| | | ||||||| || ||||||| Sbjct: 414 gccagtttcacggtgaaggaagacaacaacctgtctctaatagagtatgaattggttaat 473 Query: 547 gtggctgagtaa 558 |||||||||||| Sbjct: 474 gtggctgagtaa 485 Score = 125 bits (63), Expect = 3e-25 Identities = 113/129 (87%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 119 cgatgtcgacagcggcggcgcagggcggc---gagaagccggcgctcaggaagcctgtgt 175 ||||||| ||||||||||||||||||||| || |||||||||||| ||| ||| || | Sbjct: 43 cgatgtccacagcggcggcgcagggcggcagcgacaagccggcgctccggaggcccgtct 102 Query: 176 tcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctcatcgtcaaggtcg 235 || |||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 103 tcaccaaggtcgaccagctcaggccgggcaccaacgggcacaccctcaccgtcaaggtcg 162 Query: 236 tgagcgcca 244 | ||||||| Sbjct: 163 tcagcgcca 171
>gb|AY104721.1| Zea mays PCO105901 mRNA sequence Length = 1144 Score = 135 bits (68), Expect = 3e-28 Identities = 204/248 (82%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||||| || || ||||| ||| |||| | || ||||||||||||||| Sbjct: 152 atcgccgagtgcctcgtcggaga-gagaccggcgtcatcgtattcaccgcccgcaacgac 210 Query: 367 caagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatg 426 |||||||| || ||||| | | || || | |||||||||||||| ||||| |||||| Sbjct: 211 caagttgatttgctgaagcccgaggccacggtgatcttgcgcaatgccaaaatcgacatg 270 Query: 427 ttcaaagcttcgatgaggcttgccgtggacaagtgggggagggtagaagctacagaacct 486 ||||||| || ||||||||||| |||||||| |||||| || | || |||||||| || Sbjct: 271 ttcaaaggatcaatgaggcttgcagtggacaaatgggggcggattgaggctacagagcca 330 Query: 487 gccagctttactgtgaatgaagagaacaacttgtcgcaagtagagtacgagctggttaac 546 |||||||| || ||||| ||||| ||||||||||| | |||||||| || |||||||| Sbjct: 331 gccagcttcacagtgaaggaagacaacaacttgtcccttgtagagtatgaattggttaac 390 Query: 547 gtggctga 554 |||||||| Sbjct: 391 gtggctga 398 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 180 caaggtggaccagctcaagccgggcaccaacggccacaccctcatcgtcaaggtcgtgag 239 |||||| |||||||||||||||||||| ||||| |||||||||| |||||||||||| || Sbjct: 25 caaggtcgaccagctcaagccgggcactaacgggcacaccctcaccgtcaaggtcgtcag 84 Query: 240 cgcca 244 ||||| Sbjct: 85 cgcca 89
>emb|CT834391.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA013C23, full insert sequence Length = 335 Score = 127 bits (64), Expect = 7e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 145 ggcgagaagccggcgctcaggaagcctgtgttcgtcaaggtggaccagctcaagccgggc 204 ||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| | Sbjct: 158 ggcgagaagccggcgctgaggaagccggtgttcaccaaggtcgaccagctcaagccggtc 217 Query: 205 accaacggccacaccctcatcgtcaaggtcgtgagcgcca 244 |||| |||||||||||||| |||||||||||| ||||||| Sbjct: 218 accagcggccacaccctcaccgtcaaggtcgtcagcgcca 257
>ref|NM_001050812.1| Oryza sativa (japonica cultivar-group) Os01g0754100 (Os01g0754100) mRNA, complete cds Length = 866 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 163 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 222 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 78 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 137 Query: 223 atcgtcaaggt 233 ||| |||||| Sbjct: 138 gtcgccaaggt 148 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 222 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacgag 281 Query: 367 caagttgacctgttgaaggctg 388 || ||||||||| ||||||||| Sbjct: 282 caggttgacctgatgaaggctg 303 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 406 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 321 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 379
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 163 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 222 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 47274 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 47215 Query: 223 atcgtcaaggt 233 ||| |||||| Sbjct: 47214 gtcgccaaggt 47204 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 406 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 46124 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 46066 Score = 54.0 bits (27), Expect = 8e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 365 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 47130 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 47072
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 163 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 222 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 146565 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 146506 Query: 223 atcgtcaaggt 233 ||| |||||| Sbjct: 146505 gtcgccaaggt 146495 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 406 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 145415 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 145357 Score = 54.0 bits (27), Expect = 8e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacga 365 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 146421 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacga 146363
>dbj|AK067551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108H01, full insert sequence Length = 868 Score = 77.8 bits (39), Expect = 6e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 163 aggaagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacaccctc 222 |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 79 aggaagccggtgttcgtcaaggtggaccagctcaagcccggcacgggcggccacacgctc 138 Query: 223 atcgtcaaggt 233 ||| |||||| Sbjct: 139 gtcgccaaggt 149 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 307 atcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgac 366 ||||| ||||||||| | ||||||||||| |||| |||| | || |||||||||||||| Sbjct: 223 atcgccgagtgcctcatcggcgacgagaccggctgcatcctgttcaccgcccgcaacgag 282 Query: 367 caagttgacctgttgaaggctg 388 || ||||||||| ||||||||| Sbjct: 283 caggttgacctgatgaaggctg 304 Score = 61.9 bits (31), Expect = 3e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 406 cgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 |||||||| |||||||| |||||||||| || ||||||||||| |||||||| ||||| Sbjct: 322 cgcaatgcaaaaattgatatgttcaaaggatcaatgaggcttgctgtggacaaatgggg 380
>ref|NM_001063076.1| Oryza sativa (japonica cultivar-group) Os06g0103400 (Os06g0103400) mRNA, partial cds Length = 902 Score = 63.9 bits (32), Expect = 9e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 308 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgacc 367 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| | | Sbjct: 315 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaaccaac 374 Query: 368 aagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgt 427 |||||||| || ||||| | || | || | |||||| |||||||| || |||||||||| Sbjct: 375 aagttgacttggtgaagccaggcaccacggtcatcttccgcaatgccaagattgacatgt 434 Query: 428 tcaa 431 |||| Sbjct: 435 tcaa 438
>dbj|AK071627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107F06, full insert sequence Length = 1006 Score = 63.9 bits (32), Expect = 9e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 308 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgacc 367 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| | | Sbjct: 350 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaaccaac 409 Query: 368 aagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgt 427 |||||||| || ||||| | || | || | |||||| |||||||| || |||||||||| Sbjct: 410 aagttgacttggtgaagccaggcaccacggtcatcttccgcaatgccaagattgacatgt 469 Query: 428 tcaa 431 |||| Sbjct: 470 tcaa 473
>dbj|AK067021.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090L10, full insert sequence Length = 902 Score = 63.9 bits (32), Expect = 9e-07 Identities = 101/124 (81%) Strand = Plus / Plus Query: 308 tcgcggagtgcctcgtgggcgacgagactggctccatcatctttaccgcccgcaacgacc 367 |||| ||||||||||| |||||| | || ||| || || |||| |||||||||||| | | Sbjct: 315 tcgctgagtgcctcgtcggcgacaacaccggcaccgtcctcttcaccgcccgcaaccaac 374 Query: 368 aagttgacctgttgaaggctggtgctacagccatcttgcgcaatgctaaaattgacatgt 427 |||||||| || ||||| | || | || | |||||| |||||||| || |||||||||| Sbjct: 375 aagttgacttggtgaagccaggcaccacggtcatcttccgcaatgccaagattgacatgt 434 Query: 428 tcaa 431 |||| Sbjct: 435 tcaa 438
>gb|DQ122779.1| Medicago sativa clone C4 unknown mRNA Length = 557 Score = 58.0 bits (29), Expect = 5e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 404 tgcgcaatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggg 463 |||| ||||| |||||||||||||| |||| || ||||||||||| |||||||| |||| Sbjct: 341 tgcgaaatgcaaaaattgacatgtttaaaggatcaatgaggcttgctgtggacaaatggg 400 Query: 464 g 464 | Sbjct: 401 g 401
>gb|DQ244757.1| Zea mays clone 10513 mRNA sequence Length = 723 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 421 gacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 ||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 379 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 422
>gb|BT016179.1| Zea mays clone Contig12 mRNA sequence Length = 965 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 421 gacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 ||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 473 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 516
>gb|AY105519.1| Zea mays PCO124021 mRNA sequence Length = 802 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 421 gacatgttcaaagcttcgatgaggcttgccgtggacaagtgggg 464 ||||||||||| | ||||||| ||||||| |||||||||||||| Sbjct: 439 gacatgttcaagggttcgatgcggcttgcagtggacaagtgggg 482
>emb|CT834030.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN084N13, full insert sequence Length = 718 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 403 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 460
>emb|CT834029.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039G13, full insert sequence Length = 770 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 453 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 510
>emb|CT834028.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA016P19, full insert sequence Length = 756 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 375 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 432
>dbj|AK243663.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100089F08, full insert sequence Length = 3045 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 2730 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 2787
>ref|NM_001060911.1| Oryza sativa (japonica cultivar-group) Os05g0100800 (Os05g0100800) mRNA, partial cds Length = 753 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 374 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 431
>gb|L47612.1|PIAEMB10R Picea glauca EMB10 mRNA Length = 380 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 392 ctacagccatcttgcgcaatgctaaaattgacatgttcaaag 433 |||||| |||||||||||||||||| || |||||||| |||| Sbjct: 19 ctacagtcatcttgcgcaatgctaagatcgacatgtttaaag 60
>dbj|AK121085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064B05, full insert sequence Length = 756 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 377 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 434
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 40197 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 40140
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Minus Query: 409 aatgctaaaattgacatgttcaaagcttcgatgaggcttgccgtggacaagtggggga 466 ||||| || ||||| |||||||| | |||||| ||||||| |||||||||||||||| Sbjct: 49426 aatgccaagattgatatgttcaaggggtcgatgcggcttgcggtggacaagtggggga 49369
>gb|AY104871.1| Zea mays PCO094431 mRNA sequence Length = 902 Score = 48.1 bits (24), Expect = 0.052 Identities = 66/80 (82%) Strand = Plus / Plus Query: 352 accgcccgcaacgaccaagttgacctgttgaaggctggtgctacagccatcttgcgcaat 411 |||||||||||||| || |||||||| |||||| | | | | |||| ||||| |||||| Sbjct: 404 accgcccgcaacgaacaggttgaccttttgaagccagatacaacagtgatcttccgcaat 463 Query: 412 gctaaaattgacatgttcaa 431 || || ||||| |||||||| Sbjct: 464 gccaagattgatatgttcaa 483
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 0.82 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 aggtggaccagctcaagccggg 203 |||||||||||||||||||||| Sbjct: 8339476 aggtggaccagctcaagccggg 8339497
>gb|AC007588.6| Drosophila melanogaster clone BACR30O03, complete sequence Length = 166221 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 137245 ggcaccaacggccacagcctcatcg 137269
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 10141616 ggcaccaacggccacagcctcatcg 10141640
>ref|NM_079017.2| Drosophila melanogaster Heat shock protein cognate 5 CG8542-RA (Hsc70-5), mRNA Length = 2922 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 1532 ggcaccaacggccacagcctcatcg 1508
>gb|AY118844.1| Drosophila melanogaster GM13788 full insert cDNA Length = 2779 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 1368 ggcaccaacggccacagcctcatcg 1344
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 399 catcttgcgcaatgctaaaattgacatgttcaa 431 |||||| |||||||| || |||||||||||||| Sbjct: 219025 catcttccgcaatgccaagattgacatgttcaa 218993
>gb|AC008229.3|AC008229 Drosophila melanogaster, chromosome 2R, region 51E-51F, BAC clone BACR16C17, complete sequence Length = 180425 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 22000 ggcaccaacggccacagcctcatcg 22024
>gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, complete sequence Length = 161500 Score = 42.1 bits (21), Expect = 3.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 630 taagcttgtttatttcttatg 650 ||||||||||||||||||||| Sbjct: 114587 taagcttgtttatttcttatg 114607
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 42.1 bits (21), Expect = 3.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 399 catcttgcgcaatgctaaaattgacatgttcaa 431 |||||| |||||||| || |||||||||||||| Sbjct: 83921 catcttccgcaatgccaagattgacatgttcaa 83889
>dbj|AP006412.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT29C05, TM0301c, complete sequence Length = 48718 Score = 42.1 bits (21), Expect = 3.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 166 aagcctgtgttcgtcaaggtggaccagctcaagccgggcaccaacggccacac 218 |||||||||||| ||| ||||| |||||||| || || |||||||| ||||| Sbjct: 24210 aagcctgtgttcaccaaagtggatcagctcaaaccaggaaccaacggtcacac 24262
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 42.1 bits (21), Expect = 3.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 399 catcttgcgcaatgctaaaattgacatgttcaa 431 |||||| |||||||| || |||||||||||||| Sbjct: 1517 catcttccgcaatgccaagattgacatgttcaa 1549
>gb|L01502.1|DROHSC5A Drosophila melanogaster heat shock protein cognate 71 (Hsc5) mRNA, complete cds Length = 2897 Score = 42.1 bits (21), Expect = 3.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 ggcaccaacggccacaccctcatcg 226 |||||||||||||||| |||||||| Sbjct: 1507 ggcaccaacggccacagcctcatcg 1483 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 114,476,658 Number of extensions: 5996781 Number of successful extensions: 123282 Number of sequences better than 10.0: 46 Number of HSP's gapped: 123274 Number of HSP's successfully gapped: 84 Length of query: 856 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 834 Effective length of database: 18,508,616,841 Effective search space: 15436186445394 Effective search space used: 15436186445394 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
