ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111l10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 753 bits (380), Expect = 0.0 Identities = 380/380 (100%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2172 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 2231 Query: 872 gtgcccagcctgtgagctggccgttgattgcccgtccgccgccgtcggctgttgatgctc 931 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2232 gtgcccagcctgtgagctggccgttgattgcccgtccgccgccgtcggctgttgatgctc 2291 Query: 932 agctgcatgcgtgcgtgcgatgcagcatgatgtgctgtgtgaattttaccggggaaaagt 991 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2292 agctgcatgcgtgcgtgcgatgcagcatgatgtgctgtgtgaattttaccggggaaaagt 2351 Query: 992 atgagagtacgaatgtgccgtacgtgtaaattatcaagggcagaagaaacatgaccgttc 1051 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2352 atgagagtacgaatgtgccgtacgtgtaaattatcaagggcagaagaaacatgaccgttc 2411 Query: 1052 tgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgttttcatc 1111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2412 tgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgttttcatc 2471 Query: 1112 atcgttctgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgt 1171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2472 atcgttctgatttctgatgggagtttcggaccactgctacttgagtaatttctcaaatgt 2531 Query: 1172 tttcatcatcgttaagaacc 1191 |||||||||||||||||||| Sbjct: 2532 tttcatcatcgttaagaacc 2551 Score = 573 bits (289), Expect = e-160 Identities = 289/289 (100%) Strand = Plus / Plus Query: 4 tcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttctccctc 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 tcacatcctcccttcctgctgagctgagcacgcccctctgctgcacgccccttctccctc 755 Query: 64 ccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggc 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ccaaccttgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggc 815 Query: 124 tcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaaga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 tcgacttcgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaaga 875 Query: 184 tcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 tcgtctccctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccg 935 Query: 244 tggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 292 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 tggccacctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 984 Score = 311 bits (157), Expect = 3e-81 Identities = 157/157 (100%) Strand = Plus / Plus Query: 659 ggaattcgatgacaagctccacccaggcggcccgttcgacccgctcggcctcgccaccga 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1985 ggaattcgatgacaagctccacccaggcggcccgttcgacccgctcggcctcgccaccga 2044 Query: 719 ccccgaccaggcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgtt 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2045 ccccgaccaggcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgtt 2104 Query: 779 ctccatgctgggcttcttcatccaggcctacgtcacc 815 ||||||||||||||||||||||||||||||||||||| Sbjct: 2105 ctccatgctgggcttcttcatccaggcctacgtcacc 2141 Score = 240 bits (121), Expect = 1e-59 Identities = 121/121 (100%) Strand = Plus / Plus Query: 428 gtaccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcat 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1550 gtaccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcat 1609 Query: 488 catccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaa 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 catccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaa 1669 Query: 548 g 548 | Sbjct: 1670 g 1670 Score = 170 bits (86), Expect = 7e-39 Identities = 86/86 (100%) Strand = Plus / Plus Query: 291 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1087 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 1146 Query: 351 tacctcaacggcgaggttcccggaga 376 |||||||||||||||||||||||||| Sbjct: 1147 tacctcaacggcgaggttcccggaga 1172 Score = 161 bits (81), Expect = 7e-36 Identities = 87/89 (97%) Strand = Plus / Plus Query: 547 agaccggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatcccta 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1764 agaccggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatcccta 1823 Query: 607 tcaacctgatccccgtcgtcgtcgccgag 635 |||||||||||| || ||||||||||||| Sbjct: 1824 tcaacctgatcctcgccgtcgtcgccgag 1852 Score = 107 bits (54), Expect = 9e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 377 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1382 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 1435 Score = 63.9 bits (32), Expect = 1e-06 Identities = 32/32 (100%) Strand = Plus / Plus Query: 629 cgccgagtactacaggatcaccaacggactgg 660 |||||||||||||||||||||||||||||||| Sbjct: 1870 cgccgagtactacaggatcaccaacggactgg 1901
>ref|NM_001074125.1| Oryza sativa (japonica cultivar-group) Os11g0242800 (Os11g0242800) mRNA, complete cds Length = 1185 Score = 581 bits (293), Expect = e-162 Identities = 496/565 (87%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 78 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 137 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 138 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 197 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 198 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 248 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 310 ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 249 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 308 Query: 311 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 370 |||||| | || ||||| ||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 309 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 368 Query: 371 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 369 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 428 Query: 431 ccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcat 490 |||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 429 ccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcat 488 Query: 491 ccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaagac 550 ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 489 ccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaagac 548 Query: 551 cggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatccctatcaa 610 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 549 cggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaa 608 Query: 611 cctgatccccgtcgtcgtcgccgag 635 ||| ||| || ||||| ||||||| Sbjct: 609 cctcatcgtcgccgtcgccgccgag 633 Score = 230 bits (116), Expect = 9e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||| ||||| | || ||||||||||| Sbjct: 642 cgtcggcggcgccgagtactaccggatcatcaacggcctggatctggaggacaagctcca 701 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 |||||| ||||| ||||||||||| || || || | |||||| ||||||||||||||||| Sbjct: 702 cccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgct 761 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 762 gaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcat 821 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 822 ccaggcctacgtcacc 837 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 927 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 928 acgcccagcctgt 940
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 581 bits (293), Expect = e-162 Identities = 496/565 (87%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 68 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 127 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 128 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 187 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 188 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 238 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 310 ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 239 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 298 Query: 311 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 370 |||||| | || ||||| ||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 299 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 358 Query: 371 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 359 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 418 Query: 431 ccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcat 490 |||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 419 ccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcat 478 Query: 491 ccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaagac 550 ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 479 ccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaagac 538 Query: 551 cggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatccctatcaa 610 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 539 cggcgcccttctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaa 598 Query: 611 cctgatccccgtcgtcgtcgccgag 635 ||| ||| || ||||| ||||||| Sbjct: 599 cctcatcgtcgccgtcgccgccgag 623 Score = 230 bits (116), Expect = 9e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||| ||||| | || ||||||||||| Sbjct: 632 cgtcggcggcgccgagtactaccggatcatcaacggcctggatctggaggacaagctcca 691 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 |||||| ||||| ||||||||||| || || || | |||||| ||||||||||||||||| Sbjct: 692 cccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgct 751 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 752 gaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcat 811 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 812 ccaggcctacgtcacc 827 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 917 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 918 acgcccagcctgt 930
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 581 bits (293), Expect = e-162 Identities = 496/565 (87%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 79 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 138 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 139 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 198 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 199 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 249 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 310 ||||||| ||| ||||| ||| || |||||||||||||||||||||||||||||||||| Sbjct: 250 ctcgagccccgacatcggcgatgagctcgccaagtggtacggccctgacaggaggatctt 309 Query: 311 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 370 |||||| | || ||||| ||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 310 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 369 Query: 371 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 370 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 429 Query: 431 ccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcat 490 |||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 430 ccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcat 489 Query: 491 ccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaagac 550 ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 490 ccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaagac 549 Query: 551 cggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatccctatcaa 610 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 550 cggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaa 609 Query: 611 cctgatccccgtcgtcgtcgccgag 635 ||| ||| || ||||| ||||||| Sbjct: 610 cctcatcgtcgccgtcgccgccgag 634 Score = 230 bits (116), Expect = 9e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||| ||||| | || ||||||||||| Sbjct: 643 cgtcggcggcgccgagtactaccggatcatcaacggcctggatctggaggacaagctcca 702 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 |||||| ||||| ||||||||||| || || || | |||||| ||||||||||||||||| Sbjct: 703 cccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgct 762 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 763 gaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcat 822 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 823 ccaggcctacgtcacc 838 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 928 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 929 acgcccagcctgt 941
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 573 bits (289), Expect = e-160 Identities = 495/565 (87%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 78 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 137 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 138 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 197 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 198 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 248 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacggccctgacaggaggatcta 310 ||||||| ||| ||||| ||| || |||||| ||||||||||||||||||||||||||| Sbjct: 249 ctcgagccccgacatcggcgatgagctcgccgagtggtacggccctgacaggaggatctt 308 Query: 311 cttgcccaacggcctccttgaccggtcggaggtgccggagtacctcaacggcgaggttcc 370 |||||| | || ||||| ||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 309 cttgccggagggtctcctggaccgctcagaggtgccggactacctcaacggagaggtccc 368 Query: 371 cggagactacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 369 cggagactacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 428 Query: 431 ccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcat 490 |||||||| |||||| ||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 429 ccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcatcat 488 Query: 491 ccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaagac 550 ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 489 ccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaagac 548 Query: 551 cggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatccctatcaa 610 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 549 cggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatccccatcaa 608 Query: 611 cctgatccccgtcgtcgtcgccgag 635 ||| ||| || ||||| ||||||| Sbjct: 609 cctcatcgtcgccgtcgccgccgag 633 Score = 230 bits (116), Expect = 9e-57 Identities = 176/196 (89%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||| ||||| | || ||||||||||| Sbjct: 642 cgtcggcggcgccgagtactaccggatcatcaacggcctggatctggaggacaagctcca 701 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 |||||| ||||| ||||||||||| || || || | |||||| ||||||||||||||||| Sbjct: 702 cccaggtggcccattcgacccgctggggctggcgagcgacccggaccaggcggcgctgct 761 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 762 gaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctggggttcttcat 821 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 822 ccaggcctacgtcacc 837 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 927 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 928 acgcccagcctgt 940
>gb|DQ244303.1| Zea mays clone 4593 mRNA sequence Length = 1130 Score = 377 bits (190), Expect = e-101 Identities = 307/346 (88%) Strand = Plus / Plus Query: 269 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 328 |||||| ||||||||||||||||| |||||||||||||||||| |||| | || ||| | Sbjct: 225 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctctt 284 Query: 329 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 388 ||||| |||||||| ||||||||||||| ||| ||||| || ||||||||||||||||| Sbjct: 285 ggaccgctcggaggtaccggagtacctcaccggagaggtccctggagactacggctacga 344 Query: 389 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 448 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 345 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 404 Query: 449 ccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaa 508 ||||||||| |||||||||||||| ||||| || ||||||| |||||| |||||| Sbjct: 405 ccatgccagatgggccatgctcggtgccgctggcgctgtcatcccagaggcgtgcaacaa 464 Query: 509 gtttggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttga 568 ||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 465 gttcggcgctaactgcggccccgaggccgtctggttcaagaccggcgccctgcttctgga 524 Query: 569 cggcaacaccctcaactacttcggcaacagcatccctatcaacctg 614 |||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 525 cggcaacaccctcagctatttcggcaacagcatccccatcaacctg 570 Score = 157 bits (79), Expect = 1e-34 Identities = 160/187 (85%) Strand = Plus / Plus Query: 629 cgccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccaggcgg 688 ||||||||||||| |||||| |||||||||||| |||| |||||||| ||||| || || Sbjct: 609 cgccgagtactaccggatcatcaacggactggacctcgaggacaagctgcaccccggtgg 668 Query: 689 cccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgctcaaggtgaa 748 ||| |||||||| || ||| | |||| ||| |||||||||| || | ||||||||||| Sbjct: 669 ccccttcgaccccctgggcttggccagcgattccgaccaggccgccatcctcaaggtgaa 728 Query: 749 ggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatccaggccta 808 ||||||||||||||| ||||| |||||||| |||||| | | ||| |||||||||||||| Sbjct: 729 ggagatcaagaacggccggctcgccatgttttccatgtttgcctttttcatccaggccta 788 Query: 809 cgtcacc 815 ||||||| Sbjct: 789 cgtcacc 795 Score = 119 bits (60), Expect = 2e-23 Identities = 72/76 (94%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 826 cacctcagcgacccctttggcaacaacctgctcaccgtcatttccggcgccgccgagagg 885 Query: 872 gtgcccagcctgtgag 887 |||||||||||||| Sbjct: 886 acgcccagcctgtgag 901 Score = 75.8 bits (38), Expect = 3e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 84 atggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctcc 143 |||||||| || ||||| ||||||| || |||||| |||| ||||||||||||||||| Sbjct: 49 atggcggctctagctccatccaagattctgggcaccaagctcaacttcgccggctcctcc 108 Query: 144 aggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttc 197 | || ||||| || ||||| || || || || ||||||||||||||||||||| Sbjct: 109 cgctacgccaccgcagcgcccaccgcgggggctcagaagatcgtctccctcttc 162
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 369 bits (186), Expect = 2e-98 Identities = 306/346 (88%) Strand = Plus / Plus Query: 269 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 328 |||||| |||||||||||||| || |||||||||||||||||| |||| | || || | Sbjct: 352 cgacgagctcgccaagtggtatggtcctgacaggaggatctacctgccggatgggctgtt 411 Query: 329 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 388 |||||||||||||||||||||||||||| ||| ||||| || |||||||| |||||||| Sbjct: 412 ggaccggtcggaggtgccggagtacctcaccggagaggtccctggagactatggctacga 471 Query: 389 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 448 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 472 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 531 Query: 449 ccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaa 508 ||||||||| |||||||||||||| ||||| || ||||||| |||||| |||||| Sbjct: 532 ccatgccagatgggccatgctcggtgccgctggcgctgtcatcccagaggcgtgcaacaa 591 Query: 509 gtttggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttga 568 ||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 592 gttcggcgctaactgcggccccgaggccgtctggttcaagaccggagccctgctcctgga 651 Query: 569 cggcaacaccctcaactacttcggcaacagcatccctatcaacctg 614 |||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 652 cggcaacaccctcagctatttcggcaacagcatccccatcaacctg 697 Score = 198 bits (100), Expect = 3e-47 Identities = 172/196 (87%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||||||||| |||| |||||||| || Sbjct: 727 cgtcggcggcgccgagtactaccggatcatcaacggactggacctcgaggacaagctgca 786 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 ||| || ||||| |||||||| || ||||| |||| ||||||||||||||| || | || Sbjct: 787 ccccggtggccccttcgaccccctgggcctggccagcgaccccgaccaggccgccatcct 846 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 |||||||||||||||||||||||| ||||| ||||||||||||||| | | ||||||||| Sbjct: 847 caaggtgaaggagatcaagaacggccggctcgccatgttctccatgttcgccttcttcat 906 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 907 ccaggcctacgtcacc 922 Score = 135 bits (68), Expect = 4e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 1012 Query: 872 gtgcccagcctgtgag 887 |||||||||||||| Sbjct: 1013 acgcccagcctgtgag 1028 Score = 79.8 bits (40), Expect = 2e-11 Identities = 94/112 (83%) Strand = Plus / Plus Query: 82 caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 141 ||||||||||||||||||| ||||||| || ||||||| |||| ||||||| ||||||| Sbjct: 174 caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgcgggctcct 233 Query: 142 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 193 || | || ||||| || ||||| || || || || |||||||| |||||||| Sbjct: 234 cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 285
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 361 bits (182), Expect = 4e-96 Identities = 305/346 (88%) Strand = Plus / Plus Query: 269 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 328 |||||| ||||||||||||||||| |||||||||||||||||| |||| | || ||| | Sbjct: 210 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctctt 269 Query: 329 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 388 ||||| |||||||| ||||||||||||| ||| ||||| || |||||||| |||||||| Sbjct: 270 ggaccgctcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 329 Query: 389 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 448 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 330 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 389 Query: 449 ccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaa 508 ||||||||| |||||||||||||| ||||| || ||||||| |||||| |||||| Sbjct: 390 ccatgccagatgggccatgctcggtgccgctggcgctgtcatcccagaggcgtgcaacaa 449 Query: 509 gtttggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttga 568 ||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 450 gttcggcgctaactgcggccccgaggccgtctggttcaagaccggagccctgctcctcga 509 Query: 569 cggcaacaccctcaactacttcggcaacagcatccctatcaacctg 614 ||| |||||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 510 cggaaacaccctcagctatttcggcaacagcatccccatcaacctg 555 Score = 190 bits (96), Expect = 8e-45 Identities = 171/196 (87%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| |||||| |||||||||||| |||| |||||||| || Sbjct: 585 cgtcggcggcgccgagtactaccggatcatcaacggactggacctcgaggacaagctgca 644 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 ||| || ||||| |||||||| || ||| | |||| ||||||||||||||| || | || Sbjct: 645 ccccggtggccccttcgaccccctgggcttggccagcgaccccgaccaggccgccatcct 704 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 |||||||||||||||||||||||| ||||| ||||||||||||||| | | ||||||||| Sbjct: 705 caaggtgaaggagatcaagaacggccggctcgccatgttctccatgttcgccttcttcat 764 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 765 ccaggcctacgtcacc 780 Score = 135 bits (68), Expect = 4e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 870 Query: 872 gtgcccagcctgtgag 887 |||||||||||||| Sbjct: 871 acgcccagcctgtgag 886 Score = 75.8 bits (38), Expect = 3e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 84 atggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcctcc 143 |||||||| || ||||| ||||||| || |||||| |||| ||||||||||||||||| Sbjct: 34 atggcggctcttgctccatccaagattctgggcaccaagctcaacttcgccggctcctcc 93 Query: 144 aggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccctcttc 197 | || ||||| || ||||| || || || || ||||||||||||||||||||| Sbjct: 94 cgctacgccaccgcagcgcccaccgcgggggctcagaagatcgtctccctcttc 147
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 353 bits (178), Expect = 9e-94 Identities = 304/346 (87%) Strand = Plus / Plus Query: 269 cgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcct 328 |||||| ||||||||||||||||| |||||||||||||||||| |||| | || || | Sbjct: 208 cgacgagctcgccaagtggtacggtcctgacaggaggatctacctgccggatgggctgtt 267 Query: 329 tgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacga 388 |||||||||||||| ||||||||||||| ||| ||||| || |||||||| |||||||| Sbjct: 268 ggaccggtcggaggtaccggagtacctcaccggagaggtccctggagactatggctacga 327 Query: 389 tccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcat 448 |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 328 cccttttggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgat 387 Query: 449 ccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaa 508 ||||||||| |||||||||||||| ||||| || ||||||| ||||| |||||| Sbjct: 388 ccatgccagatgggccatgctcggtgccgctggcgctgtcatcccagaggcctgcaacaa 447 Query: 509 gtttggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttga 568 ||| ||||| ||||| ||||| ||||| || ||||||||||||||||| |||||||| || Sbjct: 448 gttcggcgctaactgtggccctgaggctgtctggttcaagaccggcgcgctgctcctgga 507 Query: 569 cggcaacaccctcaactacttcggcaacagcatccctatcaacctg 614 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 508 cggcaacaccctcaactacttcggcaacagcatccccatcaacctg 553 Score = 190 bits (96), Expect = 8e-45 Identities = 171/196 (87%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactggaattcgatgacaagctcca 679 ||||| || ||||||||||||| ||||||||||||||||||| | || |||||||| || Sbjct: 583 cgtcggcggcgccgagtactaccggatcaccaacggactggaccttgaggacaagctgca 642 Query: 680 cccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgct 739 ||| || ||||| |||||||| || ||||| |||| ||||||||||||||| || | || Sbjct: 643 ccccggtggccccttcgaccccctgggcctggccagcgaccccgaccaggccgccatcct 702 Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcat 799 |||||||||||||||||||||||| ||||| || |||||||||||| | | ||||||||| Sbjct: 703 caaggtgaaggagatcaagaacggccggctcgcgatgttctccatgttcgccttcttcat 762 Query: 800 ccaggcctacgtcacc 815 |||||||||||||||| Sbjct: 763 ccaggcctacgtcacc 778 Score = 121 bits (61), Expect = 6e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 868 Query: 872 gtgcccagcctgt 884 ||| ||||||| Sbjct: 869 acgcctagcctgt 881 Score = 87.7 bits (44), Expect = 9e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 82 caatggcggcgctcgctccgaccaagatgctcggcacccggctcgacttcgccggctcct 141 ||||||||||||||||||| ||||||| || ||||||| |||| ||||||||||||||| Sbjct: 30 caatggcggcgctcgctccatccaagattctgggcacccagctcaacttcgccggctcct 89 Query: 142 ccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctccct 193 || | || ||||| || ||||| || || || || |||||||| |||||||| Sbjct: 90 cccgctacgccaccgcagcgcccaccgcgggggctcagaagattgtctccct 141
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 204 bits (103), Expect = 5e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 669 gacaagctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccag 728 ||||||||||||||||| ||||| ||||||||||| || || || | |||||| |||||| Sbjct: 40012 gacaagctccacccaggtggcccattcgacccgctggggctggcgagcgacccggaccag 40071 Query: 729 gcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctg 788 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 40072 gcggcgctgctgaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctg 40131 Query: 789 ggcttcttcatccaggcctacgtcacc 815 || |||||||||||||||||||||||| Sbjct: 40132 gggttcttcatccaggcctacgtcacc 40158 Score = 170 bits (86), Expect = 7e-39 Identities = 187/222 (84%), Gaps = 9/222 (4%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 38104 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 38163 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 38164 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 38223 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 38224 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 38274 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 292 ||||||| ||| ||||| ||| || ||||||||||||||||| Sbjct: 38275 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 38316 Score = 161 bits (81), Expect = 7e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 428 gtaccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcat 487 ||||||||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 39208 gtaccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcat 39267 Query: 488 catccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaa 547 |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 39268 catccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaa 39327 Query: 548 g 548 | Sbjct: 39328 g 39328 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40189 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 40248 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 40249 acgcccagcctgt 40261 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 547 agaccggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatcccta 606 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 39434 agaccggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatcccca 39493 Query: 607 tcaacctgatccccgtcgtcgtcgccgag 635 ||||||| ||| || ||||| ||||||| Sbjct: 39494 tcaacctcatcgtcgccgtcgccgccgag 39522 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 291 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 350 ||||||||||||||||||| |||||| | || ||||| ||||| || ||||||||||| Sbjct: 38427 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 38486 Query: 351 tacctcaacggcgaggttcccggaga 376 ||||||||||| ||||| |||||||| Sbjct: 38487 tacctcaacggagaggtccccggaga 38512 Score = 67.9 bits (34), Expect = 8e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 377 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 39057 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 39110 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactgg 660 ||||| || ||||||||||||| |||||| |||||| |||| Sbjct: 39531 cgtcggcggcgccgagtactaccggatcatcaacggcctgg 39571
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 204 bits (103), Expect = 5e-49 Identities = 136/147 (92%) Strand = Plus / Plus Query: 669 gacaagctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccag 728 ||||||||||||||||| ||||| ||||||||||| || || || | |||||| |||||| Sbjct: 7580926 gacaagctccacccaggtggcccattcgacccgctggggctggcgagcgacccggaccag 7580985 Query: 729 gcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctg 788 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 7580986 gcggcgctgctgaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctg 7581045 Query: 789 ggcttcttcatccaggcctacgtcacc 815 || |||||||||||||||||||||||| Sbjct: 7581046 gggttcttcatccaggcctacgtcacc 7581072 Score = 170 bits (86), Expect = 7e-39 Identities = 187/222 (84%), Gaps = 9/222 (4%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 7579018 tgggcctgaggcgatggcggcgctcgccccgtccaagatgctcggcacccggctcaactt 7579077 Query: 131 cgccggctcctccaggtatgccacagcggcgccgactgccggcgcgcagaagatcgtctc 190 ||||||||||||| | || ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 7579078 cgccggctcctcccgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctc 7579137 Query: 191 cctcttcgaccgcttcaacaagaagcctgccccgaagccgaagcccgcgcccgtggccac 250 ||||| ||| ||||||||| ||||||||||| |||||||| |||| || | Sbjct: 7579138 cctct---------tcagcaagaagcccgccccgaagcccaagcccgccgccgtcacctc 7579188 Query: 251 ctcgagcgccggcatcgacgacgaactcgccaagtggtacgg 292 ||||||| ||| ||||| ||| || ||||||||||||||||| Sbjct: 7579189 ctcgagccccgacatcggcgatgagctcgccaagtggtacgg 7579230 Score = 161 bits (81), Expect = 7e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 428 gtaccaggcctttgagctcatccatgccaggtgggccatgctcggcgccgccggattcat 487 ||||||||||| |||||| ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 7580122 gtaccaggcctatgagctgatccatgccaggtgggcgatgctcggcgccgctgggttcat 7580181 Query: 488 catccccgaggcgctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaa 547 |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 7580182 catccccgaggcctgcaacaagtttggcgcaaactgcggccccgaggccgtctggttcaa 7580241 Query: 548 g 548 | Sbjct: 7580242 g 7580242 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7581103 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 7581162 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 7581163 acgcccagcctgt 7581175 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 547 agaccggcgccctgctccttgacggcaacaccctcaactacttcggcaacagcatcccta 606 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 7580348 agaccggcgccctcctcctggacggcaacaccctcaactacttcggcaacagcatcccca 7580407 Query: 607 tcaacctgatccccgtcgtcgtcgccgag 635 ||||||| ||| || ||||| ||||||| Sbjct: 7580408 tcaacctcatcgtcgccgtcgccgccgag 7580436 Score = 83.8 bits (42), Expect = 1e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 291 ggccctgacaggaggatctacttgcccaacggcctccttgaccggtcggaggtgccggag 350 ||||||||||||||||||| |||||| | || ||||| ||||| || ||||||||||| Sbjct: 7579341 ggccctgacaggaggatcttcttgccggagggtctcctggaccgctcagaggtgccggac 7579400 Query: 351 tacctcaacggcgaggttcccggaga 376 ||||||||||| ||||| |||||||| Sbjct: 7579401 tacctcaacggagaggtccccggaga 7579426 Score = 67.9 bits (34), Expect = 8e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 377 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||||||||| |||||||| || |||||||||||||||||||| ||||||| Sbjct: 7579971 ctacggctacgacccttttggcctcagcaagaagccagaggacttctccaagta 7580024 Score = 42.1 bits (21), Expect = 4.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 620 cgtcgtcgtcgccgagtactacaggatcaccaacggactgg 660 ||||| || ||||||||||||| |||||| |||||| |||| Sbjct: 7580445 cgtcggcggcgccgagtactaccggatcatcaacggcctgg 7580485
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 141 bits (71), Expect = 7e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 725 ccaggcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccat 784 |||| |||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 202 ccagacggcgctgctgaagttgaaggagatcaagaacgggcggctggccatgttctccat 261 Query: 785 gctgggcttcttcatccaggcctacgtcacc 815 |||||| |||||||||||||||||||||||| Sbjct: 262 gctggggttcttcatccaggcctacgtcacc 292 Score = 129 bits (65), Expect = 3e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 382 Query: 872 gtgcccagcctgt 884 ||||||||||| Sbjct: 383 acgcccagcctgt 395
>gb|BT014450.1| Lycopersicon esculentum clone 133776F, mRNA sequence Length = 1196 Score = 133 bits (67), Expect = 2e-27 Identities = 169/203 (83%) Strand = Plus / Plus Query: 348 gagtacctcaacggcgaggttcccggagactacggctacgatccttttggtctgggcaag 407 |||||| | ||||| || ||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 344 gagtacttgaacggagaagttcccggagactacggttacgatccttttggtttgagcaag 403 Query: 408 aagccagaggacttcgccaagtaccaggcctttgagctcatccatgccaggtgggccatg 467 |||||||| ||||||||||| || ||||| | |||||| ||||| ||||| ||||| ||| Sbjct: 404 aagccagaagacttcgccaaatatcaggcatatgagctgatccacgccagatgggctatg 463 Query: 468 ctcggcgccgccggattcatcatccccgaggcgctcaacaagtttggcgcgaactgcggc 527 ||||| || || || || || ||||| || || ||||||| ||||| || ||||| || Sbjct: 464 ctcggtgctgctgggtttattatcccagaagccttcaacaaatttggtgccaactgtggt 523 Query: 528 cccgaggccgtttggttcaagac 550 || || || |||||||||||||| Sbjct: 524 cctgaagctgtttggttcaagac 546 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 821 gaccccttcggcaacaacctgctcaccgtcatc 853 |||||||| ||||||||| |||||||||||||| Sbjct: 875 gacccctttggcaacaacttgctcaccgtcatc 907 Score = 46.1 bits (23), Expect = 0.29 Identities = 32/35 (91%) Strand = Plus / Plus Query: 267 gacgacgaactcgccaagtggtacggccctgacag 301 ||||| || ||||||||||||||||| |||||||| Sbjct: 263 gacgatgagctcgccaagtggtacggacctgacag 297
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 121 bits (61), Expect = 6e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 726 caggcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 caggcggctctgctcaaggtgaaggagatcaagaacggcaggctggccatgttctccatg 60 Query: 786 ctgggcttcttcatccaggcctacgtcac 814 | | |||||| ||||||||||||||||| Sbjct: 61 ttcgccttctttatccaggcctacgtcac 89 Score = 113 bits (57), Expect = 2e-21 Identities = 69/73 (94%) Strand = Plus / Plus Query: 812 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagagg 871 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 121 cacctcagcgaccccttcggcaacaacctgctcaccgtcatctctggtgccgccgagagg 180 Query: 872 gtgcccagcctgt 884 | |||||||||| Sbjct: 181 gcacccagcctgt 193 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 992 atgagagtacgaatgtgccgtacgtgtaaattatcaag 1029 |||||||| |||||| |||| |||||||||||||||| Sbjct: 282 atgagagtctgaatgtaccgtgcgtgtaaattatcaag 319
>gb|DQ676845.1| Nicotiana tabacum chloroplast pigment-binding protein CP26 (Lhcb5) mRNA, complete cds; nuclear gene for chloroplast product Length = 858 Score = 103 bits (52), Expect = 1e-18 Identities = 226/284 (79%) Strand = Plus / Plus Query: 267 gacgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctc 326 ||||| || ||||||||||||||||| |||||||| || || | | | ||| |||| ||| Sbjct: 181 gacgaggagctcgccaagtggtacggacctgacagaagaattttcctacccgacggtctc 240 Query: 327 cttgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctac 386 | ||| | ||||| | || |||||||| ||||| || ||||||||||||||||| ||| Sbjct: 241 ttggacagatcggaaatccccgagtacctgaacggagaagttcccggagactacggttac 300 Query: 387 gatccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctc 446 ||||| |||||||| ||||||||||||| ||||| || || || ||||| | |||| | Sbjct: 301 gatccctttggtctcagcaagaagccagaagactttgctaaatatcaggcatatgagttg 360 Query: 447 atccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaac 506 ||||| || || ||||| |||||||| || || ||||| | ||||| || || ||||| Sbjct: 361 atccacgctagatgggctatgctcggtgctgctggatttgttatccctgaagccttcaac 420 Query: 507 aagtttggcgcgaactgcggccccgaggccgtttggttcaagac 550 || ||||| || |||| || || || || |||||||||||||| Sbjct: 421 aaatttggtgctgactgtggtcctgaagcagtttggttcaagac 464
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 101 bits (51), Expect = 6e-18 Identities = 123/147 (83%) Strand = Plus / Plus Query: 669 gacaagctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccag 728 |||||| || |||| |||||| |||||||||||||||| |||||| ||||||||| Sbjct: 336 gacaaggtctaccccggcggcgcgttcgacccgctcgggctcgccgatgaccccgacacc 395 Query: 729 gcggcgctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctg 788 || ||| |||||||||||||||| |||||||||| || || ||||||||||||||| | Sbjct: 396 gccgcggagctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttt 455 Query: 789 ggcttcttcatccaggcctacgtcacc 815 || |||||| |||||||| ||||||| Sbjct: 456 gggttcttcgtccaggccatcgtcacc 482
>emb|CT830272.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA052A21, full insert sequence Length = 1225 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 612 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 671 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 672 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 731 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 732 cttcgtccaggccatcgtcacc 753
>emb|CT830271.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA011A08, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 617 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 676 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 677 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 736 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 737 cttcgtccaggccatcgtcacc 758
>emb|CT830270.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA009P09, full insert sequence Length = 1041 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 618 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 677 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 737 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 738 cttcgtccaggccatcgtcacc 759
>emb|CT830269.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI007G05, full insert sequence Length = 1039 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 617 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 676 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 677 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 736 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 737 cttcgtccaggccatcgtcacc 758
>ref|NM_001069474.1| Oryza sativa (japonica cultivar-group) Os09g0346500 (Os09g0346500) mRNA, complete cds Length = 1234 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 618 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 677 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 737 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 738 cttcgtccaggccatcgtcacc 759
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 10793545 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 10793604 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 10793605 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 10793664 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 10793665 cttcgtccaggccatcgtcacc 10793686 Score = 48.1 bits (24), Expect = 0.074 Identities = 30/32 (93%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggc 772 ||||||||||||||||||||||| || ||||| Sbjct: 7133565 aaggtgaaggagatcaagaacggtcgcctggc 7133596
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 17268 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 17327 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 17328 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 17387 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 17388 cttcgtccaggccatcgtcacc 17409
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 130163 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 130222 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 130223 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 130282 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 130283 cttcgtccaggccatcgtcacc 130304
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 613 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 672 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 673 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 732 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 733 cttcgtccaggccatcgtcacc 754
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 618 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 677 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 737 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 738 cttcgtccaggccatcgtcacc 759
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 620 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 679 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 680 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 739 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 740 cttcgtccaggccatcgtcacc 761
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 618 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 677 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 737 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 738 cttcgtccaggccatcgtcacc 759
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 99.6 bits (50), Expect = 2e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 618 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 677 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | ||||||||||||||||||||||||||| || || ||||||||||||||| | ||||| Sbjct: 678 ggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggctt 737 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 738 cttcgtccaggccatcgtcacc 759
>gb|DQ185899.1| Sorghum bicolor putative chloroplast chlorophyll A-B binding protein type II mRNA, partial cds; nuclear gene for chloroplast product Length = 549 Score = 97.6 bits (49), Expect = 9e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgc 738 |||| |||||| |||||||||||||||| |||||| ||||||||| || ||| || Sbjct: 112 accccggcggcgcgttcgacccgctcgggctcgccgatgaccccgacaccgccgcggagc 171 Query: 739 tcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttca 798 |||||||||||||| |||||||||| || || ||||||||||||||| | || |||||| Sbjct: 172 tcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgtttgggttcttcg 231 Query: 799 tccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 232 tccaggccatcgtcacc 248
>emb|CT833768.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA034A06, full insert sequence Length = 720 Score = 95.6 bits (48), Expect = 4e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 71 tgggcttgaggcaatggcggcgctcgctccgaccaagatgctcggcacccggctcgactt 130 ||||| |||||| |||||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 78 tgggcctgaggcgatggcggcgctcgccccatccaagatgctcggcacccggctcaactt 137 Query: 131 cgccggctcctccaggtatgccacagcggcgccgac 166 ||||| ||||||| | || ||||| ||||| ||||| Sbjct: 138 cgccgtctcctcccgctacgccaccgcggcaccgac 173
>emb|CT830273.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN076N12, full insert sequence Length = 736 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 188 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 247 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 248 cgtccaggccatcgtcacc 266
>ref|NM_001050028.1| Oryza sativa (japonica cultivar-group) Os01g0600900 (Os01g0600900) mRNA, complete cds Length = 1179 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 682 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 741 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 742 cgtccaggccatcgtcacc 760
>gb|AC186756.1| Musa acuminata clone MA4_112I10, complete sequence Length = 102441 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| ||||| ||||||||||||||| | |||||||| Sbjct: 61080 gctcaaggtgaaggagatcaagaacggccggcttgccatgttctccatgttcggcttctt 61139 Query: 797 catccaggcctacgtcacc 815 | | |||||| ||||||| Sbjct: 61140 cgtgcaggccatcgtcacc 61158
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 23604155 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 23604214 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 23604215 cgtccaggccatcgtcacc 23604233 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 30024961 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 30025020 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 30025021 cgtccaggccatcgtcacc 30025039
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 66854 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 66913 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 66914 cgtccaggccatcgtcacc 66932
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 683 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 742 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 743 cgtccaggccatcgtcacc 761
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 682 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 741 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 742 cgtccaggccatcgtcacc 760
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 93.7 bits (47), Expect = 1e-15 Identities = 71/79 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 1112 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 1171 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 1172 cgtccaggccatcgtcacc 1190 Score = 48.1 bits (24), Expect = 0.074 Identities = 36/40 (90%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgcc 713 |||| |||| |||||| | ||||||||||||||||||||| Sbjct: 1049 gctctacccgggcggcgccttcgacccgctcggcctcgcc 1088
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 93.7 bits (47), Expect = 1e-15 Identities = 68/75 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| | Sbjct: 1364 aaggtgaaggagatcaagaacgggcggctggccatgttctccatgttcggcttcttcgtt 1423 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 1424 caggccatcgtcacc 1438
>ref|NM_001057121.1| Oryza sativa (japonica cultivar-group) Os03g0592500 (Os03g0592500) mRNA, complete cds Length = 1105 Score = 91.7 bits (46), Expect = 6e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 610 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 668 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 669 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttcttc 728 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 729 gtccaggccatcgtcacc 746
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 616 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 675 Query: 801 caggcc 806 |||||| Sbjct: 676 caggcc 681
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 91.7 bits (46), Expect = 6e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 79204 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 79146 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 79145 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttcttc 79086 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 79085 gtccaggccatcgtcacc 79068
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 676 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 735 Query: 801 caggcc 806 |||||| Sbjct: 736 caggcc 741
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 621 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 680 Query: 801 caggcc 806 |||||| Sbjct: 681 caggcc 686
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 622 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 681 Query: 801 caggcc 806 |||||| Sbjct: 682 caggcc 687
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 91.7 bits (46), Expect = 6e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 21801641 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 21801699 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 21801700 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttcttc 21801759 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 21801760 gtccaggccatcgtcacc 21801777
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||||||||||||||| |||||||||||| | || |||||| || Sbjct: 539 aaggtgaaggagatcaagaacggacggctggcgatgttctccatgttcggattcttcgtc 598 Query: 801 caggcc 806 |||||| Sbjct: 599 caggcc 604 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 447 atccatgccaggtgggccatgctcggcgc 475 ||||| || |||||||||||||||||||| Sbjct: 209 atccacgcgaggtgggccatgctcggcgc 237
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 91.7 bits (46), Expect = 6e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 611 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 669 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 670 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttcttc 729 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 730 gtccaggccatcgtcacc 747
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 91.7 bits (46), Expect = 6e-15 Identities = 117/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 186 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 244 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 245 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttcttc 304 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 305 gtccaggccatcgtcacc 322
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 650 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 709 Query: 801 caggcc 806 |||||| Sbjct: 710 caggcc 715
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 91.7 bits (46), Expect = 6e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| || Sbjct: 1492 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtc 1551 Query: 801 caggcc 806 |||||| Sbjct: 1552 caggcc 1557
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 91.7 bits (46), Expect = 6e-15 Identities = 118/142 (83%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 599 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgc 658 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggctt 793 | |||||||||||||||||||||||| || || || ||||||||||||||| | ||||| Sbjct: 659 ggagctcaaggtgaaggagatcaagaaaggccgcctcgccatgttctccatgttcggctt 718 Query: 794 cttcatccaggcctacgtcacc 815 |||| |||||||| ||||||| Sbjct: 719 cttcgtccaggccatcgtcacc 740
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 89.7 bits (45), Expect = 2e-14 Identities = 114/137 (83%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgc 738 |||| |||||| | ||||||||||||||||||||| |||||||| | ||| || Sbjct: 1015 accccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgtgcgcggagc 1074 Query: 739 tcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttca 798 ||||||||||| ||||||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 1075 tcaaggtgaagaagatcaagaacggccgcctcgccatgttctccatgttcggcttcttcg 1134 Query: 799 tccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 1135 tccaggccatcgtcacc 1151
>emb|CT829716.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055A12, full insert sequence Length = 1049 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 671 gctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttctt 730 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 731 cgtccaggccatcgtcacc 749
>emb|CT829715.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA004B05, full insert sequence Length = 1310 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 975 gctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttctt 1034 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 1035 cgtccaggccatcgtcacc 1053
>ref|NM_001050625.1| Oryza sativa (japonica cultivar-group) Os01g0720500 (Os01g0720500) mRNA, complete cds Length = 1057 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 707 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 766 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 767 cgtccaggccatcgtcacc 785
>gb|BC111384.1| Homo sapiens cDNA clone IMAGE:5198300, partial cds Length = 1043 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 692 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 751 Query: 797 catccaggcctacgtcacc 815 | | |||||| ||||||| Sbjct: 752 cgtgcaggccatcgtcacc 770
>gb|AC186755.1| Musa balbisiana clone MBP_91N22, complete sequence Length = 154246 Score = 85.7 bits (43), Expect = 3e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| | Sbjct: 21075 aaggtgaaggagatcaagaacgggaggctggccatgttctccatgttcggcttcttcgtg 21134 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 21135 caggccatcgtcacc 21149
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | | |||||| ||||||| Sbjct: 750 cgtgcaggccatcgtcacc 768
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 14050 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 13991 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 13990 cgtccaggccatcgtcacc 13972
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 20951 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 21010 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 21011 cgtccaggccatcgtcacc 21029
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 705 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 764 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 765 cgtccaggccatcgtcacc 783
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 705 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 764 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 765 cgtccaggccatcgtcacc 783
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 707 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 766 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 767 cgtccaggccatcgtcacc 785
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 707 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 766 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 767 cgtccaggccatcgtcacc 785
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 85.7 bits (43), Expect = 3e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 658 gctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggcttctt 717 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 718 cgtccaggccatcgtcacc 736
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 85.7 bits (43), Expect = 3e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||||||||| |||||||||||||||||| | || |||||| | Sbjct: 1025 aaggtgaaggagatcaagaacggacgcctggccatgttctccatgttcgggttcttcgtg 1084 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 1085 caggccatcgtcacc 1099
>emb|CT830375.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI216I02, full insert sequence Length = 1060 Score = 83.8 bits (42), Expect = 1e-12 Identities = 63/70 (90%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | || ||||| Sbjct: 705 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcgggttctt 764 Query: 797 catccaggcc 806 | |||||||| Sbjct: 765 cgtccaggcc 774
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| | Sbjct: 624 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtt 683 Query: 801 caggcc 806 |||||| Sbjct: 684 caggcc 689
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| | Sbjct: 1332 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtt 1391 Query: 801 caggcc 806 |||||| Sbjct: 1392 caggcc 1397
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 83.8 bits (42), Expect = 1e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 744 gtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 732 gtgaaggagatcaagaacggacggttggccatgttctccatgttcggcttcttc 785
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||| || Sbjct: 604 aaggtgaaggagatcaagaacggccgcctggctatgttctccatgttcggcttcttcgtc 663 Query: 801 caggcc 806 |||||| Sbjct: 664 caggcc 669
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 83.8 bits (42), Expect = 1e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 744 gtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 725 gtgaaggagatcaagaacggacggttggccatgttctccatgttcggcttcttc 778
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| | Sbjct: 608 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtt 667 Query: 801 caggcc 806 |||||| Sbjct: 668 caggcc 673
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||| || Sbjct: 620 aaggtgaaggagatcaagaacggccgcctggctatgttctccatgttcggcttcttcgtc 679 Query: 801 caggcc 806 |||||| Sbjct: 680 caggcc 685
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||||||||||| | ||||||||| | Sbjct: 1245 aaggtgaaggagatcaagaacggccgcctggccatgttctccatgttcggcttcttcgtt 1304 Query: 801 caggcc 806 |||||| Sbjct: 1305 caggcc 1310
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||| |||||||||||| | ||||||||| || Sbjct: 1301 aaggtgaaggagatcaagaacggccgcctggctatgttctccatgttcggcttcttcgtc 1360 Query: 801 caggcc 806 |||||| Sbjct: 1361 caggcc 1366
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 83.8 bits (42), Expect = 1e-12 Identities = 116/138 (84%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgac-caggcggcgctg 737 ||||||||||| | ||||||||||||||||||||| |||||| ||| | || || | Sbjct: 592 acccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga-g 650 Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 ||||||||||||||| |||||||||| || || ||||||||||||||| | || |||||| Sbjct: 651 ctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcggattcttc 710 Query: 798 atccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 711 gtccaggccatcgtcacc 728
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 81.8 bits (41), Expect = 5e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 2547 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 2606 Query: 797 c 797 | Sbjct: 2607 c 2607
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 81.8 bits (41), Expect = 5e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 679 acccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggcgctgc 738 |||| |||||| | ||||||||||| ||||||||| |||||| ||| || || || Sbjct: 244 accccggcggcgccttcgacccgctgggcctcgccgacgacccggacaccgccgccgagc 303 Query: 739 tcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttca 798 |||||||||||||| |||||||||| || || ||||||||||||||| | ||||||||| Sbjct: 304 tcaaggtgaaggagctcaagaacggccgccttgccatgttctccatgttcggcttcttcg 363 Query: 799 tccaggcctacgtcacc 815 | |||||| ||||||| Sbjct: 364 tgcaggccatcgtcacc 380
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 81.8 bits (41), Expect = 5e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 571 aaggtgaaggagataaagaacgggcggctggccatgttctccatgttcggcttcttc 627
>gb|DQ246091.1| Zea mays clone 15735 mRNA sequence Length = 1072 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| ||||||||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 693 gctcaaggtcaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttctt 752 Query: 797 catccaggcctacgtcacc 815 | | |||||| ||||||| Sbjct: 753 cgtgcaggccatcgtcacc 771
>gb|DQ244490.1| Zea mays clone 8303 mRNA sequence Length = 1099 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || ||||||||||||||| | || ||||| Sbjct: 688 gctcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcgggttctt 747 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 748 cgtccaggccatcgtcacc 766
>emb|CT829292.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI028E10, full insert sequence Length = 1121 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 674 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 733 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 734 cgtccaggccatcgtcacc 752 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 630 ttcgacccgctcggcctcgccgacgaccccg 660
>emb|CT829291.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA034O05, full insert sequence Length = 1121 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 674 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 733 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 734 cgtccaggccatcgtcacc 752 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 630 ttcgacccgctcggcctcgccgacgaccccg 660
>emb|CT833162.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA029N12, full insert sequence Length = 985 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 675 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 734 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 735 cgtccaggccatcgtcacc 753
>emb|CT833161.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011E08, full insert sequence Length = 955 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 645 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 704 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 705 cgtccaggccatcgtcacc 723 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 601 ttcgacccgctcggcctcgccgacgaccccg 631
>ref|NM_001066526.1| Oryza sativa (japonica cultivar-group) Os07g0562700 (Os07g0562700) mRNA, complete cds Length = 1111 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 22434698 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 22434757 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 22434758 cgtccaggccatcgtcacc 22434776 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 22434654 ttcgacccgctcggcctcgccgacgaccccg 22434684 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 747 aaggagatcaagaacggacggctggccatg 776 ||||||||||||||||| ||||| |||||| Sbjct: 23305180 aaggagatcaagaacgggcggctcgccatg 23305209
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 95765 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 95824 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 95825 cgtccaggccatcgtcacc 95843 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 95721 ttcgacccgctcggcctcgccgacgaccccg 95751
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 661 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 720 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 721 cgtccaggccatcgtcacc 739 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 617 ttcgacccgctcggcctcgccgacgaccccg 647
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 685 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 744 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 745 cgtccaggccatcgtcacc 763 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 641 ttcgacccgctcggcctcgccgacgaccccg 671
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 685 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 744 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 745 cgtccaggccatcgtcacc 763 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 641 ttcgacccgctcggcctcgccgacgaccccg 671
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||||| | | |||| ||| Sbjct: 212 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccaggttcggctgctt 271 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 272 cgtccaggccatcgtcacc 290
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 692 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 751 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 752 cgtccaggccatcgtcacc 770 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 648 ttcgacccgctcggcctcgccgacgaccccg 678
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 690 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 749 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 750 cgtccaggccatcgtcacc 768 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 646 ttcgacccgctcggcctcgccgacgaccccg 676
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || ||||||||||||||| | |||||||| Sbjct: 654 gctcaaggtgaaggagctcaagaacggccgccttgccatgttctccatgttcggcttctt 713 Query: 797 catccaggcctacgtcacc 815 | | |||||| ||||||| Sbjct: 714 cgtgcaggccatcgtcacc 732
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 77.8 bits (39), Expect = 8e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| |||||||||| || || |||||||| |||||| | |||||||| Sbjct: 1506 gctcaaggtgaaggagctcaagaacggccgcctcgccatgttttccatgttcggcttctt 1565 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 1566 cgtccaggccatcgtcacc 1584
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 77.8 bits (39), Expect = 8e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| |||||||||||||||||||| |||||||||||||||||| | || |||||| | Sbjct: 805 aaggtcaaggagatcaagaacggacgcctggccatgttctccatgttcggattcttcgtg 864 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 865 caggccatcgtcacc 879
>gb|AC186746.1| Musa acuminata clone MA4_25J11, complete sequence Length = 105019 Score = 75.8 bits (38), Expect = 3e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| |||||||||||||||||||| | || |||||| | Sbjct: 35796 aaggtgaaggagatcaagaacgggaggctggccatgttctccatgtttgggttcttcgtg 35737 Query: 801 caggcc 806 |||||| Sbjct: 35736 caggcc 35731
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || |||||||||||| |||| | |||||||| Sbjct: 390 gctcaaggtgaaggagatcaagaacggtcgtctggccatgttcagcatgttcggcttctt 449 Query: 797 catccaggcc 806 | | |||||| Sbjct: 450 cgtgcaggcc 459
>emb|X61287.1|LECAB9 L.esculentum Cab9 gene for type I (26 kD) CP29 polypeptide Length = 2327 Score = 75.8 bits (38), Expect = 3e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 377 ctacggctacgatccttttggtctgggcaagaagccagaggacttcgccaagta 430 |||||| ||||||||||||||| || ||||||||||||| |||||||||||||| Sbjct: 1018 ctacggttacgatccttttggtttgagcaagaagccagaagacttcgccaagta 1071 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 821 gaccccttcggcaacaacctgctcaccgtcatc 853 |||||||| ||||||||| |||||||||||||| Sbjct: 1907 gacccctttggcaacaacttgctcaccgtcatc 1939 Score = 42.1 bits (21), Expect = 4.6 Identities = 87/109 (79%) Strand = Plus / Plus Query: 440 tgagctcatccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggc 499 |||||| ||||| ||||| ||||| |||||||| || || || || || ||||| || || Sbjct: 1192 tgagctgatccacgccagatgggctatgctcggtgctgctgggtttattatcccagaagc 1251 Query: 500 gctcaacaagtttggcgcgaactgcggccccgaggccgtttggttcaag 548 ||||||| ||||| || ||||| || || || || |||||||||||| Sbjct: 1252 cttcaacaaatttggtgccaactgtggtcctgaagctgtttggttcaag 1300
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 73.8 bits (37), Expect = 1e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || ||||||||||||| |||||| | ||||||||| || Sbjct: 302 aaggtgaaggagatcaagaatggcaggctggccatgttatccatgttcggcttcttcgtc 361 Query: 801 caggc 805 ||||| Sbjct: 362 caggc 366
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 73.8 bits (37), Expect = 1e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2899 aaggtgaaggagattaagaacggtcggctggccatgttctccatg 2943
>gb|M37489.1|PINCABII2 Pinus sylvestris chlorophyll a/b-binding protein (Cab) mRNA, partial cds Length = 583 Score = 73.8 bits (37), Expect = 1e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 285 aaggtgaaggagattaagaacggtcggctggccatgttctccatg 329
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||| | |||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 704 aaggtgaaggagctaaagaacgggcggctggccatgttctccatgttcggcttcttc 760
>gb|AF139465.2|AF139465 Vigna radiata LHCII type III chlorophyll a/b binding protein (CipLhcb3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1047 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||| ||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 697 gctcaaagtgaaggagatcaagaatggaaggctggccatgttctccatg 745
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||||| |||||||| |||||||| |||||||||||| | ||||||||| Sbjct: 420 aaggtgaaggagattaagaacgggcggctggcgatgttctccatgttcggcttcttc 476
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 739 tcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttca 798 |||||||||||||| |||||||||| || || ||||||||||||||| | || |||||| Sbjct: 638 tcaaggtgaaggagctcaagaacggccgcctcgccatgttctccatgttcgggttcttcg 697 Query: 799 tccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 698 tccaggccatcgtcacc 714 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgcc 713 |||| |||| |||||| ||||||||||||||||||||||| Sbjct: 573 gctctaccccggcggcacgttcgacccgctcggcctcgcc 612
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 739 tcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttca 798 |||||||||||||| |||| ||||| || || ||||||||||||||| |||| |||||| Sbjct: 667 tcaaggtgaaggagttcaataacggccgcctcgccatgttctccatgttgggtttcttcg 726 Query: 799 tccaggcctacgtcacc 815 |||||||| ||||||| Sbjct: 727 tccaggccatcgtcacc 743
>gb|DQ436475.1| Pachysandra terminalis chloroplast chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 913 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||| |||||||| |||||||| ||| | |||||||| Sbjct: 625 aaggtgaaggagatcaagaacggccggctggcgatgttctcaatgttcggcttctt 680
>ref|NM_117102.3| Arabidopsis thaliana LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5); chlorophyll binding (LHCB5) mRNA, complete cds Length = 1208 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 737 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 792 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 476 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 535 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 536 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 595 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 596 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 655 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 656 aacacattgaactactttggcaagaacatccctatcaacct 696 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 359 ctcgccaagtggtatggtcctgacaggag 387
>gb|AF339718.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At4g10340) mRNA, complete cds Length = 893 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 553 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 608 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 292 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 351 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 352 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 411 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 412 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 471 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 472 aacacattgaactactttggcaagaacatccctatcaacct 512 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203
>gb|AF326900.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At4g10340) mRNA, complete cds Length = 998 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 605 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 660 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 344 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 403 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 404 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 463 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 464 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 523 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 524 aacacattgaactactttggcaagaacatccctatcaacct 564 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255
>gb|AY070466.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1950 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 100 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 45 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Minus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 361 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 302 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 301 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 242 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 241 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 182 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 181 aacacattgaactactttggcaagaacatccctatcaacct 141 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 478 ctcgccaagtggtatggtcctgacaggag 450
>gb|AF424597.1|AF424597 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 1027 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 605 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 660 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 344 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 403 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 404 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 463 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 464 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 523 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 524 aacacattgaactactttggcaagaacatccctatcaacct 564 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255
>gb|AY054126.1| Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 843 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 553 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 608 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 292 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 351 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 352 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 411 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 412 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 471 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 472 aacacattgaactactttggcaagaacatccctatcaacct 512 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 175 ctcgccaagtggtatggtcctgacaggag 203
>gb|AF380631.1|AF380631 Arabidopsis thaliana AT4g10340/F24G24_140 mRNA, complete cds Length = 982 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 605 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 660 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 344 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 403 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 404 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 463 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 464 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 523 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 524 aacacattgaactactttggcaagaacatccctatcaacct 564 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 227 ctcgccaagtggtatggtcctgacaggag 255
>gb|AF134129.1| Arabidopsis thaliana Lhcb5 protein (Lhcb5) mRNA, complete cds Length = 1029 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 600 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 655 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 339 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 398 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 399 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 458 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 459 ggcgctaactgtggcccagaagctgtctggtttaagactggtgctttgcttcttgatgga 518 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 519 aacacattgaactactttggcaagaacatccctatcaacct 559 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 222 ctcgccaagtggtatggtcctgacaggag 250
>emb|BX829238.1|CNS0A4DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 586 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 641 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 325 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 384 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 385 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 444 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 445 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 504 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 505 aacacattgaactactttggcaagaacatccctatcaacct 545 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 208 ctcgccaagtggtatggtcctgacaggag 236
>emb|BX826540.1|CNS0A4GD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 989 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 585 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 640 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 324 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 383 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 384 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 443 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 444 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 503 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 504 aacacattgaactactttggcaagaacatccctatcaacct 544 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 207 ctcgccaagtggtatggtcctgacaggag 235
>emb|BX826592.1|CNS0A355 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 630 gccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 |||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 592 gccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 647 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 214 ctcgccaagtggtatggtcctgacaggag 242 Score = 42.1 bits (21), Expect = 4.6 Identities = 171/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 331 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 390 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 391 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 450 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| || || || || |||| ||||| || Sbjct: 451 ggcgctaactgtggccctgaagctgtctggtttaaaactggtgctttgcttcttgatgga 510 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 511 aacacattgaactactttggcaagaacatccctatcaacct 551
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 71.9 bits (36), Expect = 5e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || ||||||||||| ||| | |||||||| Sbjct: 636 gctcaaggtgaaggagatcaagaacggtcgccttgccatgttctcaatgtttggcttctt 695 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 cgaggccgtttggttcaagaccggc 554 ||||||||||||||||||| ||||| Sbjct: 390 cgaggccgtttggttcaaggccggc 414
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| ||||||| || || || ||||||||||||||| | || ||||| Sbjct: 1636 gctcaaggtgaaggagctcaagaagggccgcctcgccatgttctccatgttcggattctt 1695 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 1696 cgtccaggccatcgtcacc 1714
>gb|AY087939.1| Arabidopsis thaliana clone 39765 mRNA, complete sequence Length = 1036 Score = 69.9 bits (35), Expect = 2e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 631 ccgagtactacaggatcaccaacggactggaattcgatgacaagctccacccagg 685 ||||||||||||| |||||||||||| |||| ||||| |||||||| |||||||| Sbjct: 648 ccgagtactacagaatcaccaacggattggatttcgaggacaagctacacccagg 702 Score = 50.1 bits (25), Expect = 0.019 Identities = 172/221 (77%) Strand = Plus / Plus Query: 393 tttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctcatccat 452 |||||||| || |||||||| ||| |||| || || ||||| || ||||| | |||||| Sbjct: 386 tttggtcttggaaagaagcctgagaactttgctaaataccaagcttttgaattgatccat 445 Query: 453 gccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaacaagttt 512 || || ||||| ||| | || || || || |||||||| || || || | ||||| | | Sbjct: 446 gcgagatgggctatgttaggagcagctggtttcatcattcctgaagctttaaacaaatat 505 Query: 513 ggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttgacggc 572 ||||| ||||| ||||| || || || ||||| ||||| || || |||| ||||| || Sbjct: 506 ggcgctaactgtggccctgaagctgtctggtttaagactggtgctttgcttcttgatgga 565 Query: 573 aacaccctcaactacttcggcaacagcatccctatcaacct 613 ||||| | |||||||| ||||| | ||||||||||||||| Sbjct: 566 aacacattgaactactttggcaagaacatccctatcaacct 606 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 276 ctcgccaagtggtacggccctgacaggag 304 |||||||||||||| || ||||||||||| Sbjct: 269 ctcgccaagtggtatggtcctgacaggag 297
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 718 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 777 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 778 caggccatcgtcacc 792
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 69.9 bits (35), Expect = 2e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| ||||||||||||||||| || ||||||||| ||||| ||||||||||| | || Sbjct: 740 aaggtcaaggagatcaagaacggccgcctggccatggtctccgtgctgggcttcgccgtc 799 Query: 801 caggcctacgt 811 ||| ||||||| Sbjct: 800 cagtcctacgt 810 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 820 cgaccccttcggcaacaacctgctcaccgtc 850 ||||||||||||| |||||||||| |||||| Sbjct: 853 cgaccccttcggctacaacctgctgaccgtc 883
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 686 gctcaaggtcaaggagatcaagaatggccgcctcgccatgttctccatgttcggcttctt 745 Query: 797 catccag 803 | ||||| Sbjct: 746 cgtccag 752 Score = 46.1 bits (23), Expect = 0.29 Identities = 29/31 (93%) Strand = Plus / Plus Query: 693 ttcgacccgctcggcctcgccaccgaccccg 723 ||||||||||||||||||||| |||||||| Sbjct: 642 ttcgacccgctcggcctcgccgacgaccccg 672
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 1796 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 1855 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 1856 caggccatcgtcacc 1870
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| ||||||| || || || ||||||||||||||| | || ||||| Sbjct: 1636 gctcaaggtgaaggagctcaagaagggccgcctcgccatgttctccatgttcggattctt 1695 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 1696 cgtccaggccatcgtcacc 1714
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 69.9 bits (35), Expect = 2e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||||||| ||||||| ||| |||| || |||||||||||| | || ||||| Sbjct: 675 gctcaaggtgaaggagctcaagaatggaaggctagctatgttctccatgttcggattctt 734 Query: 797 catccaggcctacgtcacc 815 | |||||||| ||||||| Sbjct: 735 cgtccaggccatcgtcacc 753
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 69.9 bits (35), Expect = 2e-08 Identities = 61/67 (91%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggct-ggccatgttctccatgctgggcttcttcat 799 ||||||||||||||||||||||| || || |||||||||||||||| | ||||||||| | Sbjct: 628 aaggtgaaggagatcaagaacgg-cgccttggccatgttctccatgttcggcttcttcgt 686 Query: 800 ccaggcc 806 ||||||| Sbjct: 687 ccaggcc 693
>gb|U51634.1|PPU51634 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 252 Score = 69.9 bits (35), Expect = 2e-08 Identities = 41/43 (95%) Strand = Plus / Plus Query: 743 ggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1 ggtgaaggagattaagaacggtcggctggccatgttctccatg 43
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 119 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 178 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 179 caggccatcgtcacc 193
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 69.9 bits (35), Expect = 2e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| |||||| |||||||||| || |||||||||||||||||| | || |||||| || Sbjct: 701 aaggttaaggagctcaagaacggccgcctggccatgttctccatgttcggtttcttcgtc 760 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 761 caggccatcgtcacc 775
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||| |||||||||| | ||||||||| || Sbjct: 631 aaggtgaaggagatcaagaacggccgcctggcatcgttctccatgttcggcttcttcgtc 690 Query: 801 caggcc 806 |||||| Sbjct: 691 caggcc 696
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 694 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 753 Query: 801 caggcc 806 |||||| Sbjct: 754 caggcc 759
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcc 806 |||||| Sbjct: 708 caggcc 713
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcc 806 |||||| Sbjct: 708 caggcc 713
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 67.9 bits (34), Expect = 8e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctcc 782 ||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 629 gctcaaggtgaaggagatcaagaacggccgccttgccatgttctcc 674
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| | |||||||| ||| ||||||||||||||||| | || |||||| || Sbjct: 668 aaggtgaaggagctaaagaacgggcggttggccatgttctccatgttcgggttcttcgtc 727 Query: 801 caggcc 806 |||||| Sbjct: 728 caggcc 733
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| ||| |||||||||| |||||| | || |||||| | Sbjct: 703 aaggtgaaggagatcaagaacgggcggttggccatgttttccatgttcggattcttcgtg 762 Query: 801 caggcc 806 |||||| Sbjct: 763 caggcc 768
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 67.9 bits (34), Expect = 8e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||||||||||||||||||| || || || |||||||||||| | || ||||| Sbjct: 1572 gctcaaggtgaaggagatcaagaacgggcgtctcgctatgttctccatgtttgggttctt 1631 Query: 797 catccaggcc 806 | | |||||| Sbjct: 1632 cgtgcaggcc 1641
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| | |||||||| ||| ||||||||||||||||| | || |||||| || Sbjct: 226 aaggtgaaggagctaaagaacgggcggttggccatgttctccatgttcgggttcttcgtc 285 Query: 801 caggcc 806 |||||| Sbjct: 286 caggcc 291
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||||||||||| ||| | || |||||| || Sbjct: 676 aaggtgaaggagatcaagaacggccgattggccatgttctcaatgttcgggttcttcgtc 735 Query: 801 caggcc 806 |||||| Sbjct: 736 caggcc 741
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 67.9 bits (34), Expect = 8e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || ||||| |||||||||| | ||||||||| || Sbjct: 1652 aaggtgaaggagatcaagaacggccgcctggcatcgttctccatgttcggcttcttcgtc 1711 Query: 801 caggcc 806 |||||| Sbjct: 1712 caggcc 1717
>gb|DQ244549.1| Zea mays clone 9076 mRNA sequence Length = 983 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 685 aaggtgaaggagatcaagaacggaaggttggctatgttctccatg 729
>gb|DQ185891.1| Sorghum bicolor putative chloroplast chlorophyll A-B binding protein type I mRNA, partial cds; nuclear gene for chloroplast product Length = 294 Score = 65.9 bits (33), Expect = 3e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 743 ggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatcca 802 |||||||||| |||||||||| || || ||||||||||||||| | || |||||| |||| Sbjct: 18 ggtgaaggagctcaagaacggccgccttgccatgttctccatgttcggattcttcgtcca 77 Query: 803 ggcctacgtcacc 815 |||| ||||||| Sbjct: 78 ggccatcgtcacc 90
>emb|AM286231.1| Platanus x acerifolia partial mRNA for chlorophyll a/b-binding protein, photosystem II (ca/bBPII gene) Length = 706 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 549 aaggtgaaggagatcaagaacgggagactggccatgttctccatg 593
>gb|AY267624.1| Bigelowiella natans chlorophyll a/b-binding protein II 2 mRNA, complete cds; nuclear gene for plastid product Length = 1147 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| ||||||||||||||||| || || || |||||||||||||| ||||||| ||| Sbjct: 872 aaggtcaaggagatcaagaacggccgtcttgctatgttctccatgctcggcttctacatt 931 Query: 801 caggc 805 ||||| Sbjct: 932 caggc 936
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 ||||||||||||||||||||||| || |||||||||||||| Sbjct: 623 aaggtgaaggagatcaagaacggccgcctggccatgttctc 663
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 65.9 bits (33), Expect = 3e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| ||||||||||||||||| || ||||| |||||||||||| | || |||||| || Sbjct: 1171 aaggttaaggagatcaagaacggccgcctggcaatgttctccatgtttgggttcttcgtc 1230 Query: 801 caggc 805 ||||| Sbjct: 1231 caggc 1235
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 65.9 bits (33), Expect = 3e-07 Identities = 64/75 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcgcttggccatgttttccatgttcggattcttcgtm 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 65.9 bits (33), Expect = 3e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||| |||||||||| |||| ||||||||||||||| | || ||||| Sbjct: 516 gctcaaggttaaggagctcaagaacggcaggcttgccatgttctccatgttcggattctt 575 Query: 797 catccaggc 805 | ||||||| Sbjct: 576 cgtccaggc 584
>emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b binding protein Length = 978 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 680 aaggtgaaagagattaagaacggtcggctggccatgttctccatg 724
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||| | |||||||| |||||||| |||||||||||| | ||||||||| Sbjct: 537 aaggtgaaggagctaaagaacgggcggctggcgatgttctccatgttcggcttcttc 593
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 65.9 bits (33), Expect = 3e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctc 781 ||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 645 gctcaaggtgaaggagatcaagaacggccgccttgccatgttctc 689
>gb|AY554168.1| Nicotiana tabacum chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 600 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||||||||||||||||||| | |||| |||||||||||| Sbjct: 426 gctcaaggtgaaggagatcaagaacggaagattggctatgttctccatg 474
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 65.9 bits (33), Expect = 3e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||||||||||||||||||||| || || |||||||| |||||| Sbjct: 666 gctcaaggtgaaggagatcaagaacggccgcctcgccatgttatccatg 714
>emb|X95727.1|BJMCAB1GE B.juncea mRNA for chlorophyll a/b-binding protein Length = 1033 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 633 gagtactacaggatcaccaacggactggaattcgatgacaagctccacccaggcggcccg 692 ||||||||| | ||||||||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 574 gagtactaccgaatcaccaacggcttggacttcgaagacaagcttcacccaggaggccca 633 Query: 693 ttcgaccc 700 |||||||| Sbjct: 634 ttcgaccc 641 Score = 60.0 bits (30), Expect = 2e-05 Identities = 267/346 (77%) Strand = Plus / Plus Query: 268 acgacgaactcgccaagtggtacggccctgacaggaggatctacttgcccaacggcctcc 327 ||||||| |||||||||||||| || ||||||||||| |||| |||||| | || || Sbjct: 185 acgacgagctcgccaagtggtatggtcctgacaggagaatcttcttgccggatggtcttt 244 Query: 328 ttgaccggtcggaggtgccggagtacctcaacggcgaggttcccggagactacggctacg 387 | ||| | || || | || |||||| | ||||| || ||| | |||||||| ||||| | Sbjct: 245 tggacagatcagaaatcccagagtacttgaacggtgaagttgctggagactatggctatg 304 Query: 388 atccttttggtctgggcaagaagccagaggacttcgccaagtaccaggcctttgagctca 447 | || || || || ||||||||||| ||| ||||||| || ||||| |||||||| || | Sbjct: 305 acccattcggacttggcaagaagcctgagaacttcgctaaataccaagcctttgaactga 364 Query: 448 tccatgccaggtgggccatgctcggcgccgccggattcatcatccccgaggcgctcaaca 507 | || || || ||||| ||| | || || || || | ||||||||| || || | |||| Sbjct: 365 ttcacgcgagatgggctatgttgggagcagctggttgcatcatccctgaagccttaaaca 424 Query: 508 agtttggcgcgaactgcggccccgaggccgtttggttcaagaccggcgccctgctccttg 567 | | |||||| ||||| ||||| || ||||| ||||| ||||| || || || || |||| Sbjct: 425 aatatggcgctaactgtggccctgaagccgtctggtttaagactggtgctcttcttcttg 484 Query: 568 acggcaacaccctcaactacttcggcaacagcatccctatcaacct 613 | || ||||| | | |||||| ||||| | |||||| |||||||| Sbjct: 485 atggaaacacattgagctactttggcaagaacatcccaatcaacct 530 Score = 42.1 bits (21), Expect = 4.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 738 ctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||| || |||||||||||||| | |||||||||| |||||| | | |||||| Sbjct: 679 ctcaaggttaaagagatcaagaacgggagattggccatgttttccatgtttgctttcttc 738 Query: 798 atcca 802 ||||| Sbjct: 739 atcca 743
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 622 gctcaaggttaaggagatcaagaatggccgcctcgccatgttctccatgtttggcttctt 681
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 63.9 bits (32), Expect = 1e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatg 776 ||||||||||||||||||||||| |||||||||||| Sbjct: 201 aaggtgaaggagatcaagaacggccggctggccatg 236
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 63.9 bits (32), Expect = 1e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| |||||||||||||| || || || ||||||||||||||| | |||||||| Sbjct: 827 gctcaaggttaaggagatcaagaatggccgcctcgccatgttctccatgtttggcttctt 886
>gb|AY786530.1| Haematococcus pluvialis chloroplast major light-harvesting complex II protein m9 mRNA, partial cds; nuclear gene for chloroplast product Length = 577 Score = 61.9 bits (31), Expect = 5e-06 Identities = 60/67 (89%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgc-tgggcttcttcat 799 ||||| ||||||||||||||||| ||| |||||||||||| ||||| | ||||||||| | Sbjct: 293 aaggtcaaggagatcaagaacgggcggttggccatgttct-catgcttcggcttcttcgt 351 Query: 800 ccaggcc 806 ||||||| Sbjct: 352 ccaggcc 358
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttct 795 |||||||||||||||| | |||||||| || ||||||||| | ||||||||||||||| Sbjct: 1418 gctcaaggtgaaggagctgaagaacggccgcctggccatggtggccatgctgggcttct 1476 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttct 795 |||||||||||||||| | |||||||| || ||||||||| | ||||||||||||||| Sbjct: 4861 gctcaaggtgaaggagctgaagaacggccgcctggccatggtggccatgctgggcttct 4919 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatg 776 |||||||||||| |||||||||| |||||||||||| Sbjct: 181 aaggtgaaggaggtcaagaacggccggctggccatg 216 Score = 56.0 bits (28), Expect = 3e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatg 776 |||||||||||| |||||||||| |||||||||||| Sbjct: 6965 aaggtgaaggaggtcaagaacggccggctggccatg 7000 Score = 48.1 bits (24), Expect = 0.074 Identities = 45/52 (86%) Strand = Plus / Plus Query: 740 caaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggc 791 ||||||||||||| | |||||||| || ||||||||| | ||||||||||| Sbjct: 3708 caaggtgaaggaggtgaagaacggccgcctggccatgctggccatgctgggc 3759
>gb|AF398746.1|AF398746 Carlquistia muirii ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1100 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| ||||||||||||||| | | || |||||| Sbjct: 916 aaggtgaaggagatcaagaatggcaggctagccatgttctccatgttcgcgtttttcatc 975 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 976 caggcgtacgt 986
>gb|AF398740.1|AF398740 Wilkesia gymnoxiphium ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| ||||||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagccatgttctccatgttcgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcgcttggccatgttttccatgttcggattcttcgtt 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcgcttggccatgttttccatgttcggattcttcgtt 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| ||| |||||||||| || ||| | || |||||| || Sbjct: 682 aaggtgaaggagctcaagaacgggcggttggccatgttttctatgttcggattcttcgtc 741 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 742 caggccatcgtcacc 756
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 61.9 bits (31), Expect = 5e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| ||| |||||||||| || ||| | || |||||| || Sbjct: 679 aaggtgaaggagctcaagaacgggcggttggccatgttttctatgttcggattcttcgtc 738 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 739 caggccatcgtcacc 753
>gb|L29644.1|EGRLHCPII Euglena gracilis chlorophyll a/b binding protein (LHCPII) gene exons 1-5, 5' end Length = 3122 Score = 61.9 bits (31), Expect = 5e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttct 795 |||||||||||||||| | |||||||| || ||||||||| | ||||||||||||||| Sbjct: 2870 gctcaaggtgaaggaggtgaagaacggccgtctggccatggtggccatgctgggcttct 2928
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagatcaagaacgggcgcttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcc 806 |||||| Sbjct: 708 caggcc 713
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||||||||||||||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 637 aaggtgaaggagatcaagaacgggcgcttggccatgttttccatgttcggattcttcgtt 696 Query: 801 caggcc 806 |||||| Sbjct: 697 caggcc 702
>dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590a, complete sequence Length = 16141 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 744 gtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 11335 gtgaaggagatcaagaatggaaggttggccatgttctccatg 11294
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 60.0 bits (30), Expect = 2e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 ||||| ||||||||||||||||| || |||||||||||||| |||||||||||| | Sbjct: 637 aaggtcaaggagatcaagaacggccgcctggccatgttctcttgcctgggcttcttcgtg 696 Query: 801 caggcc 806 |||||| Sbjct: 697 caggcc 702
>gb|DQ246008.1| Zea mays clone 94546 mRNA sequence Length = 1044 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||||||||||||||| || |||| |||||||| Sbjct: 691 aaggtgaaggagatcaagaacggaaggttggctatgttctc 731
>emb|CT837549.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032J21, full insert sequence Length = 1030 Score = 58.0 bits (29), Expect = 8e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 674 gctccacccaggcggcccgttcgacccgctcggcctcgccaccgaccccgaccaggcggc 733 |||| |||| |||||| | ||||||||||||||||||||| |||||||| | || Sbjct: 617 gctctaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaagcgttcgc 676 Query: 734 gctgctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctggg 790 | |||||||||||||| |||||||||||| || || ||||||| |||||| |||| Sbjct: 677 ggagctcaaggtgaaggggatcaagaacggccgcctccccatgttttccatgttggg 733
>gb|DQ392956.1| Pachysandra terminalis chloroplast chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1083 Score = 58.0 bits (29), Expect = 8e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 |||||||||||||||||||| || | |||||||||||||||||| Sbjct: 634 aaggtgaaggagatcaagaatgggagactggccatgttctccatg 678
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||||||||||||||| || |||| |||||||| Sbjct: 673 aaggtgaaggagatcaagaacggaaggttggctatgttctc 713
>gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 58.0 bits (29), Expect = 8e-05 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagctcaagaacggrcgcttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene for light-harvesting chlorophyll a/b-binding protein 2, complete cds Length = 3125 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 ||||||||||||||||||||||| || ||||||||||||| Sbjct: 2854 aaggtgaaggagatcaagaacgggcgattggccatgttctc 2894
>emb|AJ538464.1|NTA538464 Nicotiana tabacum cDNA-AFLP-fragment BC2-M14-017 Length = 330 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 203 gctcaaggtaaaggagatcaagaacggcagacttgccatgttctccatg 251
>emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||||||||||||||||||||| || || || ||||| |||||| Sbjct: 120 gctcaaggtgaaggagatcaagaacggtcgtcttgcaatgttttccatg 72
>emb|Z16408.1|PSLHCB51 P.sylvestris Lhcb5*1 mRNA encoding Lhcb5 protein Length = 1193 Score = 58.0 bits (29), Expect = 8e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttc 797 |||||||||||||| || || ||| || ||||||||||||| ||||| ||||||||| Sbjct: 778 aaggtgaaggagattaaaaatggaaggttggccatgttctcaatgctcggcttcttc 834 Score = 46.1 bits (23), Expect = 0.29 Identities = 158/203 (77%) Strand = Plus / Plus Query: 348 gagtacctcaacggcgaggttcccggagactacggctacgatccttttggtctgggcaag 407 ||||||||||| || ||||| || ||||| || || || ||||| ||||| || || | | Sbjct: 361 gagtacctcaatggagaggtccctggagattatggatatgatccgtttggacttggtagg 420 Query: 408 aagccagaggacttcgccaagtaccaggcctttgagctcatccatgccaggtgggccatg 467 || ||||| |||| | ||||||||| || | ||| ||||| ||||| || ||||| ||| Sbjct: 421 aaaccagaaaactttgacaagtaccaagcatatgaactcattcatgcaagatgggcaatg 480 Query: 468 ctcggcgccgccggattcatcatccccgaggcgctcaacaagtttggcgcgaactgcggc 527 || || || || || ||||| ||||| ||||| | ||||| || || || ||||||| Sbjct: 481 ctgggagctgcagggttcattatcccagaggcctttaacaaattcggtgcctactgcggt 540 Query: 528 cccgaggccgtttggttcaagac 550 || || || |||||||||||||| Sbjct: 541 cctgaagctgtttggttcaagac 563
>emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding protein of photosystem II Length = 518 Score = 58.0 bits (29), Expect = 8e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||||||||||||||| || |||| |||||||| Sbjct: 205 aaggtgaaggagatcaagaacggaaggttggctatgttctc 245
>gb|M21397.1|TOBCABA Tobacco chlorophyll a/b-binding protein (Cab-C) gene, complete cds Length = 1240 Score = 58.0 bits (29), Expect = 8e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 1066 gctcaaggtaaaggagatcaagaacggcagacttgccatgttctccatg 1114
>gb|AY617096.1| Picea sitchensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 763 Score = 56.0 bits (28), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| ||| |||||||||| || ||| | || |||||| | Sbjct: 648 aaggtgaaggagctcaagaacgggcggttggccatgttttctatgttcggattcttcgnc 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatg 776 ||||||||| ||||||||||||||||| || ||||||||| Sbjct: 1403 gctcaaggttaaggagatcaagaacggccgcctggccatg 1442
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||||| ||||||||||||| ||||||||||||| ||| | |||||||| Sbjct: 872 aaggtgaaggaactcaagaacggacgattggccatgttctctatgtttggcttctt 927
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||| |||||||||||||||||||| | || || |||||||||||| | |||||||| Sbjct: 177 gctcaaagtgaaggagatcaagaacggcagacttgctatgttctccatgtttggcttctt 236
>gb|AY267623.1| Bigelowiella natans chlorophyll a/b-binding protein II 1 mRNA, complete cds; nuclear gene for plastid product Length = 1284 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgct 787 ||||| ||||||||||||||||| || || || |||||||||||||| Sbjct: 878 aaggttaaggagatcaagaacggccgtctcgctatgttctccatgct 924
>gb|DQ018376.1| Pinus krempfii chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 752 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 645 aaggtgaaggagctcaagaacgggcgcttggccatgttttccatgttcggattcttcgtg 704 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 705 caggccatcgtcacc 719
>gb|AF398747.1|AF398747 Anisocarpus scabridus ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398745.1|AF398745 Osmadenia tenella ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398744.1|AF398744 Madia nutans ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398743.1|AF398743 Deinandra lobbii ASCAB9 (ASCAB9) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398741.1|AF398741 Wilkesia gymnoxiphium ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1083 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 899 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 958 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 959 caggcgtacgt 969
>gb|AF398739.1|AF398739 Dubautia scabra ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1037 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 853 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 912 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 913 caggcgtacgt 923
>gb|AF398738.1|AF398738 Dubautia plantaginea ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1102 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 918 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgttcgcgtttttcatc 977 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 978 caggcgtacgt 988
>gb|AF398737.1|AF398737 Dubautia laxa ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1083 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 899 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 958 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 959 caggcgtacgt 969
>gb|AF398736.1|AF398736 Dubautia latifolia ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1085 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 901 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 960 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 961 caggcgtacgt 971
>gb|AF398735.1|AF398735 Dubautia laevigata ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1101 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 917 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgttcgcgtttttcatc 976 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 977 caggcgtacgt 987
>gb|AF398734.1|AF398734 Argyroxiphium sandwicense ASCAB9-C (ASCAB9-C) gene, exons 4, 5 and 6 and partial cds Length = 1083 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 899 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 958 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 959 caggcgtacgt 969
>gb|AF398733.1|AF398733 Argyroxiphium sandwicense ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgttcgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398732.1|AF398732 Argyroxiphium caliginis ASCAB9-B (ASCAB9-B) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgttcgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398731.1|AF398731 Wilkesia gymnoxiphium ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398730.1|AF398730 Dubautia sherffiana ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398729.1|AF398729 Dubautia raillardioides ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398728.1|AF398728 Dubautia plantaginea ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398726.1|AF398726 Dubautia latifolia ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398725.1|AF398725 Dubautia laevigata ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF398723.1|AF398723 Argyroxiphium caliginis ASCAB9-A (ASCAB9-A) gene, exons 4, 5 and 6 and partial cds Length = 1103 Score = 54.0 bits (27), Expect = 0.001 Identities = 60/71 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||||||||||| || |||| || |||||||||||| | | || |||||| Sbjct: 919 aaggtgaaggagatcaagaatggcaggctagcaatgttctccatgtttgcgtttttcatc 978 Query: 801 caggcctacgt 811 ||||| ||||| Sbjct: 979 caggcgtacgt 989
>gb|AF268321.1|AF268321 Chlorarachnion CCMP621 light-harvesting complex protein LHCG12 mRNA, complete cds Length = 1170 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgct 787 ||||| ||||||||||||||||| || || || |||||||||||||| Sbjct: 876 aaggttaaggagatcaagaacggccgtctcgctatgttctccatgct 922
>gb|AF268320.1|AF268320 Chlorarachnion CCMP621 light-harvesting complex protein LHCG11 mRNA, complete cds Length = 1128 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgct 787 ||||| ||||||||||||||||| || || || |||||||||||||| Sbjct: 833 aaggttaaggagatcaagaacggccgtctcgctatgttctccatgct 879
>gb|AF268319.1|AF268319 Chlorarachnion CCMP621 light-harvesting complex protein LHCG4 mRNA, complete cds Length = 1191 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgct 787 ||||| ||||||||||||||||| || || || |||||||||||||| Sbjct: 873 aaggttaaggagatcaagaacggccgtctcgctatgttctccatgct 919
>gb|AY617091.1| Pinus strobus chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagctcaagaacgggcgcttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617090.1| Pinus monticola chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagctcaagaacgggcgcttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AY617089.1| Pinus lambertiana chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| |||||||||| || |||||||||| |||||| | || |||||| | Sbjct: 648 aaggtgaaggagctcaagaacgggcgcttggccatgttttccatgttcggattcttcgtg 707 Query: 801 caggcctacgtcacc 815 |||||| ||||||| Sbjct: 708 caggccatcgtcacc 722
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacgg 763 ||||||||||||||||||||||||||| Sbjct: 642 gctcaaggtgaaggagatcaagaacgg 668
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding (LHB1B1) mRNA, complete cds Length = 1008 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 693 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 752 Query: 801 caggcc 806 |||||| Sbjct: 753 caggcc 758
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 52.0 bits (26), Expect = 0.005 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggc-tggccatgttctccatg 785 ||||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 687 aaggtgaaggagatcaagaacggcaggcttggccctgttctccatg 732
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 631 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 690 Query: 801 caggcc 806 |||||| Sbjct: 691 caggcc 696
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 693 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 752 Query: 801 caggcc 806 |||||| Sbjct: 753 caggcc 758
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 693 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 752 Query: 801 caggcc 806 |||||| Sbjct: 753 caggcc 758
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 95935 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 95994 Query: 801 caggcc 806 |||||| Sbjct: 95995 caggcc 96000 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Minus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||| ||||||||||| || |||| |||||||| Sbjct: 93373 aaggtgaaggagctcaagaacggaaggttggctatgttctc 93333
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Minus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 78267 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 78208 Query: 801 caggcc 806 |||||| Sbjct: 78207 caggcc 78202 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||| ||||||||||| || |||| |||||||| Sbjct: 80829 aaggtgaaggagctcaagaacggaaggttggctatgttctc 80869
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 693 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 752 Query: 801 caggcc 806 |||||| Sbjct: 753 caggcc 758
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 699 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 758 Query: 801 caggcc 806 |||||| Sbjct: 759 caggcc 764
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 52.0 bits (26), Expect = 0.005 Identities = 59/70 (84%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 ||||||||| ||||| |||||||||| || |||||||||||||| || | || ||||| Sbjct: 676 gctcaaggtcaaggaactcaagaacggtaggttggccatgttctccgtgttcgggttctt 735 Query: 797 catccaggcc 806 | |||||||| Sbjct: 736 cgtccaggcc 745
>emb|BX819881.1|CNS0AA6O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 638 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 351 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 410 Query: 801 caggcc 806 |||||| Sbjct: 411 caggcc 416
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 931 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 990 Query: 801 caggcc 806 |||||| Sbjct: 991 caggcc 996
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttcttcatc 800 |||||||||||| ||||||||||| || |||| |||||||| ||| | || |||||| | Sbjct: 631 aaggtgaaggagctcaagaacggaaggttggctatgttctctatgtttggattcttcgtt 690 Query: 801 caggcc 806 |||||| Sbjct: 691 caggcc 696
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 52.0 bits (26), Expect = 0.005 Identities = 59/70 (84%) Strand = Plus / Plus Query: 737 gctcaaggtgaaggagatcaagaacggacggctggccatgttctccatgctgggcttctt 796 |||||||||||| |||||||||||||| || |||| |||||||| ||| | || ||||| Sbjct: 818 gctcaaggtgaaagagatcaagaacggtaggttggctatgttctcaatgttcgggttctt 877 Query: 797 catccaggcc 806 | | |||||| Sbjct: 878 cgttcaggcc 887
>gb|AC189366.1| Brassica rapa subsp. pekinensis clone KBrB046G20, complete sequence Length = 137227 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||||||||||||||| | |||| |||||||| Sbjct: 82977 aaggtgaaggagatcaagaacggaagattggctatgttctc 83017
>dbj|AK229627.1| Arabidopsis thaliana mRNA for photosystem II type I chlorophyll a/b binding protein, complete cds, clone: RAFL19-61-E05 Length = 1051 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||| ||||||||||| || |||| |||||||| Sbjct: 679 aaggtgaaggagctcaagaacggaaggttggctatgttctc 719
>gb|DQ645428.1| Brassica napus chloroplast chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 804 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||||||||||||||| | |||| |||||||| Sbjct: 634 aaggtgaaggagatcaagaacggaagattggctatgttctc 674
>gb|DQ226725.1| Boechera divaricarpa isolate SLW-A-F06 mRNA sequence Length = 452 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctccatg 785 ||||| |||||| |||||||||| || || ||||||||||||||| Sbjct: 226 aaggtaaaggagctcaagaacggtcgtcttgccatgttctccatg 270
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding (LHCB2.2) mRNA, complete cds Length = 1060 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||| |||||||||| || || ||||||||||| Sbjct: 688 aaggtgaaggagctcaagaacggtcgtcttgccatgttctc 728
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase (AT2G05060) mRNA, complete cds Length = 2130 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Minus Query: 741 aaggtgaaggagatcaagaacggacggctggccatgttctc 781 |||||||||||| |||||||||| || || ||||||||||| Sbjct: 1452 aaggtgaaggagctcaagaacggtcgtcttgccatgttctc 1412 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 182,654,500 Number of extensions: 10055839 Number of successful extensions: 217164 Number of sequences better than 10.0: 483 Number of HSP's gapped: 217155 Number of HSP's successfully gapped: 650 Length of query: 1211 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1188 Effective length of database: 18,503,978,556 Effective search space: 21982726524528 Effective search space used: 21982726524528 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
