ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf106h07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063442:Os01g0526200 | 466 | e-131 | 2 | AK073937:Os04g0592400 | 31 | 2.4 | 3 | Os06g0698900:Os06g0698900 | 30 | 4.0 | 4 | Os03g0324600:Os03g0324600 | 30 | 4.0 | 5 | AK109999: | 30 | 4.0 | 6 | AY043215:Os03g0706500 | 30 | 4.0 | 7 | AK110569:Os07g0682000 | 30 | 4.0 | 8 | AK107083:Os03g0706500 | 30 | 4.0 | 9 | Os04g0480600:Os04g0480600 | 30 | 6.9 | 10 | AK121266:Os02g0139600 | 30 | 6.9 | 11 | AK121129:Os01g0709500 | 29 | 9.0 | 12 | AK065353:Os01g0709500 | 29 | 9.0 |
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>AK063442:Os01g0526200 | Length = 419 Score = 466 bits (1198), Expect = e-131 Identities = 237/313 (75%), Positives = 262/313 (83%), Gaps = 2/313 (0%) Frame = +2 Query: 515 QQYRTLQANQQSILQTLKQHRDDDVSRGQAVKNQKALWDKTLEMRFLLQKAFSTSNKLPR 694 ++YRTLQ NQQ+IL+TLKQHRDDDVS+GQAVKNQK LWDK LEMRFLLQKAFSTSNKLP+ Sbjct: 108 KEYRTLQTNQQNILETLKQHRDDDVSKGQAVKNQKVLWDKALEMRFLLQKAFSTSNKLPK 167 Query: 695 DPSKSRFCSHDQEIEQAYVDLLDSSKQTLGCMLELQEALLERNQAAKGVNDTLPDS--NG 868 +P +S FC H+QEIEQAY+DLL+SSKQTLG M+ELQEALLERN+A K V DT S NG Sbjct: 168 EPIRSMFCDHNQEIEQAYLDLLNSSKQTLGSMMELQEALLERNRATKDVTDTDNSSELNG 227 Query: 869 EDDEWLQVQKVQTRITPFRNTEIDKWQRKTQVTTGAAALKGKLHAFNQNISDQVAGYMRD 1048 EDDEW +VQK+Q RITPFRN+EIDKWQRKTQVTTGAAALKGKLHAFNQNISDQV YMRD Sbjct: 228 EDDEWSEVQKLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQNISDQVTSYMRD 287 Query: 1049 PSRMINRMYLRKSDVGVFGESAAESATTVEGKDVEGDPELIDDSEFYHQLLKEFLESCDT 1228 PSRMINRM+LRKS +GVFGE E E + EGDPEL+DDSEFY QLLKEFLESCD Sbjct: 288 PSRMINRMHLRKSTLGVFGEEVGEHENNKEENNTEGDPELVDDSEFYQQLLKEFLESCD- 346 Query: 1229 GGASESAFYALRKKQNKKRKLVDRRASKSRKIRYSVHEKIANFXXXXXXXXXXXXSKLFE 1408 GASESAFYAL+K+Q+KKRKLVDRRASKSRKIRY VHEKIANF KLFE Sbjct: 347 AGASESAFYALKKQQHKKRKLVDRRASKSRKIRYHVHEKIANFMAPVPMVIPPMAPKLFE 406 Query: 1409 NLFGMGNLQKSAA 1447 NLFGMGN + + A Sbjct: 407 NLFGMGNQKSTTA 419
>AK073937:Os04g0592400 | Length = 762 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/98 (24%), Positives = 43/98 (43%) Frame = +2 Query: 515 QQYRTLQANQQSILQTLKQHRDDDVSRGQAVKNQKALWDKTLEMRFLLQKAFSTSNKLPR 694 +Q L A QQ +++ ++ + + RG+ + + E LQ+A + +K Sbjct: 104 EQQALLAAVQQELVKAKEELVEKEKERGKVLDELERAKRAADEANAKLQEALAAQSKAAE 163 Query: 695 DPSKSRFCSHDQEIEQAYVDLLDSSKQTLGCMLELQEA 808 + + + S D E EQA + D + L M QEA Sbjct: 164 ESAAEQ--SGDAEAEQASASMEDELRTKLASMQSQQEA 199
>Os06g0698900:Os06g0698900 | Length = 369 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 13/70 (18%) Frame = -2 Query: 890 LATTHHPLHLSQ----------AMYH---SHPLQPGSAPVKPPAAPACNRESVSMSPTDQ 750 LAT+ HP S AM H S P QP P +PP + + ++PT Sbjct: 25 LATSTHPASPSSDPIPPKPPTSAMSHHDGSKPYQPRRGPERPPPPAPADDAAAHVAPTVD 84 Query: 749 HMLALSPDRD 720 H+ A++ + + Sbjct: 85 HLAAVAAEAE 94
>Os03g0324600:Os03g0324600 | Length = 1073 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +2 Query: 827 AAKGVNDTLPDSNGEDDEWLQVQKVQTRITPFRNTEI 937 AAK + L D+NGE++EWL + Q RI N I Sbjct: 377 AAKSLGMLLSDTNGEEEEWLNISN-QMRILNEDNNRI 412
>AK109999: | Length = 855 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/49 (40%), Positives = 25/49 (51%) Frame = -2 Query: 905 SAPSVLATTHHPLHLSQAMYHSHPLQPGSAPVKPPAAPACNRESVSMSP 759 SAP+ A+ H++ A P+ P APV P AAPA S S SP Sbjct: 40 SAPNGAAS-----HVAPAPAAPAPVAPAVAPVAPVAAPASTLVSSSQSP 83
>AY043215:Os03g0706500 | Length = 388 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -2 Query: 914 LSLSAPSVLATTHHPLHLSQAMYHSHPLQPGSAPVKP-PAAPACNRESVSMSP 759 L L+ PS HH H + YH HP S P P PAA S +M P Sbjct: 19 LQLTPPSPKPDHHHHHHSTFFYYHHHPPPSPSFPSFPSPAAATIASPSPAMHP 71
>AK110569:Os07g0682000 | Length = 282 Score = 30.4 bits (67), Expect = 4.0 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 1255 IKCRLRCSSCITRLEKLLEKLMIKFRVIN 1169 IK L C C +++K+L KL K ++IN Sbjct: 11 IKANLECEKCCKKIQKVLNKLKDKEKIIN 39
>AK107083:Os03g0706500 | Length = 388 Score = 30.4 bits (67), Expect = 4.0 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -2 Query: 914 LSLSAPSVLATTHHPLHLSQAMYHSHPLQPGSAPVKP-PAAPACNRESVSMSP 759 L L+ PS HH H + YH HP S P P PAA S +M P Sbjct: 19 LQLTPPSPKPDHHHHHHSTFFYYHHHPPPSPSFPSFPSPAAATIASPSPAMHP 71
>Os04g0480600:Os04g0480600 | Length = 1695 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 2/29 (6%) Frame = -1 Query: 852 NVSFTPFAAWFRSSKASCSSSM--QPRVC 772 N+SF P A++R+++ +C S++ PRVC Sbjct: 122 NISFAPDGAYWRAARRACMSALLGAPRVC 150
>AK121266:Os02g0139600 | Length = 353 Score = 29.6 bits (65), Expect = 6.9 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = +1 Query: 1357 HGPGAYDGSSNGFEIVREFVWNGQPAEVSRG-------LILGGVQNV--VQAIFRVMDAN 1509 H P GSS G V + +NGQPA +++ I GG + V V +FR D+N Sbjct: 226 HTPKLIGGSSEGGAAVFKLDYNGQPACLAQSPQLHKQMAICGGFERVFEVGPVFRAEDSN 285
>AK121129:Os01g0709500 | Length = 736 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = -2 Query: 872 PLHLSQAMYHSHPLQPGSAPVKPPAAPACNRESVSMSPTDQHMLALSPDRDCRTLTWMDP 693 P H + S+ +PG PV PP + A + S++P Q P C L DP Sbjct: 56 PRHPHEYHSPSNSPEPGLPPVNPPDSHAFKKPK-SLAPAPQSFPPPPPSSYCMALNCQDP 114
>AK065353:Os01g0709500 | Length = 736 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = -2 Query: 872 PLHLSQAMYHSHPLQPGSAPVKPPAAPACNRESVSMSPTDQHMLALSPDRDCRTLTWMDP 693 P H + S+ +PG PV PP + A + S++P Q P C L DP Sbjct: 56 PRHPHEYHSPSNSPEPGLPPVNPPDSHAFKKPK-SLAPAPQSFPPPPPSSYCMALNCQDP 114 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 44,849,717 Number of extensions: 964985 Number of successful extensions: 3208 Number of sequences better than 10.0: 12 Number of HSP's gapped: 3198 Number of HSP's successfully gapped: 12 Length of query: 575 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 469 Effective length of database: 11,155,509 Effective search space: 5231933721 Effective search space used: 5231933721 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
