| Clone Name | FLbaf106g10 |
|---|---|
| Clone Library Name | barley_pub |
>Q01102:LYAM3_MOUSE P-selectin precursor - Mus musculus (Mouse)| Length = 768 Score = 37.4 bits (85), Expect = 0.41 Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 10/121 (8%) Frame = -1 Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 2713 A N P + NQ C + P KW PC LC+ S + MSCS Q C+ Sbjct: 118 ADNEPNNKKNNQDCVEIYIKSNSAPGKWNDEPCFKRKRALCYTASCQDMSCSNQGECIET 177 Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533 G SY SC + G C Y C V P + C H GE + S+ F Sbjct: 178 IG-----SYTCSC-YPGFYGPECEYVKECG---KVNIPQHVLMNCSHPLGEFSFNSQCTF 228 Query: 2532 S 2530 S Sbjct: 229 S 229
>P98109:LYAM3_SHEEP P-selectin precursor - Ovis aries (Sheep)| Length = 769 Score = 36.6 bits (83), Expect = 0.70 Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 10/164 (6%) Frame = -1 Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PCSYP--LLCHRVSGEGMSCSYQLFCLRV 2713 A N P + NQ C + P KW PC LC+R S + MSCS Q C+ Sbjct: 118 ADNEPNNKKNNQDCVEIYIKSPSAPGKWNDEPCGKRKRALCYRASCQDMSCSKQGECIET 177 Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533 G +Y SC + G C Y C P + + C H G + S+ F Sbjct: 178 IG-----NYTCSC-YPGFYGPECEYVRECG---EFDLPQNVHMNCSHPLGNFSFKSQCSF 228 Query: 2532 SPSASSEGLPCSCQLFPLCG*GGAFAFPYQLFCPRGSGMWYWTP 2401 C G A P +L C SG+W +P Sbjct: 229 H-----------------CAEGYALNGPRELEC-LASGIWTNSP 254
>Q8WUF5:IASPP_HUMAN RelA-associated inhibitor - Homo sapiens (Human)| Length = 828 Score = 36.6 bits (83), Expect = 0.70 Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 13/118 (11%) Frame = -1 Query: 666 SKTSPYQACKDG----YGPSQQTPPSTYRSPAC-HG*PASPCIQSSRRWYAEPASPGWL- 505 S+ SP +A DG +G S+ P SP G P+SP Y +P + G L Sbjct: 81 SRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSP----RTPLYLQPDAYGSLD 136 Query: 504 ------PRACCGAGSGRLELPTGRPLPGTCQPECS*RWSGSESPRS-CGRCGARRGIP 352 PRA GAGS P+ RP PG R G +P GR G+ RG P Sbjct: 137 RATSPRPRAFDGAGSSLGRAPSPRPGPGPL------RQQGPPTPFDFLGRAGSPRGSP 188
>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus| haemolyticus (strain JCSC1435) Length = 3608 Score = 36.2 bits (82), Expect = 0.92 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 1/173 (0%) Frame = -3 Query: 2557 DAIFTSTLLSLCIK*GAAMFMSTLPSLWIRWGVCISISALLSPWIRDVV-LDAMLSS*TR 2381 D+ TST +S ++ ST S+ S+SA S + D LS+ T Sbjct: 3161 DSASTSTSVSDSTSASTSLSASTSTSVSDSTSASTSLSASTSTSVSDSTSASTSLSASTS 3220 Query: 2380 ALVFNGRFASTLLSL*MMDVVFDAMFTSTLLSADT*PVTAIFTSTR*SPCWVWPGLTSLS 2201 V + AST LS V D+ TST LSA T T++ ST G TSLS Sbjct: 3221 TSVSDSTSASTSLSASTSTSVSDSTSTSTSLSAST--STSVSDST--------SGSTSLS 3270 Query: 2200 FASFIADNTNSFSSGSLAPISITSSKYSWPHTYR*SKMLKSLCNATEFELADA 2042 ++ + + ++ +S SL+ + TS S + M SL +T ++D+ Sbjct: 3271 ASTSTSVSDSTSTSTSLSASTSTSVSDS-------TSMSTSLSGSTSTSVSDS 3316 Score = 34.7 bits (78), Expect = 2.7 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 1/144 (0%) Frame = -3 Query: 2545 TSTLLSLCIK*GAAMFMSTLPSLWIRWGVCISISALLSPWIRDVV-LDAMLSS*TRALVF 2369 TST +S ++ ST S+ S+SA S + D + LS T V Sbjct: 3255 TSTSVSDSTSGSTSLSASTSTSVSDSTSTSTSLSASTSTSVSDSTSMSTSLSGSTSTSVS 3314 Query: 2368 NGRFASTLLSL*MMDVVFDAMFTSTLLSADT*PVTAIFTSTR*SPCWVWPGLTSLSFASF 2189 + AST LS V D+ TST LSA T + TST S G TS S + Sbjct: 3315 DSTSASTSLSGSTSTSVSDSTSTSTSLSASTSTSVSDSTSTSTS----LSGSTSTSVSDS 3370 Query: 2188 IADNTNSFSSGSLAPISITSSKYS 2117 + +T+S S S + TS+ S Sbjct: 3371 TSASTSSSESTSTSVSDSTSASVS 3394
>Q14162:SREC_HUMAN Endothelial cells scavenger receptor precursor - Homo sapiens| (Human) Length = 830 Score = 35.8 bits (81), Expect = 1.2 Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 10/88 (11%) Frame = -1 Query: 582 CHG*PASPCIQSSRRWYAEPASPGWLPRAC----------CGAGSGRLELPTGRPLPGTC 433 CHG SPC Q S R P GW C C A SG P G C Sbjct: 196 CHG---SPCEQDSGRCACRP---GWWGPECQQQCECVRGRCSAASGECTCPPGFR-GARC 248 Query: 432 QPECS*RWSGSESPRSCGRCGARRGIPC 349 + C G + SCGRC + PC Sbjct: 249 ELPCPAGSHGVQCAHSCGRC--KHNEPC 274
>P42201:LYAM3_BOVIN P-selectin precursor - Bos taurus (Bovine)| Length = 646 Score = 34.7 bits (78), Expect = 2.7 Identities = 45/164 (27%), Positives = 57/164 (34%), Gaps = 10/164 (6%) Frame = -1 Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 2713 A N P + NQ C + P KW PC LC+R S + MSCS Q C+ Sbjct: 118 ADNEPNNKRNNQDCVEIYIKSLSAPGKWNDEPCWKRKRALCYRASCQDMSCSKQGECIET 177 Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533 G +Y SC + G C Y C P + C H G + S F Sbjct: 178 IG-----NYTCSC-YPGFYGPECEYVRECG---EFDLPQHVHMNCSHPLGNFSFNSHCSF 228 Query: 2532 SPSASSEGLPCSCQLFPLCG*GGAFAFPYQLFCPRGSGMWYWTP 2401 C G A P +L C SG+W +P Sbjct: 229 H-----------------CAEGYALNGPSELEC-LASGIWTNSP 254
>P20398:GV7_XENLA Developmental protein XlGV7 - Xenopus laevis (African clawed frog)| Length = 591 Score = 33.9 bits (76), Expect = 4.6 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 9/155 (5%) Frame = +3 Query: 2271 GQVSADRRVDVNMASNTTSIIHRDRRVEANLPLNT---------RALVHEDNMASNTTSL 2423 GQ + V A+NT IIH ++ + + + T + + ED +N Sbjct: 84 GQAGDAKEVTAGQANNTHGIIHEEQPTKEDQDMGTVLPIPAPRGKTVPKEDENQANP--- 140 Query: 2424 IHGDRRADMEMQTPHLIHREGRVDMNMAAPHLMQRERRVDVNMASPHLIHGDRRVDMNLG 2603 + + DME Q L VD+ P Q V+ N PHL + N Sbjct: 141 ---ELKVDMEHQKVEL------VDLIQECPVENQTVEHVEKN--KPHL--DQEHTEKNQD 187 Query: 2604 SPHFIHSDRRVDMNMASPHLIHGDRRVDMNMASPH 2708 H I D + +P+L H DR + + H Sbjct: 188 GQHGILEFLTQDQQLGNPNLQHLDRYLITEVTVKH 222
>P47845:LEG3_RABIT Galectin-3 - Oryctolagus cuniculus (Rabbit)| Length = 242 Score = 33.9 bits (76), Expect = 4.6 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Frame = -1 Query: 651 YQACKDGYGPSQ---QTPPSTYRSPACHG-*PASPCIQSSRRWYAEPASPGWLPRAC-CG 487 Y G+ P Q PP Y P HG P P + +P+ G P A Sbjct: 41 YPGAYPGHAPGAYPGQAPPGPYPGPGAHGAYPGQPGGPGAYPSPGQPSGAGAYPGASPYS 100 Query: 486 AGSGRLELPTGRPLPGTCQP 427 A +G L +P PLPG P Sbjct: 101 ASAGPLPVPYDLPLPGGVMP 120 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 574,826,408 Number of extensions: 13247547 Number of successful extensions: 35272 Number of sequences better than 10.0: 8 Number of HSP's gapped: 35160 Number of HSP's successfully gapped: 9 Length of query: 1101 Length of database: 100,686,439 Length adjustment: 124 Effective length of query: 977 Effective length of database: 66,673,859 Effective search space: 65140360243 Effective search space used: 65140360243 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)