ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf106g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q01102:LYAM3_MOUSE P-selectin precursor - Mus musculus (Mouse) 37 0.41
2P98109:LYAM3_SHEEP P-selectin precursor - Ovis aries (Sheep) 37 0.70
3Q8WUF5:IASPP_HUMAN RelA-associated inhibitor - Homo sapiens (Human) 37 0.70
4Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - ... 36 0.92
5Q14162:SREC_HUMAN Endothelial cells scavenger receptor precursor... 36 1.2
6P42201:LYAM3_BOVIN P-selectin precursor - Bos taurus (Bovine) 35 2.7
7P20398:GV7_XENLA Developmental protein XlGV7 - Xenopus laevis (A... 34 4.6
8P47845:LEG3_RABIT Galectin-3 - Oryctolagus cuniculus (Rabbit) 34 4.6

>Q01102:LYAM3_MOUSE P-selectin precursor - Mus musculus (Mouse)|
          Length = 768
 Score = 37.4 bits (85), Expect = 0.41
 Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 10/121 (8%)
 Frame = -1

Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 2713
            A N P  +  NQ C   +      P KW   PC      LC+  S + MSCS Q  C+  
Sbjct: 118  ADNEPNNKKNNQDCVEIYIKSNSAPGKWNDEPCFKRKRALCYTASCQDMSCSNQGECIET 177

Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533
             G     SY  SC +    G  C Y   C     V  P    + C H  GE +  S+  F
Sbjct: 178  IG-----SYTCSC-YPGFYGPECEYVKECG---KVNIPQHVLMNCSHPLGEFSFNSQCTF 228

Query: 2532 S 2530
            S
Sbjct: 229  S 229



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>P98109:LYAM3_SHEEP P-selectin precursor - Ovis aries (Sheep)|
          Length = 769

 Score = 36.6 bits (83), Expect = 0.70
 Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 10/164 (6%)
 Frame = -1

Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PCSYP--LLCHRVSGEGMSCSYQLFCLRV 2713
            A N P  +  NQ C   +      P KW   PC      LC+R S + MSCS Q  C+  
Sbjct: 118  ADNEPNNKKNNQDCVEIYIKSPSAPGKWNDEPCGKRKRALCYRASCQDMSCSKQGECIET 177

Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533
             G     +Y  SC +    G  C Y   C        P +  + C H  G  +  S+  F
Sbjct: 178  IG-----NYTCSC-YPGFYGPECEYVRECG---EFDLPQNVHMNCSHPLGNFSFKSQCSF 228

Query: 2532 SPSASSEGLPCSCQLFPLCG*GGAFAFPYQLFCPRGSGMWYWTP 2401
                              C  G A   P +L C   SG+W  +P
Sbjct: 229  H-----------------CAEGYALNGPRELEC-LASGIWTNSP 254



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>Q8WUF5:IASPP_HUMAN RelA-associated inhibitor - Homo sapiens (Human)|
          Length = 828

 Score = 36.6 bits (83), Expect = 0.70
 Identities = 40/118 (33%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
 Frame = -1

Query: 666 SKTSPYQACKDG----YGPSQQTPPSTYRSPAC-HG*PASPCIQSSRRWYAEPASPGWL- 505
           S+ SP +A  DG    +G S+  P     SP    G P+SP        Y +P + G L 
Sbjct: 81  SRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSP----RTPLYLQPDAYGSLD 136

Query: 504 ------PRACCGAGSGRLELPTGRPLPGTCQPECS*RWSGSESPRS-CGRCGARRGIP 352
                 PRA  GAGS     P+ RP PG        R  G  +P    GR G+ RG P
Sbjct: 137 RATSPRPRAFDGAGSSLGRAPSPRPGPGPL------RQQGPPTPFDFLGRAGSPRGSP 188



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>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus|
            haemolyticus (strain JCSC1435)
          Length = 3608

 Score = 36.2 bits (82), Expect = 0.92
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
 Frame = -3

Query: 2557 DAIFTSTLLSLCIK*GAAMFMSTLPSLWIRWGVCISISALLSPWIRDVV-LDAMLSS*TR 2381
            D+  TST +S       ++  ST  S+        S+SA  S  + D       LS+ T 
Sbjct: 3161 DSASTSTSVSDSTSASTSLSASTSTSVSDSTSASTSLSASTSTSVSDSTSASTSLSASTS 3220

Query: 2380 ALVFNGRFASTLLSL*MMDVVFDAMFTSTLLSADT*PVTAIFTSTR*SPCWVWPGLTSLS 2201
              V +   AST LS      V D+  TST LSA T   T++  ST         G TSLS
Sbjct: 3221 TSVSDSTSASTSLSASTSTSVSDSTSTSTSLSAST--STSVSDST--------SGSTSLS 3270

Query: 2200 FASFIADNTNSFSSGSLAPISITSSKYSWPHTYR*SKMLKSLCNATEFELADA 2042
             ++  + + ++ +S SL+  + TS   S       + M  SL  +T   ++D+
Sbjct: 3271 ASTSTSVSDSTSTSTSLSASTSTSVSDS-------TSMSTSLSGSTSTSVSDS 3316



 Score = 34.7 bits (78), Expect = 2.7
 Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 1/144 (0%)
 Frame = -3

Query: 2545 TSTLLSLCIK*GAAMFMSTLPSLWIRWGVCISISALLSPWIRDVV-LDAMLSS*TRALVF 2369
            TST +S       ++  ST  S+        S+SA  S  + D   +   LS  T   V 
Sbjct: 3255 TSTSVSDSTSGSTSLSASTSTSVSDSTSTSTSLSASTSTSVSDSTSMSTSLSGSTSTSVS 3314

Query: 2368 NGRFASTLLSL*MMDVVFDAMFTSTLLSADT*PVTAIFTSTR*SPCWVWPGLTSLSFASF 2189
            +   AST LS      V D+  TST LSA T    +  TST  S      G TS S +  
Sbjct: 3315 DSTSASTSLSGSTSTSVSDSTSTSTSLSASTSTSVSDSTSTSTS----LSGSTSTSVSDS 3370

Query: 2188 IADNTNSFSSGSLAPISITSSKYS 2117
             + +T+S  S S +    TS+  S
Sbjct: 3371 TSASTSSSESTSTSVSDSTSASVS 3394



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>Q14162:SREC_HUMAN Endothelial cells scavenger receptor precursor - Homo sapiens|
           (Human)
          Length = 830

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 29/88 (32%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
 Frame = -1

Query: 582 CHG*PASPCIQSSRRWYAEPASPGWLPRAC----------CGAGSGRLELPTGRPLPGTC 433
           CHG   SPC Q S R    P   GW    C          C A SG    P G      C
Sbjct: 196 CHG---SPCEQDSGRCACRP---GWWGPECQQQCECVRGRCSAASGECTCPPGFR-GARC 248

Query: 432 QPECS*RWSGSESPRSCGRCGARRGIPC 349
           +  C     G +   SCGRC  +   PC
Sbjct: 249 ELPCPAGSHGVQCAHSCGRC--KHNEPC 274



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>P42201:LYAM3_BOVIN P-selectin precursor - Bos taurus (Bovine)|
          Length = 646

 Score = 34.7 bits (78), Expect = 2.7
 Identities = 45/164 (27%), Positives = 57/164 (34%), Gaps = 10/164 (6%)
 Frame = -1

Query: 2862 AKNSPG*RSPNQKCAYHH------PEKWI--PC--SYPLLCHRVSGEGMSCSYQLFCLRV 2713
            A N P  +  NQ C   +      P KW   PC      LC+R S + MSCS Q  C+  
Sbjct: 118  ADNEPNNKRNNQDCVEIYIKSLSAPGKWNDEPCWKRKRALCYRASCQDMSCSKQGECIET 177

Query: 2712 SGVVMPCSYRLSCPHVSDEGMPCSYQLFCRCV*SVATPGSYQLFCPHGSGEETPYSRLLF 2533
             G     +Y  SC +    G  C Y   C        P    + C H  G  +  S   F
Sbjct: 178  IG-----NYTCSC-YPGFYGPECEYVRECG---EFDLPQHVHMNCSHPLGNFSFNSHCSF 228

Query: 2532 SPSASSEGLPCSCQLFPLCG*GGAFAFPYQLFCPRGSGMWYWTP 2401
                              C  G A   P +L C   SG+W  +P
Sbjct: 229  H-----------------CAEGYALNGPSELEC-LASGIWTNSP 254



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>P20398:GV7_XENLA Developmental protein XlGV7 - Xenopus laevis (African clawed frog)|
          Length = 591

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 9/155 (5%)
 Frame = +3

Query: 2271 GQVSADRRVDVNMASNTTSIIHRDRRVEANLPLNT---------RALVHEDNMASNTTSL 2423
            GQ    + V    A+NT  IIH ++  + +  + T         + +  ED   +N    
Sbjct: 84   GQAGDAKEVTAGQANNTHGIIHEEQPTKEDQDMGTVLPIPAPRGKTVPKEDENQANP--- 140

Query: 2424 IHGDRRADMEMQTPHLIHREGRVDMNMAAPHLMQRERRVDVNMASPHLIHGDRRVDMNLG 2603
               + + DME Q   L      VD+    P   Q    V+ N   PHL       + N  
Sbjct: 141  ---ELKVDMEHQKVEL------VDLIQECPVENQTVEHVEKN--KPHL--DQEHTEKNQD 187

Query: 2604 SPHFIHSDRRVDMNMASPHLIHGDRRVDMNMASPH 2708
              H I      D  + +P+L H DR +   +   H
Sbjct: 188  GQHGILEFLTQDQQLGNPNLQHLDRYLITEVTVKH 222



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>P47845:LEG3_RABIT Galectin-3 - Oryctolagus cuniculus (Rabbit)|
          Length = 242

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
 Frame = -1

Query: 651 YQACKDGYGPSQ---QTPPSTYRSPACHG-*PASPCIQSSRRWYAEPASPGWLPRAC-CG 487
           Y     G+ P     Q PP  Y  P  HG  P  P    +     +P+  G  P A    
Sbjct: 41  YPGAYPGHAPGAYPGQAPPGPYPGPGAHGAYPGQPGGPGAYPSPGQPSGAGAYPGASPYS 100

Query: 486 AGSGRLELPTGRPLPGTCQP 427
           A +G L +P   PLPG   P
Sbjct: 101 ASAGPLPVPYDLPLPGGVMP 120


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 574,826,408
Number of extensions: 13247547
Number of successful extensions: 35272
Number of sequences better than 10.0: 8
Number of HSP's gapped: 35160
Number of HSP's successfully gapped: 9
Length of query: 1101
Length of database: 100,686,439
Length adjustment: 124
Effective length of query: 977
Effective length of database: 66,673,859
Effective search space: 65140360243
Effective search space used: 65140360243
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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