ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf106f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full... 628 e-176
2emb|CT835111.1| Oryza sativa (indica cultivar-group) cDNA clone:... 168 3e-38
3dbj|AK243437.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 168 3e-38
4ref|NM_001055954.1| Oryza sativa (japonica cultivar-group) Os03g... 168 3e-38
5gb|AY104352.1| Zea mays PCO064372 mRNA sequence 125 4e-25
6gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 121 7e-24
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 7e-24
8emb|CR855236.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 68 9e-08
9ref|NM_001059825.1| Oryza sativa (japonica cultivar-group) Os04g... 68 9e-08
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 68 9e-08
11emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 68 9e-08
12dbj|AK063625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 9e-08
13gb|BT017540.1| Zea mays clone EL01N0422C08.c mRNA sequence 64 1e-06
14gb|AY370890.1| Hordeum vulgare caleosin 1 (Clo1) gene, complete cds 64 1e-06
15gb|AY370889.1| Hordeum vulgare caleosin 1 (Clo1) mRNA, complete cds 64 1e-06
16gb|AY104745.1| Zea mays PCO069403 mRNA sequence 64 1e-06
17gb|AY370892.1| Hordeum vulgare caleosin 2 (Clo2) gene, complete cds 52 0.005
18gb|AY370891.1| Hordeum vulgare caleosin 2 (Clo2) mRNA, complete cds 52 0.005
19gb|AY043288.1| Hordeum vulgare calcium-binding protein 1 (CaBP1)... 52 0.005
20emb|CT831940.1| Oryza sativa (indica cultivar-group) cDNA clone:... 46 0.32
21gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome 46 0.32
22ref|NM_001063839.1| Oryza sativa (japonica cultivar-group) Os06g... 46 0.32
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.32
24gb|AC090811.5| Homo sapiens chromosome 8, clone RP11-55J5, compl... 46 0.32
25dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.32
26dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.32
27gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, co... 46 0.32
28dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.32
29dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.32
30dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.32
31emb|CT835909.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 1.3
32emb|CT835887.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 1.3
33emb|CT828454.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 1.3
34dbj|AK243313.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 44 1.3
35ref|NM_001069691.1| Oryza sativa (japonica cultivar-group) Os09g... 44 1.3
36gb|AC186960.7| Canis Familiaris chromosome 9, clone XX-197N9, co... 44 1.3
37emb|CR848736.10| Zebrafish DNA sequence from clone DKEY-20J3 in ... 44 1.3
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.3
39emb|CR385067.9| Zebrafish DNA sequence from clone CH211-79A21 in... 44 1.3
40gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protei... 44 1.3
41dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.3
42dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic D... 44 1.3
43gb|AC158740.3| Echinops telfairi, clone Echinops telfairi -24265... 44 1.3
44emb|CU041234.1| Mouse DNA sequence from clone WI1-1687L19 on chr... 42 5.0
45gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome 42 5.0
46ref|NM_001049681.1| Oryza sativa (japonica cultivar-group) Os01g... 42 5.0
47emb|AL590842.1| Yersinia pestis CO92 complete genome 42 5.0
48gb|AE017042.1| Yersinia pestis biovar Microtus str. 91001, compl... 42 5.0
49gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 42 5.0
50gb|DQ771569.1| Synthetic construct Yersinia pestis clone FLH0135... 42 5.0
51gb|AC148818.15| Medicago truncatula clone mth2-39c7, complete se... 42 5.0
52gb|CP000308.1| Yersinia pestis Antiqua, complete genome 42 5.0
53gb|CP000305.1| Yersinia pestis Nepal516, complete genome 42 5.0
54gb|AE009952.1| Yersinia pestis KIM, complete genome 42 5.0
55gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 42 5.0
56gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 5.0
57gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (C... 42 5.0
58gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 42 5.0
59gb|CP000249.1| Frankia sp. CcI3, complete genome 42 5.0
60gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Canc... 42 5.0
61gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Canc... 42 5.0
62emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 ... 42 5.0
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 5.0
64gb|AF079973.1|AF079973 Yersinia pseudotuberculosis luxR homolog ... 42 5.0
65emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 42 5.0
66dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic D... 42 5.0
67dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16,... 42 5.0
68emb|BX322795.7| Zebrafish DNA sequence from clone CH211-106E12 i... 42 5.0
69dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 5.0
70gb|AF071401.1|AF071401 Yersinia pestis transcriptional activator... 42 5.0
71gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete s... 42 5.0
72emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chrom... 42 5.0
73emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on ch... 42 5.0
74emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chro... 42 5.0 
>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA
           sequence
          Length = 1157
 Score =  628 bits (317), Expect = e-176
 Identities = 377/397 (94%)
 Strand = Plus / Plus

                                                                       
Query: 88  gcttgttccatctgcagatcctgcagacccggctcgtctcgagtaaccgccgccatgtcg 147
           |||||||| ||||||||||||||||  | ||||||||| ||||||||||||     ||||
Sbjct: 117 gcttgttcgatctgcagatcctgcaagctcggctcgtcgcgagtaaccgccatgtcgtcg 176

                                                                       
Query: 148 tcgtcgaccgatccgtcgctggcgaccgaggcgccccaggcggccgtcaccagagagcgg 207
           |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 177 tcgtcgtccgatccgtcgctggcgaccgaggcgccccaggcggccgtcaccagcgagcgc 236

                                                                       
Query: 208 aagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagcaatggcg 267
           |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 237 aagctcaaccgcgacctgcaggagcagctcgccaagccatatctggccagagcaatggcg 296

                                                                       
Query: 268 gcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatgagcgtg 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatgagcgtg 356

                                                                       
Query: 328 ctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctacccatgggag 387
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 357 ctccagcagcacgccgccttcttcgaccgcaacggcgacggggtcatctacccatgggag 416

                                                                       
Query: 388 accttccaaagcctgcgagcgatcgggcttgggtccccttcagccttcggaacatccata 447
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 417 accttccagagcctgcgagcaatcgggcttgggtcgccttcagccttcggaacatccata 476

                                                
Query: 448 ctcctccacctcgtcctcacttatcctactcaaccgg 484
           |||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctcctccacctcgtcctcacttatcctactcaaccgg 513



 Score =  587 bits (296), Expect = e-164
 Identities = 353/372 (94%)
 Strand = Plus / Plus

                                                                        
Query: 668  tggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagcatggg 727
            |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||
Sbjct: 516  tggatgccttcccctctgctgtcgatccatataaagaacatccacaggggcaagcacggg 575

                                                                        
Query: 728  agcgattctgagacgtatgacactgaagggaggtttgaaccagcaaaattcgatgctata 787
            ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 576  agcgattctgagacgtatgacacagaagggaggtttgaaccagcgaaattcgatgctata 635

                                                                        
Query: 788  ttcagcaagtttggccgaactcggccgaatgctttgtcagaagatgagattaacgccatg 847
            |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 636  ttcagcaagtttggcaaaactcggccaaatgctttgtcagaagatgagattaacgccatg 695

                                                                        
Query: 848  cttaaacacaaccgtaatatgtatgatttcctgggctgggccgcagccaacctcgaatgg 907
            |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 696  cttaaatacaaccgcaatatgtatgatttcctgggctgggccgcggccaacctcgaatgg 755

                                                                        
Query: 908  aagttgctgcacaaggtggcaaaggataaagaaggccttttgcagcgagaaatcgtgagg 967
            ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||
Sbjct: 756  aagttgctgcacaaggtggcaaaggataacgaaggctttttgcagcgagaaatcgtgcgg 815

                                                                        
Query: 968  ggcgccttcgatggcagcctgttcgagcgcctgcaggagagcaagaaatcttcctgaatg 1027
            ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct: 816  ggcgccttcgatggcagcctgttcgagcgtctgcaggaaagcaagaaatctacctgaatg 875

                        
Query: 1028 cggcagtgagcc 1039
             |||||||||||
Sbjct: 876  tggcagtgagcc 887



 Score =  198 bits (100), Expect = 4e-47
 Identities = 198/227 (87%), Gaps = 9/227 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1061 tcgtctatgaaacatctgcacttgaaatttgaaaagcctccctg-----tagtttgagtt 1115
            |||||| | ||| |||||||||||||||||||||||||||||||     |||||||||||
Sbjct: 888  tcgtctctaaaatatctgcacttgaaatttgaaaagcctccctgcattgtagtttgagtt 947

                                                                        
Query: 1116 gtgtgtacgtcgaataagaagtgctcggcccgtctacggcggcctaaacattttcatctg 1175
            ||||  ||||| ||||||||||| | ||||||||| ||||||||||||||||||||| ||
Sbjct: 948  gtgt--acgtcaaataagaagtgtttggcccgtctgcggcggcctaaacattttcatttg 1005

                                                                        
Query: 1176 tcttcatatttggaactggaatttgtactgttattggtagcacatagaaggtgtacag-g 1234
              ||  ||||| ||||||||||||||| | ||||||||||| || ||||||||||||| |
Sbjct: 1006 cattgttattttgaactggaatttgtatttttattggtagcgcacagaaggtgtacagtg 1065

                                                           
Query: 1235 gtacttggtaatgtgcactcttgaatcatcagtacctcgcataatat 1281
            | |||| ||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1066 gaactt-gtaatgtgcactcgtgaatcatcattacctcgcataatat 1111
to top
>emb|CT835111.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA041B02, full
           insert sequence
          Length = 949

 Score =  168 bits (85), Expect = 3e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 202 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 261
           |||||||||||||||||| ||||||||||||||||  ||||||||||||| ||  | || 
Sbjct: 127 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 186

                                                                       
Query: 262 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 321
            | |||||||| ||||||||||||||| |||| | |   ||| | ||| ||   ||||||
Sbjct: 187 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 246

                                                                       
Query: 322 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
           ||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| 
Sbjct: 247 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 306

                                        
Query: 382 tgggagaccttccaaagcctgcgagcgat 410
           ||||||||||||||| | ||| |||||||
Sbjct: 307 tgggagaccttccaagggctgagagcgat 335



 Score =  165 bits (83), Expect = 5e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 664 ggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagca 723
           ||||||||||||||| |||||| ||||  |||||||||||||||| |||| ||| |||||
Sbjct: 408 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 467

                                                                       
Query: 724 tgggagcgattctgagacgtatgacactgaagggaggtttgaaccagcaaaattcgatgc 783
           |||||| || |||||  | ||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct: 468 tgggagtgactctgaagcatatgatactgaagggaggtttgatccatcgaaatttgatgc 527

                                                                       
Query: 784 tatattcagcaagtttggccgaactcggccgaatgctttgtcagaagatgagattaacgc 843
           |||||||||||||| |||| ||||||  || ||||||||| || |||||||| | ||| |
Sbjct: 528 tatattcagcaagtatggcagaactcatccaaatgctttgacaaaagatgagctgaactc 587

                                                      
Query: 844 catgcttaaacacaaccgtaatatgtatgatttcctgggctgg 886
            ||| |||||   ||||| ||||||||||||||| | ||||||
Sbjct: 588 gatgattaaagcaaaccgcaatatgtatgatttcattggctgg 630



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 923  gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 982
            ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||||
Sbjct: 667  gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 726

                                                
Query: 983  agcctgttcgagcgcctgcaggagagcaagaaatct 1018
            |||||||| ||||| || ||||| ||||||||||||
Sbjct: 727  agcctgtttgagcgacttcaggacagcaagaaatct 762



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 443 ccatactcctccacctcgtcctcacttatcctactcaaccgg 484
           |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 368 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 409
to top
>dbj|AK243437.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100068E06,
           full insert sequence
          Length = 1003

 Score =  168 bits (85), Expect = 3e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 202 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 261
           |||||||||||||||||| ||||||||||||||||  ||||||||||||| ||  | || 
Sbjct: 213 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 272

                                                                       
Query: 262 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 321
            | |||||||| ||||||||||||||| |||| | |   ||| | ||| ||   ||||||
Sbjct: 273 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 332

                                                                       
Query: 322 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
           ||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| 
Sbjct: 333 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 392

                                        
Query: 382 tgggagaccttccaaagcctgcgagcgat 410
           ||||||||||||||| | ||| |||||||
Sbjct: 393 tgggagaccttccaagggctgagagcgat 421



 Score =  165 bits (83), Expect = 5e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 664 ggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagca 723
           ||||||||||||||| |||||| ||||  |||||||||||||||| |||| ||| |||||
Sbjct: 494 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 553

                                                                       
Query: 724 tgggagcgattctgagacgtatgacactgaagggaggtttgaaccagcaaaattcgatgc 783
           |||||| || |||||  | ||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct: 554 tgggagtgactctgaagcatatgatactgaagggaggtttgatccatcgaaatttgatgc 613

                                                                       
Query: 784 tatattcagcaagtttggccgaactcggccgaatgctttgtcagaagatgagattaacgc 843
           |||||||||||||| |||| ||||||  || ||||||||| || |||||||| | ||| |
Sbjct: 614 tatattcagcaagtatggcagaactcatccaaatgctttgacaaaagatgagctgaactc 673

                                                      
Query: 844 catgcttaaacacaaccgtaatatgtatgatttcctgggctgg 886
            ||| |||||   ||||| ||||||||||||||| | ||||||
Sbjct: 674 gatgattaaagcaaaccgcaatatgtatgatttcattggctgg 716



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 923  gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 982
            ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||||
Sbjct: 753  gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 812

                                                
Query: 983  agcctgttcgagcgcctgcaggagagcaagaaatct 1018
            |||||||| ||||| || ||||| ||||||||||||
Sbjct: 813  agcctgtttgagcgacttcaggacagcaagaaatct 848



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 443 ccatactcctccacctcgtcctcacttatcctactcaaccgg 484
           |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 454 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 495
to top
>ref|NM_001055954.1| Oryza sativa (japonica cultivar-group) Os03g0222600 (Os03g0222600)
           mRNA, complete cds
          Length = 984

 Score =  168 bits (85), Expect = 3e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 202 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 261
           |||||||||||||||||| ||||||||||||||||  ||||||||||||| ||  | || 
Sbjct: 343 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 402

                                                                       
Query: 262 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 321
            | |||||||| ||||||||||||||| |||| | |   ||| | ||| ||   ||||||
Sbjct: 403 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 462

                                                                       
Query: 322 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
           ||||||||||||||||||||||| |||||||||||||||||||||||  | |||||||| 
Sbjct: 463 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 522

                                        
Query: 382 tgggagaccttccaaagcctgcgagcgat 410
           ||||||||||||||| | ||| |||||||
Sbjct: 523 tgggagaccttccaagggctgagagcgat 551



 Score =  165 bits (83), Expect = 5e-37
 Identities = 188/223 (84%)
 Strand = Plus / Plus

                                                                       
Query: 664 ggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagca 723
           ||||||||||||||| |||||| ||||  |||||||||||||||| |||| ||| |||||
Sbjct: 624 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 683

                                                                       
Query: 724 tgggagcgattctgagacgtatgacactgaagggaggtttgaaccagcaaaattcgatgc 783
           |||||| || |||||  | ||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct: 684 tgggagtgactctgaagcatatgatactgaagggaggtttgatccatcgaaatttgatgc 743

                                                                       
Query: 784 tatattcagcaagtttggccgaactcggccgaatgctttgtcagaagatgagattaacgc 843
           |||||||||||||| |||| ||||||  || ||||||||| || |||||||| | ||| |
Sbjct: 744 tatattcagcaagtatggcagaactcatccaaatgctttgacaaaagatgagctgaactc 803

                                                      
Query: 844 catgcttaaacacaaccgtaatatgtatgatttcctgggctgg 886
            ||| |||||   ||||| ||||||||||||||| | ||||||
Sbjct: 804 gatgattaaagcaaaccgcaatatgtatgatttcattggctgg 846



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 923  gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 982
            ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||||
Sbjct: 883  gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 942

                                                
Query: 983  agcctgttcgagcgcctgcaggagagcaagaaatct 1018
            |||||||| ||||| || ||||| ||||||||||||
Sbjct: 943  agcctgtttgagcgacttcaggacagcaagaaatct 978



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 443 ccatactcctccacctcgtcctcacttatcctactcaaccgg 484
           |||||||| || ||||||||||||  ||||||||||||||||
Sbjct: 584 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 625
to top
>gb|AY104352.1| Zea mays PCO064372 mRNA sequence
          Length = 912

 Score =  125 bits (63), Expect = 4e-25
 Identities = 201/247 (81%)
 Strand = Plus / Plus

                                                                       
Query: 161 cgtcgctggcgaccgaggcgccccaggcggccgtcaccagagagcggaagctcaaccccg 220
           |||| |||| ||| ||||||||||||||  ||||||| || ||||| | |||||||||||
Sbjct: 271 cgtctctggagacggaggcgccccaggctaccgtcacgagggagcgcaggctcaaccccg 330

                                                                       
Query: 221 acctgcaggagcagctcgccaagccatatctggctcgagcaatggcggcggttgacccga 280
           ||||||||||||| ||  ||||||||||||| ||  | || |||| |||||| |||||| 
Sbjct: 331 acctgcaggagcaccttcccaagccatatctcgcgagggctatggtggcggtggacccgg 390

                                                                       
Query: 281 gccacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacg 340
            ||| |||   || | | ||||| | ||| ||   |||||||||||||| ||||||||||
Sbjct: 391 accatccgaccgggaccgaggggcgcgacccccgcggcatgagcgtgcttcagcagcacg 450

                                                                       
Query: 341 ccgccttcttcgaccgcaacggcgacggggtaatctacccatgggagaccttccaaagcc 400
             || ||||||||||||||||||||||| ||  ||||||| |||||||| ||| || || 
Sbjct: 451 tggctttcttcgaccgcaacggcgacggcgtcgtctacccctgggagactttcaaaggca 510

                  
Query: 401 tgcgagc 407
           |||||||
Sbjct: 511 tgcgagc 517



 Score = 93.7 bits (47), Expect = 2e-15
 Identities = 122/147 (82%)
 Strand = Plus / Plus

                                                                       
Query: 740 acgtatgacactgaagggaggtttgaaccagcaaaattcgatgctatattcagcaagttt 799
           |||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||| |
Sbjct: 669 acgtatgacactgaagggaggtttgacccatcaaaattcgacgctatatttagcaagtat 728

                                                                       
Query: 800 ggccgaactcggccgaatgctttgtcagaagatgagattaacgccatgcttaaacacaac 859
           || || ||||  ||  |||| ||| || |||||||||| ||  | ||||||||    |||
Sbjct: 729 ggtcgtactcatccagatgcgttgacaaaagatgagatgaattcgatgcttaaggcaaac 788

                                      
Query: 860 cgtaatatgtatgatttcctgggctgg 886
           || ||||| ||||||||||| ||||||
Sbjct: 789 cgcaatatatatgatttcctcggctgg 815



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 923 gtggcaaaggataaagaaggccttttgcagcgagaaat 960
           ||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 852 gtggcaaaggacaaagatggcctgttgcagcgagaaat 889
to top
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score =  121 bits (61), Expect = 7e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                         
Query: 316   ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 375
             ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||
Sbjct: 67386 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 67445

                                  
Query: 376   tacccatgggagaccttccaa 396
             ||||| |||||||||||||||
Sbjct: 67446 tacccctgggagaccttccaa 67466



 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                         
Query: 661   gcaggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaa 720
             |||||||||||||||||| |||||| ||||  |||||||||||||||| |||| ||| ||
Sbjct: 68244 gcaggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaa 68303

                                                      
Query: 721   gcatgggagcgattctgagacgtatgacactgaagggaggt 761
             ||||||||| || |||||  | ||||| |||||||||||||
Sbjct: 68304 gcatgggagtgactctgaagcatatgatactgaagggaggt 68344



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 923   gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 982
             ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||||
Sbjct: 68706 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 68765

                                                 
Query: 983   agcctgttcgagcgcctgcaggagagcaagaaatct 1018
             |||||||| ||||| || ||||| ||||||||||||
Sbjct: 68766 agcctgtttgagcgacttcaggacagcaagaaatct 68801



 Score = 81.8 bits (41), Expect = 6e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                         
Query: 758   aggtttgaaccagcaaaattcgatgctatattcagcaagtttggccgaactcggccgaat 817
             |||||||| ||| | ||||| ||||||||||||||||||| |||| ||||||  || |||
Sbjct: 68447 aggtttgatccatcgaaatttgatgctatattcagcaagtatggcagaactcatccaaat 68506

                                                                         
Query: 818   gctttgtcagaagatgagattaacgccatgcttaaacacaaccgtaatatgtatgatttc 877
             |||||| || |||||||| | ||| | ||| |||||   ||||| |||||||||||||||
Sbjct: 68507 gctttgacaaaagatgagctgaactcgatgattaaagcaaaccgcaatatgtatgatttc 68566

                      
Query: 878   ctgggctgg 886
              | ||||||
Sbjct: 68567 attggctgg 68575



 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 202   gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 247
             |||||||||||||||||| ||||||||||||||||  |||||||||
Sbjct: 66733 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 66778



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 443   ccatactcctccacctcgtcctcacttatcctactcaaccggtaaa 488
             |||||||| || ||||||||||||  ||||||||||||||||||||
Sbjct: 67810 ccatactcatcaacctcgtcctcagctatcctactcaaccggtaaa 67855
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  121 bits (61), Expect = 7e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                           
Query: 316     ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 375
               ||||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||
Sbjct: 6386473 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 6386532

                                    
Query: 376     tacccatgggagaccttccaa 396
               ||||| |||||||||||||||
Sbjct: 6386533 tacccctgggagaccttccaa 6386553



 Score = 97.6 bits (49), Expect = 1e-16
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                           
Query: 661     gcaggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaa 720
               |||||||||||||||||| |||||| ||||  |||||||||||||||| |||| ||| ||
Sbjct: 6387331 gcaggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaa 6387390

                                                        
Query: 721     gcatgggagcgattctgagacgtatgacactgaagggaggt 761
               ||||||||| || |||||  | ||||| |||||||||||||
Sbjct: 6387391 gcatgggagtgactctgaagcatatgatactgaagggaggt 6387431



 Score = 95.6 bits (48), Expect = 4e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                           
Query: 923     gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 982
               ||||| |||||||||||||| || ||||| |||||||  || || |||||||||||||||
Sbjct: 6387793 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 6387852

                                                   
Query: 983     agcctgttcgagcgcctgcaggagagcaagaaatct 1018
               |||||||| ||||| || ||||| ||||||||||||
Sbjct: 6387853 agcctgtttgagcgacttcaggacagcaagaaatct 6387888



 Score = 81.8 bits (41), Expect = 6e-12
 Identities = 107/129 (82%)
 Strand = Plus / Plus

                                                                           
Query: 758     aggtttgaaccagcaaaattcgatgctatattcagcaagtttggccgaactcggccgaat 817
               |||||||| ||| | ||||| ||||||||||||||||||| |||| ||||||  || |||
Sbjct: 6387534 aggtttgatccatcgaaatttgatgctatattcagcaagtatggcagaactcatccaaat 6387593

                                                                           
Query: 818     gctttgtcagaagatgagattaacgccatgcttaaacacaaccgtaatatgtatgatttc 877
               |||||| || |||||||| | ||| | ||| |||||   ||||| |||||||||||||||
Sbjct: 6387594 gctttgacaaaagatgagctgaactcgatgattaaagcaaaccgcaatatgtatgatttc 6387653

                        
Query: 878     ctgggctgg 886
                | ||||||
Sbjct: 6387654 attggctgg 6387662



 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 202     gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 247
               |||||||||||||||||| ||||||||||||||||  |||||||||
Sbjct: 6385820 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 6385865



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                             
Query: 443     ccatactcctccacctcgtcctcacttatcctactcaaccggtaaa 488
               |||||||| || ||||||||||||  ||||||||||||||||||||
Sbjct: 6386897 ccatactcatcaacctcgtcctcagctatcctactcaaccggtaaa 6386942
to top
>emb|CR855236.1| Oryza sativa genomic DNA, chromosome 4, BAC clone:
             OSIGBa0157K09-H0214G12, complete sequence
          Length = 163903

 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 322   agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
             |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 91373 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 91314

                       
Query: 382   tgggagacct 391
             ||||| ||||
Sbjct: 91313 tgggaaacct 91304
to top
>ref|NM_001059825.1| Oryza sativa (japonica cultivar-group) Os04g0510900 (Os04g0510900)
           mRNA, complete cds
          Length = 1150

 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 322 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
           |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 401 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 460

                     
Query: 382 tgggagacct 391
           ||||| ||||
Sbjct: 461 tgggaaacct 470
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 322      agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
                |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 25529328 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 25529269

                          
Query: 382      tgggagacct 391
                ||||| ||||
Sbjct: 25529268 tgggaaacct 25529259
to top
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 322   agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
             |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 15524 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 15465

                       
Query: 382   tgggagacct 391
             ||||| ||||
Sbjct: 15464 tgggaaacct 15455
to top
>dbj|AK063625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E12, full
           insert sequence
          Length = 1150

 Score = 67.9 bits (34), Expect = 9e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 322 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 381
           |||||||| |||||||||| |||||||||||||||| ||| | ||||  | |||||||||
Sbjct: 401 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 460

                     
Query: 382 tgggagacct 391
           ||||| ||||
Sbjct: 461 tgggaaacct 470
to top
>gb|BT017540.1| Zea mays clone EL01N0422C08.c mRNA sequence
          Length = 1288

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 318 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 377
           |||||||||| | |||||||||| |||||||||||||||| ||| | ||||  | |||||
Sbjct: 501 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 560

                       
Query: 378 cccatgggagac 389
           ||| ||||||||
Sbjct: 561 cccttgggagac 572



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 227 aggagcagctcgccaagccatatctggctcgagc 260
           ||||||| ||| |||||||||||||||| |||||
Sbjct: 404 aggagcacctccccaagccatatctggcgcgagc 437
to top
>gb|AY370890.1| Hordeum vulgare caleosin 1 (Clo1) gene, complete cds
          Length = 2652

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 318 catgagcgtgctccagcagcacgccgccttcttcgaccgc 357
           |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 559 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 598
to top
>gb|AY370889.1| Hordeum vulgare caleosin 1 (Clo1) mRNA, complete cds
          Length = 1069

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 318 catgagcgtgctccagcagcacgccgccttcttcgaccgc 357
           |||||||||||| |||||||||| ||||||||||||||||
Sbjct: 369 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 408
to top
>gb|AY104745.1| Zea mays PCO069403 mRNA sequence
          Length = 1383

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 318 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 377
           |||||||||| | |||||||||| |||||||||||||||| ||| | ||||  | |||||
Sbjct: 500 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 559

                       
Query: 378 cccatgggagac 389
           ||| ||||||||
Sbjct: 560 cccttgggagac 571



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 227 aggagcagctcgccaagccatatctggctcgagc 260
           ||||||| ||| |||||||||||||||| |||||
Sbjct: 403 aggagcacctccccaagccatatctggcgcgagc 436
to top
>gb|AY370892.1| Hordeum vulgare caleosin 2 (Clo2) gene, complete cds
          Length = 2118

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 321 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 380
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 364 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 423

                 
Query: 381 atggga 386
           ||||||
Sbjct: 424 atggga 429



 Score = 42.1 bits (21), Expect = 5.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 704 aacatccacaggggcaagcatgggagcga 732
           ||||||||||||| ||||||||| |||||
Sbjct: 811 aacatccacagggccaagcatggcagcga 839
to top
>gb|AY370891.1| Hordeum vulgare caleosin 2 (Clo2) mRNA, complete cds
          Length = 1132

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 321 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 380
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 204 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 263

                 
Query: 381 atggga 386
           ||||||
Sbjct: 264 atggga 269



 Score = 42.1 bits (21), Expect = 5.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 704 aacatccacaggggcaagcatgggagcga 732
           ||||||||||||| ||||||||| |||||
Sbjct: 406 aacatccacagggccaagcatggcagcga 434
to top
>gb|AY043288.1| Hordeum vulgare calcium-binding protein 1 (CaBP1) mRNA, complete
           cds
          Length = 963

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 321 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 380
           ||||||||| ||||||||||  ||||||||||||    | |||||||| || ||||||||
Sbjct: 242 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 301

                 
Query: 381 atggga 386
           ||||||
Sbjct: 302 atggga 307



 Score = 42.1 bits (21), Expect = 5.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 704 aacatccacaggggcaagcatgggagcga 732
           ||||||||||||| ||||||||| |||||
Sbjct: 441 aacatccacagggccaagcatggcagcga 469
to top
>emb|CT831940.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN135H10, full
           insert sequence
          Length = 1062

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 701 aagaacatccacaggggcaagcatgggagcgattc 735
           |||||||||||||  ||||||||||| ||||||||
Sbjct: 523 aagaacatccacaaaggcaagcatggaagcgattc 557



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 335 agcacgccgccttcttcgaccgcaac 360
           |||||| |||||||||||||||||||
Sbjct: 335 agcacgtcgccttcttcgaccgcaac 360
to top
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome
          Length = 9965640

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 215     accccgacctgcaggagcagctcgcca 241
               |||||| ||||||||||||||||||||
Sbjct: 4932979 accccgccctgcaggagcagctcgcca 4933005
to top
>ref|NM_001063839.1| Oryza sativa (japonica cultivar-group) Os06g0254700 (Os06g0254700)
           mRNA, complete cds
          Length = 1063

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 701 aagaacatccacaggggcaagcatgggagcgattc 735
           |||||||||||||  ||||||||||| ||||||||
Sbjct: 524 aagaacatccacaaaggcaagcatggaagcgattc 558



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 335 agcacgccgccttcttcgaccgcaac 360
           |||||| |||||||||||||||||||
Sbjct: 336 agcacgtcgccttcttcgaccgcaac 361
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 701     aagaacatccacaggggcaagcatgggagcgattc 735
               |||||||||||||  ||||||||||| ||||||||
Sbjct: 8024035 aagaacatccacaaaggcaagcatggaagcgattc 8024001



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 335     agcacgccgccttcttcgaccgcaac 360
               |||||| |||||||||||||||||||
Sbjct: 8025157 agcacgtcgccttcttcgaccgcaac 8025132
to top
>gb|AC090811.5| Homo sapiens chromosome 8, clone RP11-55J5, complete sequence
          Length = 176418

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 484   gtaaattcatattattgttattctcat 510
             ||||||| |||||||||||||||||||
Sbjct: 42577 gtaaattgatattattgttattctcat 42603
to top
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0046H10
          Length = 155544

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 701    aagaacatccacaggggcaagcatgggagcgattc 735
              |||||||||||||  ||||||||||| ||||||||
Sbjct: 131553 aagaacatccacaaaggcaagcatggaagcgattc 131519



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 335    agcacgccgccttcttcgaccgcaac 360
              |||||| |||||||||||||||||||
Sbjct: 132675 agcacgtcgccttcttcgaccgcaac 132650
to top
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 701   aagaacatccacaggggcaagcatgggagcgattc 735
             |||||||||||||  ||||||||||| ||||||||
Sbjct: 47804 aagaacatccacaaaggcaagcatggaagcgattc 47770



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 335   agcacgccgccttcttcgaccgcaac 360
             |||||| |||||||||||||||||||
Sbjct: 48926 agcacgtcgccttcttcgaccgcaac 48901
to top
>gb|AC104339.10| Homo sapiens chromosome 8, clone RP11-777J24, complete sequence
          Length = 194212

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 484    gtaaattcatattattgttattctcat 510
              ||||||| |||||||||||||||||||
Sbjct: 161420 gtaaattgatattattgttattctcat 161446
to top
>dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F08, full
           insert sequence
          Length = 1063

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 701 aagaacatccacaggggcaagcatgggagcgattc 735
           |||||||||||||  ||||||||||| ||||||||
Sbjct: 524 aagaacatccacaaaggcaagcatggaagcgattc 558



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 335 agcacgccgccttcttcgaccgcaac 360
           |||||| |||||||||||||||||||
Sbjct: 336 agcacgtcgccttcttcgaccgcaac 361
to top
>dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057G06, full
           insert sequence
          Length = 1064

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 701 aagaacatccacaggggcaagcatgggagcgattc 735
           |||||||||||||  ||||||||||| ||||||||
Sbjct: 525 aagaacatccacaaaggcaagcatggaagcgattc 559



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 335 agcacgccgccttcttcgaccgcaac 360
           |||||| |||||||||||||||||||
Sbjct: 337 agcacgtcgccttcttcgaccgcaac 362
to top
>dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E03, full
            insert sequence
          Length = 2067

 Score = 46.1 bits (23), Expect = 0.32
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 701  aagaacatccacaggggcaagcatgggagcgattc 735
            |||||||||||||  ||||||||||| ||||||||
Sbjct: 1574 aagaacatccacaaaggcaagcatggaagcgattc 1608



 Score = 44.1 bits (22), Expect = 1.3
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 335  agcacgccgccttcttcgaccgcaac 360
            |||||| |||||||||||||||||||
Sbjct: 1386 agcacgtcgccttcttcgaccgcaac 1411
to top
>emb|CT835909.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN090D05, full
           insert sequence
          Length = 714

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 285 tcttcgaccgcaacggcgacgg 306
to top
>emb|CT835887.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA060O09, full
           insert sequence
          Length = 871

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 479 tcttcgaccgcaacggcgacgg 500
to top
>emb|CT828454.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN010A13, full
           insert sequence
          Length = 860

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 479 tcttcgaccgcaacggcgacgg 500
to top
>dbj|AK243313.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100056E21,
           full insert sequence
          Length = 838

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 457 tcttcgaccgcaacggcgacgg 478
to top
>ref|NM_001069691.1| Oryza sativa (japonica cultivar-group) Os09g0412300 (Os09g0412300)
           mRNA, complete cds
          Length = 486

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 299 tcttcgaccgcaacggcgacgg 320
to top
>gb|AC186960.7| Canis Familiaris chromosome 9, clone XX-197N9, complete sequence
          Length = 186499

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 447    actcctccacctcgtcctcact 468
              ||||||||||||||||||||||
Sbjct: 130060 actcctccacctcgtcctcact 130081
to top
>emb|CR848736.10| Zebrafish DNA sequence from clone DKEY-20J3 in linkage group 12,
             complete sequence
          Length = 197662

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 704   aacatccacaggggcaagcatg 725
             ||||||||||||||||||||||
Sbjct: 39179 aacatccacaggggcaagcatg 39200
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 347      tcttcgaccgcaacggcgacgg 368
                ||||||||||||||||||||||
Sbjct: 14581136 tcttcgaccgcaacggcgacgg 14581115
to top
>emb|CR385067.9| Zebrafish DNA sequence from clone CH211-79A21 in linkage group 12,
             complete sequence
          Length = 203410

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 704   aacatccacaggggcaagcatg 725
             ||||||||||||||||||||||
Sbjct: 56623 aacatccacaggggcaagcatg 56602
to top
>gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protein mRNA, complete cds
          Length = 965

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 347 tcttcgaccgcaacggcgacgg 368
           ||||||||||||||||||||||
Sbjct: 176 tcttcgaccgcaacggcgacgg 197
to top
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1294_G06
          Length = 115468

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 347   tcttcgaccgcaacggcgacgg 368
             ||||||||||||||||||||||
Sbjct: 79425 tcttcgaccgcaacggcgacgg 79404
to top
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0643D11
          Length = 137525

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 347  tcttcgaccgcaacggcgacgg 368
            ||||||||||||||||||||||
Sbjct: 2803 tcttcgaccgcaacggcgacgg 2782
to top
>gb|AC158740.3| Echinops telfairi, clone Echinops telfairi -24265957E1, complete
             sequence
          Length = 36700

 Score = 44.1 bits (22), Expect = 1.3
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 485   taaattcatattattgttattc 506
             ||||||||||||||||||||||
Sbjct: 18204 taaattcatattattgttattc 18225
to top
>emb|CU041234.1| Mouse DNA sequence from clone WI1-1687L19 on chromosome 4, complete
            sequence
          Length = 39364

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 9    acttctctgaagctcccttct 29
            |||||||||||||||||||||
Sbjct: 3160 acttctctgaagctcccttct 3140
to top
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
          Length = 6537648

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 980     ggcagcctgttcgagcgcctg 1000
               |||||||||||||||||||||
Sbjct: 3827562 ggcagcctgttcgagcgcctg 3827542
to top
>ref|NM_001049681.1| Oryza sativa (japonica cultivar-group) Os01g0505600 (Os01g0505600)
           mRNA, complete cds
          Length = 890

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 348 cttcgaccgcaacggcgacgg 368
           |||||||||||||||||||||
Sbjct: 247 cttcgaccgcaacggcgacgg 267
to top
>emb|AL590842.1| Yersinia pestis CO92 complete genome
          Length = 4653728

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 2755143 catattattgttattatcatgaaga 2755167
to top
>gb|AE017042.1| Yersinia pestis biovar Microtus str. 91001, complete genome
          Length = 4595065

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 2525067 catattattgttattatcatgaaga 2525091
to top
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
          Length = 6264404

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 980     ggcagcctgttcgagcgcctg 1000
               |||||||||||||||||||||
Sbjct: 1807253 ggcagcctgttcgagcgcctg 1807273
to top
>gb|DQ771569.1| Synthetic construct Yersinia pestis clone FLH0135717.01X ypeR gene,
           complete sequence
          Length = 738

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 491 catattattgttattctcatgaaga 515
           ||||||||||||||| |||||||||
Sbjct: 363 catattattgttattatcatgaaga 339
to top
>gb|AC148818.15| Medicago truncatula clone mth2-39c7, complete sequence
          Length = 141746

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 489    ttcatattattgttattctca 509
              |||||||||||||||||||||
Sbjct: 118549 ttcatattattgttattctca 118569
to top
>gb|CP000308.1| Yersinia pestis Antiqua, complete genome
          Length = 4702289

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 2186953 catattattgttattatcatgaaga 2186977
to top
>gb|CP000305.1| Yersinia pestis Nepal516, complete genome
          Length = 4534590

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 2317404 catattattgttattatcatgaaga 2317428
to top
>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 1916688 catattattgttattatcatgaaga 1916664
to top
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 324     cgtgctccagcagcacgccgc 344
               |||||||||||||||||||||
Sbjct: 1426241 cgtgctccagcagcacgccgc 1426261
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1036    agccgcgcgcagtcgagaccg 1056
               |||||||||||||||||||||
Sbjct: 1408727 agccgcgcgcagtcgagaccg 1408707
to top
>gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (CAG)X10, closest to
           marker C585, genomic sequence
          Length = 230

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 348 cttcgaccgcaacggcgacgg 368
           |||||||||||||||||||||
Sbjct: 184 cttcgaccgcaacggcgacgg 204
to top
>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   ttcgaccgcaacggcgacggg 369
             |||||||||||||||||||||
Sbjct: 46332 ttcgaccgcaacggcgacggg 46352
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 134     ccgccgccatgtcgtcgtcga 154
               |||||||||||||||||||||
Sbjct: 1904917 ccgccgccatgtcgtcgtcga 1904937
to top
>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132745

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1190  actggaatttgtactgttatt 1210
             |||||||||||||||||||||
Sbjct: 39372 actggaatttgtactgttatt 39392
to top
>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139793

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1166  ttttcatctgtcttcatattt 1186
             |||||||||||||||||||||
Sbjct: 89750 ttttcatctgtcttcatattt 89770
to top
>emb|CT009535.6| M.truncatula DNA sequence from clone MTH2-68D12 on chromosome 3,
            complete sequence
          Length = 82241

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 489  ttcatattattgttattctca 509
            |||||||||||||||||||||
Sbjct: 3102 ttcatattattgttattctca 3082
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 348      cttcgaccgcaacggcgacgg 368
                |||||||||||||||||||||
Sbjct: 17577570 cttcgaccgcaacggcgacgg 17577590
to top
>gb|AF079973.1|AF079973 Yersinia pseudotuberculosis luxR homolog YpsR (ypsR) and
            N-acylhomoserine lactone synthase YpsI (ypsI) genes,
            complete cds
          Length = 4044

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 491  catattattgttattctcatgaaga 515
            ||||||||||||||| |||||||||
Sbjct: 1914 catattattgttattatcatgaaga 1890
to top
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 491     catattattgttattctcatgaaga 515
               ||||||||||||||| |||||||||
Sbjct: 2950595 catattattgttattatcatgaaga 2950619
to top
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436D06
          Length = 148246

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   cttcgaccgcaacggcgacgg 368
             |||||||||||||||||||||
Sbjct: 95142 cttcgaccgcaacggcgacgg 95162
to top
>dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16, map 22, complete
             sequences
          Length = 147114

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 606   atacctcattttttctgtaaagaaa 630
             |||||||||||||||| ||||||||
Sbjct: 83255 atacctcattttttctttaaagaaa 83279
to top
>emb|BX322795.7| Zebrafish DNA sequence from clone CH211-106E12 in linkage group 3,
             complete sequence
          Length = 173658

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 613   attttttctgtaaagaaacat 633
             |||||||||||||||||||||
Sbjct: 89915 attttttctgtaaagaaacat 89935
to top
>dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139K02, full
           insert sequence
          Length = 891

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 348 cttcgaccgcaacggcgacgg 368
           |||||||||||||||||||||
Sbjct: 248 cttcgaccgcaacggcgacgg 268
to top
>gb|AF071401.1|AF071401 Yersinia pestis transcriptional activator YpeR (ypeR) and
           homoserine lactone synthase YpeI (ypeI) genes, complete
           cds
          Length = 1375

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 491 catattattgttattctcatgaaga 515
           ||||||||||||||| |||||||||
Sbjct: 363 catattattgttattatcatgaaga 339
to top
>gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete sequence
          Length = 115770

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 489  ttcatattattgttattctca 509
            |||||||||||||||||||||
Sbjct: 9493 ttcatattattgttattctca 9513
to top
>emb|AL954334.4| Mouse DNA sequence from clone RP24-93B5 on chromosome 4, complete
             sequence
          Length = 125201

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     acttctctgaagctcccttct 29
             |||||||||||||||||||||
Sbjct: 77069 acttctctgaagctcccttct 77089
to top
>emb|AL606910.14| Mouse DNA sequence from clone RP23-282C23 on chromosome 4, complete
             sequence
          Length = 185210

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     acttctctgaagctcccttct 29
             |||||||||||||||||||||
Sbjct: 74653 acttctctgaagctcccttct 74633
to top
>emb|AL606931.6| Mouse DNA sequence from clone RP23-162H3 on chromosome 4, complete
             sequence
          Length = 108136

 Score = 42.1 bits (21), Expect = 5.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     acttctctgaagctcccttct 29
             |||||||||||||||||||||
Sbjct: 66407 acttctctgaagctcccttct 66427


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 223,441,095
Number of extensions: 12039039
Number of successful extensions: 248548
Number of sequences better than 10.0: 74
Number of HSP's gapped: 248536
Number of HSP's successfully gapped: 116
Length of query: 1312
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1289
Effective length of database: 18,503,978,556
Effective search space: 23851628358684
Effective search space used: 23851628358684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top