ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf114m12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT830827.1| Oryza sativa (indica cultivar-group) cDNA clone:... 204 2e-49
2ref|NM_001062513.1| Oryza sativa (japonica cultivar-group) Os05g... 204 2e-49
3dbj|AK103289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
4dbj|AK073969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
5gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 190 3e-45
6gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome... 190 3e-45
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 190 3e-45
8gb|AY109649.1| Zea mays CL122_1 mRNA sequence 147 4e-32
9dbj|D50679.1| Zea mays mRNA for ferredoxin-sulfite reductase pre... 125 2e-25
10dbj|AK100773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
11gb|AF403294.1|AF403294 Allium cepa clone 1-12 sulfite reductase ... 46 0.12
12gb|AF403293.1|AF403293 Allium cepa clone 1-11 sulfite reductase ... 46 0.12
13gb|AF071890.1|AF071890 Prunus armeniaca sulfite reductase (SULRE... 46 0.12
14gb|DQ083196.1| Oryza sativa (indica cultivar-group) clone 5S9B58... 44 0.48
15gb|AC106816.3| Homo sapiens chromosome 5 clone RP11-632F2, compl... 44 0.48
16gb|AC114958.2| Homo sapiens chromosome 5 clone RP11-167O18, comp... 44 0.48
17gb|AC114278.2| Homo sapiens chromosome 5 clone CTD-2154H5, compl... 44 0.48
18emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chro... 44 0.48
19gb|CP000410.1| Streptococcus pneumoniae D39, complete genome 42 1.9
20ref|NM_100733.3| Arabidopsis thaliana ATP binding / ATP-dependen... 42 1.9
21gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome... 42 1.9
22gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, c... 42 1.9
23gb|AC020654.23| Homo sapiens 12 BAC RP11-496H24 (Roswell Park Ca... 42 1.9
24dbj|AB186919.2| Danio rerio ARAF gene for serine/threonine prote... 42 1.9
25gb|AE008419.1|AE008419 Streptococcus pneumoniae R6 section 35 of... 42 1.9
26gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana... 42 1.9
27gb|AC104694.3| Homo sapiens BAC clone RP11-337M10 from 2, comple... 42 1.9
28emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on ch... 42 1.9
29gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosom... 42 1.9
30emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chr... 42 1.9
31emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chr... 42 1.9
32emb|AL928797.6| Mouse DNA sequence from clone RP23-178B19 on chr... 42 1.9
33gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.5
34gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromoso... 40 7.5
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
36gb|AC139720.1| Homo sapiens BAC clone RP11-223C24 from 4, comple... 40 7.5
37dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
38dbj|AB113355.2| Sus scrofa 433 kb genomic segment, located betwe... 40 7.5
39dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
40dbj|AB087846.1| Pisum sativum SIR mRNA for ferredoxin:sulfite re... 40 7.5
41emb|BX934776.1| Gallus gallus finished cDNA, clone ChEST722c18 40 7.5
42gb|AC155812.2| Mus musculus BAC clone RP24-139G23 from 12, compl... 40 7.5
43emb|CT571268.7| Mouse DNA sequence from clone RP23-275M21 on chr... 40 7.5 
>emb|CT830827.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA041K13, full
           insert sequence
          Length = 1008
 Score =  204 bits (103), Expect = 2e-49
 Identities = 175/199 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
           ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 503 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 562

                                                                       
Query: 62  gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
           |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 563 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 622

                                                                       
Query: 122 cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
           || |||||||| ||||||||||| ||||||||   | | | |||||||||  | ||||||
Sbjct: 623 cgtcaggaaggtgaatcttttggtagcttcacacgccggacgggatttgacaaattgaaa 682

                              
Query: 182 gaggtggtgaacaagtggg 200
           ||||| |||||||||||||
Sbjct: 683 gaggtagtgaacaagtggg 701
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>ref|NM_001062513.1| Oryza sativa (japonica cultivar-group) Os05g0503300 (Os05g0503300)
            mRNA, complete cds
          Length = 2335

 Score =  204 bits (103), Expect = 2e-49
 Identities = 175/199 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
            ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 1796 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 1855

                                                                        
Query: 62   gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 1856 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 1915

                                                                        
Query: 122  cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
            || |||||||| ||||||||||| ||||||||   | | | |||||||||  | ||||||
Sbjct: 1916 cgtcaggaaggtgaatcttttggtagcttcacacgccggacgggatttgacaaattgaaa 1975

                               
Query: 182  gaggtggtgaacaagtggg 200
            ||||| |||||||||||||
Sbjct: 1976 gaggtagtgaacaagtggg 1994
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>dbj|AK103289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124O04, full
            insert sequence
          Length = 2313

 Score =  204 bits (103), Expect = 2e-49
 Identities = 175/199 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
            ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 1797 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 1856

                                                                        
Query: 62   gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 1857 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 1916

                                                                        
Query: 122  cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
            || |||||||| ||||||||||| ||||||||   | | | |||||||||  | ||||||
Sbjct: 1917 cgtcaggaaggtgaatcttttggtagcttcacacgccggacgggatttgacaaattgaaa 1976

                               
Query: 182  gaggtggtgaacaagtggg 200
            ||||| |||||||||||||
Sbjct: 1977 gaggtagtgaacaagtggg 1995
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>dbj|AK073969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075F01, full
            insert sequence
          Length = 2336

 Score =  204 bits (103), Expect = 2e-49
 Identities = 175/199 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
            ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 1797 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 1856

                                                                        
Query: 62   gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 1857 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 1916

                                                                        
Query: 122  cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
            || |||||||| ||||||||||| ||||||||   | | | |||||||||  | ||||||
Sbjct: 1917 cgtcaggaaggtgaatcttttggtagcttcacacgccggacgggatttgacaaattgaaa 1976

                               
Query: 182  gaggtggtgaacaagtggg 200
            ||||| |||||||||||||
Sbjct: 1977 gaggtagtgaacaagtggg 1995
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09,
              complete sequence
          Length = 155525

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                          
Query: 2      cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
              ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 147549 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 147490

                                                                          
Query: 62     gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 147489 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 147430

                                              
Query: 122    cgccaggaaggcgaatcttttgggagcttcac 153
              || |||||||| ||||||||||| ||||||||
Sbjct: 147429 cgtcaggaaggtgaatcttttggtagcttcac 147398



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 163    gggatttgagcagttgaaagaggtggtgaacaagtggg 200
              |||||||||  | ||||||||||| |||||||||||||
Sbjct: 146806 gggatttgacaaattgaaagaggtagtgaacaagtggg 146769
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>gb|AC135917.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0048K05, complete sequence
          Length = 104254

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                         
Query: 2     cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
             ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 19710 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 19651

                                                                         
Query: 62    gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
             |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 19650 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 19591

                                             
Query: 122   cgccaggaaggcgaatcttttgggagcttcac 153
             || |||||||| ||||||||||| ||||||||
Sbjct: 19590 cgtcaggaaggtgaatcttttggtagcttcac 19559



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 163   gggatttgagcagttgaaagaggtggtgaacaagtggg 200
             |||||||||  | ||||||||||| |||||||||||||
Sbjct: 18967 gggatttgacaaattgaaagaggtagtgaacaagtggg 18930
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                            
Query: 2        cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
                ||||| |||||||||||||||||||||||||  ||| | || ||||| || |||||||||
Sbjct: 24633373 cagatatggcttggaggaacaccaaaccagagtaccctagctgaaacctttatgaataaa 24633314

                                                                            
Query: 62       gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
                |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| 
Sbjct: 24633313 gtgaagcttcaagatattgagaaggttttggaaccattgttttcctattggaacagcaca 24633254

                                                
Query: 122      cgccaggaaggcgaatcttttgggagcttcac 153
                || |||||||| ||||||||||| ||||||||
Sbjct: 24633253 cgtcaggaaggtgaatcttttggtagcttcac 24633222



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 163      gggatttgagcagttgaaagaggtggtgaacaagtggg 200
                |||||||||  | ||||||||||| |||||||||||||
Sbjct: 24632630 gggatttgacaaattgaaagaggtagtgaacaagtggg 24632593
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>gb|AY109649.1| Zea mays CL122_1 mRNA sequence
          Length = 3177

 Score =  147 bits (74), Expect = 4e-32
 Identities = 185/222 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
            ||||||||||| || ||||||||||||||||  ||  | |||||| | || ||| | |||
Sbjct: 1781 cagatctggctgggtggaacaccaaaccagagtacgctagcagaatcatttatggacaaa 1840

                                                                        
Query: 62   gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
            ||||||||| | || || ||||||||||||||||| || ||| ||||||||||| |||| 
Sbjct: 1841 gtgaagcttgatgacatcgagaaggttttggaacctctctttacctattggaatggcaca 1900

                                                                        
Query: 122  cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
            ||||||||||||||||||||||| |||||||| ||| |||  ||||| ||  | ||||||
Sbjct: 1901 cgccaggaaggcgaatcttttggaagcttcacaaaccgaacaggattcgacaaattgaaa 1960

                                                      
Query: 182  gaggtggtgaacaagtgggagggggcaacatcagccgcatga 223
            ||||| ||||| |||||||  | | || ||||||||||||||
Sbjct: 1961 gaggtagtgaataagtgggcagagtcaccatcagccgcatga 2002
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>dbj|D50679.1| Zea mays mRNA for ferredoxin-sulfite reductase precursor, complete
            cds
          Length = 2370

 Score =  125 bits (63), Expect = 2e-25
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagatctggcttggaggaacaccaaaccagaccaccttggcagaaactttcatgaataaa 61
            ||||||||||| || ||||||||||||||||  ||  | |||||| | || ||| | || 
Sbjct: 1781 cagatctggctgggtggaacaccaaaccagagtacgctagcagaatcatttatggacaag 1840

                                                                        
Query: 62   gtgaagcttcaagatattgagaaggttttggaaccactgttttcctattggaatagcacg 121
            ||||||||| | || || |||||||||||||| || || ||| ||||||||||| |||| 
Sbjct: 1841 gtgaagcttgatgacatcgagaaggttttggagcctctctttacctattggaatggcaca 1900

                                                                        
Query: 122  cgccaggaaggcgaatcttttgggagcttcacgaacagaatgggatttgagcagttgaaa 181
            ||||||||||||||||||||||| |||||||| ||| |||  ||||| ||  | ||||||
Sbjct: 1901 cgccaggaaggcgaatcttttggaagcttcacaaaccgaacaggattcgacaaattgaaa 1960

                               
Query: 182  gaggtggtgaacaagtggg 200
            ||||| ||||| |||||||
Sbjct: 1961 gaggtagtgaataagtggg 1979
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>dbj|AK100773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120B12, full
            insert sequence
          Length = 1870

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 2    cagatctggcttggaggaacaccaaaccaga 32
            ||||| |||||||||||||||||||||||||
Sbjct: 1747 cagatatggcttggaggaacaccaaaccaga 1777
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>gb|AF403294.1|AF403294 Allium cepa clone 1-12 sulfite reductase mRNA, partial cds
          Length = 643

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 2   cagatctggcttggaggaacaccaaaccaga 32
           ||||| ||||||||||||||||| |||||||
Sbjct: 84  cagatatggcttggaggaacacctaaccaga 114
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>gb|AF403293.1|AF403293 Allium cepa clone 1-11 sulfite reductase mRNA, partial cds
          Length = 619

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 2   cagatctggcttggaggaacaccaaaccaga 32
           ||||| ||||||||||||||||| |||||||
Sbjct: 84  cagatatggcttggaggaacacctaaccaga 114
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>gb|AF071890.1|AF071890 Prunus armeniaca sulfite reductase (SULRED) mRNA, partial cds
          Length = 1425

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 2   cagatctggcttggaggaacacc 24
           |||||||||||||||||||||||
Sbjct: 713 cagatctggcttggaggaacacc 735
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>gb|DQ083196.1| Oryza sativa (indica cultivar-group) clone 5S9B58 mRNA sequence
          Length = 718

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 163 gggatttgagcagttgaaagaggtggtgaacaagtggg 200
           |||||||||  | ||||||||||| |||||||||||||
Sbjct: 466 gggatttgacaaattgaaagaggtagtgaacaagtggg 503
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>gb|AC106816.3| Homo sapiens chromosome 5 clone RP11-632F2, complete sequence
          Length = 54807

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 420   cttttcgtgtgtgcttgtatgg 441
             ||||||||||||||||||||||
Sbjct: 45993 cttttcgtgtgtgcttgtatgg 45972
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>gb|AC114958.2| Homo sapiens chromosome 5 clone RP11-167O18, complete sequence
          Length = 79173

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 420   cttttcgtgtgtgcttgtatgg 441
             ||||||||||||||||||||||
Sbjct: 70608 cttttcgtgtgtgcttgtatgg 70587
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>gb|AC114278.2| Homo sapiens chromosome 5 clone CTD-2154H5, complete sequence
          Length = 99759

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 420   cttttcgtgtgtgcttgtatgg 441
             ||||||||||||||||||||||
Sbjct: 84815 cttttcgtgtgtgcttgtatgg 84836
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>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
             complete sequence
          Length = 159620

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    agaaactttcatgaataaagtg 64
             ||||||||||||||||||||||
Sbjct: 95199 agaaactttcatgaataaagtg 95220
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>gb|CP000410.1| Streptococcus pneumoniae D39, complete genome
          Length = 2046115

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     cttggcagaaactttcatgaa 57
              |||||||||||||||||||||
Sbjct: 401072 cttggcagaaactttcatgaa 401052
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>ref|NM_100733.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ DNA
            binding / helicase/ nucleic acid binding (AT1G08600)
            mRNA, complete cds
          Length = 4556

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   gagaaggttttggaaccactg 100
            |||||||||||||||||||||
Sbjct: 4162 gagaaggttttggaaccactg 4142
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>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence
          Length = 203548

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   ttttgctgggagacatacctg 280
             |||||||||||||||||||||
Sbjct: 93190 ttttgctgggagacatacctg 93170
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>gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, complete sequence
          Length = 193909

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 451   ttagcccttttgtttaacttg 471
             |||||||||||||||||||||
Sbjct: 46103 ttagcccttttgtttaacttg 46123
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>gb|AC020654.23| Homo sapiens 12 BAC RP11-496H24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    tttggaaccactgttttccta 108
             |||||||||||||||||||||
Sbjct: 94525 tttggaaccactgttttccta 94545



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     tttggaaccactgttttccta 108
              |||||||||||||||||||||
Sbjct: 105782 tttggaaccactgttttccta 105802
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>dbj|AB186919.2| Danio rerio ARAF gene for serine/threonine protein kinase ARAF,
            complete cds
          Length = 9173

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 40   ggcagaaactttcatgaataa 60
            |||||||||||||||||||||
Sbjct: 1557 ggcagaaactttcatgaataa 1537
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>gb|AE008419.1|AE008419 Streptococcus pneumoniae R6 section 35 of 184 of the complete genome
          Length = 10924

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   cttggcagaaactttcatgaa 57
            |||||||||||||||||||||
Sbjct: 7181 cttggcagaaactttcatgaa 7161
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>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
             complete sequence
          Length = 133843

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    gagaaggttttggaaccactg 100
             |||||||||||||||||||||
Sbjct: 31142 gagaaggttttggaaccactg 31122
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>gb|AC104694.3| Homo sapiens BAC clone RP11-337M10 from 2, complete sequence
          Length = 55177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 467   acttgagggagaaaataaatt 487
             |||||||||||||||||||||
Sbjct: 27503 acttgagggagaaaataaatt 27523
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>emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on chromosome X, complete
             sequence
          Length = 81593

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    ttggcagaaactttcatgaat 58
             |||||||||||||||||||||
Sbjct: 68229 ttggcagaaactttcatgaat 68249
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>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence
          Length = 197515

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    ttttgctgggagacatacctg 280
              |||||||||||||||||||||
Sbjct: 173205 ttttgctgggagacatacctg 173225
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>emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chromosome X, complete
              sequence
          Length = 216754

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    cagggactcttgggatataaa 309
              |||||||||||||||||||||
Sbjct: 183320 cagggactcttgggatataaa 183300
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>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   acgaacagaatgggatttgag 172
             |||||||||||||||||||||
Sbjct: 84217 acgaacagaatgggatttgag 84197
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>emb|AL928797.6| Mouse DNA sequence from clone RP23-178B19 on chromosome 2, complete
              sequence
          Length = 166185

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 147    gcttcacgaacagaatgggatttga 171
              |||||| ||||||||||||||||||
Sbjct: 106834 gcttcaagaacagaatgggatttga 106858
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 416     ttctcttttcgtgtgtgctt 435
               ||||||||||||||||||||
Sbjct: 4471100 ttctcttttcgtgtgtgctt 4471119
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>gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromosome ul, complete sequence
          Length = 215430

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    gcatgagagcttttttgctgtaca 241
              ||||||||||||| ||||||||||
Sbjct: 166732 gcatgagagctttattgctgtaca 166755
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 421     ttttcgtgtgtgcttgtatg 440
               ||||||||||||||||||||
Sbjct: 5868432 ttttcgtgtgtgcttgtatg 5868451
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>gb|AC139720.1| Homo sapiens BAC clone RP11-223C24 from 4, complete sequence
          Length = 160940

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    ggagaaaataaattccttgc 493
              ||||||||||||||||||||
Sbjct: 142317 ggagaaaataaattccttgc 142336
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0056C19
          Length = 147739

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   ttttcgtgtgtgcttgtatg 440
             ||||||||||||||||||||
Sbjct: 46653 ttttcgtgtgtgcttgtatg 46672
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>dbj|AB113355.2| Sus scrofa 433 kb genomic segment, located between the non-classical and
              classical SLA class I gene cluster, clone: BAC 353A11
          Length = 144448

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    gagaggaggaaacttgtcaa 333
              ||||||||||||||||||||
Sbjct: 116681 gagaggaggaaacttgtcaa 116662
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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544H11
          Length = 178376

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   ttttcgtgtgtgcttgtatg 440
             ||||||||||||||||||||
Sbjct: 98234 ttttcgtgtgtgcttgtatg 98253
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>dbj|AB087846.1| Pisum sativum SIR mRNA for ferredoxin:sulfite reductase, partial
           cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 49  tttcatgaataaagtgaagcttcaagatattgagaaggttttggaaccactgtttt 104
           ||||||| | || ||||||||||||||  |||| || |||||||| ||| ||||||
Sbjct: 610 tttcatggacaaggtgaagcttcaagaccttgaaaaagttttggagccattgtttt 665
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>emb|BX934776.1| Gallus gallus finished cDNA, clone ChEST722c18
          Length = 846

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 tgaaagaggtggtgaacaag 196
           ||||||||||||||||||||
Sbjct: 203 tgaaagaggtggtgaacaag 222
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>gb|AC155812.2| Mus musculus BAC clone RP24-139G23 from 12, complete sequence
          Length = 153018

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cagaaactttcatgaataaa 61
              ||||||||||||||||||||
Sbjct: 133463 cagaaactttcatgaataaa 133482
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>emb|CT571268.7| Mouse DNA sequence from clone RP23-275M21 on chromosome 12, complete
             sequence
          Length = 178441

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    cagaaactttcatgaataaa 61
             ||||||||||||||||||||
Sbjct: 72262 cagaaactttcatgaataaa 72243


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 101,445,041
Number of extensions: 5357307
Number of successful extensions: 131215
Number of sequences better than 10.0: 43
Number of HSP's gapped: 131209
Number of HSP's successfully gapped: 47
Length of query: 514
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 492
Effective length of database: 18,508,616,841
Effective search space: 9106239485772
Effective search space used: 9106239485772
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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