ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf114k06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068731:Os03g0795100 127 2e-29
2AK067304:Os07g0172900 116 3e-26
3Os01g0698900:Os01g0698900 32 0.68
4Os01g0199100:Os01g0199100 30 4.4
5AK108829:Os05g0286100 30 4.4
6Os05g0353600:Os05g0353600 29 7.6
7Os04g0573300:Os04g0573300 29 7.6
8AK120947: 29 7.6
9AK103364:Os01g0229300 29 7.6
10AF326768:Os01g0229300 29 7.6
11Os02g0625100:Os02g0625100 28 9.9

>AK068731:Os03g0795100 |
          Length = 158
 Score =  127 bits (318), Expect = 2e-29
 Identities = 75/159 (47%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
 Frame = +1

Query: 421 MRLSHCESYCAAPLCYIPCLXXXXXXXXXXXXXXXXXXXXXXXXXI--EDKPPPVQKFEL 594
           MRLSHCESYC  PLCYIPCL                            EDKPPPVQK E 
Sbjct: 1   MRLSHCESYCGPPLCYIPCLPKSKDAAGDAAHKSKDAAAADAVPVAAAEDKPPPVQKIEA 60

Query: 595 VAAP----------AXXXXXXXXXXXXXTTXXXXXXXXXXKSNLKKANCGDDVVIAPKGN 744
             A                                     KSNLKKA+C D    A KGN
Sbjct: 61  AVAEKDGDDSKEVDGDEEEEEDDDDVKTAVAVAAPPPAPLKSNLKKADCADSKC-AEKGN 119

Query: 745 VKWLDLLGKDLTEVKEFEPSESGDSMDDEGISTCVCVIQ 861
           VKWLDLLGKDLTEVKEFEPSESGDSMD++ I+ CVC IQ
Sbjct: 120 VKWLDLLGKDLTEVKEFEPSESGDSMDEDDIAECVCAIQ 158



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>AK067304:Os07g0172900 |
          Length = 147

 Score =  116 bits (291), Expect = 3e-26
 Identities = 69/150 (46%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
 Frame = +1

Query: 421 MRLSHCESYCAAPLCYIPCLXXXXXXXXXXXXXXXXXXXXXXXXXI---EDKPPPVQKFE 591
           MR SHCESYCA PLC +PCL                             EDKPPP+QK E
Sbjct: 1   MRSSHCESYCAPPLCNLPCLPKSKDDSTTDDAAAASSPTPATVVAAAFAEDKPPPLQKIE 60

Query: 592 LVAAPAXXXXXXXXXXXXXTTXXXXXXXXXXKSNLKKANCGDDVVIAPKGNVKWLDLLGK 771
             A  A                         KS+LKK NC D   +  KGNVKW+DLLGK
Sbjct: 61  -AAVTANKDHDDDGDGGGDEGSKEVVVTVVPKSSLKKTNCEDSKNVV-KGNVKWMDLLGK 118

Query: 772 DLTEVKEFEPSESGDSMDDEGISTCVCVIQ 861
           DLT+VKEFEPSESGDS D++G +TC+CVIQ
Sbjct: 119 DLTQVKEFEPSESGDSDDEDG-NTCICVIQ 147



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>Os01g0698900:Os01g0698900 |
          Length = 382

 Score = 32.3 bits (72), Expect = 0.68
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +3

Query: 654 GRGAGACATTQEQPQ-EGQLRRRRGNCPQRQCEVA*FAGEGSHRGQ 788
           GR AG C     + +  G+ RR+ G  P+R CE A  AG GS RG+
Sbjct: 35  GRSAGRCGRGGGRRRGNGEARRQPGGAPRRPCE-ARDAGGGSDRGR 79



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>Os01g0199100:Os01g0199100 |
          Length = 258

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 651 DGRGAG-ACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDG 824
           DG G G A A  +E  Q G+ R RR +  +        A +GS  G+ V A+  RRL G
Sbjct: 114 DGSGGGEAAAGAEEVQQRGEWRGRRRHSGE--------ASDGSGGGETVGAEEARRLVG 164



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>AK108829:Os05g0286100 |
          Length = 318

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -3

Query: 941 ETGTGNECWAPPLIFTQMYMSLPPWVHWMTHTHVEMPSSSIESPDSLGSNSLTSVRSFPS 762
           E GTG E    P     M    PP +  + H +   P S          NS+  V ++P+
Sbjct: 101 EDGTGGESHGMPPNQNYMIQPCPPQIGTLQHAYSPNPRSGSILAADTNPNSICDVVAYPA 160

Query: 761 KS 756
           +S
Sbjct: 161 RS 162



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>Os05g0353600:Os05g0353600 |
          Length = 365

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 357 LWSPGVPIGRAPGVLTQFPDF 419
           +WSP V  GRA G LTQ P F
Sbjct: 118 MWSPWVRRGRATGRLTQSPSF 138



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>Os04g0573300:Os04g0573300 |
          Length = 776

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 348 GALLWSPGVPIGRAPGVLTQFP 413
           GAL WS GV I R+P VLT  P
Sbjct: 753 GALSWSDGVHIVRSPVVLTWLP 774



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>AK120947: |
          Length = 723

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 409 NWVSTPGARPIGTPGLHRSAPRRSNLSPGAD 317
           N+++ P A P GTP + +SAP +S   PG D
Sbjct: 541 NYMNDPNA-PGGTPVMQQSAPDKSRQRPGMD 570



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>AK103364:Os01g0229300 |
          Length = 1005

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 1012 IKTAENPHPPSTTSTKQLWRHVLMKPVQATNAGRPP*FSH 893
            + T E+PHP +  ST++   H+ M+ +  T A   P FSH
Sbjct: 707  LTTQESPHPQNFQSTQEQQTHLRMEEM-VTIAASSPLFSH 745



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>AF326768:Os01g0229300 |
          Length = 1057

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 1012 IKTAENPHPPSTTSTKQLWRHVLMKPVQATNAGRPP*FSH 893
            + T E+PHP +  ST++   H+ M+ +  T A   P FSH
Sbjct: 695  LTTQESPHPQNFQSTQEQQTHLRMEEM-VTIAASSPLFSH 733



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>Os02g0625100:Os02g0625100 |
          Length = 465

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 906 GGRPAFVACTGFISTCRHSCLVDVVEGGWGF 998
           G RP  +   G +S C HS LVD  EG W F
Sbjct: 333 GVRPNDITFIGLLSACSHSGLVD--EGRWLF 361


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,530,262
Number of extensions: 534588
Number of successful extensions: 1704
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1697
Number of HSP's successfully gapped: 13
Length of query: 401
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 298
Effective length of database: 11,275,632
Effective search space: 3360138336
Effective search space used: 3360138336
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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