ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf114k06 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g58090:12003.t05070:unspliced-genomic expressed protein| Length = 2877 Score = 65.7 bits (137), Expect(5) = 2e-31 Identities = 30/53 (56%), Positives = 36/53 (67%) Frame = +3 / +2 Query: 645 EDDGRGAGACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAK 803 ED G G GA + + E+ E RR+ +RQCEVA FAGEGSHRGQG+RAK Sbjct: 617 EDGGGGGGAASGSAEE*PEEGRLRRQQVRRERQCEVAGFAGEGSHRGQGIRAK 775 Score = 60.6 bits (126), Expect(5) = 2e-31 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +1 / +3 Query: 409 SPTLMRLSHCESYCAAPLCYIPCL 480 SP+LMRLSHCESYC PLCYIPCL Sbjct: 348 SPSLMRLSHCESYCGPPLCYIPCL 419 Score = 41.4 bits (84), Expect(5) = 2e-31 Identities = 16/26 (61%), Positives = 21/26 (80%) Frame = +1 / +3 Query: 793 FEPSESGDSMDDEGISTCVCVIQ*TQ 870 F SESGDSMD++ I+ CVC IQ*++ Sbjct: 2244 FSLSESGDSMDEDDIAECVCAIQ*SR 2321 Score = 29.9 bits (59), Expect(5) = 2e-31 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +1 / +3 Query: 559 EDKPPPVQKFELVAA 603 EDKPPPVQK E A Sbjct: 504 EDKPPPVQKIEAAVA 548 Score = 25.4 bits (49), Expect(5) = 2e-31 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +2 / +1 Query: 935 RFHQYMPP*LLSRC 976 +FHQYMPP L C Sbjct: 2467 QFHQYMPPP*LPSC 2508 Score = 55.6 bits (115), Expect(3) = 3e-21 Identities = 24/29 (82%), Positives = 26/29 (89%) Frame = -3 / -3 Query: 494 SLDLGRQGM*QRGAAQ*LSQCESLIKVGE 408 SLDLGRQGM* RG Q*LSQCESLIK+G+ Sbjct: 433 SLDLGRQGM*HRGGPQ*LSQCESLIKLGD 347 Score = 55.1 bits (114), Expect(3) = 3e-21 Identities = 23/25 (92%), Positives = 23/25 (92%) Frame = -3 / -3 Query: 803 LGSNSLTSVRSFPSKSSHFTLPLGA 729 LGSNSLTSVRSFPSKSSHFTLP A Sbjct: 775 LGSNSLTSVRSFPSKSSHFTLPFSA 701 Score = 38.2 bits (77), Expect(3) = 3e-21 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 / -3 Query: 863 HWMTHTHVEMPSSSIESPDSL 801 HW+ TH M SSS+ESPDSL Sbjct: 2314 HWIAQTHSAMSSSSMESPDSL 2252 Score = 58.8 bits (122), Expect(2) = 1e-10 Identities = 24/28 (85%), Positives = 24/28 (85%) Frame = +1 / +3 Query: 718 DVVIAPKGNVKWLDLLGKDLTEVKEFEP 801 D A KGNVKWLDLLGKDLTEVKEFEP Sbjct: 690 DSKCAEKGNVKWLDLLGKDLTEVKEFEP 773 Score = 27.6 bits (54), Expect(2) = 1e-10 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +3 / +2 Query: 654 GRGAGACATTQEQPQEGQLRRRR 722 G G A + +E P+EG+LRR++ Sbjct: 629 GGGGAASGSAEE*PEEGRLRRQQ 697 Score = 51.5 bits (106), Expect(2) = 9e-08 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +2 / +1 Query: 731 PPKAM*SGLICWGRISPRSRSSSQ 802 P KAM*SG ICWGRISPRSR+SSQ Sbjct: 703 PRKAM*SGWICWGRISPRSRNSSQ 774 Score = 25.4 bits (49), Expect(2) = 9e-08 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 / +3 Query: 685 KSNLKKANCGD 717 KSNLKKA+C D Sbjct: 660 KSNLKKADCAD 692 Score = 53.3 bits (110), Expect(2) = 1e-06 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = -2 / -2 Query: 801 WLELLDLGEILPQQIKPLHIAFGG 730 WLE LDLGEILPQQI+PLHIAF G Sbjct: 773 WLEFLDLGEILPQQIQPLHIAFLG 702 Score = 24.9 bits (48), Expect(2) = 1e-06 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 / -2 Query: 441 LTVREPHQSRGIGSAHRERGRSE 373 LTVREPHQ+ G RS+ Sbjct: 380 LTVREPHQTWGFLHREPRPNRSQ 312 Score = 51.0 bits (105), Expect = 2e-05 Identities = 22/31 (70%), Positives = 22/31 (70%) Frame = -1 / -1 Query: 829 HRPSSLRIRLARTP*PR*DPSPANQATSHCL 737 HR LAR P*PR*DPSPAN ATSHCL Sbjct: 801 HRERDEMYTLARIP*PR*DPSPANPATSHCL 709
>LOC_Os07g07646:12007.t04721:unspliced-genomic expressed protein| Length = 2769 Score = 54.7 bits (113), Expect(4) = 1e-20 Identities = 20/22 (90%), Positives = 22/22 (100%) Frame = +1 / +1 Query: 736 KGNVKWLDLLGKDLTEVKEFEP 801 KGNVKW+DLLGKDLT+VKEFEP Sbjct: 769 KGNVKWMDLLGKDLTQVKEFEP 834 Score = 50.6 bits (104), Expect(4) = 1e-20 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = +1 / +1 Query: 403 PNSPTLMRLSHCESYCAAPLCYIPCL 480 P LMR SHCESYCA PLC +PCL Sbjct: 433 PQFAILMRSSHCESYCAPPLCNLPCL 510 Score = 27.2 bits (53), Expect(4) = 1e-20 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +1 / +1 Query: 559 EDKPPPVQKFE 591 EDKPPP+QK E Sbjct: 598 EDKPPPLQKIE 630 Score = 22.6 bits (43), Expect(4) = 1e-20 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 / +1 Query: 685 KSNLKKANCGD 717 KS+LKK NC D Sbjct: 721 KSSLKKTNCED 753 Score = 48.7 bits (100), Expect(3) = 1e-11 Identities = 22/30 (73%), Positives = 22/30 (73%) Frame = -3 / -2 Query: 803 LGSNSLTSVRSFPSKSSHFTLPLGAITTSS 714 LGSNSLT VRSFPSKS HFTLP SS Sbjct: 836 LGSNSLT*VRSFPSKSIHFTLPFTTFLLSS 747 Score = 41.8 bits (85), Expect(3) = 1e-11 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = -3 / -2 Query: 494 SLDLGRQGM*QRGAAQ*LSQCESLIKVGELG 402 SLDLGRQG +G AQ*LSQ E LIK+ G Sbjct: 524 SLDLGRQGRLHKGGAQ*LSQWELLIKMANWG 432 Score = 25.4 bits (49), Expect(3) = 1e-11 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -3 / -3 Query: 836 MPSSSIESPDSL 801 +PSSS ESPDSL Sbjct: 2500 LPSSSSESPDSL 2465 Score = 33.6 bits (67), Expect(2) = 0.10 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +2 / +2 Query: 737 KAM*SGLICWGRISPRSRSSSQ 802 +AM*+G ICWGRIS + ++ SQ Sbjct: 770 RAM*NGWICWGRISLKLKNLSQ 835 Score = 27.2 bits (53), Expect(2) = 0.10 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / +1 Query: 803 ANPETRWTMRASRRACASSNEPKEEGSCTF 892 AN ETR T A+ + +SS +P + C F Sbjct: 2467 ANLETRMTKTATPASVSSSKQPLGDHPCKF 2556 Score = 38.2 bits (77), Expect = 0.12 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -2 / -1 Query: 801 WLELLDLGEILPQQIKPLHIA 739 WL+ +L EILPQQI P HIA Sbjct: 834 WLKFFNLSEILPQQIHPFHIA 772 Score = 30.9 bits (61), Expect(2) = 0.62 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / +3 Query: 729 CPQRQCEVA*FAGEGSHRGQGVRAK 803 C + QCE+ FAGEGSH + AK Sbjct: 762 CGEGQCEMDGFAGEGSHSS*RI*AK 836 Score = 27.2 bits (53), Expect(2) = 0.62 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 / +3 Query: 823 DDEGISTCVCVIQ* 864 DDE +TC+CVIQ* Sbjct: 2484 DDEDGNTCICVIQ* 2525
>LOC_Os01g55070:12001.t04920:unspliced-genomic expressed protein| Length = 2358 Score = 34.1 bits (68), Expect(2) = 0.089 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +2 / +2 Query: 731 PPKAM*SGLICWGRISPRSRSSSQANPETRWTMRASRRAC 850 PP+A+ S C R SPR RS S+ + A+RR+C Sbjct: 83 PPRALRSSRACSPRASPRRRSPSRRSSPRLRPAPAARRSC 202 Score = 26.7 bits (52), Expect(2) = 0.089 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 / +1 Query: 897 EN*GGRPAFVACTGFISTCRHSCLV 971 E G +P VA T +S CRH LV Sbjct: 1693 EEDGFKPDKVAITAVLSACRHGGLV 1767
>LOC_Os10g32720:12010.t02580:unspliced-genomic plasma membrane associated protein, putative, expressed| Length = 793 Score = 35.9 bits (72), Expect = 0.58 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +3 / +2 Query: 699 EGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR 827 +G RRRRG +R+ VA G+HR GV A +R R Sbjct: 416 QGDPRRRRGGARRRRARVADARAGGAHRDAGVHAAPLRAAAAR 544
>LOC_Os08g38680:12008.t03603:unspliced-genomic hypothetical protein| Length = 3159 Score = 35.4 bits (71), Expect = 0.80 Identities = 17/47 (36%), Positives = 20/47 (42%) Frame = +3 / +3 Query: 678 TTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRL 818 TT+ +G RRR C + C G G H GVR R R L Sbjct: 297 TTKSGRSQGSARRRSARCQRGSCNGYSSCGTGRHGSCGVRVTRARPL 437
>LOC_Os03g08380:12003.t00695:unspliced-genomic multidrug resistance protein 11, putative, expressed| Length = 5424 Score = 29.5 bits (58), Expect(2) = 0.83 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +3 / +3 Query: 762 AGEGSHRGQGVRAKRIRRLDG 824 AGEG H G G R +R R +DG Sbjct: 4272 AGEGRHDGGGGRREREREVDG 4334 Score = 29.0 bits (57), Expect(2) = 0.83 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +2 / +1 Query: 347 WRAPVEPGGSDRPRSRCADPIP 412 WR+ PG S RSR A P P Sbjct: 1765 WRSGTAPGSSPTARSRAATPSP 1830
>LOC_Os06g07500:12006.t00633:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3321 Score = 32.2 bits (64), Expect(2) = 0.98 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +3 / +3 Query: 657 RGAGACATTQEQPQEGQLRRRRGNCPQRQC 746 RGAG + + G RR+R NCP R C Sbjct: 2691 RGAGEGGGREGAQRRGGRRRKRVNCPPRSC 2780 Score = 25.4 bits (49), Expect(2) = 0.98 Identities = 11/35 (31%), Positives = 12/35 (34%) Frame = +3 / +2 Query: 264 CCSGPKAAAWXXXXXXXXSAPGLRFDRRGALLWSP 368 C +G W S P R RRG W P Sbjct: 1979 CWTGSMPRWWPCRRSARSSTPHGRVSRRGGARWRP 2083
>LOC_Os01g71474:12001.t06443:unspliced-genomic lichenase-2 precursor, putative, expressed| Length = 3841 Score = 35.0 bits (70), Expect = 1.1 Identities = 21/57 (36%), Positives = 25/57 (43%) Frame = +3 / -2 Query: 711 RRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR*GHLDVRVRHPMNPRRKA 881 RRRR CP+R+ G RG +R RR GR G R R P R+A Sbjct: 2826 RRRRPRCPRRRTGTGPSGRPGCSRGSRRPRRRSRRAPGRGGRSWARRRRRGCPCRRA 2656
>LOC_Os11g07960:12011.t00687:unspliced-genomic anthranilate N-benzoyltransferase protein 1, putative, expressed| Length = 2041 Score = 35.0 bits (70), Expect = 1.1 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +2 / -1 Query: 752 GLICWGRISPRSRSSSQANPETRWTMRASRRACASSNEP 868 GL+CW R ++ A+ +RW +R++ + AS P Sbjct: 127 GLLCWPRRCRGEKARGHASASSRWALRSNTPSLASHGRP 11
>LOC_Os01g40700:12001.t03593:unspliced-genomic expressed protein| Length = 2442 Score = 35.0 bits (70), Expect = 1.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 / +3 Query: 745 VKWLDLLGKDLTEVKEFEPSESGDSMDDEGISTCVC 852 V+W D GK+L E++EFE S + C+C Sbjct: 1524 VQWTDTCGKELFEIREFEARYSMKILSPSPYVRCIC 1631
>LOC_Os11g07590:12011.t00650:unspliced-genomic conserved hypothetical protein| Length = 543 Score = 29.9 bits (59), Expect(2) = 1.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 / -3 Query: 994 PHPPSTTSTKQLWRHVLMKPVQATNAGRPP 905 P PPSTTS+ + RH P +A PP Sbjct: 151 PPPPSTTSSPRRRRHRRRHPPRAAGHSPPP 62 Score = 24.9 bits (48), Expect(2) = 1.1 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = -2 / -3 Query: 1107 RPDRSVETRTVSTPADKAPPHTEELDR 1027 RP S +R +TPA PP T R Sbjct: 400 RPPPSSRSRGSTTPASPRPPSTRPTPR 320
>LOC_Os02g37000:12002.t03338:unspliced-genomic mitochondrial prohibitin complex protein 1, putative, expressed| Length = 1123 Score = 33.1 bits (66), Expect(2) = 1.2 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +2 / +1 Query: 731 PPKAM*SGLICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGS 883 PP + S R SP +RSS + + +RW R +SS P G+ Sbjct: 553 PPSSTSSSTTSPSRTSPTARSSPRPSRRSRWRSRRPSGPGSSSRAPSRRGA 705 Score = 22.6 bits (43), Expect(2) = 1.2 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +1 / +1 Query: 349 ARSCGARGFRSAALPVC*PNSPTLMRLSHCESYCAAP 459 A C RS+ P++PT RLS S A P Sbjct: 448 ATRCSRPSSRSSTPTSSSPSAPTSPRLSATPSSAAPP 558
>LOC_Os04g41280:12004.t03688:unspliced-genomic protein binding protein, putative, expressed| Length = 7786 Score = 28.1 bits (55), Expect(2) = 1.4 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +2 / +2 Query: 770 RISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGS 883 R + + ++ A P + W R CASS+ P G+ Sbjct: 6929 RAATSTSRTATATPRSCWRRGKGTRPCASSSSPTARGA 7042 Score = 23.5 bits (45), Expect(2) = 1.4 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +3 / +2 Query: 690 QPQEGQLRRRRGNCPQRQC 746 +P + R RRG C R C Sbjct: 6773 RPSGWRSRARRGTCSSRSC 6829
>LOC_Os09g37860:12009.t03260:unspliced-genomic proliferating-cell nucleolar antigen p120, putative, expressed| Length = 5315 Score = 34.5 bits (69), Expect = 1.5 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = +2 / -1 Query: 776 SPRSRSSSQANPETRWTMRASRRACASSNEPKEEGS 883 +P S +S+++P++ + SR C SS+E E+GS Sbjct: 323 APESEGASRSDPDSSSSTSWSRSCCCSSSESSEDGS 216
>LOC_Os06g50410:12006.t04725:unspliced-genomic conserved hypothetical protein| Length = 1227 Score = 33.6 bits (67), Expect(2) = 1.8 Identities = 18/48 (37%), Positives = 22/48 (45%) Frame = -1 / -3 Query: 844 TSRCPHRPSSLRIRLARTP*PR*DPSPANQATSHCLWGQLPRRRRSWP 701 T R P RP+S R + P PS A +W + PRRRR P Sbjct: 904 TPRAPPRPASRRRARSAASSPSPPPSCPTTARRPRVWRRTPRRRRRSP 761 Score = 21.7 bits (41), Expect(2) = 1.8 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = -2 / -3 Query: 396 HRERGRSEPP 367 HR R RS PP Sbjct: 226 HRRRARSRPP 197
>LOC_Os07g40860:12007.t03745:unspliced-genomic vegetative cell wall protein gp1 precursor, putative, expressed| Length = 1145 Score = 34.1 bits (68), Expect = 2.1 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -3 / +2 Query: 833 PSSSIESPDSLGSNSLTSVRSFPSKSSHFTLP 738 P S P + +L S RSFPS SH TLP Sbjct: 383 PPSCRSCPSTKSRRTLPSCRSFPSTRSHHTLP 478
>LOC_Os07g07670:12007.t00645:unspliced-genomic expressed protein| Length = 1068 Score = 29.5 bits (58), Expect(2) = 2.1 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -3 / -3 Query: 767 PSKSSHFTLPLGAITTSSP 711 PS SS PLG +TTSSP Sbjct: 658 PSPSSSGAAPLGTVTTSSP 602 Score = 25.4 bits (49), Expect(2) = 2.1 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = -2 / -2 Query: 435 VREPHQSRGIGSAHRERGRSEPP 367 VREP Q G R RG PP Sbjct: 317 VREPPQLLPAGHPRRRRGHPAPP 249
>LOC_Os07g09420:12007.t00817:unspliced-genomic ATPase 2, putative, expressed| Length = 1753 Score = 32.2 bits (64), Expect(2) = 2.5 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 / -1 Query: 764 WGRISPRSRSSSQANPETRWTMRASRRA 847 WGR SPR+ S S++ E R R++R A Sbjct: 619 WGRYSPRTTSRSRSRKERR*NRRSARAA 536 Score = 23.1 bits (44), Expect(2) = 2.5 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +3 / -2 Query: 702 GQLRRRRGNCPQR 740 G RRRRG+C +R Sbjct: 1467 GSRRRRRGSCRRR 1429
>LOC_Os02g46130:12002.t04200:unspliced-genomic aspartyl-tRNA synthetase, putative, expressed| Length = 5383 Score = 26.7 bits (52), Expect(2) = 2.7 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +3 / +2 Query: 714 RRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR 827 RRR P RQ E H + VRA+R RR G+ Sbjct: 563 RRRAGDPARQQEDGLRCAAREHEHRPVRARRQRRRRGQ 676 Score = 24.0 bits (46), Expect(2) = 2.7 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 / +2 Query: 663 AGACATTQEQPQEGQLRRR 719 A A A + +P GQLRRR Sbjct: 407 AAAAAGRRRRPLRGQLRRR 463
>LOC_Os08g35319:12008.t004317:unspliced-genomic expressed protein| Length = 1212 Score = 33.6 bits (67), Expect = 2.8 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +3 / +3 Query: 654 GRGAGACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDG 824 GR G+ +++ G RR RQC + AG+G RG G R R R G Sbjct: 537 GRCGGSTSSSTAFLLRGSSRRSAPRGQIRQCRIRSSAGDGGRRGGGQRLSRCCRHRG 707
>LOC_Os02g35540:12002.t03192:unspliced-genomic expressed protein| Length = 2650 Score = 33.6 bits (67), Expect = 2.8 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 / +3 Query: 914 APPLIFTQMYMSLPPWVHWMTH 849 +PP+IFT + + W HW+T+ Sbjct: 1446 SPPMIFTAAWSQVDVWTHWITY 1511
>LOC_Os10g11660:12010.t00961:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2995 Score = 33.6 bits (67), Expect = 2.8 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +1 / +2 Query: 424 RLSHCESYCAAPLCYIPC 477 R SH E YC+APL IPC Sbjct: 1271 RTSHYEFYCSAPLMIIPC 1324
>LOC_Os04g32280:12004.t02907:unspliced-genomic hypothetical protein| Length = 588 Score = 33.6 bits (67), Expect = 2.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 / +2 Query: 426 PHQSRGIGSAHRERGRSEPPGSTGARH 346 PH G+GS ERG+ E G +G H Sbjct: 101 PHHHSGVGSKSEERGKVEGGGQSGGAH 181
>LOC_Os04g04574:12004.t00343:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3512 Score = 33.6 bits (67), Expect = 2.8 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 / +3 Query: 764 WGRISPRSRSSSQANPETRWTMRASRRACASSNEPKE 874 W RI+ RS S + +R T RR+C SS P+E Sbjct: 1563 WSRIT*RSWSCGRRTCSSRRTSTQWRRSCTSSRSPRE 1673
>LOC_Os11g18830:12011.t01653:unspliced-genomic survival motor neuron containing protein, expressed| Length = 6426 Score = 26.7 bits (52), Expect(2) = 3.5 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +3 / +2 Query: 801 KRIRRLDGR*GHLDVRVRHPMNPRRKAHVHLCEN*GGRP 917 +R+RR DGR G +D R+ V GG P Sbjct: 191 RRVRRADGRRGSVD*EAGEEGEEGRRGRVEEARRGGGDP 307 Score = 23.5 bits (45), Expect(2) = 3.5 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 / +2 Query: 765 GEGSHRGQGVRAKRIRRL 818 G G+ G+GVR R RRL Sbjct: 134 GAGAAMGRGVRRPRRRRL 187
>LOC_Os03g61400:12003.t05371:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5757 Score = 29.5 bits (58), Expect(2) = 3.8 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -3 / -2 Query: 827 SSIESPDSLGSNSLTSVR 774 SS+ PD+LGSN TS+R Sbjct: 3743 SSLRKPDALGSNDATSLR 3690 Score = 26.7 bits (52), Expect(2) = 3.8 Identities = 11/25 (44%), Positives = 12/25 (48%) Frame = -1 / -1 Query: 394 PGARPIGTPGLHRSAPRRSNLSPGA 320 P RP G P +PR N PGA Sbjct: 2550 PSGRPPGLPATPDGSPRE*NQPPGA 2476
>LOC_Os12g02660:12012.t00159:unspliced-genomic expressed protein| Length = 10550 Score = 33.1 bits (66), Expect = 3.9 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +3 / +3 Query: 660 GAGACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR 827 G GA + EQ E + +RRG C G G H G+ +++ R +GR Sbjct: 2325 GRGALSKLAEQSIEQETEQRRGKNKYLSCATVDSWGSGEHEGEADPSEK*GR*EGR 2492
>LOC_Os11g16400:12011.t01420:unspliced-genomic expressed protein| Length = 3801 Score = 33.1 bits (66), Expect = 3.9 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -1 / -3 Query: 1126 SELQHQPTRQERRNAYCIDSRRQSSTPHRRTR 1031 SEL+ P R RR+ D R S PHRR R Sbjct: 502 SELEPSPRRPRRRHHPAGDDHRPPSPPHRRLR 407
>LOC_Os08g01620:12008.t00061:unspliced-genomic shwachman-Bodian-Diamond syndrome protein, putative, expressed| Length = 3226 Score = 33.1 bits (66), Expect = 3.9 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +2 / +3 Query: 779 PRSRSSSQANPETRWTMRASRRACASSNEPKEEGSCT 889 P S SS +P + WT ++RR A + P SCT Sbjct: 402 PSSPPSSTRSPPSSWTRPSTRRHAAPTPSP*SSASCT 512
>LOC_Os06g45240:12006.t04211:unspliced-genomic ATP binding protein, putative, expressed| Length = 3541 Score = 33.1 bits (66), Expect = 3.9 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 / -1 Query: 849 HARRDALIVHRVSGFAWLELLDLGEILPQQIKPLHIA 739 H R A +V +G A+ ELLD GE +P+ +H+A Sbjct: 3493 HGRGGAAVVGAGAGVAFPELLDAGEGIPEVPSLVHVA 3383
>LOC_Os04g39070:12004.t03477:unspliced-genomic F-box domain containing protein| Length = 1833 Score = 33.1 bits (66), Expect = 3.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -1 / -3 Query: 400 STPGARPIGTPGLHRSAPRRSNLSPGA 320 S+P A P G G R+APRR SPGA Sbjct: 616 SSPCAGPRGPGGARRAAPRRRR*SPGA 536
>LOC_Os03g11980:12003.t00999:unspliced-genomic beta-hexosaminidase beta chain precursor, putative, expressed| Length = 2578 Score = 33.1 bits (66), Expect = 3.9 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = -1 / -3 Query: 844 TSRCPHRPSSLRIRLARTP*PR*DPSPANQATSHCLWGQLPRRRRS 707 T+ CP PS R P R SP + T W PRRRR+ Sbjct: 1610 TAACPRAPSPACRTGCRCPPTRRGRSPGSSTTPTTRWRGSPRRRRA 1473
>LOC_Os10g32070:12010.t02527:unspliced-genomic GATA zinc finger family protein| Length = 1747 Score = 27.2 bits (53), Expect(2) = 3.9 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = -3 / -3 Query: 1121 TTTPADPTGASKRVLYRLPQTKLHPTPKNSTDL 1023 T TPA S R R P + HPTP + L Sbjct: 1244 TATPAPLLPPSPRRRRRHPSPRRHPTPARKSQL 1146 Score = 23.1 bits (44), Expect(2) = 3.9 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -1 / -1 Query: 1000 ENPHPPSTTSTKQLWR 953 + P P TTS+ + WR Sbjct: 1105 KTPRPHDTTSSNKAWR 1058
>LOC_Os01g31020:12001.t02686:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12465 Score = 27.6 bits (54), Expect(2) = 4.5 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +3 / +2 Query: 663 AGACATTQEQPQEGQLRRRRGNCPQ 737 A A T +++P+EG+ R +RG P+ Sbjct: 6641 AAAIGTAEQRPREGKGRGKRGGGPR 6715 Score = 22.1 bits (42), Expect(2) = 4.5 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +3 / +2 Query: 711 RRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKR 806 RRRR P+R+ G R G RA+R Sbjct: 6731 RRRRKRRPERRKAERGSGRRGRRRSGGRRARR 6826
>LOC_Os03g20120:12003.t01773:unspliced-genomic galactinol synthase 3, putative, expressed| Length = 1720 Score = 28.6 bits (56), Expect(3) = 4.6 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 / +2 Query: 364 ARGFRSAALPVC*PNSPTLMRLSHCESYCAAP 459 AR RS + P C SP S C + CA+P Sbjct: 752 ARRRRSTSTPACSCTSPAWPPPSPCSTLCASP 847 Score = 22.6 bits (43), Expect(3) = 4.6 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +2 / +3 Query: 785 SRSSSQANPETRWTMRASR 841 SRS + WT RASR Sbjct: 1260 SRSGGTSTTTAAWTSRASR 1316 Score = 21.7 bits (41), Expect(3) = 4.6 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = +2 / +2 Query: 944 QYMPP*LLSRCSRGGVGVFCC 1006 QY+P L +C+ + CC Sbjct: 1538 QYVPSSTLHKCNEACLEYVCC 1600
>LOC_Os07g12340:12007.t01106:unspliced-genomic NAC domain-containing protein 67, putative, expressed| Length = 1313 Score = 32.2 bits (64), Expect(2) = 4.6 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +2 / +1 Query: 767 GRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGSCT 889 GR RSR SS A RWT R RR + P+ + T Sbjct: 640 GRRGRRSRRSSTATRSRRWTTRCRRRRSTTPCCPRRRRATT 762 Score = 21.7 bits (41), Expect(2) = 4.6 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3 / +2 Query: 696 QEGQLRRRRG 725 QEG+ RRRRG Sbjct: 488 QEGRRRRRRG 517
>LOC_Os04g20400:12004.t01778:unspliced-genomic glucosyltransferase-like protein, putative, expressed| Length = 1853 Score = 29.0 bits (57), Expect(2) = 4.7 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -2 / -1 Query: 426 PHQSRGIGSAHRERGRSEPPGSTGAR 349 P + RG+G+A G PPG G R Sbjct: 707 PCRRRGVGTAEASTGGQ*PPGGPGGR 630 Score = 25.4 bits (49), Expect(2) = 4.7 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 / -3 Query: 878 LPPWVHWMTHTHVEMPSSSIESP 810 +PP + W H E SS ESP Sbjct: 1530 IPPMLSWTNHRPPEFD*SSPESP 1462
>LOC_Os03g50730:12003.t04410:unspliced-genomic eukaryotic membrane protein family protein, expressed| Length = 5330 Score = 27.2 bits (53), Expect(2) = 4.8 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +3 / -2 Query: 657 RGAGACATTQEQPQEGQLRRRRGNCPQRQ 743 R AG P G LRRRRG P R+ Sbjct: 154 RRAGGWQIGVAYPAAGDLRRRRGRRPPRR 68 Score = 22.6 bits (43), Expect(2) = 4.8 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +2 / -1 Query: 797 SQANPETRWTMRASRRACASSNE 865 S ANP RWT R A + E Sbjct: 77 SPANPRRRWTSPPRRGEEAEAGE 9
>LOC_Os05g51510:12005.t04577:unspliced-genomic protein phosphatase 2C ABI2, putative, expressed| Length = 3591 Score = 26.7 bits (52), Expect(2) = 5.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 / +3 Query: 813 RLDGR*GHLDVRVRHPMNPRRKAHVHL 893 R +G GH + RVRH + A VHL Sbjct: 735 RAEGCGGHCEERVRHGLRSALGAGVHL 815 Score = 23.1 bits (44), Expect(2) = 5.0 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = +3 / +3 Query: 705 QLRRRRGNCPQRQC 746 +LRRRRG C C Sbjct: 708 RLRRRRGGCRAEGC 749
>LOC_Os06g10790:12006.t00956:unspliced-genomic protein kinase, putative, expressed| Length = 2368 Score = 26.7 bits (52), Expect(2) = 5.1 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -3 / -3 Query: 869 WVHWMTHTHVEMPSSSIESPDSLGSNSLTSVRSFPSKSS 753 W+H + SSS P SLGS + ++ PS SS Sbjct: 2024 WLHISPSHSTSLASSSS*HPSSLGSTARSTSPPPPSPSS 1908 Score = 23.1 bits (44), Expect(2) = 5.1 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -3 / -1 Query: 941 ETGTGNECWAPP 906 +TGT CWA P Sbjct: 2071 DTGTPASCWASP 2036
>LOC_Os10g18470:12010.t01395:unspliced-genomic hypothetical protein| Length = 555 Score = 32.7 bits (65), Expect = 5.4 Identities = 18/57 (31%), Positives = 24/57 (42%) Frame = +3 / -3 Query: 657 RGAGACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR 827 R G A + + + + R R CP+R C + GSHR G RA R R Sbjct: 433 RRTGT*ACHRRRARPARRRSPRRRCPRRSCARSCGRRTGSHRTGGARAAPTTRSSAR 263
>LOC_Os05g24490:12005.t02106:unspliced-genomic conserved hypothetical protein| Length = 673 Score = 32.7 bits (65), Expect = 5.4 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 / +1 Query: 654 GRGAGACATTQEQPQEGQLRRRRGNCPQRQCEVA*FAGEGS 776 G G C++ ++ G+ RRRR CP+R G GS Sbjct: 547 GGGGWRCSSGPQRRWAGRRRRRRCGCPRRDTRWGWIGGRGS 669
>LOC_Os05g20930:12005.t01854:unspliced-genomic transcriptional regulator RABBIT EARS, putative, expressed| Length = 1037 Score = 32.7 bits (65), Expect = 5.4 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = -3 / +2 Query: 941 ETGTGNECWAPPLIFTQMYMSLPPWVHWMTHTHVEMPSSSIESPDSLGSNSLTSVRSFPS 762 E GTG E P M PP + + H + P S NS+ V ++P+ Sbjct: 317 EDGTGGESHGMPPNQNYMIQPCPPQIGTLQHAYSPNPRSGSILAADTNPNSICDVVAYPA 496 Query: 761 KS 756 +S Sbjct: 497 RS 502
>LOC_Os03g22370:12003.t01988:unspliced-genomic ultraviolet-B-repressible protein, putative, expressed| Length = 757 Score = 32.7 bits (65), Expect = 5.4 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 / +1 Query: 654 GRGAGACATTQEQPQEGQLRRRRGNCPQRQ 743 G GAGA A QE P + ++RRRR +R+ Sbjct: 331 GGGAGAVAVAQELPAQHRVRRRRARRHRRR 420
>LOC_Os01g08780:12001.t00756:unspliced-genomic type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2, putative,| expressed Length = 4673 Score = 32.7 bits (65), Expect = 5.4 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +3 / +2 Query: 651 DGRGAGACATTQEQPQEGQLRRRR 722 DGRGAG A Q + Q GQ+ RRR Sbjct: 3332 DGRGAGVRADVQVRAQLGQVHRRR 3403
>LOC_Os12g30824:12012.t02788:unspliced-genomic ent-kaurene synthase B, chloroplast precursor, putative, expressed| Length = 18858 Score = 32.7 bits (65), Expect = 5.4 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +2 / -3 Query: 731 PPKAM*SGLICWGRISPRSRSSSQANPETRWTMRASRRACAS 856 PP+ SGL W + RS S +P T T + R C S Sbjct: 3061 PPRTSVSGLKLWCGLDRRSHSDRDLSPPTGSTSSSGHRMCLS 2936
>LOC_Os10g09430:12010.t00759:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4054 Score = 32.7 bits (65), Expect = 5.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 / +3 Query: 758 ICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKE 874 + W R + RS S + +R T RR+C SS PKE Sbjct: 2748 VAWSRTT*RSWSCVRRTCSSRRTSTRWRRSCISSRSPKE 2864
>LOC_Os06g42800:12006.t03971:unspliced-genomic ATP binding protein, putative, expressed| Length = 5709 Score = 32.7 bits (65), Expect = 5.4 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 / -1 Query: 411 GIGSAHRERGRSEPPGSTGARH 346 G+GS HR G E G +G RH Sbjct: 399 GVGSRHRREGEEENAGQSGGRH 334
>LOC_Os05g16960:12005.t01465:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 7718 Score = 32.7 bits (65), Expect = 5.4 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 / +2 Query: 764 WGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGS 883 W R + RSRS + +R T RR+C SS P+E + Sbjct: 2603 WSRTT*RSRSCVRRTCSSRRT*TRWRRSCISSRSPRERSA 2722
>LOC_Os04g10100:12004.t00843:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6726 Score = 32.7 bits (65), Expect = 5.4 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +2 / +3 Query: 758 ICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGSCTFV 895 + W R + RS S + +R T RR+C SS P+E + V Sbjct: 1629 VAWWRTT*RSWSCGRRTCSSRRTSTQWRRSCTSSRSPRERSAAPSV 1766
>LOC_Os02g32320:12002.t02875:unspliced-genomic hypothetical protein| Length = 612 Score = 32.7 bits (65), Expect = 5.4 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -1 / -3 Query: 742 CLWGQLPRRRRSWPS 698 C W + PRRRR+WPS Sbjct: 151 CTWPRPPRRRRAWPS 107
>LOC_Os01g67670:12001.t06124:unspliced-genomic DELLA protein GAI, putative| Length = 1093 Score = 32.7 bits (65), Expect = 5.4 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 / -3 Query: 784 PR*DPSPANQATSHCLWGQLPRRRR 710 PR PSP + A HC W + RRRR Sbjct: 635 PRGSPSPRSGAPGHC*WRRPRRRRR 561
>LOC_Os01g67650:12001.t06122:unspliced-genomic DELLA protein DWARF8, putative| Length = 1599 Score = 32.7 bits (65), Expect = 5.4 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 / -3 Query: 784 PR*DPSPANQATSHCLWGQLPRRRR 710 PR PSP + A HC W + RRRR Sbjct: 1141 PRGSPSPRSGAPGHC*WRRPRRRRR 1067
>LOC_Os01g61480:12001.t05527:unspliced-genomic transcription factor LAX PANICLE, putative, expressed| Length = 1078 Score = 32.7 bits (65), Expect = 5.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 / +3 Query: 761 CWGRISPRSRSSSQANPETRWTMRASRRACASSNEPK 871 CW R S S SS + +P TR ++RRA ++ P+ Sbjct: 348 CWSRPSTTSSSSRRRSPCTRPRSCSTRRAASTPTSPR 458
>LOC_Os02g14770:12002.t01271:unspliced-genomic phosphoenolpyruvate carboxylase 1, putative, expressed| Length = 11795 Score = 25.8 bits (50), Expect(2) = 6.0 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +3 / +1 Query: 657 RGAGACATTQEQPQEGQLRRRRGNCPQRQ 743 R + +CA G++RR RG+C + + Sbjct: 124 RASPSCAGGSPPAASGRIRRSRGSCKRER 210 Score = 23.5 bits (45), Expect(2) = 6.0 Identities = 9/26 (34%), Positives = 12/26 (46%) Frame = +2 / +1 Query: 779 PRSRSSSQANPETRWTMRASRRACAS 856 PR+ SSS P + S R C + Sbjct: 301 PRTTSSSSTTPSSSTASSTSSRTCTA 378
>LOC_Os01g50940:12001.t04528:unspliced-genomic DNA binding protein, putative, expressed| Length = 2113 Score = 26.3 bits (51), Expect(3) = 6.4 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +3 / +2 Query: 786 QGVRAKRIRRLDGR*GHLDVRVRHPMNPRRKAHVHLC 896 +GV +R+ + GR R HP +PR A +C Sbjct: 875 RGVTHRRLPPVQGRRSRARFRRSHPRDPRGLARHPIC 985 Score = 24.4 bits (47), Expect(3) = 6.4 Identities = 6/10 (60%), Positives = 7/10 (70%) Frame = +3 / +1 Query: 1092 RSCRVGWCCS 1121 R CR WCC+ Sbjct: 1480 RQCRTRWCCA 1509 Score = 22.1 bits (42), Expect(3) = 6.4 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +3 / +1 Query: 663 AGACATTQEQPQEGQLRRRRG 725 AGA AT P G+ RRG Sbjct: 544 AGATATAATVPDTGRSAPRRG 606
>LOC_Os01g21380:12001.t01875:unspliced-genomic sarcosine oxidase, putative, expressed| Length = 1375 Score = 30.9 bits (61), Expect(2) = 6.4 Identities = 18/41 (43%), Positives = 20/41 (48%) Frame = +3 / +3 Query: 711 RRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKRIRRLDGR*G 833 RRRR Q V +G R QG R R RR +GR*G Sbjct: 465 RRRRAERDQGGGHVPGARRQGGRRRQGQRGGRRRRQEGR*G 587 Score = 22.6 bits (43), Expect(2) = 6.4 Identities = 8/17 (47%), Positives = 9/17 (52%) Frame = +2 / +3 Query: 365 PGGSDRPRSRCADPIPR 415 PGG RPR +PR Sbjct: 378 PGGRGRPRREVGRRVPR 428
>LOC_Os12g06260:12012.t00512:unspliced-genomic VAMP protein SEC22, putative, expressed| Length = 1386 Score = 32.2 bits (64), Expect = 7.4 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 / +1 Query: 777 HRGQGVRAKRIRRLDGR*GHLDVRVRHPMNPRRKAHVH 890 H G+G+R R RRL + R R P +PRR H Sbjct: 202 HHGEGLRQARRRRLPAGMPAIHHRPRRPRHPRRHHRPH 315
>LOC_Os07g10240:12007.t00898:unspliced-genomic anthocyanidin 3-O-glucosyltransferase, putative| Length = 1500 Score = 32.2 bits (64), Expect = 7.4 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +3 / +3 Query: 702 GQLRRRRGNCPQRQCEVA*FAGEGSHRGQGVRAKR 806 G+ RRRR P+R AG+G G+GVRA+R Sbjct: 1299 GEGRRRRRLVPRRGRRGGGAAGDGGGGGEGVRAQR 1403
>LOC_Os07g05060:12007.t00391:unspliced-genomic expressed protein| Length = 2457 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/38 (36%), Positives = 15/38 (39%) Frame = +3 / -3 Query: 258 CPCCSGPKAAAWXXXXXXXXSAPGLRFDRRGALLWSPG 371 CPCC G + A A G R RG W PG Sbjct: 592 CPCCGGTEKGAATGADGRRERAVGCRGRARGR*SWRPG 479
>LOC_Os04g05880:12004.t00469:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 13129 Score = 32.2 bits (64), Expect = 7.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 / +1 Query: 881 SLPPWVHWMTHTHVEMPSSSIESPDSLGSNSLTS 780 +LP W THT+ ++P SI + SN+ TS Sbjct: 2200 ALPSWTQT*THTNFQIPLGSIHEDIRIKSNNTTS 2301
>LOC_Os03g23760:12003.t02071:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 8877 Score = 28.1 bits (55), Expect(2) = 7.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 / +2 Query: 755 LICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKE 874 ++ W R + R S + +R T R+C SS+ PKE Sbjct: 1628 IVAWWRTT*RFWSCVRRTCSSRRTSTRWSRSCTSSSSPKE 1747 Score = 27.6 bits (54), Expect(2) = 7.4 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +1 / +2 Query: 1030 VEFFGVGWSFVCGSRYSTR 1086 V F GW F CG Y+TR Sbjct: 6995 VHLFNRGWLFRCGWAYATR 7051
>LOC_Os10g20020:12010.t01499:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6725 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 / +3 Query: 758 ICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGS 883 + W R + RS S + +R T RR+C SS P+E + Sbjct: 1629 VAWWRTT*RSWSCGRRTCSSRRTSTRWRRSCTSSRSPRERSA 1754
>LOC_Os09g23920:12009.t02075:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6003 Score = 32.2 bits (64), Expect = 7.4 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 / +3 Query: 755 LICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGSCTFV 895 ++ W R + RS S + +R T RR+C SS P+E + V Sbjct: 903 VVAWWRTT*RSWSCVRRTCSSRRTSTQWRRSCTSSRSPRERSAAPSV 1043
>LOC_Os09g13710:12009.t01160:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5559 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 / +2 Query: 755 LICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKE 874 ++ W R + RS S ++ +R T RR+C SS P+E Sbjct: 461 VVAWWRTT*RSWSCAKRTCSSRRTSTRWRRSCISSRSPRE 580
>LOC_Os08g29669:12008.t004314:unspliced-genomic cytochrome b5, putative, expressed| Length = 3371 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 / -3 Query: 1161 TLQKKQYPQVSTLNYNTSRPDRSVETRTVSTPADKAPP 1048 T ++ P S + T+ P S + T STPA +APP Sbjct: 3273 TATRRDAPPPSRSSAPTTTPPSSTSSTTASTPAARAPP 3160
>LOC_Os08g29660:12008.t02720:unspliced-genomic OsWRKY69 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 2368 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 / +3 Query: 1161 TLQKKQYPQVSTLNYNTSRPDRSVETRTVSTPADKAPP 1048 T ++ P S + T+ P S + T STPA +APP Sbjct: 702 TATRRDAPPPSRSSAPTTTPPSSTSSTTASTPAARAPP 815
>LOC_Os06g38010:12006.t03496:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6726 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 / +3 Query: 755 LICWGRISPRSRSSSQANPETRWTMRASRRACASSNEPKE 874 ++ W R + RS S ++ +R T RR+C SS P+E Sbjct: 1626 VVAWWRTT*RSWSCARRTCSSRRTSTRWRRSCISSRSPRE 1745
>LOC_Os06g30450:12006.t02748:unspliced-genomic hypothetical protein| Length = 600 Score = 32.2 bits (64), Expect = 7.4 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 / -2 Query: 905 RGAPSIRCLYRFHQYMPP*LLSRCSRGGVGVFC 1003 R + S C++R H+ +PP*LLS + V V C Sbjct: 452 RHSSSTACMHRCHRPLPP*LLSTFAATAVVVHC 354
>LOC_Os05g49060:12005.t04339:unspliced-genomic expressed protein| Length = 2788 Score = 32.2 bits (64), Expect = 7.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 / -3 Query: 770 RISPRSRSSSQANPETRWTMRASRRAC 850 R SPRSR + + E RW + S+R C Sbjct: 182 RCSPRSRPARRCRREGRWRLEKSQRPC 102
>LOC_Os02g38620:12002.t03500:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3412 Score = 32.2 bits (64), Expect = 7.4 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 / +1 Query: 764 WGRISPRSRSSSQANPETRWTMRASRRACASSNEPKEEGSCTFV 895 W R + RS S ++ +R T RR+C SS P+E + V Sbjct: 1639 WSRTT*RSWSCARRTCSSRRTSTQWRRSCISSRSPRERSAAPSV 1770
>LOC_Os01g70900:12001.t06388:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3174 Score = 28.1 bits (55), Expect(2) = 7.4 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +3 / +2 Query: 684 QEQPQEGQLRRRRGNCPQRQ 743 QE+ +E RRRG+CP+R+ Sbjct: 1271 QEEEEEVSPYRRRGSCPRRR 1330 Score = 26.3 bits (51), Expect(2) = 7.4 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = +3 / +1 Query: 861 MNPRRKAHVHLCEN*GGRPAFVACTGFISTCRHSCLVD 974 M PR+ +L G P FV C+G ++ + ++D Sbjct: 2872 MAPRKAPSPYLQAKQIGSPRFVRCSGNVAVLKRPPIID 2985
>LOC_Os09g25000:12009.t02181:unspliced-genomic spotted leaf protein 11, putative, expressed| Length = 1657 Score = 29.9 bits (59), Expect(2) = 7.6 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 / +3 Query: 409 NWVSTPGARPIGTPGLHRSAPRRSNLSPGA 320 +W S GA P P + PRRS+ SP + Sbjct: 1236 SWSSPTGATPTAPPWRRPAPPRRSSSSPSS 1325 Score = 23.5 bits (45), Expect(2) = 7.6 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 / +3 Query: 1108 PTRQERRNAYCIDSRRQSSTPHRRTRP 1028 P+R+ R C R+ S+P TRP Sbjct: 996 PSRRRTRRTCCPRGWRRRSSPPWATRP 1076
>LOC_Os01g67480:12001.t06105:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 5331 Score = 26.3 bits (51), Expect(2) = 8.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 / +2 Query: 687 EQPQEGQLRRRRGNCPQRQ 743 EQ QEG RRRR P+R+ Sbjct: 3947 EQQQEGPRRRRRRRRPRRR 4003 Score = 22.6 bits (43), Expect(2) = 8.7 Identities = 10/30 (33%), Positives = 12/30 (40%) Frame = +2 / +3 Query: 791 SSSQANPETRWTMRASRRACASSNEPKEEG 880 SS RW A +C+SS P G Sbjct: 4116 SSLACRSSRRWRWPAWMTSCSSSQTPSPAG 4205
>LOC_Os05g34950:12005.t03088:unspliced-genomic protein kinase, putative, expressed| Length = 2711 Score = 28.6 bits (56), Expect(2) = 8.7 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +3 / -3 Query: 318 SAPGLRFDRRGALLWSPGVPIGRAP 392 S P R RR A WSP P GR+P Sbjct: 1527 SPPPARACRRRAGCWSP*CPCGRSP 1453 Score = 25.4 bits (49), Expect(2) = 8.7 Identities = 11/31 (35%), Positives = 13/31 (41%) Frame = +2 / -3 Query: 776 SPRSRSSSQANPETRWTMRASRRACASSNEP 868 SPR R+ +A R R RR C P Sbjct: 1158 SPRPRTRPRARRSRRRRTRRGRRGCGRRRRP 1066 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 342,666,914 Number of extensions: 5116552 Number of successful extensions: 36785 Number of sequences better than 10.0: 75 Length of query: 401 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 351 Effective length of database: 52,799,986 Effective search space: 18532795086 Effective search space used: 18532795086 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
