ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111j11 |
|---|---|
| Clone Library Name | barley_pub |
>Q8C0S4:TT21A_MOUSE Tetratricopeptide repeat protein 21A - Mus musculus (Mouse)| Length = 1314 Score = 39.3 bits (90), Expect = 0.032 Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 12/231 (5%) Frame = +1 Query: 283 RVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLLI----DLYKKCGKVD 450 R+ A D+A+ D A + I + C +A+E + ++ + D+ G Sbjct: 654 RITVANVDLALSKGNVDLALNMLRGITP-KQPCYTEAKEKMASIYLHTRKDVRLYIGCYV 712 Query: 451 EQIELLKQKLKMICLGEAFNG--KITKTARSHGKKFQVSIQQEMSRILGNLGWAYMQQNN 624 E E L + LG+AF + K + + ++ + + ++ +G AY++ + Sbjct: 713 ELCEHLPGPHSSLLLGDAFMNIQEPEKALEVYDEAYRKNPHD--ASLVSRIGQAYVKTHQ 770 Query: 625 YEAAELVYRKAQTIVPDANRACNLGLCLIKQGRDEEAVQVLEDVLLRRISGLDGDKAVAR 804 Y A Y AQ I C L L+K + +A +VL+ L R SG+ ++ Sbjct: 771 YAKAINYYEAAQKISGQDFLCCELAELLLKLKKYHKAEKVLKQA-LERDSGVKDIPSMIN 829 Query: 805 AEQLLRELGPI------THVSSPFDVGLSFTEEIMERLDLVMNEWTPFRSR 939 + L L + V ++ L I++R+ L +E PF+++ Sbjct: 830 EVKCLLLLAKVYKSHKKEEVMETLNLALDLQSRILKRVPLEQSEMIPFQNQ 880
>Q3UV71:TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 - Mus musculus| (Mouse) Length = 942 Score = 38.9 bits (89), Expect = 0.042 Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 13/196 (6%) Frame = +1 Query: 211 HLQLVEKDAEASIVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIR--------- 363 +L + KD + +++ KA+ + + AL ++ ++K Q++ EEAI ++ Sbjct: 582 NLGTLTKDMAEAKMYYQKALQLHPQHNRALFNLGNLLKSQEKTEEAIMLLKESIKYGPDF 641 Query: 364 --SFRHLCSRQAQESLDNLLIDLYKKCGKVDEQIELLKQKLKMICLGEAFNGKITKTARS 537 ++ L S A++ D+Y+ K L + + F K A + Sbjct: 642 ADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPEK----AVA 697 Query: 538 HGKKFQVSIQQEMSRILG--NLGWAYMQQNNYEAAELVYRKAQTIVPDANRACNLGLCLI 711 H +Q +IQ S + NLG Y AE YR+A + A LG Sbjct: 698 H---YQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAEVLSPLGALYY 754 Query: 712 KQGRDEEAVQVLEDVL 759 GR +EA++V + + Sbjct: 755 NTGRHKEALEVYREAV 770
>Q61371:IFT88_MOUSE Intraflagellar transport 88 homolog - Mus musculus (Mouse)| Length = 824 Score = 38.1 bits (87), Expect = 0.072 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 10/80 (12%) Frame = +1 Query: 550 FQVSIQQEM----SRILGNLGWAYMQQNNYEAAELVYRKAQTIVPDANRAC------NLG 699 +QV ++ +M R+ N+G Y++Q NY A YR A +P ++ N+G Sbjct: 219 YQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIG 278 Query: 700 LCLIKQGRDEEAVQVLEDVL 759 + IK G+ +A+ E ++ Sbjct: 279 ITFIKTGQYSDAINSFEHIM 298
>P33292:PEX5_PICPA Peroxisomal targeting signal receptor - Pichia pastoris (Yeast)| Length = 576 Score = 37.0 bits (84), Expect = 0.16 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%) Frame = +1 Query: 550 FQVSIQQEMSRILG--NLGWAYMQQNNYEAAELVYRKAQTIVPDANRA-CNLGLCLIKQG 720 F+ +I+ E + L LG A N E A Y +A + P+ RA NLG+ I G Sbjct: 445 FKAAIEVEPDKALNWNRLGAALANYNKPEEAVEAYSRALQLNPNFVRARYNLGVSFINMG 504 Query: 721 RDEEAVQ-VLEDVLLRRISGLDGDK 792 R +EAV+ +L + L + G+D + Sbjct: 505 RYKEAVEHLLTGISLHEVEGVDASE 529
>Q13099:IFT88_HUMAN Intraflagellar transport 88 homolog - Homo sapiens (Human)| Length = 824 Score = 37.0 bits (84), Expect = 0.16 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Frame = +1 Query: 550 FQVSIQQEMSRILG----NLGWAYMQQNNYEAAELVYRKAQTIVPDANRAC------NLG 699 +QV ++ +M G N+G Y++Q NY A YR A VP N+ N+G Sbjct: 220 YQVIVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIG 279 Query: 700 LCLIKQGRDEEAVQVLEDVL 759 + I+ G+ +A+ E ++ Sbjct: 280 VTFIQAGQYSDAINSYEHIM 299
>Q6YZI0:SPY_ORYSJ Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Oryza sativa subsp. japonica (Rice) Length = 927 Score = 35.8 bits (81), Expect = 0.36 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Frame = +1 Query: 238 EASIVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLL 417 E +IV++ A++ R A ++ V+ K +D ++A+E + + +Q SL+NL Sbjct: 303 EMAIVFYELALHFNPRCAEACNNLGVIYKDRDNLDKAVECYQMALSIKPNFSQ-SLNNLG 361 Query: 418 IDLYKKCGKVDEQIELLKQKL-KMICLGEAFNGKITKTARSHGKKFQVSIQQEMSRILGN 594 + +Y GK+D ++++ + EA+N N Sbjct: 362 V-VYTVQGKMDAASSMIQKAIFANSTYAEAYN---------------------------N 393 Query: 595 LGWAYMQQNNYEAAELVYRKAQTIVPDANRACN---LGLCLIKQGRDEEAVQ 741 LG Y + +A Y K I PD+ A L L I +G D++ Q Sbjct: 394 LGVLYRDAGSITSAVQAYEKCLQIDPDSRNAGQNRLLALNYIDEGFDDKLYQ 445
>Q01495:PEX5_PICAN Peroxisomal targeting signal receptor - Pichia angusta (Yeast)| (Hansenula polymorpha) Length = 569 Score = 35.8 bits (81), Expect = 0.36 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 4/92 (4%) Frame = +1 Query: 550 FQVSIQQEMSRILG--NLGWAYMQQNNYEAAELVYRKAQTIVPDANRA-CNLGLCLIKQG 720 FQ +I+ + L LG + N E A Y + + P+ RA NLG+ I G Sbjct: 439 FQAAIEHNPNDALAWNRLGASLANSNKPEQAIEAYSRTLQLNPNFVRARYNLGVSFINMG 498 Query: 721 RDEEAVQ-VLEDVLLRRISGLDGDKAVARAEQ 813 +AV +L + + + LDG +VAR+ Q Sbjct: 499 MYRDAVDHLLTGLSMHEVESLDGSSSVARSNQ 530
>P42810:Y4667_PSEAE TPR repeat-containing protein PA4667 - Pseudomonas aeruginosa| Length = 590 Score = 33.9 bits (76), Expect = 1.4 Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = +1 Query: 583 ILGNLGWAYMQQNNYEAAELVYRKAQTIVPDANRACNLGLCLIKQGRDEEA--------- 735 IL ++GW +Q AE R+A PD A +LG L QGR +A Sbjct: 510 ILDSMGWINYRQGKLADAERYLRQALQRYPDHEVAAHLGEVLWAQGRQGDARAIWREYLD 569 Query: 736 VQVLEDVLLRRISGLDG 786 Q DVL R I L G Sbjct: 570 KQPDSDVLRRTIKRLTG 586
>Q8LP10:SPY_EUSGR Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Eustoma grandiflorum (Bluebells) (Lisianthus russellianus) Length = 918 Score = 33.9 bits (76), Expect = 1.4 Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +1 Query: 592 NLGWAYMQQNNYEAAELVYRKAQTIVPDANRAC-NLGLCLIKQGRDEEAVQVLEDVLL 762 NLG Y ++N + A Y+KA +I P+ +++ NLG+ QG+ + A ++E ++ Sbjct: 311 NLGVIYKDRDNLDKAVECYQKALSIKPNFSQSLNNLGVVFTVQGKMDAAASMIEKAIV 368
>Q751Y8:LCD1_ASHGO DNA damage checkpoint protein LCD1 - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 694 Score = 33.9 bits (76), Expect = 1.4 Identities = 19/67 (28%), Positives = 33/67 (49%) Frame = +1 Query: 388 QAQESLDNLLIDLYKKCGKVDEQIELLKQKLKMICLGEAFNGKITKTARSHGKKFQVSIQ 567 Q ++ N+L L + GK ELL Q K +C + + TA SH ++++ Sbjct: 500 QLHKATVNILQQLLLRYGKQLAHAELLHQTAKFLCREQELLLVVRLTADSHNSDMRITLA 559 Query: 568 QEMSRIL 588 +E+ R+L Sbjct: 560 EELIRLL 566
>P19737:YREC_SYNP2 TPR repeat-containing protein in recA 3'region - Synechococcus sp.| (strain PCC 7002) (Agmenellum quadruplicatum) Length = 256 Score = 33.5 bits (75), Expect = 1.8 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 556 VSIQQEMSRILGNLGWAYMQQNNYEAAELVYRKAQTIVPDANRACN-LGLCLIKQGRDEE 732 ++++ +RI G LG+A Q NY A YR+A + D N LG L + G + Sbjct: 70 LTLEANNARIHGALGYALSQLGNYSEAVTAYRRATELEDDNAEFFNALGFNLAQSGDNRS 129 Query: 733 AVQVLE 750 A+ + Sbjct: 130 AINAYQ 135
>Q09706:YA2G_SCHPO Uncharacterized protein C2F7.16c - Schizosaccharomyces pombe (Fission| yeast) Length = 1369 Score = 33.1 bits (74), Expect = 2.3 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 11/127 (8%) Frame = +1 Query: 580 RILGNLGWAYMQQNNYEAAELVYRKAQTIVPDANRACNLGLCLIKQ-----GRDEEAVQV 744 R G GWA++ +N+ E++Y A+ ++ D +R +G I + RD E V Sbjct: 922 RFYGLRGWAHLGENHELVTEMIYVHAKILIAD-DRVAVIGSANINERSLLGNRDSEIAAV 980 Query: 745 LEDVLLRRISGLDGDK-AVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLD-----L 906 + D L S +DG V + LR+ H+ DV L E M+ LD Sbjct: 981 IRDTLTID-SKMDGKPYKVGKFAHTLRKRLMREHLGLETDV-LEQREYNMDGLDRDTEWK 1038 Query: 907 VMNEWTP 927 + WTP Sbjct: 1039 RVEVWTP 1045
>Q5LWE5:GLND_SILPO [Protein-PII] uridylyltransferase - Silicibacter pomeroyi| Length = 908 Score = 33.1 bits (74), Expect = 2.3 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 24/168 (14%) Frame = +1 Query: 334 RAEEAIEAIRSFRHLCSRQAQESLD-NLLIDLYKKCGKVDEQ----IELLKQKL--KMIC 492 +AEE + A+R+ HL + +A E L +L +++ + G D +E+ QK + Sbjct: 269 QAEEFLWAVRAHLHLVTGRATEQLTFDLQVEVAARMGYQDRAGRRGVEVFMQKYFREATR 328 Query: 493 LGEAFNGKITKTARSHGK---------KFQVSIQQEMSRILGNL------GWAYMQQNNY 627 +GE +TK +H K + + I+Q + G L + + N Sbjct: 329 VGELTRIFLTKLEAAHMKGAPLLERIFRRRRRIKQGYKVVRGRLDVVDPEAFLADKLNLL 388 Query: 628 EAAELVYRKAQTIVPDANRACNLGLCLIKQG--RDEEAVQVLEDVLLR 765 E R I PDA R L LI G D+EA ++ D+LL+ Sbjct: 389 RIFEEALRTGMLIHPDAMRLVTANLDLIDDGMRNDKEARRIFLDLLLK 436
>Q96301:SPY_ARATH Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Arabidopsis thaliana (Mouse-ear cress) Length = 914 Score = 32.7 bits (73), Expect = 3.0 Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 4/176 (2%) Frame = +1 Query: 238 EASIVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLL 417 + +IV++ A + A ++ V+ K +D ++A+E + + AQ SL+NL Sbjct: 312 DMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPNFAQ-SLNNLG 370 Query: 418 IDLYKKCGKVDEQIELLKQK-LKMICLGEAFNGKITKTARSHGKKFQVSIQQEMSRILGN 594 + +Y GK+D ++++ L EAFN N Sbjct: 371 V-VYTVQGKMDAAASMIEKAILANPTYAEAFN---------------------------N 402 Query: 595 LGWAYMQQNNYEAAELVYRKAQTIVPDANRACN---LGLCLIKQGRDEEAVQVLED 753 LG Y N A Y + I PD+ A L + I +G D++ + D Sbjct: 403 LGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRLLAMNYINEGLDDKLFEAHRD 458
>Q8NDW8:TT21A_HUMAN Tetratricopeptide repeat protein 21A - Homo sapiens (Human)| Length = 1320 Score = 32.3 bits (72), Expect = 4.0 Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 8/135 (5%) Frame = +1 Query: 379 CSRQAQESLDNLLID------LYKKCGKVDEQIELLKQKLKMICLGEAFNGKIT--KTAR 534 C +A+E + N+ + LY +C + E E L + LG+A + K Sbjct: 692 CYMEAREKMANIYLQTLRDRRLYIRCYR--ELCEHLPGPHTSLLLGDALMSILEPEKALE 749 Query: 535 SHGKKFQVSIQQEMSRILGNLGWAYMQQNNYEAAELVYRKAQTIVPDANRACNLGLCLIK 714 + + ++ + + + +G AY++ + Y A Y AQ I C+LG L+K Sbjct: 750 VYDEAYRQNPHD--ASLASRIGHAYVKAHQYTEAIEYYEAAQKINGQDFLCCDLGKLLLK 807 Query: 715 QGRDEEAVQVLEDVL 759 + +A +VL+ L Sbjct: 808 LKKVNKAEKVLKQAL 822
>Q8NKW8:GYRA_STAAW DNA gyrase subunit A - Staphylococcus aureus (strain MW2)| Length = 887 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>P20831:GYRA_STAAU DNA gyrase subunit A - Staphylococcus aureus| Length = 889 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q6GD84:GYRA_STAAS DNA gyrase subunit A - Staphylococcus aureus (strain MSSA476)| Length = 887 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q6GKT9:GYRA_STAAR DNA gyrase subunit A - Staphylococcus aureus (strain MRSA252)| Length = 886 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q99XG5:GYRA_STAAN DNA gyrase subunit A - Staphylococcus aureus (strain N315)| Length = 889 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q932M0:GYRA_STAAM DNA gyrase subunit A - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 889 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELETILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q5HJZ0:GYRA_STAAC DNA gyrase subunit A - Staphylococcus aureus (strain COL)| Length = 887 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q2G2Q0:GYRA_STAA8 DNA gyrase subunit A - Staphylococcus aureus (strain NCTC 8325)| Length = 887 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>Q2FKQ0:GYRA_STAA3 DNA gyrase subunit A - Staphylococcus aureus (strain USA300)| Length = 887 Score = 32.3 bits (72), Expect = 4.0 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 727 EEAVQVLEDVLLRRISGLDGDKAVARAEQLLRELGPITHVSSPFDVGLSFTEEIMERLDL 906 E+ Q + D+ LRR++GL+ DK A +LL + + + + EE++ L L Sbjct: 419 EKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISELEAILA--------DEEVL--LQL 468 Query: 907 VMNEWTPFRSR 939 V +E T R R Sbjct: 469 VRDELTEIRDR 479
>O67066:FTSY_AQUAE Cell division protein ftsY homolog - Aquifex aeolicus| Length = 461 Score = 32.3 bits (72), Expect = 4.0 Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 1/143 (0%) Frame = +1 Query: 247 IVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLLIDL 426 +V+FW+ + + + K+ + + +Q + E+A + ++ + +E L LL +L Sbjct: 1 MVFFWRKSDVEKKAEKGDKNAILELIKQGKKEKAEKILKKYA-----SQREDLAELLFEL 55 Query: 427 YKKCGKVDEQIELLKQKLKMICLGEA-FNGKITKTARSHGKKFQVSIQQEMSRILGNLGW 603 Y + GK+ + LLK+ I G+A K+ + + K + ++ L N+ Sbjct: 56 YVQEGKLVQAYPLLKKYGDKI--GKAKERAKVYQAVGEYQKAIEEFLKVGDFESLYNVAK 113 Query: 604 AYMQQNNYEAAELVYRKAQTIVP 672 Y Q + A ++A+ +VP Sbjct: 114 IYHQLEKPDKALEYAQRAEKLVP 136
>Q9D903:EBP2_MOUSE Probable rRNA-processing protein EBP2 - Mus musculus (Mouse)| Length = 306 Score = 32.3 bits (72), Expect = 4.0 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 421 DLYKKCGKVDEQIELLKQKL--KMICLGEAFNGKITKTARSHGKKFQVSIQQEMSR 582 D + + K D+Q++ ++QKL K + ++ K + R +GKK Q + Q+ R Sbjct: 135 DYFAEMAKSDQQMQKIRQKLQTKQAAMEKSEKAKQLRALRKYGKKVQTEVLQKRQR 190
>Q16787:LAMA3_HUMAN Laminin subunit alpha-3 precursor - Homo sapiens (Human)| Length = 1713 Score = 32.0 bits (71), Expect = 5.2 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 26/170 (15%) Frame = +1 Query: 397 ESLDNLLIDLYKKCGKVDEQIELLKQKLKMICLGEAFNGKI------TKTARSHGKKFQV 558 + D+ ++ L + EQ+ L+K +L+ + ++ K R+ ++ Sbjct: 200 DDCDSCVMTLLNDLATMGEQLRLVKSQLQGLSASAGLLEQMRHMETQAKDLRNQLLNYRS 259 Query: 559 SIQQEMSRILG--------NLGWAYMQQNNYEAAELVYRKAQTIVPDANRACNLGLCLIK 714 +I S+I G N + +Q E A++ RKAQT+ + NRA L Sbjct: 260 AISNHGSKIEGLERELTDLNQEFETLQ----EKAQVNSRKAQTLNNNVNRATQSAKEL-- 313 Query: 715 QGRDEEAVQVLEDV--LLRRISGLDGD----------KAVARAEQLLREL 828 D + V+ +V LL++ISG DG+ + A A++++REL Sbjct: 314 ---DVKIKNVIRNVHILLKQISGTDGEGNNVPSGDFSREWAEAQRMMREL 360
>P64796:Y1309_MYCBO Uncharacterized protein Mb1309 - Mycobacterium bovis| Length = 875 Score = 31.6 bits (70), Expect = 6.8 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 376 LCSRQAQESLDNLLIDLYKKCGKVDEQIELLKQKLKMICLGE 501 LC R+ D L L CG DEQ++ L+ +L+ +C G+ Sbjct: 503 LCRRELLSRRDQLTATLAGLCG--DEQVDQLRSRLEQLCAGQ 542
>P64795:Y1278_MYCTU Uncharacterized protein Rv1278/MT1315 - Mycobacterium tuberculosis| Length = 875 Score = 31.6 bits (70), Expect = 6.8 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 376 LCSRQAQESLDNLLIDLYKKCGKVDEQIELLKQKLKMICLGE 501 LC R+ D L L CG DEQ++ L+ +L+ +C G+ Sbjct: 503 LCRRELLSRRDQLTATLAGLCG--DEQVDQLRSRLEQLCAGQ 542
>Q8RVB2:SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Solanum lycopersicum (Tomato) (Lycopersicon esculentum) Length = 931 Score = 31.2 bits (69), Expect = 8.8 Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 4/176 (2%) Frame = +1 Query: 238 EASIVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLL 417 + +IV++ A + A ++ V+ K +D ++A+E + + +Q SL+NL Sbjct: 317 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALSIKPNFSQ-SLNNLG 375 Query: 418 IDLYKKCGKVDEQIELLKQKL-KMICLGEAFNGKITKTARSHGKKFQVSIQQEMSRILGN 594 + +Y GK+D ++++ + EA+N N Sbjct: 376 V-VYTVQGKMDAAASMIEKAIIANPTYAEAYN---------------------------N 407 Query: 595 LGWAYMQQNNYEAAELVYRKAQTIVPDANRACN---LGLCLIKQGRDEEAVQVLED 753 LG Y N A Y + I PD+ A L + I +G D++ + D Sbjct: 408 LGVLYRDAGNISLAIEAYEQCLKIDPDSRNAGQNRLLAMNYINEGTDDKLYEAHRD 463
>O82039:SPY_PETHY Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY - Petunia hybrida (Petunia) Length = 932 Score = 31.2 bits (69), Expect = 8.8 Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 4/176 (2%) Frame = +1 Query: 238 EASIVWFWKAINSGDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLL 417 + +IV++ A + A ++ V+ K +D ++A+E + + +Q SL+NL Sbjct: 317 DMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQMALTIKPNFSQ-SLNNLG 375 Query: 418 IDLYKKCGKVDEQIELLKQKL-KMICLGEAFNGKITKTARSHGKKFQVSIQQEMSRILGN 594 + +Y GK+D ++++ + EA+N N Sbjct: 376 V-VYTVQGKMDAAASMIEKAIIANPTYAEAYN---------------------------N 407 Query: 595 LGWAYMQQNNYEAAELVYRKAQTIVPDANRACN---LGLCLIKQGRDEEAVQVLED 753 LG Y N A Y + I PD+ A L + I +G D++ + D Sbjct: 408 LGVLYRDAGNISLAIEAYEQCLKIDPDSRNAGQNRLLAMNYINEGSDDKLYEAHRD 463
>Q96PZ0:PUS7_HUMAN Pseudouridylate synthase 7 homolog - Homo sapiens (Human)| Length = 661 Score = 31.2 bits (69), Expect = 8.8 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Frame = +1 Query: 292 SALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLLIDLYKKCGKVDEQIELLK 471 S L D+++ + ++D +E+ + + + ++ L+ L + K+ E IE K Sbjct: 149 SHLNDLSIPVDEEDPSEDIFTVLTA-------EEKQRLEELQLFKNKETSVAIEVIEDTK 201 Query: 472 QKLKMI--CLGEAFNGKITKTARSHGKKFQVSIQQEMSRILGN 594 +K +I + F G TKT GKK+ V+ + L N Sbjct: 202 EKRTIIHQAIKSLFPGLETKTEDREGKKYIVAYHAAGKKALAN 244
>Q6FNU6:PPID_CANGA Peptidyl-prolyl cis-trans isomerase D - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 371 Score = 31.2 bits (69), Expect = 8.8 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +1 Query: 277 GDRVDSALKDMAVVMKQQDRAEEAIEAIRSFRHLCSRQAQESLDNLLIDLYKKCGK 444 GD + +LKD A V + E I+AI + + + ++Q +E + + YKKC K Sbjct: 194 GDNYEESLKDDAKV--DLKKVETVIKAIETVKDIGTKQFKEQNYEVALAKYKKCDK 247
>P16581:LYAM2_HUMAN E-selectin precursor - Homo sapiens (Human)| Length = 610 Score = 31.2 bits (69), Expect = 8.8 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -2 Query: 643 PIQQLHSCSAACKPSQGYPECATSPAGS-RPGTSC 542 P+ + C+A P +GY C S +GS R G+SC Sbjct: 360 PVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSC 394 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 179,004,133 Number of extensions: 3610915 Number of successful extensions: 11784 Number of sequences better than 10.0: 34 Number of HSP's gapped: 11768 Number of HSP's successfully gapped: 34 Length of query: 396 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 281 Effective length of database: 69,142,514 Effective search space: 19429046434 Effective search space used: 19429046434 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
