>ref|NM_001049961.1| Oryza sativa (japonica cultivar-group) Os01g0585600 (Os01g0585600)
mRNA, complete cds
Length = 3143
Score = 670 bits (338), Expect = 0.0
Identities = 908/1096 (82%), Gaps = 14/1096 (1%)
Strand = Plus / Plus
Query: 1150 aagagcagggttctgggtgatgaaaactcatcaatggtgagcagctgggtaacaaaggac 1209
||||| |||| ||| |||||||| || ||||||||||| ||| ||||| |||||||||
Sbjct: 1474 aagagtagggctctaggtgatgacaattcatcaatggttagc---tgggtgacaaaggac 1530
Query: 1210 tcagactcttcggttatggcctgggcgaatgacaagtcactggtagaaatagccaaggag 1269
|||||| |||| | ||||||||| || | | ||||| |||| || ||| |||||||||
Sbjct: 1531 tcagacacttcagcgatggcctggaggagtaagaagtcgctggcaggaattgccaaggag 1590
Query: 1270 attgatgagtacttcttgaaagcagccgcaagtgggactgatgttgttatacttttggat 1329
|||||||| ||||||||||||||||| || ||||||| ||| | || |||||||||||
Sbjct: 1591 attgatgaatacttcttgaaagcagcggcgagtgggagtgacatcgtcatacttttggac 1650
Query: 1330 tctgctaccgggcggctagatccttcagaggtgcaagtaaagaaaggaaaaaattcgaag 1389
||| || |||| || |||||| |||||| | | | ||| | |||||||||||| ||
Sbjct: 1651 tcttctggtgggcagccagatccctcagagttagaggcaaacagaggaaaaaattccaaa 1710
Query: 1390 tctgccaaggttttctctacactttcttggagttggtcattcaagtctgtgcatgctaac 1449
|| ||||||||||| || ||| |||||||||| ||||||||||| |||| ||| |||||
Sbjct: 1711 tccgccaaggttttttccacaatttcttggagctggtcattcaaatctgcgcaagctaat 1770
Query: 1450 agagaatcctcaa---------gtgatgcttgtggatacggttatcatgggaaaacacta 1500
||| ||||||||| ||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 1771 agacaatcctcaatgcattcaagtgatgcctctggatatggttaccatggcaaaacacta 1830
Query: 1501 gataagctttatgacgaggagcaaaaactctatcagttagttaaggatgaagaatttgca 1560
|| || |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1831 gagaaactttatgaagaggagcaaaaactctacaagttagtcaaggatgaagaatttgca 1890
Query: 1561 aggctcgaatacagaaagtacagttcattgctacagaagctagaatcaggggagcatgat 1620
|||||| | ||||||||| ||| || |||||||| | ||||||||||| || ||||||
Sbjct: 1891 aggctccagtacagaaagaacacctcgttgctacaaagactagaatcaggtgaccatgat 1950
Query: 1621 aggctgcaagcagagaaagttcgggatattatcgaagaactgcaaactcggataatgtcc 1680
| |||| ||||||||||| || |||| ||| || ||| ||||| |||||||||| ||
Sbjct: 1951 aaattgcatgcagagaaagtgcgagataatatagaggaattgcaagctcggataatctct 2010
Query: 1681 ttagaggaagctgtaagtttgaaatgtttgaccatatcaaagctcagggatgaggagcta 1740
|| ||||||||||| |||||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 2011 ttggaggaagctgttggtttgacatgtttgtccatatcaaagctcagagatgaggagtta 2070
Query: 1741 tatcctcaggttattgaattagctgcagggcttgtacatatgtggagaaacatgtacggg 1800
||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| | |
Sbjct: 2071 tatcctcagattattgaattatctgcagggcttgtgcatatgtggagaaacatgtatgag 2130
Query: 1801 tgccataaggttcagaaccatatcgcccagcaagccagtctccttggcaaccaacctggg 1860
|||||| ||||||||||||| || ||||||||||||| ||| || ||||| ||| |||
Sbjct: 2131 tgccatcaggttcagaaccacattgcccagcaagccaatcttctaggcaatttaccaggg 2190
Query: 1861 agtgagccgacgactgactcccattactatgcaacatctcagttggaaggcgaaatctct 1920
| ||| || || |||||| | |||| | |||||||||||| |||||| ||| | |||
Sbjct: 2191 aatgaaccaacaactgacactcattgtcaggcaacatctcagctggaagttgaagtttct 2250
Query: 1921 gcatggcagaattctttctgtaatctgatcaccttgcagcgtgagtatgtaactatcctt 1980
|||||||| | ||| ||||| ||||| |||||||| |||||||| || ||||| ||||||
Sbjct: 2251 gcatggcatagttcattctgcaatctcatcaccttacagcgtgactacgtaaccatcctt 2310
Query: 1981 aaccaatggattggactcaccgattgtcttcctgataatgacggcttcatgagaagttca 2040
||||| |||||| |||||| ||||| || |||||||| || ||||| |||| ||||||
Sbjct: 2311 aaccagtggattaaactcactgattgcctgcctgataacgatggctttatgaaaagttcg 2370
Query: 2041 tctggaatccgtagcctctgtggggaactcgagcacgctctt-gagaagttacctgacaa 2099
|| ||||| ||||| ||||||| |||||| ||| |||||| || | |||||||| ||
Sbjct: 2371 tcaggaattcgtagtctctgtgcagaactccagcgagctcttacagga-ttacctgagaa 2429
Query: 2100 ggtagctgcagaagcaataaaagcttttctgtcagtcatacactctatcgttatacagca 2159
||||||||||||||||||||| ||||||||||||| |||||| |||| ||| |||||||
Sbjct: 2430 ggtagctgcagaagcaataaagacttttctgtcagttatacacactatagttgtacagca 2489
Query: 2160 ggctgaggagcgtcagctgaagaaaaagtcggacagcatcgagagcaagttccacgccca 2219
| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 2490 gactgaggagcgtcaactgaagaaaaagtccgaccaaatcgagagcaagttccataccca 2549
Query: 2220 gctggagaaacacagc 2235
| | ||||||||||||
Sbjct: 2550 gttagagaaacacagc 2565
Score = 137 bits (69), Expect = 2e-28
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 464 ggcagatgggttgcaggcactccaaagtggaggacgaggaggcggtgaggagatgcaggg 523
|||| |||||||||| |||||||| |||||||| |||||||| || ||||| |||| ||
Sbjct: 773 ggcaaatgggttgcacacactccaaggtggaggatgaggaggccgtcaggaggtgcaagg 832
Query: 524 acaggaggaagctcatgaagcaactcgtgcgccgccgtgtcgaccttgcagctgcacaca 583
| ||||||||||| |||||||| || |||| ||||| || || ||||| |||||||| |
Sbjct: 833 ataggaggaagctgatgaagcagctaatgcggcgccgagttgagcttgcggctgcacaaa 892
Query: 584 ttacctacctgcaggctctccgcaacacaggagccactctccggcaattcgccgaggtgg 643
||||||||||| | ||||| |||||||||||||| || || ||||||||||||||||
Sbjct: 893 ccgcctacctgcagtcactccgaaacacaggagccacacttcgacaattcgccgaggtgg 952
Query: 644 agactgcat 652
|| ||||||
Sbjct: 953 agtctgcat 961
Score = 135 bits (68), Expect = 1e-27
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 2316 gttcagaaagaaggtcgaggaggagaaggccaggtacctcaattccttgaggaccagtcg 2375
||||| |||| |||| || ||||||||||| ||||| || || ||| ||||||| |||||
Sbjct: 2616 gttcaaaaagcaggttgaagaggagaaggctaggtatctgaactccgtgaggactagtcg 2675
Query: 2376 agccatgacgctgaaccatcttcagacgagcctcccgaacgtgttccatgccctgacggg 2435
||||||||| |||||| |||||||||||||||| || || ||||||||||| |||| |||
Sbjct: 2676 agccatgacactgaacaatcttcagacgagccttccaaatgtgttccatgctctgatggg 2735
Query: 2436 gttctcaggagtctgcgtgcaggtgtttgaaggcatcagccgatgcag 2483
||| || ||||| |||||||||| ||| ||||| ||||| |||||||
Sbjct: 2736 gttttccggagtatgcgtgcaggcgttcgaaggtatcagtagatgcag 2783
Score = 119 bits (60), Expect = 6e-23
Identities = 290/362 (80%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 727 cctccggcatactctgtgacttcttccatgccaccacactccgtgacatcctcaatgccg 786
||||| |||||||| ||||| || || ||||||| |||| ||||||||||| ||||
Sbjct: 1051 cctcctgcatactcagtgacatcctcagtgccaccgtactcgatgacatcctcattgcca 1110
Query: 787 ccatcaccactccccccaccactcataccgtttagtccgataaggataagaaagagggag 846
|| ||||||| ||| ||||||| ||||||||||||| ||| |||||| |||| |
Sbjct: 1111 ccctcaccacgccctccaccaccgctaccgtttagtccaatagtgataag---gaggaaa 1167
Query: 847 aagagagatggtgaactcgacggggatgattccacggatgaagacgacgacactgacagc 906
|||||||| |||||||| || | ||||||||| || || || ||||||||||||||||||
Sbjct: 1168 aagagagacggtgaacttgatgaggatgattctacagacgacgacgacgacactgacagc 1227
Query: 907 tgctcaacgcctctgcccccaccgccgccgcccggtatggagtgggagtacacggaccca 966
||||| || ||||| || || || ||||| || || | |||||||||||| ||| ||
Sbjct: 1228 tgctcgactcctctaccacctcccccgccaccaggggttgagtgggagtacttggaacct 1287
Query: 967 atcaccatgcgtcccttgtattttcttccatcttcgttggctgatcagga-cgataaaga 1025
| | ||||||||||| ||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 1288 tttgcaatgcgtcccttaaatt---ttccatcttcattggctgat-aggattgataaaga 1343
Query: 1026 agtggcctcacaggtcagcatggatgacgat---tgggtggaaacaaacatagaatttga 1082
|| |||||||||||| | ||||||||| ||| |||||||| || |||| |||||||||
Sbjct: 1344 agcggcctcacaggtgaccatggatgatgataactgggtggagactaacacagaatttga 1403
Query: 1083 tg 1084
||
Sbjct: 1404 tg 1405
>dbj|AK065984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045J07, full
insert sequence
Length = 1962
Score = 670 bits (338), Expect = 0.0
Identities = 908/1096 (82%), Gaps = 14/1096 (1%)
Strand = Plus / Plus
Query: 1150 aagagcagggttctgggtgatgaaaactcatcaatggtgagcagctgggtaacaaaggac 1209
||||| |||| ||| |||||||| || ||||||||||| ||| ||||| |||||||||
Sbjct: 283 aagagtagggctctaggtgatgacaattcatcaatggttagc---tgggtgacaaaggac 339
Query: 1210 tcagactcttcggttatggcctgggcgaatgacaagtcactggtagaaatagccaaggag 1269
|||||| |||| | ||||||||| || | | ||||| |||| || ||| |||||||||
Sbjct: 340 tcagacacttcagcgatggcctggaggagtaagaagtcgctggcaggaattgccaaggag 399
Query: 1270 attgatgagtacttcttgaaagcagccgcaagtgggactgatgttgttatacttttggat 1329
|||||||| ||||||||||||||||| || ||||||| ||| | || |||||||||||
Sbjct: 400 attgatgaatacttcttgaaagcagcggcgagtgggagtgacatcgtcatacttttggac 459
Query: 1330 tctgctaccgggcggctagatccttcagaggtgcaagtaaagaaaggaaaaaattcgaag 1389
||| || |||| || |||||| |||||| | | | ||| | |||||||||||| ||
Sbjct: 460 tcttctggtgggcagccagatccctcagagttagaggcaaacagaggaaaaaattccaaa 519
Query: 1390 tctgccaaggttttctctacactttcttggagttggtcattcaagtctgtgcatgctaac 1449
|| ||||||||||| || ||| |||||||||| ||||||||||| |||| ||| |||||
Sbjct: 520 tccgccaaggttttttccacaatttcttggagctggtcattcaaatctgcgcaagctaat 579
Query: 1450 agagaatcctcaa---------gtgatgcttgtggatacggttatcatgggaaaacacta 1500
||| ||||||||| ||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 580 agacaatcctcaatgcattcaagtgatgcctctggatatggttaccatggcaaaacacta 639
Query: 1501 gataagctttatgacgaggagcaaaaactctatcagttagttaaggatgaagaatttgca 1560
|| || |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 640 gagaaactttatgaagaggagcaaaaactctacaagttagtcaaggatgaagaatttgca 699
Query: 1561 aggctcgaatacagaaagtacagttcattgctacagaagctagaatcaggggagcatgat 1620
|||||| | ||||||||| ||| || |||||||| | ||||||||||| || ||||||
Sbjct: 700 aggctccagtacagaaagaacacctcgttgctacaaagactagaatcaggtgaccatgat 759
Query: 1621 aggctgcaagcagagaaagttcgggatattatcgaagaactgcaaactcggataatgtcc 1680
| |||| ||||||||||| || |||| ||| || ||| ||||| |||||||||| ||
Sbjct: 760 aaattgcatgcagagaaagtgcgagataatatagaggaattgcaagctcggataatctct 819
Query: 1681 ttagaggaagctgtaagtttgaaatgtttgaccatatcaaagctcagggatgaggagcta 1740
|| ||||||||||| |||||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 820 ttggaggaagctgttggtttgacatgtttgtccatatcaaagctcagagatgaggagtta 879
Query: 1741 tatcctcaggttattgaattagctgcagggcttgtacatatgtggagaaacatgtacggg 1800
||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| | |
Sbjct: 880 tatcctcagattattgaattatctgcagggcttgtgcatatgtggagaaacatgtatgag 939
Query: 1801 tgccataaggttcagaaccatatcgcccagcaagccagtctccttggcaaccaacctggg 1860
|||||| ||||||||||||| || ||||||||||||| ||| || ||||| ||| |||
Sbjct: 940 tgccatcaggttcagaaccacattgcccagcaagccaatcttctaggcaatttaccaggg 999
Query: 1861 agtgagccgacgactgactcccattactatgcaacatctcagttggaaggcgaaatctct 1920
| ||| || || |||||| | |||| | |||||||||||| |||||| ||| | |||
Sbjct: 1000 aatgaaccaacaactgacactcattgtcaggcaacatctcagctggaagttgaagtttct 1059
Query: 1921 gcatggcagaattctttctgtaatctgatcaccttgcagcgtgagtatgtaactatcctt 1980
|||||||| | ||| ||||| ||||| |||||||| |||||||| || ||||| ||||||
Sbjct: 1060 gcatggcatagttcattctgcaatctcatcaccttacagcgtgactacgtaaccatcctt 1119
Query: 1981 aaccaatggattggactcaccgattgtcttcctgataatgacggcttcatgagaagttca 2040
||||| |||||| |||||| ||||| || |||||||| || ||||| |||| ||||||
Sbjct: 1120 aaccagtggattaaactcactgattgcctgcctgataacgatggctttatgaaaagttcg 1179
Query: 2041 tctggaatccgtagcctctgtggggaactcgagcacgctctt-gagaagttacctgacaa 2099
|| ||||| ||||| ||||||| |||||| ||| |||||| || | |||||||| ||
Sbjct: 1180 tcaggaattcgtagtctctgtgcagaactccagcgagctcttacagga-ttacctgagaa 1238
Query: 2100 ggtagctgcagaagcaataaaagcttttctgtcagtcatacactctatcgttatacagca 2159
||||||||||||||||||||| ||||||||||||| |||||| |||| ||| |||||||
Sbjct: 1239 ggtagctgcagaagcaataaagacttttctgtcagttatacacactatagttgtacagca 1298
Query: 2160 ggctgaggagcgtcagctgaagaaaaagtcggacagcatcgagagcaagttccacgccca 2219
| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 1299 gactgaggagcgtcaactgaagaaaaagtccgaccaaatcgagagcaagttccataccca 1358
Query: 2220 gctggagaaacacagc 2235
| | ||||||||||||
Sbjct: 1359 gttagagaaacacagc 1374
Score = 123 bits (62), Expect = 4e-24
Identities = 125/146 (85%)
Strand = Plus / Plus
Query: 2338 gagaaggccaggtacctcaattccttgaggaccagtcgagccatgacgctgaaccatctt 2397
|||||||| ||||| || || ||| ||||||| |||||||||||||| |||||| |||||
Sbjct: 1446 gagaaggctaggtatctgaactccgtgaggactagtcgagccatgacactgaacaatctt 1505
Query: 2398 cagacgagcctcccgaacgtgttccatgccctgacggggttctcaggagtctgcgtgcag 2457
||||||||||| || || ||||||||||| |||| |||||| || ||||| |||||||||
Sbjct: 1506 cagacgagccttccaaatgtgttccatgctctgatggggttttccggagtatgcgtgcag 1565
Query: 2458 gtgtttgaaggcatcagccgatgcag 2483
| ||| ||||| ||||| |||||||
Sbjct: 1566 gcgttcgaaggtatcagtagatgcag 1591
Score = 75.8 bits (38), Expect = 8e-10
Identities = 176/218 (80%), Gaps = 8/218 (3%)
Strand = Plus / Plus
Query: 871 gatgattccacggatgaagacgacgacactgacagctgctcaacgcctctgcccccaccg 930
|||||||| || || || ||||||||||||||||||||||| || ||||| || || ||
Sbjct: 1 gatgattctacagacgacgacgacgacactgacagctgctcgactcctctaccacctccc 60
Query: 931 ccgccgcccggtatggagtgggagtacacggacccaatcaccatgcgtcccttgtatttt 990
||||| || || | |||||||||||| ||| || | | ||||||||||| |||||
Sbjct: 61 ccgccaccaggggttgagtgggagtacttggaaccttttgcaatgcgtcccttaaatttt 120
Query: 991 cttccatcttcgttggctgatcaggac-gataaagaagtggcctcacaggtcagcatgga 1049
| ||||||| ||||||||| |||| |||||||||| |||||||||||| | ||||||
Sbjct: 121 c---catcttcattggctgat-aggattgataaagaagcggcctcacaggtgaccatgga 176
Query: 1050 tgacgat---tgggtggaaacaaacatagaatttgatg 1084
||| ||| |||||||| || |||| |||||||||||
Sbjct: 177 tgatgataactgggtggagactaacacagaatttgatg 214
>dbj|AK064970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B11, full
insert sequence
Length = 3145
Score = 670 bits (338), Expect = 0.0
Identities = 908/1096 (82%), Gaps = 14/1096 (1%)
Strand = Plus / Plus
Query: 1150 aagagcagggttctgggtgatgaaaactcatcaatggtgagcagctgggtaacaaaggac 1209
||||| |||| ||| |||||||| || ||||||||||| ||| ||||| |||||||||
Sbjct: 1475 aagagtagggctctaggtgatgacaattcatcaatggttagc---tgggtgacaaaggac 1531
Query: 1210 tcagactcttcggttatggcctgggcgaatgacaagtcactggtagaaatagccaaggag 1269
|||||| |||| | ||||||||| || | | ||||| |||| || ||| |||||||||
Sbjct: 1532 tcagacacttcagcgatggcctggaggagtaagaagtcgctggcaggaattgccaaggag 1591
Query: 1270 attgatgagtacttcttgaaagcagccgcaagtgggactgatgttgttatacttttggat 1329
|||||||| ||||||||||||||||| || ||||||| ||| | || |||||||||||
Sbjct: 1592 attgatgaatacttcttgaaagcagcggcgagtgggagtgacatcgtcatacttttggac 1651
Query: 1330 tctgctaccgggcggctagatccttcagaggtgcaagtaaagaaaggaaaaaattcgaag 1389
||| || |||| || |||||| |||||| | | | ||| | |||||||||||| ||
Sbjct: 1652 tcttctggtgggcagccagatccctcagagttagaggcaaacagaggaaaaaattccaaa 1711
Query: 1390 tctgccaaggttttctctacactttcttggagttggtcattcaagtctgtgcatgctaac 1449
|| ||||||||||| || ||| |||||||||| ||||||||||| |||| ||| |||||
Sbjct: 1712 tccgccaaggttttttccacaatttcttggagctggtcattcaaatctgcgcaagctaat 1771
Query: 1450 agagaatcctcaa---------gtgatgcttgtggatacggttatcatgggaaaacacta 1500
||| ||||||||| ||||||| | |||||| ||||| ||||| |||||||||
Sbjct: 1772 agacaatcctcaatgcattcaagtgatgcctctggatatggttaccatggcaaaacacta 1831
Query: 1501 gataagctttatgacgaggagcaaaaactctatcagttagttaaggatgaagaatttgca 1560
|| || |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1832 gagaaactttatgaagaggagcaaaaactctacaagttagtcaaggatgaagaatttgca 1891
Query: 1561 aggctcgaatacagaaagtacagttcattgctacagaagctagaatcaggggagcatgat 1620
|||||| | ||||||||| ||| || |||||||| | ||||||||||| || ||||||
Sbjct: 1892 aggctccagtacagaaagaacacctcgttgctacaaagactagaatcaggtgaccatgat 1951
Query: 1621 aggctgcaagcagagaaagttcgggatattatcgaagaactgcaaactcggataatgtcc 1680
| |||| ||||||||||| || |||| ||| || ||| ||||| |||||||||| ||
Sbjct: 1952 aaattgcatgcagagaaagtgcgagataatatagaggaattgcaagctcggataatctct 2011
Query: 1681 ttagaggaagctgtaagtttgaaatgtttgaccatatcaaagctcagggatgaggagcta 1740
|| ||||||||||| |||||| ||||||| |||||||||||||||| ||||||||| ||
Sbjct: 2012 ttggaggaagctgttggtttgacatgtttgtccatatcaaagctcagagatgaggagtta 2071
Query: 1741 tatcctcaggttattgaattagctgcagggcttgtacatatgtggagaaacatgtacggg 1800
||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| | |
Sbjct: 2072 tatcctcagattattgaattatctgcagggcttgtgcatatgtggagaaacatgtatgag 2131
Query: 1801 tgccataaggttcagaaccatatcgcccagcaagccagtctccttggcaaccaacctggg 1860
|||||| ||||||||||||| || ||||||||||||| ||| || ||||| ||| |||
Sbjct: 2132 tgccatcaggttcagaaccacattgcccagcaagccaatcttctaggcaatttaccaggg 2191
Query: 1861 agtgagccgacgactgactcccattactatgcaacatctcagttggaaggcgaaatctct 1920
| ||| || || |||||| | |||| | |||||||||||| |||||| ||| | |||
Sbjct: 2192 aatgaaccaacaactgacactcattgtcaggcaacatctcagctggaagttgaagtttct 2251
Query: 1921 gcatggcagaattctttctgtaatctgatcaccttgcagcgtgagtatgtaactatcctt 1980
|||||||| | ||| ||||| ||||| |||||||| |||||||| || ||||| ||||||
Sbjct: 2252 gcatggcatagttcattctgcaatctcatcaccttacagcgtgactacgtaaccatcctt 2311
Query: 1981 aaccaatggattggactcaccgattgtcttcctgataatgacggcttcatgagaagttca 2040
||||| |||||| |||||| ||||| || |||||||| || ||||| |||| ||||||
Sbjct: 2312 aaccagtggattaaactcactgattgcctgcctgataacgatggctttatgaaaagttcg 2371
Query: 2041 tctggaatccgtagcctctgtggggaactcgagcacgctctt-gagaagttacctgacaa 2099
|| ||||| ||||| ||||||| |||||| ||| |||||| || | |||||||| ||
Sbjct: 2372 tcaggaattcgtagtctctgtgcagaactccagcgagctcttacagga-ttacctgagaa 2430
Query: 2100 ggtagctgcagaagcaataaaagcttttctgtcagtcatacactctatcgttatacagca 2159
||||||||||||||||||||| ||||||||||||| |||||| |||| ||| |||||||
Sbjct: 2431 ggtagctgcagaagcaataaagacttttctgtcagttatacacactatagttgtacagca 2490
Query: 2160 ggctgaggagcgtcagctgaagaaaaagtcggacagcatcgagagcaagttccacgccca 2219
| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||
Sbjct: 2491 gactgaggagcgtcaactgaagaaaaagtccgaccaaatcgagagcaagttccataccca 2550
Query: 2220 gctggagaaacacagc 2235
| | ||||||||||||
Sbjct: 2551 gttagagaaacacagc 2566
Score = 137 bits (69), Expect = 2e-28
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 464 ggcagatgggttgcaggcactccaaagtggaggacgaggaggcggtgaggagatgcaggg 523
|||| |||||||||| |||||||| |||||||| |||||||| || ||||| |||| ||
Sbjct: 774 ggcaaatgggttgcacacactccaaggtggaggatgaggaggccgtcaggaggtgcaagg 833
Query: 524 acaggaggaagctcatgaagcaactcgtgcgccgccgtgtcgaccttgcagctgcacaca 583
| ||||||||||| |||||||| || |||| ||||| || || ||||| |||||||| |
Sbjct: 834 ataggaggaagctgatgaagcagctaatgcggcgccgagttgagcttgcggctgcacaaa 893
Query: 584 ttacctacctgcaggctctccgcaacacaggagccactctccggcaattcgccgaggtgg 643
||||||||||| | ||||| |||||||||||||| || || ||||||||||||||||
Sbjct: 894 ccgcctacctgcagtcactccgaaacacaggagccacacttcgacaattcgccgaggtgg 953
Query: 644 agactgcat 652
|| ||||||
Sbjct: 954 agtctgcat 962
Score = 135 bits (68), Expect = 1e-27
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 2316 gttcagaaagaaggtcgaggaggagaaggccaggtacctcaattccttgaggaccagtcg 2375
||||| |||| |||| || ||||||||||| ||||| || || ||| ||||||| |||||
Sbjct: 2617 gttcaaaaagcaggttgaagaggagaaggctaggtatctgaactccgtgaggactagtcg 2676
Query: 2376 agccatgacgctgaaccatcttcagacgagcctcccgaacgtgttccatgccctgacggg 2435
||||||||| |||||| |||||||||||||||| || || ||||||||||| |||| |||
Sbjct: 2677 agccatgacactgaacaatcttcagacgagccttccaaatgtgttccatgctctgatggg 2736
Query: 2436 gttctcaggagtctgcgtgcaggtgtttgaaggcatcagccgatgcag 2483
||| || ||||| |||||||||| ||| ||||| ||||| |||||||
Sbjct: 2737 gttttccggagtatgcgtgcaggcgttcgaaggtatcagtagatgcag 2784
Score = 119 bits (60), Expect = 6e-23
Identities = 290/362 (80%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 727 cctccggcatactctgtgacttcttccatgccaccacactccgtgacatcctcaatgccg 786
||||| |||||||| ||||| || || ||||||| |||| ||||||||||| ||||
Sbjct: 1052 cctcctgcatactcagtgacatcctcagtgccaccgtactcgatgacatcctcattgcca 1111
Query: 787 ccatcaccactccccccaccactcataccgtttagtccgataaggataagaaagagggag 846
|| ||||||| ||| ||||||| ||||||||||||| ||| |||||| |||| |
Sbjct: 1112 ccctcaccacgccctccaccaccgctaccgtttagtccaatagtgataag---gaggaaa 1168
Query: 847 aagagagatggtgaactcgacggggatgattccacggatgaagacgacgacactgacagc 906
|||||||| |||||||| || | ||||||||| || || || ||||||||||||||||||
Sbjct: 1169 aagagagacggtgaacttgatgaggatgattctacagacgacgacgacgacactgacagc 1228
Query: 907 tgctcaacgcctctgcccccaccgccgccgcccggtatggagtgggagtacacggaccca 966
||||| || ||||| || || || ||||| || || | |||||||||||| ||| ||
Sbjct: 1229 tgctcgactcctctaccacctcccccgccaccaggggttgagtgggagtacttggaacct 1288
Query: 967 atcaccatgcgtcccttgtattttcttccatcttcgttggctgatcagga-cgataaaga 1025
| | ||||||||||| ||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 1289 tttgcaatgcgtcccttaaatt---ttccatcttcattggctgat-aggattgataaaga 1344
Query: 1026 agtggcctcacaggtcagcatggatgacgat---tgggtggaaacaaacatagaatttga 1082
|| |||||||||||| | ||||||||| ||| |||||||| || |||| |||||||||
Sbjct: 1345 agcggcctcacaggtgaccatggatgatgataactgggtggagactaacacagaatttga 1404
Query: 1083 tg 1084
||
Sbjct: 1405 tg 1406
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 188 bits (95), Expect = 7e-44
Identities = 194/227 (85%)
Strand = Plus / Plus
Query: 1544 aggatgaagaatttgcaaggctcgaatacagaaagtacagttcattgctacagaagctag 1603
||||||||||||||||||||||| | ||||||||| ||| || |||||||| | ||||
Sbjct: 22766611 aggatgaagaatttgcaaggctccagtacagaaagaacacctcgttgctacaaagactag 22766670
Query: 1604 aatcaggggagcatgataggctgcaagcagagaaagttcgggatattatcgaagaactgc 1663
||||||| || ||||||| |||| ||||||||||| || |||| ||| || ||| |||
Sbjct: 22766671 aatcaggtgaccatgataaattgcatgcagagaaagtgcgagataatatagaggaattgc 22766730
Query: 1664 aaactcggataatgtccttagaggaagctgtaagtttgaaatgtttgaccatatcaaagc 1723
|| |||||||||| || || ||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 22766731 aagctcggataatctctttggaggaagctgttggtttgacatgtttgtccatatcaaagc 22766790
Query: 1724 tcagggatgaggagctatatcctcaggttattgaattagctgcaggg 1770
|||| ||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 22766791 tcagagatgaggagttatatcctcagattattgaattatctgcaggg 22766837
Score = 178 bits (90), Expect = 7e-41
Identities = 243/294 (82%)
Strand = Plus / Plus
Query: 1769 ggcttgtacatatgtggagaaacatgtacgggtgccataaggttcagaaccatatcgccc 1828
||||||| |||||||||||||||||||| | ||||||| ||||||||||||| || ||||
Sbjct: 22767418 ggcttgtgcatatgtggagaaacatgtatgagtgccatcaggttcagaaccacattgccc 22767477
Query: 1829 agcaagccagtctccttggcaaccaacctgggagtgagccgacgactgactcccattact 1888
||||||||| ||| || ||||| ||| |||| ||| || || |||||| | ||||
Sbjct: 22767478 agcaagccaatcttctaggcaatttaccagggaatgaaccaacaactgacactcattgtc 22767537
Query: 1889 atgcaacatctcagttggaaggcgaaatctctgcatggcagaattctttctgtaatctga 1948
| |||||||||||| |||||| ||| | ||||||||||| | ||| ||||| ||||| |
Sbjct: 22767538 aggcaacatctcagctggaagttgaagtttctgcatggcatagttcattctgcaatctca 22767597
Query: 1949 tcaccttgcagcgtgagtatgtaactatccttaaccaatggattggactcaccgattgtc 2008
||||||| |||||||| || ||||| ||||||||||| |||||| |||||| ||||| |
Sbjct: 22767598 tcaccttacagcgtgactacgtaaccatccttaaccagtggattaaactcactgattgcc 22767657
Query: 2009 ttcctgataatgacggcttcatgagaagttcatctggaatccgtagcctctgtg 2062
| |||||||| || ||||| |||| |||||| || ||||| ||||| |||||||
Sbjct: 22767658 tgcctgataacgatggctttatgaaaagttcgtcaggaattcgtagtctctgtg 22767711
Score = 145 bits (73), Expect = 1e-30
Identities = 121/137 (88%)
Strand = Plus / Plus
Query: 2099 aggtagctgcagaagcaataaaagcttttctgtcagtcatacactctatcgttatacagc 2158
|||||||||||||||||||||| ||||||||||||| |||||| |||| ||| ||||||
Sbjct: 22767966 aggtagctgcagaagcaataaagacttttctgtcagttatacacactatagttgtacagc 22768025
Query: 2159 aggctgaggagcgtcagctgaagaaaaagtcggacagcatcgagagcaagttccacgccc 2218
|| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||
Sbjct: 22768026 agactgaggagcgtcaactgaagaaaaagtccgaccaaatcgagagcaagttccataccc 22768085
Query: 2219 agctggagaaacacagc 2235
|| | ||||||||||||
Sbjct: 22768086 agttagagaaacacagc 22768102
Score = 137 bits (69), Expect = 2e-28
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 464 ggcagatgggttgcaggcactccaaagtggaggacgaggaggcggtgaggagatgcaggg 523
|||| |||||||||| |||||||| |||||||| |||||||| || ||||| |||| ||
Sbjct: 22764973 ggcaaatgggttgcacacactccaaggtggaggatgaggaggccgtcaggaggtgcaagg 22765032
Query: 524 acaggaggaagctcatgaagcaactcgtgcgccgccgtgtcgaccttgcagctgcacaca 583
| ||||||||||| |||||||| || |||| ||||| || || ||||| |||||||| |
Sbjct: 22765033 ataggaggaagctgatgaagcagctaatgcggcgccgagttgagcttgcggctgcacaaa 22765092
Query: 584 ttacctacctgcaggctctccgcaacacaggagccactctccggcaattcgccgaggtgg 643
||||||||||| | ||||| |||||||||||||| || || ||||||||||||||||
Sbjct: 22765093 ccgcctacctgcagtcactccgaaacacaggagccacacttcgacaattcgccgaggtgg 22765152
Query: 644 agactgcat 652
|| ||||||
Sbjct: 22765153 agtctgcat 22765161
Score = 135 bits (68), Expect = 1e-27
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 2316 gttcagaaagaaggtcgaggaggagaaggccaggtacctcaattccttgaggaccagtcg 2375
||||| |||| |||| || ||||||||||| ||||| || || ||| ||||||| |||||
Sbjct: 22768153 gttcaaaaagcaggttgaagaggagaaggctaggtatctgaactccgtgaggactagtcg 22768212
Query: 2376 agccatgacgctgaaccatcttcagacgagcctcccgaacgtgttccatgccctgacggg 2435
||||||||| |||||| |||||||||||||||| || || ||||||||||| |||| |||
Sbjct: 22768213 agccatgacactgaacaatcttcagacgagccttccaaatgtgttccatgctctgatggg 22768272
Query: 2436 gttctcaggagtctgcgtgcaggtgtttgaaggcatcagccgatgcag 2483
||| || ||||| |||||||||| ||| ||||| ||||| |||||||
Sbjct: 22768273 gttttccggagtatgcgtgcaggcgttcgaaggtatcagtagatgcag 22768320
Score = 119 bits (60), Expect = 6e-23
Identities = 290/362 (80%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 727 cctccggcatactctgtgacttcttccatgccaccacactccgtgacatcctcaatgccg 786
||||| |||||||| ||||| || || ||||||| |||| ||||||||||| ||||
Sbjct: 22765251 cctcctgcatactcagtgacatcctcagtgccaccgtactcgatgacatcctcattgcca 22765310
Query: 787 ccatcaccactccccccaccactcataccgtttagtccgataaggataagaaagagggag 846
|| ||||||| ||| ||||||| ||||||||||||| ||| |||||| |||| |
Sbjct: 22765311 ccctcaccacgccctccaccaccgctaccgtttagtccaatagtgataag---gaggaaa 22765367
Query: 847 aagagagatggtgaactcgacggggatgattccacggatgaagacgacgacactgacagc 906
|||||||| |||||||| || | ||||||||| || || || ||||||||||||||||||
Sbjct: 22765368 aagagagacggtgaacttgatgaggatgattctacagacgacgacgacgacactgacagc 22765427
Query: 907 tgctcaacgcctctgcccccaccgccgccgcccggtatggagtgggagtacacggaccca 966
||||| || ||||| || || || ||||| || || | |||||||||||| ||| ||
Sbjct: 22765428 tgctcgactcctctaccacctcccccgccaccaggggttgagtgggagtacttggaacct 22765487
Query: 967 atcaccatgcgtcccttgtattttcttccatcttcgttggctgatcagga-cgataaaga 1025
| | ||||||||||| ||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 22765488 tttgcaatgcgtcccttaaatt---ttccatcttcattggctgat-aggattgataaaga 22765543
Query: 1026 agtggcctcacaggtcagcatggatgacgat---tgggtggaaacaaacatagaatttga 1082
|| |||||||||||| | ||||||||| ||| |||||||| || |||| |||||||||
Sbjct: 22765544 agcggcctcacaggtgaccatggatgatgataactgggtggagactaacacagaatttga 22765603
Query: 1083 tg 1084
||
Sbjct: 22765604 tg 22765605
Score = 115 bits (58), Expect = 9e-22
Identities = 150/182 (82%), Gaps = 9/182 (4%)
Strand = Plus / Plus
Query: 1374 aggaaaaaattcgaagtctgccaaggttttctctacactttcttggagttggtcattcaa 1433
|||||||||||| || || ||||||||||| || ||| |||||||||| |||||||||||
Sbjct: 22766169 aggaaaaaattccaaatccgccaaggttttttccacaatttcttggagctggtcattcaa 22766228
Query: 1434 gtctgtgcatgctaacagagaatcctcaa---------gtgatgcttgtggatacggtta 1484
|||| ||| ||||| ||| ||||||||| ||||||| | |||||| |||||
Sbjct: 22766229 atctgcgcaagctaatagacaatcctcaatgcattcaagtgatgcctctggatatggtta 22766288
Query: 1485 tcatgggaaaacactagataagctttatgacgaggagcaaaaactctatcagttagttaa 1544
||||| ||||||||||| || |||||||| ||||||||||||||||| ||||||| ||
Sbjct: 22766289 ccatggcaaaacactagagaaactttatgaagaggagcaaaaactctacaagttagtcaa 22766348
Query: 1545 gg 1546
||
Sbjct: 22766349 gg 22766350
Score = 105 bits (53), Expect = 9e-19
Identities = 148/179 (82%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 1150 aagagcagggttctgggtgatgaaaactcatcaatggtgagcagctgggtaacaaaggac 1209
||||| |||| ||| |||||||| || ||||||||||| ||| ||||| |||||||||
Sbjct: 22765674 aagagtagggctctaggtgatgacaattcatcaatggttagc---tgggtgacaaaggac 22765730
Query: 1210 tcagactcttcggttatggcctgggcgaatgacaagtcactggtagaaatagccaaggag 1269
|||||| |||| | ||||||||| || | | ||||| |||| || ||| |||||||||
Sbjct: 22765731 tcagacacttcagcgatggcctggaggagtaagaagtcgctggcaggaattgccaaggag 22765790
Query: 1270 attgatgagtacttcttgaaagcagccgcaagtgggactgatgttgttatacttttgga 1328
|||||||| ||||||||||||||||| || ||||||| ||| | || |||||||||||
Sbjct: 22765791 attgatgaatacttcttgaaagcagcggcgagtgggagtgacatcgtcatacttttgga 22765849
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0712E02
Length = 158084
Score = 188 bits (95), Expect = 7e-44
Identities = 194/227 (85%)
Strand = Plus / Plus
Query: 1544 aggatgaagaatttgcaaggctcgaatacagaaagtacagttcattgctacagaagctag 1603
||||||||||||||||||||||| | ||||||||| ||| || |||||||| | ||||
Sbjct: 84000 aggatgaagaatttgcaaggctccagtacagaaagaacacctcgttgctacaaagactag 84059
Query: 1604 aatcaggggagcatgataggctgcaagcagagaaagttcgggatattatcgaagaactgc 1663
||||||| || ||||||| |||| ||||||||||| || |||| ||| || ||| |||
Sbjct: 84060 aatcaggtgaccatgataaattgcatgcagagaaagtgcgagataatatagaggaattgc 84119
Query: 1664 aaactcggataatgtccttagaggaagctgtaagtttgaaatgtttgaccatatcaaagc 1723
|| |||||||||| || || ||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 84120 aagctcggataatctctttggaggaagctgttggtttgacatgtttgtccatatcaaagc 84179
Query: 1724 tcagggatgaggagctatatcctcaggttattgaattagctgcaggg 1770
|||| ||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 84180 tcagagatgaggagttatatcctcagattattgaattatctgcaggg 84226
Score = 178 bits (90), Expect = 7e-41
Identities = 243/294 (82%)
Strand = Plus / Plus
Query: 1769 ggcttgtacatatgtggagaaacatgtacgggtgccataaggttcagaaccatatcgccc 1828
||||||| |||||||||||||||||||| | ||||||| ||||||||||||| || ||||
Sbjct: 84807 ggcttgtgcatatgtggagaaacatgtatgagtgccatcaggttcagaaccacattgccc 84866
Query: 1829 agcaagccagtctccttggcaaccaacctgggagtgagccgacgactgactcccattact 1888
||||||||| ||| || ||||| ||| |||| ||| || || |||||| | ||||
Sbjct: 84867 agcaagccaatcttctaggcaatttaccagggaatgaaccaacaactgacactcattgtc 84926
Query: 1889 atgcaacatctcagttggaaggcgaaatctctgcatggcagaattctttctgtaatctga 1948
| |||||||||||| |||||| ||| | ||||||||||| | ||| ||||| ||||| |
Sbjct: 84927 aggcaacatctcagctggaagttgaagtttctgcatggcatagttcattctgcaatctca 84986
Query: 1949 tcaccttgcagcgtgagtatgtaactatccttaaccaatggattggactcaccgattgtc 2008
||||||| |||||||| || ||||| ||||||||||| |||||| |||||| ||||| |
Sbjct: 84987 tcaccttacagcgtgactacgtaaccatccttaaccagtggattaaactcactgattgcc 85046
Query: 2009 ttcctgataatgacggcttcatgagaagttcatctggaatccgtagcctctgtg 2062
| |||||||| || ||||| |||| |||||| || ||||| ||||| |||||||
Sbjct: 85047 tgcctgataacgatggctttatgaaaagttcgtcaggaattcgtagtctctgtg 85100
Score = 145 bits (73), Expect = 1e-30
Identities = 121/137 (88%)
Strand = Plus / Plus
Query: 2099 aggtagctgcagaagcaataaaagcttttctgtcagtcatacactctatcgttatacagc 2158
|||||||||||||||||||||| ||||||||||||| |||||| |||| ||| ||||||
Sbjct: 85355 aggtagctgcagaagcaataaagacttttctgtcagttatacacactatagttgtacagc 85414
Query: 2159 aggctgaggagcgtcagctgaagaaaaagtcggacagcatcgagagcaagttccacgccc 2218
|| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||
Sbjct: 85415 agactgaggagcgtcaactgaagaaaaagtccgaccaaatcgagagcaagttccataccc 85474
Query: 2219 agctggagaaacacagc 2235
|| | ||||||||||||
Sbjct: 85475 agttagagaaacacagc 85491
Score = 137 bits (69), Expect = 2e-28
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 464 ggcagatgggttgcaggcactccaaagtggaggacgaggaggcggtgaggagatgcaggg 523
|||| |||||||||| |||||||| |||||||| |||||||| || ||||| |||| ||
Sbjct: 82362 ggcaaatgggttgcacacactccaaggtggaggatgaggaggccgtcaggaggtgcaagg 82421
Query: 524 acaggaggaagctcatgaagcaactcgtgcgccgccgtgtcgaccttgcagctgcacaca 583
| ||||||||||| |||||||| || |||| ||||| || || ||||| |||||||| |
Sbjct: 82422 ataggaggaagctgatgaagcagctaatgcggcgccgagttgagcttgcggctgcacaaa 82481
Query: 584 ttacctacctgcaggctctccgcaacacaggagccactctccggcaattcgccgaggtgg 643
||||||||||| | ||||| |||||||||||||| || || ||||||||||||||||
Sbjct: 82482 ccgcctacctgcagtcactccgaaacacaggagccacacttcgacaattcgccgaggtgg 82541
Query: 644 agactgcat 652
|| ||||||
Sbjct: 82542 agtctgcat 82550
Score = 135 bits (68), Expect = 1e-27
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 2316 gttcagaaagaaggtcgaggaggagaaggccaggtacctcaattccttgaggaccagtcg 2375
||||| |||| |||| || ||||||||||| ||||| || || ||| ||||||| |||||
Sbjct: 85542 gttcaaaaagcaggttgaagaggagaaggctaggtatctgaactccgtgaggactagtcg 85601
Query: 2376 agccatgacgctgaaccatcttcagacgagcctcccgaacgtgttccatgccctgacggg 2435
||||||||| |||||| |||||||||||||||| || || ||||||||||| |||| |||
Sbjct: 85602 agccatgacactgaacaatcttcagacgagccttccaaatgtgttccatgctctgatggg 85661
Query: 2436 gttctcaggagtctgcgtgcaggtgtttgaaggcatcagccgatgcag 2483
||| || ||||| |||||||||| ||| ||||| ||||| |||||||
Sbjct: 85662 gttttccggagtatgcgtgcaggcgttcgaaggtatcagtagatgcag 85709
Score = 119 bits (60), Expect = 6e-23
Identities = 290/362 (80%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 727 cctccggcatactctgtgacttcttccatgccaccacactccgtgacatcctcaatgccg 786
||||| |||||||| ||||| || || ||||||| |||| ||||||||||| ||||
Sbjct: 82640 cctcctgcatactcagtgacatcctcagtgccaccgtactcgatgacatcctcattgcca 82699
Query: 787 ccatcaccactccccccaccactcataccgtttagtccgataaggataagaaagagggag 846
|| ||||||| ||| ||||||| ||||||||||||| ||| |||||| |||| |
Sbjct: 82700 ccctcaccacgccctccaccaccgctaccgtttagtccaatagtgataag---gaggaaa 82756
Query: 847 aagagagatggtgaactcgacggggatgattccacggatgaagacgacgacactgacagc 906
|||||||| |||||||| || | ||||||||| || || || ||||||||||||||||||
Sbjct: 82757 aagagagacggtgaacttgatgaggatgattctacagacgacgacgacgacactgacagc 82816
Query: 907 tgctcaacgcctctgcccccaccgccgccgcccggtatggagtgggagtacacggaccca 966
||||| || ||||| || || || ||||| || || | |||||||||||| ||| ||
Sbjct: 82817 tgctcgactcctctaccacctcccccgccaccaggggttgagtgggagtacttggaacct 82876
Query: 967 atcaccatgcgtcccttgtattttcttccatcttcgttggctgatcagga-cgataaaga 1025
| | ||||||||||| ||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 82877 tttgcaatgcgtcccttaaatt---ttccatcttcattggctgat-aggattgataaaga 82932
Query: 1026 agtggcctcacaggtcagcatggatgacgat---tgggtggaaacaaacatagaatttga 1082
|| |||||||||||| | ||||||||| ||| |||||||| || |||| |||||||||
Sbjct: 82933 agcggcctcacaggtgaccatggatgatgataactgggtggagactaacacagaatttga 82992
Query: 1083 tg 1084
||
Sbjct: 82993 tg 82994
Score = 115 bits (58), Expect = 9e-22
Identities = 150/182 (82%), Gaps = 9/182 (4%)
Strand = Plus / Plus
Query: 1374 aggaaaaaattcgaagtctgccaaggttttctctacactttcttggagttggtcattcaa 1433
|||||||||||| || || ||||||||||| || ||| |||||||||| |||||||||||
Sbjct: 83558 aggaaaaaattccaaatccgccaaggttttttccacaatttcttggagctggtcattcaa 83617
Query: 1434 gtctgtgcatgctaacagagaatcctcaa---------gtgatgcttgtggatacggtta 1484
|||| ||| ||||| ||| ||||||||| ||||||| | |||||| |||||
Sbjct: 83618 atctgcgcaagctaatagacaatcctcaatgcattcaagtgatgcctctggatatggtta 83677
Query: 1485 tcatgggaaaacactagataagctttatgacgaggagcaaaaactctatcagttagttaa 1544
||||| ||||||||||| || |||||||| ||||||||||||||||| ||||||| ||
Sbjct: 83678 ccatggcaaaacactagagaaactttatgaagaggagcaaaaactctacaagttagtcaa 83737
Query: 1545 gg 1546
||
Sbjct: 83738 gg 83739
Score = 105 bits (53), Expect = 9e-19
Identities = 148/179 (82%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 1150 aagagcagggttctgggtgatgaaaactcatcaatggtgagcagctgggtaacaaaggac 1209
||||| |||| ||| |||||||| || ||||||||||| ||| ||||| |||||||||
Sbjct: 83063 aagagtagggctctaggtgatgacaattcatcaatggttagc---tgggtgacaaaggac 83119
Query: 1210 tcagactcttcggttatggcctgggcgaatgacaagtcactggtagaaatagccaaggag 1269
|||||| |||| | ||||||||| || | | ||||| |||| || ||| |||||||||
Sbjct: 83120 tcagacacttcagcgatggcctggaggagtaagaagtcgctggcaggaattgccaaggag 83179
Query: 1270 attgatgagtacttcttgaaagcagccgcaagtgggactgatgttgttatacttttgga 1328
|||||||| ||||||||||||||||| || ||||||| ||| | || |||||||||||
Sbjct: 83180 attgatgaatacttcttgaaagcagcggcgagtgggagtgacatcgtcatacttttgga 83238
>emb|AL121808.4|CNS01DSJ Human chromosome 14 DNA sequence BAC C-2313O13 of library CalTech-D
from chromosome 14 of Homo sapiens (Human), complete
sequence
Length = 124041
Score = 44.1 bits (22), Expect = 2.7
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 714 gccgccaccaccgcctccggca 735
||||||||||||||||||||||
Sbjct: 98281 gccgccaccaccgcctccggca 98260
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 486,142,246
Number of extensions: 27158731
Number of successful extensions: 176302
Number of sequences better than 10.0: 29
Number of HSP's gapped: 176285
Number of HSP's successfully gapped: 73
Length of query: 2778
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2755
Effective length of database: 18,503,978,556
Effective search space: 50978460921780
Effective search space used: 50978460921780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)