ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf111h23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101444:Os02g0666800 | 229 | 3e-60 | 2 | Os08g0555200:Os08g0555200 | 29 | 3.9 | 3 | AK105089:Os08g0554900 | 29 | 5.0 | 4 | AK099230:Os08g0554900 | 29 | 5.0 | 5 | AK072840:Os08g0554900 | 29 | 5.0 | 6 | AK058785:Os08g0555000 | 29 | 5.0 |
|---|
>AK101444:Os02g0666800 | Length = 174 Score = 229 bits (583), Expect = 3e-60 Identities = 114/176 (64%), Positives = 135/176 (76%) Frame = +1 Query: 85 MANQGSKKIVERNRRRMDLLWRIILVSNVIYIVVRMAVMHSSFTWKHWIGLVVTSAAYFL 264 MA QG KK + N++RMDL+ R+IL +NVIYIVVRMAVMHSSFTWKHWIGL VTSAAYFL Sbjct: 1 MAKQGVKKTRDANKKRMDLILRLILAANVIYIVVRMAVMHSSFTWKHWIGLAVTSAAYFL 60 Query: 265 SYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDVIYITAFVQLTSIISGKFWWT 444 YKQLA+M++ EYS +N EL+++GYD+ GG+SEY++DVIYIT FVQL SI S KFWWT Sbjct: 61 PYKQLANMSEPEYS--ENGELINAGYDLNAGGMSEYLQDVIYITLFVQLMSIFSDKFWWT 118 Query: 445 YLVIPAFGGYKIFFLLKGTFFSGGSEGXXXXXXXXXXXXXXXXXASRGKMVKTRTR 612 YLVIPA+GGYKI LL+G FF G SEG ASRGK++KTRTR Sbjct: 119 YLVIPAYGGYKISGLLRGAFFGGSSEGEEEDEKTRKKREKMEKKASRGKIIKTRTR 174
>Os08g0555200:Os08g0555200 | Length = 590 Score = 29.3 bits (64), Expect = 3.9 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +1 Query: 211 FTWKHWIGLVVTSA--AYFLSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDV 384 F + +I L++T A A L Y QL S + R L+SG + I ++ Sbjct: 484 FLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWW----RSYLTSG----SSAIYLFLYAG 535 Query: 385 IYITAFVQLTSIISGKFWWTYLVIPAFGGYKIFFLLKGT 501 Y +Q+T ++SG ++ Y+++ +F FF+L GT Sbjct: 536 FYFFTKLQITKLVSGILYFGYMLLASFS----FFVLTGT 570
>AK105089:Os08g0554900 | Length = 288 Score = 28.9 bits (63), Expect = 5.0 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +1 Query: 211 FTWKHWIGLVVTSA--AYFLSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDV 384 F + +I L++T A A L Y QL S + R L+SG + I ++ Sbjct: 182 FLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWW----RSYLTSG----SSAIYLFLYAG 233 Query: 385 IYITAFVQLTSIISGKFWWTYLVIPAFGGYKIFFLLKGT 501 Y +Q+T ++SG ++ Y+++ +F FF+L GT Sbjct: 234 FYFFTKLQITKLVSGILFFGYMLLASFS----FFVLTGT 268
>AK099230:Os08g0554900 | Length = 646 Score = 28.9 bits (63), Expect = 5.0 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +1 Query: 211 FTWKHWIGLVVTSA--AYFLSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDV 384 F + +I L++T A A L Y QL S + R L+SG + I ++ Sbjct: 540 FLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWW----RSYLTSG----SSAIYLFLYAG 591 Query: 385 IYITAFVQLTSIISGKFWWTYLVIPAFGGYKIFFLLKGT 501 Y +Q+T ++SG ++ Y+++ +F FF+L GT Sbjct: 592 FYFFTKLQITKLVSGILFFGYMLLASFS----FFVLTGT 626
>AK072840:Os08g0554900 | Length = 646 Score = 28.9 bits (63), Expect = 5.0 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +1 Query: 211 FTWKHWIGLVVTSA--AYFLSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDV 384 F + +I L++T A A L Y QL S + R L+SG + I ++ Sbjct: 540 FLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWW----RSYLTSG----SSAIYLFLYAG 591 Query: 385 IYITAFVQLTSIISGKFWWTYLVIPAFGGYKIFFLLKGT 501 Y +Q+T ++SG ++ Y+++ +F FF+L GT Sbjct: 592 FYFFTKLQITKLVSGILFFGYMLLASFS----FFVLTGT 626
>AK058785:Os08g0555000 | Length = 279 Score = 28.9 bits (63), Expect = 5.0 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = +1 Query: 211 FTWKHWIGLVVTSA--AYFLSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDV 384 F + +I L++T A A L Y QL S + R L+SG + I ++ Sbjct: 173 FLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWW----RSYLTSG----SSAIYLFLYAG 224 Query: 385 IYITAFVQLTSIISGKFWWTYLVIPAFGGYKIFFLLKGT 501 Y +Q+T ++SG ++ Y+++ +F FF+L GT Sbjct: 225 FYFFTKLQITKLVSGILFFGYMLLASFS----FFVLTGT 259 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,413,985 Number of extensions: 583939 Number of successful extensions: 1738 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1732 Number of HSP's successfully gapped: 6 Length of query: 296 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 196 Effective length of database: 11,395,755 Effective search space: 2233567980 Effective search space used: 2233567980 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
