ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111h23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O14193:MUG69_SCHPO Meiotically up-regulated gene 69 protein - Sc... 51 7e-06
2Q99382:YL065_YEAST UPF0372 protein YLR065C - Saccharomyces cerev... 49 2e-05
3P0C198:CHK1_USTMA Serine/threonine-protein kinase CHK1 - Ustilag... 31 7.6
4Q60997:DMBT1_MOUSE Deleted in malignant brain tumors 1 protein p... 30 10.0
5Q91ZX1:C209A_MOUSE CD209 antigen-like protein A - Mus musculus (... 30 10.0

>O14193:MUG69_SCHPO Meiotically up-regulated gene 69 protein - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 192
 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
 Frame = +1

Query: 85  MANQGSKKIVERNRRRMDLLWRIILVSNVIYIVVRMAVMHSSFTWKHWIGLVVTSAAYFL 264
           MAN   KK+  +N+  +  +    L+ NV++ ++R  V      +  ++    + ++ FL
Sbjct: 1   MANAAQKKLAAQNKHILTFMLAADLIVNVLFWILRFFVRSGLSKFSKFVYAFASISSGFL 60

Query: 265 SYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDVIYIT-AFVQLTSIISGKFWW 441
            Y QL      +Y DA    LL  G D+   G++ Y+ D +Y +   + L ++ S K + 
Sbjct: 61  HY-QLHRAAAPKY-DA-RGSLLYVGQDLLQEGVTSYMVDYMYFSWILIFLAALTSVKVFA 117

Query: 442 TYLVIPAFGGYKIFFLLK 495
            YL++P F  YK   LLK
Sbjct: 118 FYLLVPIFVVYKAAPLLK 135



to top

>Q99382:YL065_YEAST UPF0372 protein YLR065C - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 181

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
 Frame = +1

Query: 85  MANQGSKKIVERNRRRMDLLWRIILVSNVIYIVVRMAVMHSSFTWKHWIGLVVTSAAYFL 264
           MA +  +K    N + +  L++   VS  + + +    +    T   WI LV  +   F+
Sbjct: 1   MAGKAGRKQASSNAKIIQGLYK--QVSLFLGMAIVRLFISRKVTIGQWIKLVALNVPMFV 58

Query: 265 SYKQLASMTKAEYSDADNRELLSSGYDMATG-GISEYIEDVIYITAF--VQLTSIISGKF 435
           +   +    K +Y   D   ++  G D+     +  Y  D+IY++ F  + + +  + KF
Sbjct: 59  ALYIIVLSGKPKY---DGNRVVKQGIDLNDNTNLISYFFDLIYLSLFGNIGIIAFRTFKF 115

Query: 436 WWTYLVIPAFGGYKIFFLLKGTFFSGGSE 522
           WW  L+ P + GYK++  LK  F  G  +
Sbjct: 116 WWCLLLCPIYAGYKLYG-LKNMFMPGAQQ 143



to top

>P0C198:CHK1_USTMA Serine/threonine-protein kinase CHK1 - Ustilago maydis (Smut|
           fungus)
          Length = 662

 Score = 30.8 bits (68), Expect = 7.6
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +1

Query: 262 LSYKQLASMTKAEYSDADNRELLSSGYDMATGGISEYIEDVIYITAFVQLTSI 420
           L+  Q  S  +AE+S   +     SGYDMA  G S++ + + + T F  LT +
Sbjct: 445 LAMSQHISSRRAEFSTTAS----GSGYDMALPGASQFTQALNHFTQFEALTHV 493



to top

>Q60997:DMBT1_MOUSE Deleted in malignant brain tumors 1 protein precursor - Mus musculus|
            (Mouse)
          Length = 2085

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 364  KSHQWPCHNPNSEVHDCPH 308
            +SH W CH+P   VH+C H
Sbjct: 1583 ESHLWNCHHPGWLVHNCRH 1601



to top

>Q91ZX1:C209A_MOUSE CD209 antigen-like protein A - Mus musculus (Mouse)|
          Length = 238

 Score = 30.4 bits (67), Expect = 10.0
 Identities = 10/35 (28%), Positives = 24/35 (68%)
 Frame = +3

Query: 420 YFWKILVDISSDTSFWWIQDFFPVERNILQWWFRG 524
           Y W  L+D+S +++++W+ D  P+  + +++W +G
Sbjct: 164 YTWMGLIDMSKESTWYWV-DGSPLTLSFMKYWSKG 197


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 156,366,042
Number of extensions: 3479994
Number of successful extensions: 9108
Number of sequences better than 10.0: 5
Number of HSP's gapped: 9099
Number of HSP's successfully gapped: 5
Length of query: 296
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 184
Effective length of database: 69,965,399
Effective search space: 12873633416
Effective search space used: 12873633416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top