ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf108n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P50492:AMA1_PLAF8 Apical membrane antigen 1 precursor - Plasmodi... 32 0.76
2P22621:AMA1_PLAFF Apical membrane antigen 1 precursor - Plasmodi... 32 0.99
3Q7SBU6:VID21_NEUCR Chromatin modification-related protein vid-21... 31 1.3
4P50490:AMA1_PLAFG Apical membrane antigen 1 precursor - Plasmodi... 31 1.3
5P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmo... 31 1.7
6P48620:FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplast pr... 31 1.7
7P50489:AMA1_PLAFC Apical membrane antigen 1 precursor - Plasmodi... 31 1.7
8P48621:FAD3C_SOYBN Omega-3 fatty acid desaturase, chloroplast pr... 30 2.2
9Q11184:LE756_CAEEL Protein let-756 - Caenorhabditis elegans 30 2.9
10P48619:FAD3C_RICCO Omega-3 fatty acid desaturase, chloroplast pr... 30 2.9
11Q51ZN8:ATG2_MAGGR Autophagy-related protein 2 - Magnaporthe gris... 30 2.9
12Q6EEF3:TTLL5_CERAE Tubulin--tyrosine ligase-like protein 5 - Cer... 30 3.7
13Q6BVY9:TIM50_DEBHA Import inner membrane translocase subunit TIM... 29 4.9
14Q68DN1:CB016_HUMAN Uncharacterized protein C2orf16 - Homo sapien... 29 4.9
15Q9Z0R7:TS1R2_RAT Taste receptor type 1 member 2 precursor - Ratt... 29 6.4
16P48626:FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic re... 29 6.4
17P48625:FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic re... 29 6.4
18P48618:FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplast pr... 29 6.4
19P46310:FAD3C_ARATH Omega-3 fatty acid desaturase, chloroplast pr... 29 6.4
20Q571B6:WHDC1_MOUSE WH2 domain-containing protein 1 - Mus musculu... 29 6.4
21P58874:OPT_BOVIN Opticin precursor - Bos taurus (Bovine) 29 6.4
22P20448:DBP4_YEAST ATP-dependent RNA helicase DBP4 - Saccharomyce... 28 8.4
23Q2TAC2:CCD57_HUMAN Coiled-coil domain-containing protein 57 - Ho... 28 8.4
24Q9BYB0:SHAN3_HUMAN SH3 and multiple ankyrin repeat domains prote... 28 8.4
25Q28G88:FEZF2_XENTR Fez family zinc finger protein 2 - Xenopus tr... 28 8.4

>P50492:AMA1_PLAF8 Apical membrane antigen 1 precursor - Plasmodium falciparum|
           (isolate 7G8)
          Length = 622
 Score = 32.0 bits (71), Expect = 0.76
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   EFTSLSHRDCGQ-HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSL 177
           EFT + +   GQ +  H +    +YHP+ E +          H EH  QQE   E+ ++L
Sbjct: 14  EFTYMINFGRGQNYWEHPYQKSDVYHPINEHREHSKEYEYPLHQEHTYQQEDSGEDENTL 73



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>P22621:AMA1_PLAFF Apical membrane antigen 1 precursor - Plasmodium falciparum|
           (isolate FC27 / Papua New Guinea)
          Length = 622

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   EFTSLSHRDCGQ-HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSL 177
           EFT + +   GQ +  H +    +YHP+ E +          H EH  QQE   E+ ++L
Sbjct: 14  EFTYMINFGRGQNYWEHPYQKSDVYHPINEHREHPKEYQYPLHQEHTYQQEDSGEDENTL 73



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>Q7SBU6:VID21_NEUCR Chromatin modification-related protein vid-21 - Neurospora crassa|
          Length = 2189

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 34   QHTIHRHSPRPIYHPMEERQADKMPASAQHHDEH-PKQQESPDEE 165
            QH  H+H   P   P ++ Q  +   S Q   +H P+QQ+ P ++
Sbjct: 1328 QHQQHQHQQHP-QQPQQQGQVQQQVVSQQQQQQHQPQQQQQPQQQ 1371



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>P50490:AMA1_PLAFG Apical membrane antigen 1 precursor - Plasmodium falciparum|
           (isolate FCR-3 / Gambia)
          Length = 622

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   EFTSLSHRDCGQ-HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSL 177
           EFT + +   GQ +  H +    +YHP+ E +          H EH  QQE   E+ ++L
Sbjct: 14  EFTYMINFGRGQNYWEHPYQKSGVYHPINEHREHPKEYEYPLHQEHTYQQEDSGEDENTL 73



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>P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmodium lophurae|
          Length = 351

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 37  HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEE 165
           H  H H     +HP E  +    P   +HH  HP++   P  E
Sbjct: 53  HPEHLHEEHHHHHPEEHHE----PHHEEHHHHHPEEHHEPHHE 91



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>P48620:FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplast precursor - Sesamum|
           indicum (Oriental sesame) (Gingelly)
          Length = 447

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSLSPTVAR 195
           H D G H IH   P+ P YH +E  +A K P   +++ E  K    P   +  L+ ++ R
Sbjct: 364 HHDIGTHVIHHLFPQIPHYHLIEATEAAK-PVLGKYYREPKKSAPLPFHLLGDLTRSLKR 422



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>P50489:AMA1_PLAFC Apical membrane antigen 1 precursor - Plasmodium falciparum|
           (isolate Camp / Malaysia)
          Length = 622

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 1   EFTSLSHRDCGQ-HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSL 177
           EFT + +   GQ +  H +    +YHP+ E +          H EH  QQE   E+ ++L
Sbjct: 14  EFTYMINFGRGQNYWEHPYQNSNVYHPINEHREHPKEYQYPLHQEHTYQQEDSGEDENTL 73



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>P48621:FAD3C_SOYBN Omega-3 fatty acid desaturase, chloroplast precursor - Glycine max|
           (Soybean)
          Length = 453

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESP 156
           H D G H IH   P+ P YH +E  +A K P   +++ E PK+  +P
Sbjct: 368 HHDIGTHVIHHLFPQIPHYHLVEATEAAK-PVFGKYYRE-PKKSAAP 412



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>Q11184:LE756_CAEEL Protein let-756 - Caenorhabditis elegans|
          Length = 425

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 55  SPRPIYHPMEERQADKMP--ASAQHHDEHPKQQESPDEE 165
           SPRP Y+P  +    + P   S  HH  HP+   S D +
Sbjct: 359 SPRPAYNPYWQSPVTQAPHHNSHHHHHHHPRVSSSSDPQ 397



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>P48619:FAD3C_RICCO Omega-3 fatty acid desaturase, chloroplast precursor - Ricinus|
           communis (Castor bean)
          Length = 460

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSL 177
           H D G H IH   P+ P YH +E  +A K P   +++ E  K    P   + SL
Sbjct: 374 HHDIGTHVIHHLFPQIPHYHLVEATEAAK-PVMGKYYREPKKSGPLPLHLLGSL 426



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>Q51ZN8:ATG2_MAGGR Autophagy-related protein 2 - Magnaporthe grisea (Rice blast|
           fungus) (Pyricularia grisea)
          Length = 2094

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 55  SPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSLSPT 186
           SP PI  P  +   +  P S+   + H ++ +SP+E ++   PT
Sbjct: 545 SPAPIIPPSSDGNTEAGPESSIQGERHDRKSQSPNECLTPREPT 588



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>Q6EEF3:TTLL5_CERAE Tubulin--tyrosine ligase-like protein 5 - Cercopithecus aethiops|
           (Green monkey) (Grivet)
          Length = 1295

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
 Frame = +1

Query: 34  QHTIHRHSPRPIYHPMEER-----QADKMPASAQHHDEHPKQQESP----DEEVSSL 177
           Q    R S RPIY   E       Q  + P  AQ H   PKQ+  P    D E+ +L
Sbjct: 396 QDPAQRASTRPIYPTFESSRRNPFQKPQRPLPAQFHSSEPKQRSRPLSASDAEMKNL 452



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>Q6BVY9:TIM50_DEBHA Import inner membrane translocase subunit TIM50, mitochondrial|
           precursor - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 471

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 325 FVPTCLYRRSNKTLGSLFPLLQVSVFQ 405
           F P  +Y R NK LGSLF      VF+
Sbjct: 149 FAPNLMYGRLNKRLGSLFTFFSEPVFE 175



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>Q68DN1:CB016_HUMAN Uncharacterized protein C2orf16 - Homo sapiens (Human)|
          Length = 1984

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +1

Query: 16   SHRDCGQHTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDE 162
            SHR  G      HSP    H    R++ + P+   HH    +   SP E
Sbjct: 1701 SHR--GPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSE 1747



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>Q9Z0R7:TS1R2_RAT Taste receptor type 1 member 2 precursor - Rattus norvegicus (Rat)|
          Length = 843

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 296 WTPASSSFASLCRLACTVGVIKRSAVYFPCC 388
           +TP ++   S+C  +C  G +K+S    PCC
Sbjct: 488 YTPNNTVPVSMCSKSCQPGQMKKSVGLHPCC 518



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>P48626:FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum - Nicotiana|
           tabacum (Common tobacco)
          Length = 379

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSLS 180
           H D G H IH   P+ P YH  E  +A K P   +++ E  K    P   V  L+
Sbjct: 294 HHDIGTHVIHHLFPQIPHYHLREATKAAK-PVLGKYYREPKKSGPIPFHLVKDLT 347



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>P48625:FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum - Glycine max|
           (Soybean)
          Length = 380

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESP 156
           H D G H IH   P+ P YH +E  QA K P    ++ E  +    P
Sbjct: 297 HHDIGTHVIHHLFPQIPHYHLVEATQAAK-PVLGDYYREPERSAPLP 342



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>P48618:FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplast precursor - Brassica|
           napus (Rape)
          Length = 404

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESP 156
           H D G H IH   P+ P YH +E  +A K P   +++ E  K    P
Sbjct: 318 HHDIGTHVIHHLFPQIPHYHLVEATEAAK-PVLGKYYREPDKSGPLP 363



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>P46310:FAD3C_ARATH Omega-3 fatty acid desaturase, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 446

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 19  HRDCGQHTIHRHSPR-PIYHPMEERQADKMPASAQHHDEHPKQQESP 156
           H D G H IH   P+ P YH +E  +A K P   +++ E  K    P
Sbjct: 360 HHDIGTHVIHHLFPQIPHYHLVEATEAAK-PVLGKYYREPDKSGPLP 405



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>Q571B6:WHDC1_MOUSE WH2 domain-containing protein 1 - Mus musculus (Mouse)|
          Length = 793

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -3

Query: 86  SSMGW*IGRGLWR--WMVCWP 30
           S  GW +GRGLW   W + WP
Sbjct: 105 SGAGWGLGRGLWALLWPLLWP 125



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>P58874:OPT_BOVIN Opticin precursor - Bos taurus (Bovine)|
          Length = 321

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = -3

Query: 395 ETCNKGNKLPSVLLLLRYKQVGTN*QSYSRLESTRSTERAKAKMSDEPSAAAFPPSAGLE 216
           E  + G++LP V         GT+  S +R   T+STE A+   S+  +A   PP+ GL 
Sbjct: 57  ELIDYGDQLPQVK--------GTSLASLTRTRFTQSTEAARTLPSNPTTAR--PPTLGLL 106

Query: 215 ATDSRTSLAT 186
           A  +   L T
Sbjct: 107 AAPANHGLPT 116



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>P20448:DBP4_YEAST ATP-dependent RNA helicase DBP4 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 770

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 79  MEERQADKMPASAQHHDEHPKQQESPDEEVSSLSPTVARLVRE 207
           + E QAD +P S Q HD     +    + ++ L P + +L RE
Sbjct: 64  LTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYRE 106



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>Q2TAC2:CCD57_HUMAN Coiled-coil domain-containing protein 57 - Homo sapiens (Human)|
          Length = 916

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 37  HTIHRHSPRPIYHPMEERQADKMPASAQHHDEHPKQQESPDEEVSSLSPTVARLV 201
           HT+   SPR      +E ++ K P + QH +EH +Q  S     S     + RL+
Sbjct: 789 HTVTCKSPR-----QKEDRSPKPPQAPQHPEEHGRQSHSSSSFASGTLQDMWRLL 838



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>Q9BYB0:SHAN3_HUMAN SH3 and multiple ankyrin repeat domains protein 3 - Homo sapiens|
           (Human)
          Length = 1741

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = -3

Query: 374 KLPSVLLLLRYKQVGTN*QSYSRLESTRSTERAKAKMSDEPSAAAFPPSAGLEATDSRTS 195
           + PS  L LR K +       + LE   S  R K +  DE  AAA  P+   +  D+ + 
Sbjct: 684 RAPSTTLTLRSKSMT------AELEELASIRRRKGEKLDEMLAAAAEPTLRPDIADADSR 737

Query: 194 LATV 183
            ATV
Sbjct: 738 AATV 741



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>Q28G88:FEZF2_XENTR Fez family zinc finger protein 2 - Xenopus tropicalis (Western|
           clawed frog) (Silurana tropicalis)
          Length = 435

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = -3

Query: 290 STERAKAKMSDEPSAAAFPPSAGLE 216
           S ER  AK S EP AAAF PS GL+
Sbjct: 31  SIERIMAKTS-EPKAAAFQPSQGLD 54


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 51,612,310
Number of extensions: 855781
Number of successful extensions: 3403
Number of sequences better than 10.0: 25
Number of HSP's gapped: 3383
Number of HSP's successfully gapped: 25
Length of query: 141
Length of database: 100,686,439
Length adjustment: 102
Effective length of query: 39
Effective length of database: 72,708,349
Effective search space: 2835625611
Effective search space used: 2835625611
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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